CsGy1G017550 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G017550
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	WD repeat-containing protein 76 isoform X1
Location	Chr1 : 15758245 .. 15762590 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACTTTTGTTAGATGTAATTTACAACCATTTTTAATTACATTCTTTAAAGCTCAGTATTTGGTGAATTACAAGGGAAAAAAATAAAATTAAATGGACTTAAAAAAATATAATTTGTGACGACCAAAGTTATGAAATGATAATATATATAAATTTATAATTGAAGAAATATATTTTAACCACAGCATGGGAGTGACGTGGCGATTAAATGACAACGTAGTGTCTGAAGTCCCGCCGTAGTGTATTTTCCCGCAATGCCAACGGTATGTAAAATCTCTTACAAATTTCCGAATTTCCCTTCTCCTTCTCCTTCTGCCCTAAAACCCTTTCCCTTTTCCATGGCTTCTCAAGCTCTCACTGACTACGAGCGACAAAGGCTCGAGAACATTCGCCGCAACGATGAAATGTTGGCCGCTCTCAAGCTCCAATCCAAAGCTTCTGAACTCTCCGCTGCTTCCAAGCGTCAAAGGTATCTTTCCCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTATTGATCTCTTTATCCTACTTTGTTTTGTTCTGTTTTGTTTTTGATCCCTTTGTTATTCCCATTCCAGAGTTGAAACCAAATCGGAAAAGGTTTATCCGAAAACCAAACCTAAAAAAGAGACTCCGATGGTTTTACGACGTTCTTTGCGCGCTCGAGGAATTCCTCCCGATGCAAAAAGCTTGTAGATATAGATGATCTTACGGAGTCAGCTACTAAGATTCGGAAGTCAGAAACCAAGTCCATGTCTTCGCCTCGTGTTTTAGGCCCCCTTGAAATGATTGAAGTTTGTAGTGAGAGGGAGTCTCATCCGTCTTTGATTGAATCTATTTTGGGTGTTTTGAGTAAGTCTCTGTTGAGTAGGTCAGGGAAAGAGGAATTAGTTGATGATGTTAAGGAATTTAAATTGGGGGAAAGGAATGGGAATTTCTCGAATGAGGTAGAGATTGAAGGAGGGGGAGATGGGAATTGTTTGAAGATGGATCCTATTGATAATTATTCGAATTTAATTAAAAGGGTGACTGAAGGACTTATCAGTGACGTTAAAGATCCCTTGCTGAGTTCGATTAAAATGGAACATAAGAATGATGGAAGTTGCTTAAAGCCTGCATCTTTGGTTCTTAATGCCGACAACATAGCTCGGGTTGTGCCTGGGAGAATAATGGCCGTGAGGTTTTTCCCTTGTCTTGATTCTAAAATGATCGTTGTAGGTAACAAGTTTGGGGAAGTCGGGTTCTGGAATGCTGATCACGAGGGAGAGGAAGGAAATGGAGTTTATTTATATCACCCCCATTCGGGTCCCATTTCTGGGATTTCAATTCAACGACATGCATTGTCGAAGGTACCATTTATCCAGGAGATTCTAGGAAGATTTTAAAGATGAAGAATAATTTTTTAATTTGATTTTTTGAAATATCTGTTATTTTTTATGAGCTGTTAGAATGAAAAGCTCTGGGTTCTTGCGTACAACAATTTATACTGTGTGAAAAAGATATTGTTTTCTCCATAGATTTTATCGTCAAAGTCCATTCTCTTACTTTTTGCTGAGTTCAATTATGTGATCCTACGTTTCTAGGTAAGTTATCATTGTAATGGAAAAGGTTCAGTTAGGCATATGAGGAAGAAGTTTTCATGTATCAGTATAGTTTCAGTTAATTGTAGAATTCCTTCTCTAGTTGTTTCCTATGCTTCCGTATTCAAAATGGTATTTCTCAGTAGTCAGTTGTGAACCAGGTATTTGACCAAATAAGATAATAGTTTTGGCCTGTGCATGAGTGATTGGAAAATGCATTTTTTTAATTAAGGAGAACCCATCTGTGGATATGTTTGGATCAGACTTTGCAAGGAGCTTTACATCTACTCCAGTCGTTTTCTTTGTTAGAATATTTTTTTTATGGTTTAAAACATTAGTTCTGAATTTTGCATCTGTTTTTATTCTGGTATTATGCAATTAGTTTTGGTATGCTAATGATGATTCTTGTGTAATGATTGCAGGTTTATACCAGCTGCTATGATGGATTTATACGATTGATGGATGTAGAGAAAGAGATGTTTGATCTTGTATATCGTAATGAAGATACTATATTTTCTCTCTCTCAACAATCAAATGATGCAAACTGCTTATATTTTTCTGAGGGTCGTGGAGGGTTGAATATATGGGATAAAAGGACTGGAAACTGCACAATGGAATGGACGTTGCATGAAGATAGGATCAATTCCATCGATTTTAATGTAGGCAATAGCAACATTATGGCTACGAGTTCCAGTGATGGAACTGCCTGTATTTGGGATTTGAGAAGTGTTAGTGATGAAAAGCCCCAAACCTTGAAGACAATCACCCACAAAAGGGCGATTCATTCTGCTTACTTCTCACCCTCTGGACGCTTCCTTGCAACTACTAGGTAAGTTGATCATCTTTTGAAACTTTTTTATAGGAAAACAGTAGTAATAGAATCAGCAAAAGGGTAAAAGAGAATAAATTAACAATGTGTCCTATAGCTCAGTTTCATTAATGTGTCCTAAGACGGTAGAATTTTCTGTCAACTATTTTGAAATTACAGTTTCGTATCATTTTCTTTTTTTAATTTAGAGTTCAAGCTTTCATTTCAAACGATGGGTTTGTTATTGTTACAACAATGATTGTTTATGGTGAGGCGACCATGAATTCTTCTAGGCAGTAAAACTTTCTAAATGTTGTACACTTAGTATTTTGAAATTGCGCTTTGTGCATTTAATTAAAACCGAGGCTCTTTTATTGTTACGTCAGAAGAATGATGAATTTTTCTCAATTCCACCTCCCCTCCGTCTCCCCCAAAGCACCGAAATTAGGCAGGTGCAGTAGTAGGTAGGATTTTAATGGCTTAGTAGTATTATTTAATAGTTGTGAGATTAATTGGTTTCATTTCATTTAGTTTTGACGACACTGTTGGTATATATGGTGGAGTCAACTTTAAAGATACTTCGCTAATACCGCATGATAATCAGACAGGCAGATGGATTTCTTCTTTCAGGCAAGTTTTGTAACCCTGTCCTTGTCACTTACCTTTTATTTTTCCCCTTTCCATTTCCATCTAAAATTTACTTGTGCGATTCACCTTGCTCTACTCATTGAGATATTTTAAATATATATGAATGACTAATTTTCTGGTTATGTTGATATCAAAATTCGAATCTTGTGTCAAAAGAATGAAAATGTCTTTCTAATATCTTTTATTAAGCATCTAATTTTCTTATTTTGTTCAATCTCAAACGTTTGATGATCATATCCTTATATATATGAATGATTTATTGCATAAAGTAGTTGGATTTTCAGATGCCCCTGCATCACACGTATAAGAGTATCTTCAATGATTATTTGTTCCTACAATTAGGACTTAAGCGTGGTTCTTGGGCTGAATTATTAGTGTATTGTTTTCGTGTTGTCCTCTAATTGCCATTTTTATTTTAACGTTTATGGTAAGTAGGCTTCAGTTGTTTTTTCCCATCTATTAGAAGATTAACGACATTCTATCTATTTGGAAGCAGAGCAATATGGGGTTGGGACGACTCGTACATTTTCATTGGAAATATGAAGAGAGCAGTAGATGTTATTTCACGGGCATATCGGAAAAGAGTGTTCGTTTTGCAGAGCCCCAAAATATCGGCAATACCTTGCAGGTTCGATGCACATCCTTACGATGTTGGAACATTAGCAGGAGCCACTAGTGGGGGACAGGTTTATATGTGGACAATGAGTCCAGATATATAATTTGCTTGTGGTAGAGTTCTCAGGATAAGAATTTTGGATAGAATAAGAATTTTGGATAGAATGAGAATTTTGTACATGAATTCCATCCATCTCCGGTGCTGATATCCGACAAATACTTTCTGAGGTAGAAGAGATGCTTTAACCTCTCCTTGCAATTGGATTTCATGGGATGAATCTTGTAGATTTTTTGTCTTTCCTTTTTTTATACAAAAAAGGGATAAAGTTTAACATCTTGTAGCCAATTACAATGTTGGTATTTACTTTGAGAAGTGTTGGAAACTTTGCTTAAATCAGCTTTTGATGTATAAAGTTTTATGCAATTTTCTTTGGCTAGTAGACTACTTGTGTTAAAGAGAGTGTTTCCATTTGAAGTGATTCCTTATTAGAAAGTAGTGGAAAAACTCTTTACAATGGCGTGTAAACATGGGATGTTAAAGTTGATGTTCTTTAGGAGAGACATTGAAATATTCAAAAGCCGTAGAAACGTCTCTCAAAAACTGATTTAAGAAACACCTCTCAAAAGACTATGATTTCTTTTATTCCAAAGCAGCTAGAAGAAGAAGAAA

mRNA sequence

CAAACTTTTGTTAGATGTAATTTACAACCATTTTTAATTACATTCTTTAAAGCTCAGTATTTGGTGAATTACAAGGGAAAAAAATAAAATTAAATGGACTTAAAAAAATATAATTTGTGACGACCAAAGTTATGAAATGATAATATATATAAATTTATAATTGAAGAAATATATTTTAACCACAGCATGGGAGTGACGTGGCGATTAAATGACAACGTAGTGTCTGAAGTCCCGCCGTAGTGTATTTTCCCGCAATGCCAACGGTATGTAAAATCTCTTACAAATTTCCGAATTTCCCTTCTCCTTCTCCTTCTGCCCTAAAACCCTTTCCCTTTTCCATGGCTTCTCAAGCTCTCACTGACTACGAGCGACAAAGGCTCGAGAACATTCGCCGCAACGATGAAATGTTGGCCGCTCTCAAGCTCCAATCCAAAGCTTCTGAACTCTCCGCTGCTTCCAAGCGTCAAAGAGTTGAAACCAAATCGGAAAAGGTTTATCCGAAAACCAAACCTAAAAAAGAGACTCCGATGGTTTTACGACGTTCTTTGCGCGCTCGAGGAATTCCTCCCGATGCAAAAAGCTTGTAGATATAGATGATCTTACGGAGTCAGCTACTAAGATTCGGAAGTCAGAAACCAAGTCCATGTCTTCGCCTCGTGTTTTAGGCCCCCTTGAAATGATTGAAGTTTGTAGTGAGAGGGAGTCTCATCCGTCTTTGATTGAATCTATTTTGGGTGTTTTGAGTAAGTCTCTGTTGAGTAGGTCAGGGAAAGAGGAATTAGTTGATGATGTTAAGGAATTTAAATTGGGGGAAAGGAATGGGAATTTCTCGAATGAGGTAGAGATTGAAGGAGGGGGAGATGGGAATTGTTTGAAGATGGATCCTATTGATAATTATTCGAATTTAATTAAAAGGGTGACTGAAGGACTTATCAGTGACGTTAAAGATCCCTTGCTGAGTTCGATTAAAATGGAACATAAGAATGATGGAAGTTGCTTAAAGCCTGCATCTTTGGTTCTTAATGCCGACAACATAGCTCGGGTTGTGCCTGGGAGAATAATGGCCGTGAGGTTTTTCCCTTGTCTTGATTCTAAAATGATCGTTGTAGGTAACAAGTTTGGGGAAGTCGGGTTCTGGAATGCTGATCACGAGGGAGAGGAAGGAAATGGAGTTTATTTATATCACCCCCATTCGGGTCCCATTTCTGGGATTTCAATTCAACGACATGCATTGTCGAAGGTTTATACCAGCTGCTATGATGGATTTATACGATTGATGGATGTAGAGAAAGAGATGTTTGATCTTGTATATCGTAATGAAGATACTATATTTTCTCTCTCTCAACAATCAAATGATGCAAACTGCTTATATTTTTCTGAGGGTCGTGGAGGGTTGAATATATGGGATAAAAGGACTGGAAACTGCACAATGGAATGGACGTTGCATGAAGATAGGATCAATTCCATCGATTTTAATGTAGGCAATAGCAACATTATGGCTACGAGTTCCAGTGATGGAACTGCCTGTATTTGGGATTTGAGAAGTGTTAGTGATGAAAAGCCCCAAACCTTGAAGACAATCACCCACAAAAGGGCGATTCATTCTGCTTACTTCTCACCCTCTGGACGCTTCCTTGCAACTACTAGTTTTGACGACACTGTTGGTATATATGGTGGAGTCAACTTTAAAGATACTTCGCTAATACCGCATGATAATCAGACAGGCAGATGGATTTCTTCTTTCAGAGCAATATGGGGTTGGGACGACTCGTACATTTTCATTGGAAATATGAAGAGAGCAGTAGATGTTATTTCACGGGCATATCGGAAAAGAGTGTTCGTTTTGCAGAGCCCCAAAATATCGGCAATACCTTGCAGGTTCGATGCACATCCTTACGATGTTGGAACATTAGCAGGAGCCACTAGTGGGGGACAGGTTTATATGTGGACAATGAGTCCAGATATATAATTTGCTTGTGGTAGAGTTCTCAGGATAAGAATTTTGGATAGAATAAGAATTTTGGATAGAATGAGAATTTTGTACATGAATTCCATCCATCTCCGGTGCTGATATCCGACAAATACTTTCTGAGGTAGAAGAGATGCTTTAACCTCTCCTTGCAATTGGATTTCATGGGATGAATCTTGTAGATTTTTTGTCTTTCCTTTTTTTATACAAAAAAGGGATAAAGTTTAACATCTTGTAGCCAATTACAATGTTGGTATTTACTTTGAGAAGTGTTGGAAACTTTGCTTAAATCAGCTTTTGATGTATAAAGTTTTATGCAATTTTCTTTGGCTAGTAGACTACTTGTGTTAAAGAGAGTGTTTCCATTTGAAGTGATTCCTTATTAGAAAGTAGTGGAAAAACTCTTTACAATGGCGTGTAAACATGGGATGTTAAAGTTGATGTTCTTTAGGAGAGACATTGAAATATTCAAAAGCCGTAGAAACGTCTCTCAAAAACTGATTTAAGAAACACCTCTCAAAAGACTATGATTTCTTTTATTCCAAAGCAGCTAGAAGAAGAAGAAA

Coding sequence (CDS)

ATGCCAACGGTATGTAAAATCTCTTACAAATTTCCGAATTTCCCTTCTCCTTCTCCTTCTGCCCTAAAACCCTTTCCCTTTTCCATGGCTTCTCAAGCTCTCACTGACTACGAGCGACAAAGGCTCGAGAACATTCGCCGCAACGATGAAATGTTGGCCGCTCTCAAGCTCCAATCCAAAGCTTCTGAACTCTCCGCTGCTTCCAAGCGTCAAAGAGTTGAAACCAAATCGGAAAAGGTTTATCCGAAAACCAAACCTAAAAAAGAGACTCCGATGGTTTTACGACGTTCTTTGCGCGCTCGAGGAATTCCTCCCGATGCAAAAAGCTTGTAG

Protein sequence

MPTVCKISYKFPNFPSPSPSALKPFPFSMASQALTDYERQRLENIRRNDEMLAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKKETPMVLRRSLRARGIPPDAKSL

Homology

[Close]

BLAST of CsGy1G017550 vs. NCBI nr
Match: XP_011655849.1 (PREDICTED: WD repeat-containing protein 76 isoform X1 [Cucumis sativus] >KGN65224.1 hypothetical protein Csa_1G267200 [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 1.5e-32
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 29  MASQALTDYERQRLENIRRNDEMLAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKK 88
           MASQALTDYERQRLENIRRNDEMLAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKK
Sbjct: 1   MASQALTDYERQRLENIRRNDEMLAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKK 60

Query: 89  ETPMVLRRSLRARGIPPDAKSL 111
           ETPMVLRRSLRARGIPPDAK L
Sbjct: 61  ETPMVLRRSLRARGIPPDAKKL 82

[Close]

BLAST of CsGy1G017550 vs. NCBI nr
Match: XP_011655856.1 (PREDICTED: WD repeat-containing protein 76 isoform X2 [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 1.5e-32
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 29  MASQALTDYERQRLENIRRNDEMLAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKK 88
           MASQALTDYERQRLENIRRNDEMLAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKK
Sbjct: 1   MASQALTDYERQRLENIRRNDEMLAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKK 60

Query: 89  ETPMVLRRSLRARGIPPDAKSL 111
           ETPMVLRRSLRARGIPPDAK L
Sbjct: 61  ETPMVLRRSLRARGIPPDAKKL 82

[Close]

BLAST of CsGy1G017550 vs. NCBI nr
Match: XP_008443893.1 (PREDICTED: WD repeat-containing protein 76 isoform X1 [Cucumis melo])

HSP 1 Score: 145.6 bits (366), Expect = 1.0e-31
Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 0


Query: 29  MASQALTDYERQRLENIRRNDEMLAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKK 88
           MASQALTDYERQRLENIRRNDEM+AALKLQSKASELSAASKRQRVETKSEKVYPKTKPK 
Sbjct: 1   MASQALTDYERQRLENIRRNDEMMAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKN 60

Query: 89  ETPMVLRRSLRARGIPPDAKSL 111
           ETPMVLRRSLRARGIPPDAK L
Sbjct: 61  ETPMVLRRSLRARGIPPDAKKL 82

[Close]

BLAST of CsGy1G017550 vs. NCBI nr
Match: XP_008443894.1 (PREDICTED: WD repeat-containing protein 76 isoform X2 [Cucumis melo])

HSP 1 Score: 145.6 bits (366), Expect = 1.0e-31
Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 0


Query: 29  MASQALTDYERQRLENIRRNDEMLAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKK 88
           MASQALTDYERQRLENIRRNDEM+AALKLQSKASELSAASKRQRVETKSEKVYPKTKPK 
Sbjct: 1   MASQALTDYERQRLENIRRNDEMMAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKN 60

Query: 89  ETPMVLRRSLRARGIPPDAKSL 111
           ETPMVLRRSLRARGIPPDAK L
Sbjct: 61  ETPMVLRRSLRARGIPPDAKKL 82

[Close]

BLAST of CsGy1G017550 vs. NCBI nr
Match: XP_022921833.1 (WD repeat-containing protein 76 isoform X1 [Cucurbita moschata] >XP_022921835.1 WD repeat-containing protein 76 isoform X2 [Cucurbita moschata])

HSP 1 Score: 139.0 bits (349), Expect = 9.4e-30
Identity = 75/82 (91.46%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 29  MASQALTDYERQRLENIRRNDEMLAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKK 88
           MASQALT+YER+RLENIRRNDEM+AALKLQSKASELSAASKRQRVETKSEKVYPKTKPK 
Sbjct: 1   MASQALTEYERKRLENIRRNDEMMAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKI 60

Query: 89  ETPMVLRRSLRARGIPPDAKSL 111
           +TP+VLRRSLRARGIPPDAKS+
Sbjct: 61  DTPIVLRRSLRARGIPPDAKSV 82

[Close]

BLAST of CsGy1G017550 vs. TAIR10
Match: AT1G80710.1 (DROUGHT SENSITIVE 1)

HSP 1 Score: 74.7 bits (182), Expect = 3.9e-14
Identity = 45/77 (58.44%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 35  TDYERQRLENIRRNDEMLAALKLQSKASELSAASKRQRVETKSEKVYPKTKPK-KETPMV 94
           T+YER+RLENIRRNDEMLAAL +++KAS L +A+KR R ++KS   + K KPK   TP V
Sbjct: 3   TEYERKRLENIRRNDEMLAALNVRAKASSLLSAAKRSRDDSKS---FKKKKPKPASTPTV 62

Query: 95  LRRSLRARGIPPDAKSL 111
           +R SLR RG+ PD+  L
Sbjct: 63  IRMSLRTRGLNPDSAGL 76

[Close]

BLAST of CsGy1G017550 vs. TrEMBL
Match: tr|A0A0A0LW60|A0A0A0LW60_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G267200 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.0e-32
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 29  MASQALTDYERQRLENIRRNDEMLAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKK 88
           MASQALTDYERQRLENIRRNDEMLAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKK
Sbjct: 1   MASQALTDYERQRLENIRRNDEMLAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKK 60

Query: 89  ETPMVLRRSLRARGIPPDAKSL 111
           ETPMVLRRSLRARGIPPDAK L
Sbjct: 61  ETPMVLRRSLRARGIPPDAKKL 82

[Close]

BLAST of CsGy1G017550 vs. TrEMBL
Match: tr|A0A1S3B9X1|A0A1S3B9X1_CUCME (WD repeat-containing protein 76 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487377 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.6e-32
Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 0


Query: 29  MASQALTDYERQRLENIRRNDEMLAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKK 88
           MASQALTDYERQRLENIRRNDEM+AALKLQSKASELSAASKRQRVETKSEKVYPKTKPK 
Sbjct: 1   MASQALTDYERQRLENIRRNDEMMAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKN 60

Query: 89  ETPMVLRRSLRARGIPPDAKSL 111
           ETPMVLRRSLRARGIPPDAK L
Sbjct: 61  ETPMVLRRSLRARGIPPDAKKL 82

[Close]

BLAST of CsGy1G017550 vs. TrEMBL
Match: tr|A0A1S3B9V4|A0A1S3B9V4_CUCME (WD repeat-containing protein 76 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487377 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.6e-32
Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 0


Query: 29  MASQALTDYERQRLENIRRNDEMLAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKK 88
           MASQALTDYERQRLENIRRNDEM+AALKLQSKASELSAASKRQRVETKSEKVYPKTKPK 
Sbjct: 1   MASQALTDYERQRLENIRRNDEMMAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKN 60

Query: 89  ETPMVLRRSLRARGIPPDAKSL 111
           ETPMVLRRSLRARGIPPDAK L
Sbjct: 61  ETPMVLRRSLRARGIPPDAKKL 82

[Close]

BLAST of CsGy1G017550 vs. TrEMBL
Match: tr|M5WEW4|M5WEW4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G257900 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.4e-20
Identity = 56/82 (68.29%), Postives = 70/82 (85.37%), Query Frame = 0


Query: 29  MASQALTDYERQRLENIRRNDEMLAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKK 88
           MAS  LTDYER+RLENIRRND+M+A+LKL S A+++SA++KR R ETKS KV PK +PK 
Sbjct: 1   MASPELTDYERKRLENIRRNDQMMASLKLHSIAAQVSASTKRPRAETKSYKVCPKKQPKT 60

Query: 89  ETPMVLRRSLRARGIPPDAKSL 111
           +TP+V+RRSLR RG+PPDAK L
Sbjct: 61  QTPIVIRRSLRTRGLPPDAKGL 82

[Close]

BLAST of CsGy1G017550 vs. TrEMBL
Match: tr|A0A251NIW9|A0A251NIW9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G257900 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.4e-20
Identity = 56/82 (68.29%), Postives = 70/82 (85.37%), Query Frame = 0


Query: 29  MASQALTDYERQRLENIRRNDEMLAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKK 88
           MAS  LTDYER+RLENIRRND+M+A+LKL S A+++SA++KR R ETKS KV PK +PK 
Sbjct: 1   MASPELTDYERKRLENIRRNDQMMASLKLHSIAAQVSASTKRPRAETKSYKVCPKKQPKT 60

Query: 89  ETPMVLRRSLRARGIPPDAKSL 111
           +TP+V+RRSLR RG+PPDAK L
Sbjct: 61  QTPIVIRRSLRTRGLPPDAKGL 82

The following BLAST results are available for this feature:

BLAST of CsGy1G017550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655849.1	1.5e-32	98.78	PREDICTED: WD repeat-containing protein 76 isoform X1 [Cucumis sativus] >KGN6522...	[more]
XP_011655856.1	1.5e-32	98.78	PREDICTED: WD repeat-containing protein 76 isoform X2 [Cucumis sativus]	[more]
XP_008443893.1	1.0e-31	96.34	PREDICTED: WD repeat-containing protein 76 isoform X1 [Cucumis melo]	[more]
XP_008443894.1	1.0e-31	96.34	PREDICTED: WD repeat-containing protein 76 isoform X2 [Cucumis melo]	[more]
XP_022921833.1	9.4e-30	91.46	WD repeat-containing protein 76 isoform X1 [Cucurbita moschata] >XP_022921835.1 ...	[more]

BLAST of CsGy1G017550 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G80710.1	3.9e-14	58.44	DROUGHT SENSITIVE 1	[more]

BLAST of CsGy1G017550 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy1G017550 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LW60\|A0A0A0LW60_CUCSA	1.0e-32	98.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G267200 PE=4 SV=1	[more]
tr\|A0A1S3B9X1\|A0A1S3B9X1_CUCME	6.6e-32	96.34	WD repeat-containing protein 76 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034873...	[more]
tr\|A0A1S3B9V4\|A0A1S3B9V4_CUCME	6.6e-32	96.34	WD repeat-containing protein 76 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034873...	[more]
tr\|M5WEW4\|M5WEW4_PRUPE	3.4e-20	68.29	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G257900 PE=4 SV=1	[more]
tr\|A0A251NIW9\|A0A251NIW9_PRUPE	3.4e-20	68.29	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G257900 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006974	cellular response to DNA damage stimulus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G017550.1	CsGy1G017550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..91
None	No IPR available	PANTHER	PTHR14773	UNCHARACTERIZED	coord: 30..107

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G017550	Cla018706	Watermelon (97103) v1	cgybwmB079
CsGy1G017550	Csa1G267200	Cucumber (Chinese Long) v2	cgybcuB003
CsGy1G017550	MELO3C010252	Melon (DHL92) v3.5.1	cgybmeB049
CsGy1G017550	ClCG06G012120	Watermelon (Charleston Gray)	cgybwcgB063
CsGy1G017550	CSPI01G17360	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G017550	CmaCh10G004860	Cucurbita maxima (Rimu)	cgybcmaB014
CsGy1G017550	CmoCh10G005200	Cucurbita moschata (Rifu)	cgybcmoB014
CsGy1G017550	Cp4.1LG18g05520	Cucurbita pepo (Zucchini)	cgybcpeB040
CsGy1G017550	MELO3C010252.2	Melon (DHL92) v3.6.1	cgybmedB045
CsGy1G017550	CsaV3_1G028610	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G017550	Cla97C06G121310	Watermelon (97103) v2	cgybwmbB063
CsGy1G017550	Bhi02G000720	Wax gourd	cgybwgoB093
CsGy1G017550	Carg09975	Silver-seed gourd	carcgybB0132

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G017550	Cucurbita pepo (Zucchini)	cgybcpeB029
CsGy1G017550	Cucurbita pepo (Zucchini)	cgybcpeB109
CsGy1G017550	Cucurbita pepo (Zucchini)	cgybcpeB148
CsGy1G017550	Cucumber (Chinese Long) v2	cgybcuB020
CsGy1G017550	Cucumber (Chinese Long) v2	cgybcuB030
CsGy1G017550	Bottle gourd (USVL1VR-Ls)	cgyblsiB011
CsGy1G017550	Bottle gourd (USVL1VR-Ls)	cgyblsiB051
CsGy1G017550	Bottle gourd (USVL1VR-Ls)	cgyblsiB070
CsGy1G017550	Melon (DHL92) v3.5.1	cgybmeB072
CsGy1G017550	Melon (DHL92) v3.6.1	cgybmedB061
CsGy1G017550	Melon (DHL92) v3.6.1	cgybmedB068
CsGy1G017550	Watermelon (Charleston Gray)	cgybwcgB061
CsGy1G017550	Watermelon (97103) v1	cgybwmB039
CsGy1G017550	Wild cucumber (PI 183967)	cgybcpiB018
CsGy1G017550	Wild cucumber (PI 183967)	cgybcpiB027
CsGy1G017550	Silver-seed gourd	carcgybB0268
CsGy1G017550	Silver-seed gourd	carcgybB0508
CsGy1G017550	Cucumber (Chinese Long) v3	cgybcucB021
CsGy1G017550	Cucumber (Chinese Long) v3	cgybcucB035
CsGy1G017550	Watermelon (97103) v2	cgybwmbB060
CsGy1G017550	Cucumber (Gy14) v2	cgybcgybB013
CsGy1G017550	Cucumber (Gy14) v2	cgybcgybB026
CsGy1G017550	Cucurbita maxima (Rimu)	cgybcmaB039
CsGy1G017550	Cucurbita moschata (Rifu)	cgybcmoB037