CsGy1G017090 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G017090
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Delta 9 desaturase
Location	Chr1 : 14845094 .. 14847557 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTTTGGAATCACTATTTCGTATCATAGAAATCTTTCGCATAGAAGTTTCAGACTTCCCAAATGGCTCGAATACTTTTTTGCATATTGCGGAGCTCTTGCTTTTCAGGTTTGGCATTTTTAAAACTTTCTTCTTTTTTTATTTTAAACTTAAAAAATTTTACTAGAAAGAGGTTCTTATCATTTGACATTAAGAAAAATGTTGAGACACATTTCTATCGTCCCTACTTTGGTAAGTAGTTTTGATCTTATTTGTTTTTCTATTTTAATTTTAGGGTGATCCAATCGATTGGGTGAGTACACATAGATGTCATCATCAATTTGCCGATACGGAAAATGACCCGCATAGTCCTATTCAAGGATTTTGGTTTAGTTATTTCATTTGGATTTTGGATTCCAATGCTTTGACCAGAAGAGTTTGTCCACAGTATTTCATTGATCATAAAGATACAGAAAAAACCATCTTCACAGTGGTTTTAAAGTATGGAAGACCAAATAATGTTGGTGACTTGGAGAAACAATTCTTCTATAGGTTTCTTCGCAAAACTTATTTTCTTCATCAACTTGCTCTTGCAATCCTTCTTTATGCAGTCGGAGGAACACCTTTTCTTATATGGGGAGCGGTAAAATAAAATTACTTTATTATTATTATTTTTTAAAAAATTAACCAAAATATTTACAAATATAAATAAATATCATTCTTTATCGATGATAAATAATGATATATACAGATAGACTACAATCATCTATCATTGATAATAGACACTGATAGACATCTATCAATATATATCATTTATACTATATTTATATATATTAATTACAATACAGTTTTGTCGTTTAAAATACATTTATAAATTTTATATATTTGAATACATTTTTACGTTGACTTATAAATGAAGTGGACATGATACTTTATATTATTATTAATAAATCTCTTTGTTTTGCAGTTTGTGAGGACCATAGGAACCATACATGTGACGTTTATGGTGAATTCAATATGTCATACATTTGGAAATCAACCATGGAACACTGGAGATTTGTCGAGAAATACTTGGTATAAGTGCTTTTGTATATATTTTCTTTTTCATTTAATATCGGTTGTCAAATAGTTGTGTCGACCTTTATTTTAGTTAGCTTGGTAATATTCTTTAAATATGGTAAATTTACATGTCAACCAAAATTAAGAAAAGCATTTTATCAAAAGTAGTTTCTTAAAAGAAGTATAAATATAATCAATTTAGAAAAATGAACGCCAACAAAAACGCTATTAGTTAACGTGTGTATATAATTAGTTCAATACAATATGGTGCCTAAAAAAGTCATTAGTCAACAAACACAAAAAAATGCCCGTCTATGATCTATAATATCAATGATTTAATCTTTTTAAAAAAATTATCAATCAAATTAGCATATATTAGAATTGTAAATTGGTATCCTAACTCTTTTAGAATTTGGAAATGTTTCATATATGTCTAATTGTAGTTTAAAAAGAAACTGAAACTAGCATATATTAACTAGTTTATGTCATGAACGATTCATAATTAATGATCAAAGTTAGTAACCCATAAAAGTTTACCGTTCGAAGAAAACTACCTCAAAAGTTTAAGAGTTGGGAGGAGAGCATACAAATATGAGAGTTCCGTAACTAAACTTGCAAAAGTAGTTAGAGTGCTGGTTAAAGCTATTCCCTCGTATGTGGGTTGTTGTTCGTCTAGTCTGGTACGGTTCAAGTAGGTTTAGGCAATTATATGGGTGCAAAAATGAGAGAAACTTTTGTTTATTTTTATCATTTCTCTTCTTAAATTGGATCTGAAATTTCAATTATGTAATAAACTAAACCTAAACATTTTATTATTCTTCAATAACCATATTCTATAGAAACTCTATTGTTTACCTTTTATTGATTCTTCCATCTTCCGTTTTCTTTTTCTTTCATTTTTTTTCAATGATGGTGAGCTTCCTCTTGATTCCAACTCCCTCTCCCTCTTTGACGAATGCACGTTCAAGATGGATATTGTGTTGACTTTGGAGAATAATTGACATAAACTATTTCTACCAAATTTGCTTTCAAGAAAATAATTTTCACGACACAAAACATTACACTCATATTAGACTAGACAACAAATTAGCAAATATATATATATAGTGAAATGAAATGAACGATTATTGAATGTTGTATTTGTAAAGTAAACAAAGCTAATTCCACATTATAGCTAATGCCTTTGTATGTTGCAAATTAATTAATAAAATATTTATGGTTTTGTTTTTTAGGTGGATGTGTTTGATTTCATTCGGAGAAGGTTGGCATAATAACCATCATGCTTTTGAGTATTCAGCCAGACAAGGGCTTGAATGGTGGCAGATCGATATTTCTTGGTACATTATTTGGTTTCTTCAGGTCATTGGATTAGCAACTGAGGTTAAAGTACCCTCTCAATCTCACAAGCAAAGACTACAAGCTTTGG

mRNA sequence

TGTTTTGGAATCACTATTTCGTATCATAGAAATCTTTCGCATAGAAGTTTCAGACTTCCCAAATGGCTCGAATACTTTTTTGCATATTGCGGAGCTCTTGCTTTTCAGGGTGATCCAATCGATTGGGTGAGTACACATAGATGTCATCATCAATTTGCCGATACGGAAAATGACCCGCATAGTCCTATTCAAGGATTTTGGTTTAGTTATTTCATTTGGATTTTGGATTCCAATGCTTTGACCAGAAGAGTTTGTCCACAGTATTTCATTGATCATAAAGATACAGAAAAAACCATCTTCACAGTGGTTTTAAAGTATGGAAGACCAAATAATGTTGTTTGTGAGGACCATAGGAACCATACATGTGACGTTTATGGTGAATTCAATATGTCATACATTTGGAAATCAACCATGGAACACTGGAGATTTGTCGAGAAATACTTGGTGGATGTGTTTGATTTCATTCGGAGAAGGTTGGCATAATAACCATCATGCTTTTGAGTATTCAGCCAGACAAGGGCTTGAATGGTGGCAGATCGATATTTCTTGGTACATTATTTGGTTTCTTCAGGTCATTGGATTAGCAACTGAGGTTAAAGTACCCTCTCAATCTCACAAGCAAAGACTACAAGCTTTGG

Coding sequence (CDS)

TGTTTTGGAATCACTATTTCGTATCATAGAAATCTTTCGCATAGAAGTTTCAGACTTCCCAAATGGCTCGAATACTTTTTTGCATATTGCGGAGCTCTTGCTTTTCAGGGTGATCCAATCGATTGGGTGAGTACACATAGATGTCATCATCAATTTGCCGATACGGAAAATGACCCGCATAGTCCTATTCAAGGATTTTGGTTTAGTTATTTCATTTGGATTTTGGATTCCAATGCTTTGACCAGAAGAGTTTGTCCACAGTATTTCATTGATCATAAAGATACAGAAAAAACCATCTTCACAGTGGTTTTAAAGTATGGAAGACCAAATAATGTTGTTTGTGAGGACCATAGGAACCATACATGTGACGTTTATGGTGAATTCAATATGTCATACATTTGGAAATCAACCATGGAACACTGGAGATTTGTCGAGAAATACTTGGTGGATGTGTTTGATTTCATTCGGAGAAGGTTGGCATAA

Protein sequence

CFGITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADTENDPHSPIQGFWFSYFIWILDSNALTRRVCPQYFIDHKDTEKTIFTVVLKYGRPNNVVCEDHRNHTCDVYGEFNMSYIWKSTMEHWRFVEKYLVDVFDFIRRRLA

Homology

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BLAST of CsGy1G017090 vs. NCBI nr
Match: KGN65118.1 (hypothetical protein Csa_1G227450 [Cucumis sativus])

HSP 1 Score: 253.8 bits (647), Expect = 3.8e-64
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   CFGITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADTENDPH 60
           CFGITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQF DTENDPH
Sbjct: 60  CFGITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFVDTENDPH 119

Query: 61  SPIQGFWFSYFIWILDSNALTRRVCPQYFIDHKDTEKTIFTVVLKYGRPNNV 113
           SPIQGFWFSYFIWILDSNALTRRVCPQYFIDHKDTEKTIFTVVLKYGRPNNV
Sbjct: 120 SPIQGFWFSYFIWILDSNALTRRVCPQYFIDHKDTEKTIFTVVLKYGRPNNV 171

[Close]

BLAST of CsGy1G017090 vs. NCBI nr
Match: XP_008443946.1 (PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucumis melo])

HSP 1 Score: 242.7 bits (618), Expect = 8.8e-61
Identity = 105/112 (93.75%), Postives = 109/112 (97.32%), Query Frame = 0


Query: 1   CFGITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADTENDPH 60
           CFGITISYHRNLSHRSF+LPKWLEYFFAYCG+LAFQGDPIDWVSTHR HHQFADTENDPH
Sbjct: 59  CFGITISYHRNLSHRSFKLPKWLEYFFAYCGSLAFQGDPIDWVSTHRYHHQFADTENDPH 118

Query: 61  SPIQGFWFSYFIWILDSNALTRRVCPQYFIDHKDTEKTIFTVVLKYGRPNNV 113
           SPIQGFWFSY  W+LDSNALTRRVCPQYFIDHKDTEKTIFT+VLKYGRPNNV
Sbjct: 119 SPIQGFWFSYLTWLLDSNALTRRVCPQYFIDHKDTEKTIFTLVLKYGRPNNV 170

[Close]

BLAST of CsGy1G017090 vs. NCBI nr
Match: KGN65119.1 (hypothetical protein Csa_1G227460 [Cucumis sativus])

HSP 1 Score: 239.2 bits (609), Expect = 9.7e-60
Identity = 103/111 (92.79%), Postives = 108/111 (97.30%), Query Frame = 0


Query: 2   FGITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADTENDPHS 61
           FGI ISYHRNLSHRSFRL KWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADT+NDPHS
Sbjct: 59  FGINISYHRNLSHRSFRLSKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADTKNDPHS 118

Query: 62  PIQGFWFSYFIWILDSNALTRRVCPQYFIDHKDTEKTIFTVVLKYGRPNNV 113
           PIQGFWFSYF W+LDSNALT+RVCPQYFIDHKDT+KTIFT+VLKYGRPNNV
Sbjct: 119 PIQGFWFSYFTWLLDSNALTKRVCPQYFIDHKDTDKTIFTLVLKYGRPNNV 169

[Close]

BLAST of CsGy1G017090 vs. NCBI nr
Match: XP_008443947.1 (PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 237.7 bits (605), Expect = 2.8e-59
Identity = 102/110 (92.73%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 3   GITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADTENDPHSP 62
           GI ISYHRNLSHRSF+LPKWLEYF AYCG LAFQGDPIDWVSTHRCHHQF DTENDPHSP
Sbjct: 61  GINISYHRNLSHRSFKLPKWLEYFLAYCGTLAFQGDPIDWVSTHRCHHQFVDTENDPHSP 120

Query: 63  IQGFWFSYFIWILDSNALTRRVCPQYFIDHKDTEKTIFTVVLKYGRPNNV 113
           IQGFWFSYF W+LDSNALTRRVCPQYFIDHKDTEKTIFT+VLKYGRPNNV
Sbjct: 121 IQGFWFSYFTWLLDSNALTRRVCPQYFIDHKDTEKTIFTLVLKYGRPNNV 170

[Close]

BLAST of CsGy1G017090 vs. NCBI nr
Match: XP_023526900.1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.8 bits (543), Expect = 4.4e-52
Identity = 92/111 (82.88%), Postives = 97/111 (87.39%), Query Frame = 0


Query: 2   FGITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADTENDPHS 61
           FGITISYHRNLSHRSF LPKWLEY FAYCG  AFQGDPIDWVSTHRCHHQ ADTE DPHS
Sbjct: 66  FGITISYHRNLSHRSFNLPKWLEYLFAYCGTHAFQGDPIDWVSTHRCHHQNADTERDPHS 125

Query: 62  PIQGFWFSYFIWILDSNALTRRVCPQYFIDHKDTEKTIFTVVLKYGRPNNV 113
           P QGFWFSY IW LDS  LT +VCP+YFID KDT+K +FT+VLKYGRPNNV
Sbjct: 126 PTQGFWFSYLIWFLDSITLTNKVCPEYFIDRKDTKKGVFTLVLKYGRPNNV 176

[Close]

BLAST of CsGy1G017090 vs. TAIR10
Match: AT1G06080.1 (delta 9 desaturase 1)

HSP 1 Score: 147.9 bits (372), Expect = 5.3e-36
Identity = 61/112 (54.46%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 3   GITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADTENDPHSP 62
           GIT+SYHRNL+HRSF++PKWLEYFFAYCG LA QGDPIDWVSTHR HHQF D++ DPHSP
Sbjct: 77  GITVSYHRNLAHRSFKVPKWLEYFFAYCGLLAIQGDPIDWVSTHRYHHQFTDSDRDPHSP 136

Query: 63  IQGFWFSYFIWILDSNALTRRVCPQYFID-------HKDTEKTIFTVVLKYG 108
            +GFWFS+ +W+ D+  L  +   +  ++       +K  ++T+   +L +G
Sbjct: 137 NEGFWFSHLLWLFDTGYLVEKCGRRTNVEDLKRQWYYKFLQRTVLYHILTFG 188

[Close]

BLAST of CsGy1G017090 vs. TAIR10
Match: AT3G15850.1 (fatty acid desaturase 5)

HSP 1 Score: 144.4 bits (363), Expect = 5.9e-35
Identity = 56/81 (69.14%), Postives = 70/81 (86.42%), Query Frame = 0


Query: 3   GITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADTENDPHSP 62
           GIT+S+HRNLSH++F+LPKWLEY FAYCGA A QG+PIDWVSTHR HHQF D++ DPHSP
Sbjct: 142 GITLSFHRNLSHKAFKLPKWLEYLFAYCGAQALQGNPIDWVSTHRYHHQFCDSDRDPHSP 201

Query: 63  IQGFWFSYFIWILDSNALTRR 84
           + GFWFS+  W+ D+N +T+R
Sbjct: 202 LDGFWFSHMNWMFDTNTITQR 222

[Close]

BLAST of CsGy1G017090 vs. TAIR10
Match: AT2G31360.1 (16:0delta9 desaturase 2)

HSP 1 Score: 141.0 bits (354), Expect = 6.5e-34
Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 0


Query: 3   GITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADTENDPHSP 62
           GIT+SYHRNL+HRSF++PKWLEY  AYC  LA QGDPIDWVSTHR HHQF D+E DPHSP
Sbjct: 79  GITVSYHRNLAHRSFKVPKWLEYLLAYCALLAIQGDPIDWVSTHRYHHQFTDSERDPHSP 138

Query: 63  IQGFWFSYFIWILDSNALTRR 84
            +GFWFS+ +WI DS  L  +
Sbjct: 139 KEGFWFSHLLWIYDSAYLVSK 159

[Close]

BLAST of CsGy1G017090 vs. TAIR10
Match: AT3G15870.1 (Fatty acid desaturase family protein)

HSP 1 Score: 133.3 bits (334), Expect = 1.4e-31
Identity = 54/77 (70.13%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 4   ITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADTENDPHSPI 63
           IT+SYHRNLSHRSF LPKWLEY FAY G LAFQGDPI+WVS HR HH+  +T+ DPHSP 
Sbjct: 135 ITLSYHRNLSHRSFDLPKWLEYLFAYGGVLAFQGDPIEWVSNHRYHHKHCETQRDPHSPT 194

Query: 64  QGFWFSYFIWILDSNAL 81
           QGFWFS+  WI D++++
Sbjct: 195 QGFWFSHMAWIFDTSSI 211

[Close]

BLAST of CsGy1G017090 vs. TAIR10
Match: AT1G06100.1 (Fatty acid desaturase family protein)

HSP 1 Score: 132.9 bits (333), Expect = 1.8e-31
Identity = 53/80 (66.25%), Postives = 65/80 (81.25%), Query Frame = 0


Query: 4   ITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADTENDPHSPI 63
           IT SYHRNL+HRSF+LPKWLEY FAY   LA QGDP+DWVS HR HHQF D++ DPHSPI
Sbjct: 72  ITFSYHRNLTHRSFKLPKWLEYPFAYSALLALQGDPLDWVSIHRFHHQFTDSDRDPHSPI 131

Query: 64  QGFWFSYFIWILDSNALTRR 84
           +GFWFS+ +WI D++ +  +
Sbjct: 132 EGFWFSHVLWIFDTDYIREK 151

[Close]

BLAST of CsGy1G017090 vs. Swiss-Prot
Match: sp|O65797|ADS1_ARATH (Delta-9 acyl-lipid desaturase 1 OS=Arabidopsis thaliana OX=3702 GN=ADS1 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 9.6e-35
Identity = 61/112 (54.46%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 3   GITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADTENDPHSP 62
           GIT+SYHRNL+HRSF++PKWLEYFFAYCG LA QGDPIDWVSTHR HHQF D++ DPHSP
Sbjct: 77  GITVSYHRNLAHRSFKVPKWLEYFFAYCGLLAIQGDPIDWVSTHRYHHQFTDSDRDPHSP 136

Query: 63  IQGFWFSYFIWILDSNALTRRVCPQYFID-------HKDTEKTIFTVVLKYG 108
            +GFWFS+ +W+ D+  L  +   +  ++       +K  ++T+   +L +G
Sbjct: 137 NEGFWFSHLLWLFDTGYLVEKCGRRTNVEDLKRQWYYKFLQRTVLYHILTFG 188

[Close]

BLAST of CsGy1G017090 vs. Swiss-Prot
Match: sp|Q949X0|ADS3_ARATH (Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ADS3 PE=1 SV=2)

HSP 1 Score: 144.4 bits (363), Expect = 1.1e-33
Identity = 56/81 (69.14%), Postives = 70/81 (86.42%), Query Frame = 0


Query: 3   GITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADTENDPHSP 62
           GIT+S+HRNLSH++F+LPKWLEY FAYCGA A QG+PIDWVSTHR HHQF D++ DPHSP
Sbjct: 142 GITLSFHRNLSHKAFKLPKWLEYLFAYCGAQALQGNPIDWVSTHRYHHQFCDSDRDPHSP 201

Query: 63  IQGFWFSYFIWILDSNALTRR 84
           + GFWFS+  W+ D+N +T+R
Sbjct: 202 LDGFWFSHMNWMFDTNTITQR 222

[Close]

BLAST of CsGy1G017090 vs. Swiss-Prot
Match: sp|Q9SID2|ADS2_ARATH (Delta-9 acyl-lipid desaturase 2 OS=Arabidopsis thaliana OX=3702 GN=ADS2 PE=2 SV=2)

HSP 1 Score: 141.0 bits (354), Expect = 1.2e-32
Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 0


Query: 3   GITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADTENDPHSP 62
           GIT+SYHRNL+HRSF++PKWLEY  AYC  LA QGDPIDWVSTHR HHQF D+E DPHSP
Sbjct: 79  GITVSYHRNLAHRSFKVPKWLEYLLAYCALLAIQGDPIDWVSTHRYHHQFTDSERDPHSP 138

Query: 63  IQGFWFSYFIWILDSNALTRR 84
            +GFWFS+ +WI DS  L  +
Sbjct: 139 KEGFWFSHLLWIYDSAYLVSK 159

[Close]

BLAST of CsGy1G017090 vs. Swiss-Prot
Match: sp|Q9LVZ3|ADS32_ARATH (Probable lipid desaturase ADS3.2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ADS3.2 PE=2 SV=3)

HSP 1 Score: 133.3 bits (334), Expect = 2.4e-30
Identity = 54/77 (70.13%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 4   ITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADTENDPHSPI 63
           IT+SYHRNLSHRSF LPKWLEY FAY G LAFQGDPI+WVS HR HH+  +T+ DPHSP 
Sbjct: 135 ITLSYHRNLSHRSFDLPKWLEYLFAYGGVLAFQGDPIEWVSNHRYHHKHCETQRDPHSPT 194

Query: 64  QGFWFSYFIWILDSNAL 81
           QGFWFS+  WI D++++
Sbjct: 195 QGFWFSHMAWIFDTSSI 211

[Close]

BLAST of CsGy1G017090 vs. Swiss-Prot
Match: sp|Q9LND8|ADSL2_ARATH (Delta-9 desaturase-like 2 protein OS=Arabidopsis thaliana OX=3702 GN=At1g06100 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.2e-30
Identity = 53/80 (66.25%), Postives = 65/80 (81.25%), Query Frame = 0


Query: 4   ITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADTENDPHSPI 63
           IT SYHRNL+HRSF+LPKWLEY FAY   LA QGDP+DWVS HR HHQF D++ DPHSPI
Sbjct: 72  ITFSYHRNLTHRSFKLPKWLEYPFAYSALLALQGDPLDWVSIHRFHHQFTDSDRDPHSPI 131

Query: 64  QGFWFSYFIWILDSNALTRR 84
           +GFWFS+ +WI D++ +  +
Sbjct: 132 EGFWFSHVLWIFDTDYIREK 151

[Close]

BLAST of CsGy1G017090 vs. TrEMBL
Match: tr|A0A0A0LTL5|A0A0A0LTL5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G227450 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.5e-64
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   CFGITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADTENDPH 60
           CFGITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQF DTENDPH
Sbjct: 60  CFGITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFVDTENDPH 119

Query: 61  SPIQGFWFSYFIWILDSNALTRRVCPQYFIDHKDTEKTIFTVVLKYGRPNNV 113
           SPIQGFWFSYFIWILDSNALTRRVCPQYFIDHKDTEKTIFTVVLKYGRPNNV
Sbjct: 120 SPIQGFWFSYFIWILDSNALTRRVCPQYFIDHKDTEKTIFTVVLKYGRPNNV 171

[Close]

BLAST of CsGy1G017090 vs. TrEMBL
Match: tr|A0A1S3B9A6|A0A1S3B9A6_CUCME (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487416 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 5.8e-61
Identity = 105/112 (93.75%), Postives = 109/112 (97.32%), Query Frame = 0


Query: 1   CFGITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADTENDPH 60
           CFGITISYHRNLSHRSF+LPKWLEYFFAYCG+LAFQGDPIDWVSTHR HHQFADTENDPH
Sbjct: 59  CFGITISYHRNLSHRSFKLPKWLEYFFAYCGSLAFQGDPIDWVSTHRYHHQFADTENDPH 118

Query: 61  SPIQGFWFSYFIWILDSNALTRRVCPQYFIDHKDTEKTIFTVVLKYGRPNNV 113
           SPIQGFWFSY  W+LDSNALTRRVCPQYFIDHKDTEKTIFT+VLKYGRPNNV
Sbjct: 119 SPIQGFWFSYLTWLLDSNALTRRVCPQYFIDHKDTEKTIFTLVLKYGRPNNV 170

[Close]

BLAST of CsGy1G017090 vs. TrEMBL
Match: tr|A0A0A0LVX7|A0A0A0LVX7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G227460 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 6.4e-60
Identity = 103/111 (92.79%), Postives = 108/111 (97.30%), Query Frame = 0


Query: 2   FGITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADTENDPHS 61
           FGI ISYHRNLSHRSFRL KWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADT+NDPHS
Sbjct: 59  FGINISYHRNLSHRSFRLSKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADTKNDPHS 118

Query: 62  PIQGFWFSYFIWILDSNALTRRVCPQYFIDHKDTEKTIFTVVLKYGRPNNV 113
           PIQGFWFSYF W+LDSNALT+RVCPQYFIDHKDT+KTIFT+VLKYGRPNNV
Sbjct: 119 PIQGFWFSYFTWLLDSNALTKRVCPQYFIDHKDTDKTIFTLVLKYGRPNNV 169

[Close]

BLAST of CsGy1G017090 vs. TrEMBL
Match: tr|A0A1S3B9Z7|A0A1S3B9Z7_CUCME (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487417 PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.9e-59
Identity = 102/110 (92.73%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 3   GITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADTENDPHSP 62
           GI ISYHRNLSHRSF+LPKWLEYF AYCG LAFQGDPIDWVSTHRCHHQF DTENDPHSP
Sbjct: 61  GINISYHRNLSHRSFKLPKWLEYFLAYCGTLAFQGDPIDWVSTHRCHHQFVDTENDPHSP 120

Query: 63  IQGFWFSYFIWILDSNALTRRVCPQYFIDHKDTEKTIFTVVLKYGRPNNV 113
           IQGFWFSYF W+LDSNALTRRVCPQYFIDHKDTEKTIFT+VLKYGRPNNV
Sbjct: 121 IQGFWFSYFTWLLDSNALTRRVCPQYFIDHKDTEKTIFTLVLKYGRPNNV 170

[Close]

BLAST of CsGy1G017090 vs. TrEMBL
Match: tr|A0A1S3BXK9|A0A1S3BXK9_CUCME (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC107990276 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.8e-47
Identity = 81/111 (72.97%), Postives = 95/111 (85.59%), Query Frame = 0


Query: 2   FGITISYHRNLSHRSFRLPKWLEYFFAYCGALAFQGDPIDWVSTHRCHHQFADTENDPHS 61
           FGI+ISYHRNLSH+SF+LPKWLEY FAYCG  AFQGDPIDWV+THR HHQ+ DTE DPHS
Sbjct: 66  FGISISYHRNLSHKSFKLPKWLEYVFAYCGVHAFQGDPIDWVNTHRYHHQYTDTERDPHS 125

Query: 62  PIQGFWFSYFIWILDSNALTRRVCPQYFIDHKDTEKTIFTVVLKYGRPNNV 113
           P+QGFWFSY IW  D+  LT++VCP+YFID+KD E+  F++V KYG PNNV
Sbjct: 126 PVQGFWFSYVIWTFDTITLTKKVCPEYFIDYKDKERGAFSLVTKYGTPNNV 176

The following BLAST results are available for this feature:

BLAST of CsGy1G017090 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65118.1	3.8e-64	99.11	hypothetical protein Csa_1G227450 [Cucumis sativus]	[more]
XP_008443946.1	8.8e-61	93.75	PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplas...	[more]
KGN65119.1	9.7e-60	92.79	hypothetical protein Csa_1G227460 [Cucumis sativus]	[more]
XP_008443947.1	2.8e-59	92.73	PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplas...	[more]
XP_023526900.1	4.4e-52	82.88	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [C...	[more]

BLAST of CsGy1G017090 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G06080.1	5.3e-36	54.46	delta 9 desaturase 1	[more]
AT3G15850.1	5.9e-35	69.14	fatty acid desaturase 5	[more]
AT2G31360.1	6.5e-34	70.37	16:0delta9 desaturase 2	[more]
AT3G15870.1	1.4e-31	70.13	Fatty acid desaturase family protein	[more]
AT1G06100.1	1.8e-31	66.25	Fatty acid desaturase family protein	[more]

BLAST of CsGy1G017090 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O65797\|ADS1_ARATH	9.6e-35	54.46	Delta-9 acyl-lipid desaturase 1 OS=Arabidopsis thaliana OX=3702 GN=ADS1 PE=2 SV=...	[more]
sp\|Q949X0\|ADS3_ARATH	1.1e-33	69.14	Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic OS=Arab...	[more]
sp\|Q9SID2\|ADS2_ARATH	1.2e-32	70.37	Delta-9 acyl-lipid desaturase 2 OS=Arabidopsis thaliana OX=3702 GN=ADS2 PE=2 SV=...	[more]
sp\|Q9LVZ3\|ADS32_ARATH	2.4e-30	70.13	Probable lipid desaturase ADS3.2, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9LND8\|ADSL2_ARATH	3.2e-30	66.25	Delta-9 desaturase-like 2 protein OS=Arabidopsis thaliana OX=3702 GN=At1g06100 P...	[more]

BLAST of CsGy1G017090 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LTL5\|A0A0A0LTL5_CUCSA	2.5e-64	99.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G227450 PE=3 SV=1	[more]
tr\|A0A1S3B9A6\|A0A1S3B9A6_CUCME	5.8e-61	93.75	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS...	[more]
tr\|A0A0A0LVX7\|A0A0A0LVX7_CUCSA	6.4e-60	92.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G227460 PE=3 SV=1	[more]
tr\|A0A1S3B9Z7\|A0A1S3B9Z7_CUCME	1.9e-59	92.73	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like is...	[more]
tr\|A0A1S3BXK9\|A0A1S3BXK9_CUCME	2.8e-47	72.97	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006629	lipid metabolic process
GO:0055114	oxidation-reduction process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water

Vocabulary: **INTERPRO**
Term	Definition
IPR005804	FA_desaturase_dom
IPR015876	Acyl-CoA_DS

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006629	lipid metabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G017090.1	CsGy1G017090.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015876	Acyl-CoA desaturase	PRINTS	PR00075	FACDDSATRASE	coord: 46..75 score: 48.6 coord: 9..29 score: 35.84
IPR015876	Acyl-CoA desaturase	PANTHER	PTHR11351	ACYL-COA DESATURASE	coord: 2..87
IPR015876	Acyl-CoA desaturase	CDD	cd03505	Delta9-FADS-like	coord: 1..75 e-value: 1.69828E-33 score: 116.886
IPR005804	Fatty acid desaturase domain	PFAM	PF00487	FA_desaturase	coord: 3..81 e-value: 7.7E-7 score: 29.1
None	No IPR available	PANTHER	PTHR11351:SF2	DELTA-9 ACYL-LIPID DESATURASE 1-RELATED	coord: 2..87

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G017090	Melon (DHL92) v3.5.1	cgybmeB049
CsGy1G017090	Melon (DHL92) v3.6.1	cgybmedB045
CsGy1G017090	Watermelon (Charleston Gray)	cgybwcgB061
CsGy1G017090	Watermelon (Charleston Gray)	cgybwcgB063
CsGy1G017090	Watermelon (97103) v1	cgybwmB039
CsGy1G017090	Watermelon (97103) v1	cgybwmB079
CsGy1G017090	Wild cucumber (PI 183967)	cgybcpiB008
CsGy1G017090	Silver-seed gourd	carcgybB0040
CsGy1G017090	Silver-seed gourd	carcgybB0132
CsGy1G017090	Silver-seed gourd	carcgybB0628
CsGy1G017090	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G017090	Watermelon (97103) v2	cgybwmbB060
CsGy1G017090	Watermelon (97103) v2	cgybwmbB063
CsGy1G017090	Wax gourd	cgybwgoB093
CsGy1G017090	Cucurbita maxima (Rimu)	cgybcmaB014
CsGy1G017090	Cucurbita maxima (Rimu)	cgybcmaB039
CsGy1G017090	Cucurbita moschata (Rifu)	cgybcmoB014
CsGy1G017090	Cucurbita moschata (Rifu)	cgybcmoB037
CsGy1G017090	Cucurbita pepo (Zucchini)	cgybcpeB040
CsGy1G017090	Cucurbita pepo (Zucchini)	cgybcpeB109
CsGy1G017090	Cucumber (Chinese Long) v2	cgybcuB009
CsGy1G017090	Bottle gourd (USVL1VR-Ls)	cgyblsiB051
CsGy1G017090	Bottle gourd (USVL1VR-Ls)	cgyblsiB063