CsGy1G017950 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGGCATGTTGCTTTTGCTAGAGGTTTCATGCTTGAACGTGTTCTATTTATACCCACGTTACATCGTATTTTGATATATGTGTCTCAACTAATTGAAGATGCTACTTGTTTTACCTGGTTTGCACCTTCTTTACTGCTACAACCTTACATTCTGGAAATTTGATTGGCACCGGTCCACAAAAAAATGGACTCTATCGTTCTCGAGGAAGTTCTACAGTAGACTTTGGTGAAAGTTCCAGAATTATTAGAATTTGACTATGACATAGGAGATTGGGACACCCATCAGACAGAGTAGCAAATTTAATTACTGTCACTCATCTTAGTTGAATAAAAAAAAATTGGACAAAGCATGAGTCACTTGTCCTCCGACTGAAAGAAGTCGTGATAATTACTGTTAGTGACAGTAAAGCTAGCCGTATCTTTGAACTTATTGATTGTGATTTGTGGGAGCCATGTAACCAAACGGTCCAAACCCCATCTTCATATGGTGATCATTGTTTTTTATTACATTAGTCGATGATTTTTCAAGAGTTGTTTAACTGTACAAGATAAAACAGAAGTTTATATAGTTTTTCTTTCATTCTTTGCCATGATTGGATGTCAATTTGAAACCGCCCTTAAATTAGTGAGAAGTGAAAAGGGCTTTGGAAAATAAACCAACTTAGGTCAATGGAAGTCTTACCTCCGAGCAAGGAAGAAATTTCTTGTTAATTTTTAACAACCACAAGGTTGAGAATGTGTTGATTATAATGAAACTTTTGCCCTAATGGCCAAAATGGTAATTGGTCGAACATTTTTACCAGTCATAGCTGCAACCACAAGGTTAGATACGTGGTGTGTTGCCTCGTAACATCTTTATATAGATCTTTATATAGTTTACGTGAAGCTCCGAGGGGTTGGTTTTCTAGGTTGGCTACTTCACCAAATGATTTTCTTCACCTAGTTGGACATTTCTGATCCTCATGCTCCAACTTGGCCAGGATATTCAGAAATGTATTTTCTTATATAATATGATATATAATTTGTATATTTTTCTATTTATTTATTTTGATAGGTACATACTTTACTTCAATATGGGGTTGCCTATATATTCACCTCATCCAAAATAAAAACCTAAGGGAAATACCTTTCCTTGACCGTTAATTAAATTGGAGAATTCAATCTCTTATATATATATTATACATTTAAAAATAAAAGAGCTAAATTATTACAACCAAAGAGACATGAACTGAATTGTTGTTTTTCGGATAAAAAATATACCTTTTAACTTAAACCCTAACACAGTAAGAAAATTGAACTCTATTATTGTTCAACAGCTCTAGGAAAACAAATCAAGACTGCAAATCCATGAAAAAATAACTCATGGGTTTGGTTCATTTACAATTAGTAACCTACCAAACTCCTTCATGGAGCATTGGTCAGTCATATTAATGAAATTTGTCAATCCAAGTTCTGAGTTTGTGACATTAAGATCAGTTTAGGAGTAACAAAAGCTATGGATGAAAAAACAATTGAAAGTTTTTTTTCCTTCCAGGAAACAGGAACTGTCAAGAGGAAATTACAAATGATGAAGCAAAAGAAGATGAGCCTAATAGCAGAAGTCAGGTATAATCTTCATATTATTACTTTTTATTTTTGTTGATCTTCACAAGGAGTAAGTGAATTGTTTAGAACTAAATAAGAGTCTATGTTTATGTTGAAGATTCTTAAGGAAGAGATGTGAGTACTTAATGAAGAACCAACCATCAACAAAAGAGACCATTATTCAAATGGAGAGACAGTGCAGCAGAAGCAATTGAAAAATCAAGTGGCTAACAATAATAAGGAGAAGAATGGTGGTAGAAGAAGAACTGCTTTGAAACCGATCCCGACCATCTCAGATATAAACCAAAAGGAAAGAATCGATATGCCTCTGCAGAATTCTACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGACTTCTTCTAGGAAGAAAGCCAGTCAACATAACTCGACCCCGGTTTTCGACTTGAACCAGAAGGAAAGAATGTGCAGTGGGAGAGATGCTAGCGAGAGAAACATCACTCCATTTTTTGACTTGAACCAAATTTCGGTAACTGATAGGAACTTATGATAGCTAAACTCTACAAATGTAATTTTTCACTACAATCTTGACCACCCCCCTTCCTAACAATCTCTATATTTATTTTGGTTCAGATAGAGGAAGAGGAATTGCAGACCCATTACGAGCCGCTGAGAGTTGATGAGCTGAAGAAAAGCCTTCTTCGAGGAGGGAACGATGAGCAGCAAAACGATATCAAGATTTCTGCATGCAGGAGTATTGGAGATGGTCCAAGTCGAGCTGGTAAAAGAAAAATTTCATGGCAAGATCAG ATGGAAGGGCATGTTGCTTTTGCTAGAGGAAACAGGAACTGTCAAGAGGAAATTACAAATGATGAAGCAAAAGAAGATGAGCCTAATAGCAGAAGTCAGAATTCTACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGACTTCTTCTAGGAAGAAAGCCAGTCAACATAACTCGACCCCGGTTTTCGACTTGAACCAGAAGGAAAGAATGTGCAGTGGGAGAGATGCTAGCGAGAGAAACATCACTCCATTTTTTGACTTGAACCAAATTTCGATAGAGGAAGAGGAATTGCAGACCCATTACGAGCCGCTGAGAGTTGATGAGCTGAAGAAAAGCCTTCTTCGAGGAGGGAACGATGAGCAGCAAAACGATATCAAGATTTCTGCATGCAGGAGTATTGGAGATGGTCCAAGTCGAGCTGGTAAAAGAAAAATTTCATGGCAAGATCAG ATGGAAGGGCATGTTGCTTTTGCTAGAGGAAACAGGAACTGTCAAGAGGAAATTACAAATGATGAAGCAAAAGAAGATGAGCCTAATAGCAGAAGTCAGAATTCTACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGACTTCTTCTAGGAAGAAAGCCAGTCAACATAACTCGACCCCGGTTTTCGACTTGAACCAGAAGGAAAGAATGTGCAGTGGGAGAGATGCTAGCGAGAGAAACATCACTCCATTTTTTGACTTGAACCAAATTTCGATAGAGGAAGAGGAATTGCAGACCCATTACGAGCCGCTGAGAGTTGATGAGCTGAAGAAAAGCCTTCTTCGAGGAGGGAACGATGAGCAGCAAAACGATATCAAGATTTCTGCATGCAGGAGTATTGGAGATGGTCCAAGTCGAGCTGGTAAAAGAAAAATTTCATGGCAAGATCAG MEGHVAFARGNRNCQEEITNDEAKEDEPNSRSQNSTPIPVLDLNQKAKTSSRKKASQHNSTPVFDLNQKERMCSGRDASERNITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGDGPSRAGKRKISWQDQ
BLAST of CsGy1G017950 vs. NCBI nr
Match: KGN65169.1 (hypothetical protein Csa_1G256780 [Cucumis sativus]) HSP 1 Score: 149.4 bits (376), Expect = 9.6e-33 Identity = 114/120 (95.00%), Postives = 114/120 (95.00%), Query Frame = 0
BLAST of CsGy1G017950 vs. NCBI nr
Match: XP_011648472.1 (PREDICTED: uncharacterized protein LOC101209712 [Cucumis sativus]) HSP 1 Score: 149.4 bits (376), Expect = 9.6e-33 Identity = 114/120 (95.00%), Postives = 114/120 (95.00%), Query Frame = 0
BLAST of CsGy1G017950 vs. NCBI nr
Match: XP_008443848.1 (PREDICTED: uncharacterized protein LOC103487344 [Cucumis melo]) HSP 1 Score: 147.9 bits (372), Expect = 2.8e-32 Identity = 118/133 (88.72%), Postives = 120/133 (90.23%), Query Frame = 0
BLAST of CsGy1G017950 vs. NCBI nr
Match: KGN65170.1 (hypothetical protein Csa_1G256785 [Cucumis sativus]) HSP 1 Score: 141.4 bits (355), Expect = 2.6e-30 Identity = 80/120 (66.67%), Postives = 80/120 (66.67%), Query Frame = 0
BLAST of CsGy1G017950 vs. NCBI nr
Match: XP_022921741.1 (uncharacterized protein LOC111429897 [Cucurbita moschata]) HSP 1 Score: 128.6 bits (322), Expect = 1.8e-26 Identity = 101/120 (84.17%), Postives = 101/120 (84.17%), Query Frame = 0
BLAST of CsGy1G017950 vs. TAIR10
Match: AT5G57910.1 (unknown protein) HSP 1 Score: 40.8 bits (94), Expect = 8.7e-04 Identity = 25/59 (42.37%), Postives = 35/59 (59.32%), Query Frame = 0
BLAST of CsGy1G017950 vs. TrEMBL
Match: tr|A0A0A0LW13|A0A0A0LW13_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256780 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 6.3e-33 Identity = 114/120 (95.00%), Postives = 114/120 (95.00%), Query Frame = 0
BLAST of CsGy1G017950 vs. TrEMBL
Match: tr|A0A1S3B8I5|A0A1S3B8I5_CUCME (uncharacterized protein LOC103487344 OS=Cucumis melo OX=3656 GN=LOC103487344 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.8e-32 Identity = 118/133 (88.72%), Postives = 120/133 (90.23%), Query Frame = 0
BLAST of CsGy1G017950 vs. TrEMBL
Match: tr|A0A0A0LTB8|A0A0A0LTB8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256785 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 1.7e-30 Identity = 80/120 (66.67%), Postives = 80/120 (66.67%), Query Frame = 0
BLAST of CsGy1G017950 vs. TrEMBL
Match: tr|A0A2N9FY82|A0A2N9FY82_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19616 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 9.2e-16 Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 0
BLAST of CsGy1G017950 vs. TrEMBL
Match: tr|A0A2R6QIB1|A0A2R6QIB1_ACTCH (Serine/threonine-protein kinase irlE OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc18683 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 4.6e-15 Identity = 41/61 (67.21%), Postives = 53/61 (86.89%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |