CsGy1G015780 (gene) Cucumber (Gy14) v2

NameCsGy1G015780
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionMitochondrial pyruvate carrier
LocationChr1 : 11786749 .. 11789085 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAACAAACTTCTGCTTGGCGCATGTTCTTCAACAAAATGTCCTTTGATGTTTGAAAATGAGTGTAGGGCTATGAAACGTAGGCATGTAAGCAATGGAGTAATCGTCCTGGAAAAGAGGTCAATGTTGACTTTGTTGCCCGAAGTCTAAATTGGAAGGGATGAACCTAAATGAGTTTTCCTTCATTCTGATGATAACTTCAACCATATCAAGGAGAGATGATGGTTTTTTTTTGTTGCAATTTCACAAATCCCTCCACAAGCGCCTCCAATGAACTAAATTATATCAAGACTCCATTTTGTCCTGAAGAAGGGGTCTGATGTTCCTTTGGGTGGTCAGGGTGATTACTTGATGCATTCTGTAGGATTCTTTGTTGGAAGTTAAGTGGGAAGGGACATTAATGGAGGTTGGTGTAGGTGTAGTGGTTGGTGGGAAGTCTTTAAAAATATTCCAGCCTTTCTGTTTTCACCGCTGGGACAAATCAACTTTGCGCATCAACCATTTTCTTCCAGCTTAGTAGTCTCTGCACAGTGCCCCATTCTGCTCGATAACTTCTCAACCGACATGCCATCCTTTTTTCTTTAAAGAGTTTTTGAATGAAAGGGACTCCATGAGGCTAATGAGGGTAGATAAAAGCTAGGCTGGAAACTCCACTGAATAGAGGAGAAAGTAGTGTCTTCGGTGTTCAGTAACTAACTCTGCTTCCTTTTCAAGCTTGGTCAGTTTCAATGGAAATTTCTTCCTTCTTGGAAGGAAGACTTTGGTGGGGCGTCACTGGCCATTGAAGAGCGACCATAAGAGGTTATTTCCTGGTCGGGGGGTTGGCCAGAGGGGATTCTTGGTTAGGTAGGATCATGGATGTAGAGAGAGGTCTTCAATATTATGTGCTGACTTTGACAGTGGTGTGAAAAACATACATAAACAATAAATAATAAGATTAAAAGTCAATTGACGCTGAGTTCTTATTTTATCCCTTTAAGTACCTTCATCAATCAATAGGATTAAACCTTATCTTAGCTAATGGCTACACTTTCTAGCTCTGAATATCTTTTTTGTTTCTGGAAAATGCAGAAGAACTGGAACCTTTTTAGTGTCAACATTGCAATGGCAGGGACTGGCATCTACCAATTGACAAGAAAAATACAGTAAGTCATCTCTCACTTCTTCAGGCTCATGAAGAAAAACATTTCTCAGCATTGATTCTAGTGGGTCAAGGGGATTTTGTTGTGATCTAAAATTAGTAATAAGTACAAGCTTTATGTTTACGTTATCGACATTTTTAACTTAGAGCCTAATTTTCATGTGAATATGCTATTTGCATTTTTTCAACTTTATTTTATCTTTTTTGCATCAATCATGTGCATCTTTGCCACTAGTTTTAGAATGTACTTTTGAATATTAAGTCCGCAAAACTTTTTAAATCTAAGATGTAAAAGGAAGAACCTTCCATACGGACTAGTTGGTCTCCATGTGATTTTGTTTCATGGCAACTAATCACTTTCATCTTCATTGAGGCAAATTTTATACTTGATAGAAATTAGACTTCAATTGTATTTATGTTTTCTTGAATGTGAACCTTAATATATTCACACAAAATAATGGTGTAAAAAAATGAACGTACGAGACTCCCCATTTAGGAATATATTAGGATTATCAGTATGTTTATAAGTGGGGGCATATTAACAAATAACTAAGGAGTTCGTTAGGGTTATAAATAGAGACAGTGGGATTGGAGCAAAATTGGAAGGGTTTCAGAAGTTGACTTTGGAAGAGAAATCTCACGAGAGGCTCCTATTATATTATAGTTTCCCTTGTATTTCAATAATTTTTTTCGAGTGTTCATGTGTTTCTTTGTATTCTTAGAGTTGTATCCTAACCCATTCGATGATTATAACAAAATGTTAACAAGCTTTAACGTAACTAAAAGAAATATTTGTTAGAAAAGTGAGTTTAGAAAGATATAACCACTGTATTTTACCTTGAACTTTGCTGAGTTCTTAGTTGGATATTTTGGTAGGATTGTTTGTGATTGATCGATCTTCTCTTTACTAATTTTACATTTCATTTGCAAAATGGTTGTAACAGGCATGATTATTTCTCCAAGGAGGAAGTAGCTGTTGCCAAAGAATGACGACGAAATATGATCTATTCTTCATTTATCTCTGTGACGATCAAAATTTCCCTTACTTTTTCATGCATCTCCTCCTCCAATTCTGACCTACCAAAGTCTCTATGACTTCTCCTTTATTTTCAATCAATTTATCTTTCTTTATTTTACTTTTGTAGCTATGCCACTATGCTTGAAACTGTTCGGAAAAATAAATAAGATCCTAT

mRNA sequence

ATGGAGAACAAACTTCTGCTTGGCGCATGTTCTTCAACAAAATGTCCTTTGATGTTTGAAAATGAGTGTAGGGCTATGAAACGTAGGCATGTAAGCAATGGAGTAATCGTCCTGGAAAAGAGTTTCAATGGAAATTTCTTCCTTCTTGGAAGGAAGACTTTGGTGGGGCGTCACTGGCCATTGAAGAGCGACCATAAGAGGTTATTTCCTGGTCGGGGGGTTGGCCAGAGGGGATTCTTGAAGAACTGGAACCTTTTTAGTGTCAACATTGCAATGGCAGGGACTGGCATCTACCAATTGACAAGAAAAATACAGCATGATTATTTCTCCAAGGAGGAAGTAGCTGTTGCCAAAGAATGACGACGAAATATGATCTATTCTTCATTTATCTCTGTGACGATCAAAATTTCCCTTACTTTTTCATGCATCTCCTCCTCCAATTCTGACCTACCAAAGTCTCTATGACTTCTCCTTTATTTTCAATCAATTTATCTTTCTTTATTTTACTTTTGTAGCTATGCCACTATGCTTGAAACTGTTCGGAAAAATAAATAAGATCCTAT

Coding sequence (CDS)

ATGGAGAACAAACTTCTGCTTGGCGCATGTTCTTCAACAAAATGTCCTTTGATGTTTGAAAATGAGTGTAGGGCTATGAAACGTAGGCATGTAAGCAATGGAGTAATCGTCCTGGAAAAGAGTTTCAATGGAAATTTCTTCCTTCTTGGAAGGAAGACTTTGGTGGGGCGTCACTGGCCATTGAAGAGCGACCATAAGAGGTTATTTCCTGGTCGGGGGGTTGGCCAGAGGGGATTCTTGAAGAACTGGAACCTTTTTAGTGTCAACATTGCAATGGCAGGGACTGGCATCTACCAATTGACAAGAAAAATACAGCATGATTATTTCTCCAAGGAGGAAGTAGCTGTTGCCAAAGAATGA

Protein sequence

MENKLLLGACSSTKCPLMFENECRAMKRRHVSNGVIVLEKSFNGNFFLLGRKTLVGRHWPLKSDHKRLFPGRGVGQRGFLKNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE
BLAST of CsGy1G015780 vs. NCBI nr
Match: XP_011655152.1 (PREDICTED: mitochondrial pyruvate carrier 4 [Cucumis sativus] >XP_011655157.1 PREDICTED: mitochondrial pyruvate carrier 4 [Cucumis sativus] >XP_011655161.1 PREDICTED: mitochondrial pyruvate carrier 4 [Cucumis sativus] >XP_011655168.1 PREDICTED: mitochondrial pyruvate carrier 4 [Cucumis sativus] >KGN65078.1 hypothetical protein Csa_1G195220 [Cucumis sativus])

HSP 1 Score: 83.2 bits (204), Expect = 6.6e-13
Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 0

Query: 81  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE 120
           KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE
Sbjct: 70  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE 108

BLAST of CsGy1G015780 vs. NCBI nr
Match: XP_008458967.1 (PREDICTED: mitochondrial pyruvate carrier 4 [Cucumis melo])

HSP 1 Score: 81.6 bits (200), Expect = 1.9e-12
Identity = 38/39 (97.44%), Postives = 38/39 (97.44%), Query Frame = 0

Query: 81  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE 120
           KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVA AKE
Sbjct: 70  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE 108

BLAST of CsGy1G015780 vs. NCBI nr
Match: XP_022142591.1 (mitochondrial pyruvate carrier 4 [Momordica charantia])

HSP 1 Score: 79.0 bits (193), Expect = 1.2e-11
Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = 0

Query: 81  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE 120
           KNWNLFSVNIAMAGTGIYQLTRKIQHDYFS EEVA AKE
Sbjct: 70  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSGEEVAAAKE 108

BLAST of CsGy1G015780 vs. NCBI nr
Match: XP_022925307.1 (mitochondrial pyruvate carrier 4-like [Cucurbita moschata] >XP_023521103.1 mitochondrial pyruvate carrier 4-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023521104.1 mitochondrial pyruvate carrier 4-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 78.2 bits (191), Expect = 2.1e-11
Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 0

Query: 81  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE 120
           KNWNLFSVN+AMAGTGIYQLTRKIQHDYFSKEEVA  +E
Sbjct: 70  KNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE 108

BLAST of CsGy1G015780 vs. NCBI nr
Match: XP_022927623.1 (mitochondrial pyruvate carrier 4 [Cucurbita moschata] >XP_023520406.1 mitochondrial pyruvate carrier 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 77.8 bits (190), Expect = 2.8e-11
Identity = 35/39 (89.74%), Postives = 36/39 (92.31%), Query Frame = 0

Query: 81  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE 120
           KNWNLFSVN+AMAGTGIYQLTRKIQHDYFSKEEVA   E
Sbjct: 70  KNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVNE 108

BLAST of CsGy1G015780 vs. TAIR10
Match: AT4G22310.1 (Uncharacterised protein family (UPF0041))

HSP 1 Score: 67.0 bits (162), Expect = 8.9e-12
Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0

Query: 81  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE 120
           KNWNLFSVN+AMAGTGIYQL RKI+HDY ++ E AVA E
Sbjct: 70  KNWNLFSVNVAMAGTGIYQLARKIKHDYATEAEPAVASE 108

BLAST of CsGy1G015780 vs. TAIR10
Match: AT4G14695.1 (Uncharacterised protein family (UPF0041))

HSP 1 Score: 63.5 bits (153), Expect = 9.8e-11
Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 0

Query: 81  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE 120
           KNWNLFSVN+AMA TGIYQLTRKI++DY S+ E AV  E
Sbjct: 70  KNWNLFSVNVAMAATGIYQLTRKIKYDYVSEAEAAVEIE 108

BLAST of CsGy1G015780 vs. TAIR10
Match: AT4G05590.2 (Uncharacterised protein family UPF0041 (InterPro:IPR005336))

HSP 1 Score: 58.9 bits (141), Expect = 2.4e-09
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 0

Query: 81  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE 120
           KNWNLFSV++ MA TGIYQLTRKI+HDY  +    VAKE
Sbjct: 108 KNWNLFSVSLGMAVTGIYQLTRKIKHDYVYEANSIVAKE 146

BLAST of CsGy1G015780 vs. Swiss-Prot
Match: sp|O49636|MPC4_ARATH (Mitochondrial pyruvate carrier 4 OS=Arabidopsis thaliana OX=3702 GN=MPC4 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.6e-10
Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0

Query: 81  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE 120
           KNWNLFSVN+AMAGTGIYQL RKI+HDY ++ E AVA E
Sbjct: 70  KNWNLFSVNVAMAGTGIYQLARKIKHDYATEAEPAVASE 108

BLAST of CsGy1G015780 vs. Swiss-Prot
Match: sp|Q8L7H8|MPC2_ARATH (Mitochondrial pyruvate carrier 2 OS=Arabidopsis thaliana OX=3702 GN=MPC2 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-09
Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 0

Query: 81  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE 120
           KNWNLFSVN+AMA TGIYQLTRKI++DY S+ E AV  E
Sbjct: 70  KNWNLFSVNVAMAATGIYQLTRKIKYDYVSEAEAAVEIE 108

BLAST of CsGy1G015780 vs. Swiss-Prot
Match: sp|Q8LD38|MPC3_ARATH (Mitochondrial pyruvate carrier 3 OS=Arabidopsis thaliana OX=3702 GN=MPC3 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 4.4e-08
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 0

Query: 81  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE 120
           KNWNLFSV++ MA TGIYQLTRKI+HDY  +    VAKE
Sbjct: 70  KNWNLFSVSLGMAVTGIYQLTRKIKHDYVYEANSIVAKE 108

BLAST of CsGy1G015780 vs. TrEMBL
Match: tr|A0A0A0LTI1|A0A0A0LTI1_CUCSA (Mitochondrial pyruvate carrier OS=Cucumis sativus OX=3659 GN=Csa_1G195220 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.4e-13
Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 0

Query: 81  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE 120
           KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE
Sbjct: 70  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE 108

BLAST of CsGy1G015780 vs. TrEMBL
Match: tr|A0A1S3C939|A0A1S3C939_CUCME (Mitochondrial pyruvate carrier OS=Cucumis melo OX=3656 GN=LOC103498223 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.3e-12
Identity = 38/39 (97.44%), Postives = 38/39 (97.44%), Query Frame = 0

Query: 81  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE 120
           KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVA AKE
Sbjct: 70  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE 108

BLAST of CsGy1G015780 vs. TrEMBL
Match: tr|A0A2I4DYP3|A0A2I4DYP3_9ROSI (Mitochondrial pyruvate carrier OS=Juglans regia OX=51240 GN=LOC108984679 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.1e-11
Identity = 35/40 (87.50%), Postives = 39/40 (97.50%), Query Frame = 0

Query: 80  LKNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE 120
           LKNWNLFSVNIAMAGTG+YQL+RKI+HDYFS EEVAVA+E
Sbjct: 69  LKNWNLFSVNIAMAGTGLYQLSRKIRHDYFSDEEVAVAQE 108

BLAST of CsGy1G015780 vs. TrEMBL
Match: tr|A9PAU1|A9PAU1_POPTR (Mitochondrial pyruvate carrier OS=Populus trichocarpa OX=3694 GN=POPTR_011G023100v3 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 7.0e-11
Identity = 34/39 (87.18%), Postives = 37/39 (94.87%), Query Frame = 0

Query: 81  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE 120
           KNWNLFSVN+AMA TGIYQL+RKIQHDYFS+EE AVAKE
Sbjct: 70  KNWNLFSVNVAMAATGIYQLSRKIQHDYFSEEEAAVAKE 108

BLAST of CsGy1G015780 vs. TrEMBL
Match: tr|A0A2G9HUZ1|A0A2G9HUZ1_9LAMI (Mitochondrial pyruvate carrier OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05973 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 9.1e-11
Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 0

Query: 81  KNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE 120
           KNWNLFSVN+ MAGTGIYQLTRKI+HDYF++EE AVAKE
Sbjct: 70  KNWNLFSVNVVMAGTGIYQLTRKIRHDYFNEEEAAVAKE 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011655152.16.6e-13100.00PREDICTED: mitochondrial pyruvate carrier 4 [Cucumis sativus] >XP_011655157.1 PR... [more]
XP_008458967.11.9e-1297.44PREDICTED: mitochondrial pyruvate carrier 4 [Cucumis melo][more]
XP_022142591.11.2e-1194.87mitochondrial pyruvate carrier 4 [Momordica charantia][more]
XP_022925307.12.1e-1189.74mitochondrial pyruvate carrier 4-like [Cucurbita moschata] >XP_023521103.1 mitoc... [more]
XP_022927623.12.8e-1189.74mitochondrial pyruvate carrier 4 [Cucurbita moschata] >XP_023520406.1 mitochondr... [more]
Match NameE-valueIdentityDescription
AT4G22310.18.9e-1276.92Uncharacterised protein family (UPF0041)[more]
AT4G14695.19.8e-1174.36Uncharacterised protein family (UPF0041)[more]
AT4G05590.22.4e-0969.23Uncharacterised protein family UPF0041 (InterPro:IPR005336)[more]
Match NameE-valueIdentityDescription
sp|O49636|MPC4_ARATH1.6e-1076.92Mitochondrial pyruvate carrier 4 OS=Arabidopsis thaliana OX=3702 GN=MPC4 PE=3 SV... [more]
sp|Q8L7H8|MPC2_ARATH1.8e-0974.36Mitochondrial pyruvate carrier 2 OS=Arabidopsis thaliana OX=3702 GN=MPC2 PE=3 SV... [more]
sp|Q8LD38|MPC3_ARATH4.4e-0869.23Mitochondrial pyruvate carrier 3 OS=Arabidopsis thaliana OX=3702 GN=MPC3 PE=2 SV... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0LTI1|A0A0A0LTI1_CUCSA4.4e-13100.00Mitochondrial pyruvate carrier OS=Cucumis sativus OX=3659 GN=Csa_1G195220 PE=3 S... [more]
tr|A0A1S3C939|A0A1S3C939_CUCME1.3e-1297.44Mitochondrial pyruvate carrier OS=Cucumis melo OX=3656 GN=LOC103498223 PE=3 SV=1[more]
tr|A0A2I4DYP3|A0A2I4DYP3_9ROSI3.1e-1187.50Mitochondrial pyruvate carrier OS=Juglans regia OX=51240 GN=LOC108984679 PE=3 SV... [more]
tr|A9PAU1|A9PAU1_POPTR7.0e-1187.18Mitochondrial pyruvate carrier OS=Populus trichocarpa OX=3694 GN=POPTR_011G02310... [more]
tr|A0A2G9HUZ1|A0A2G9HUZ1_9LAMI9.1e-1184.62Mitochondrial pyruvate carrier OS=Handroanthus impetiginosus OX=429701 GN=CDL12_... [more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006850mitochondrial pyruvate transport
Vocabulary: Cellular Component
TermDefinition
GO:0005743mitochondrial inner membrane
Vocabulary: INTERPRO
TermDefinition
IPR005336MPC
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006850 mitochondrial pyruvate transport
cellular_component GO:0031305 integral component of mitochondrial inner membrane
cellular_component GO:0005743 mitochondrial inner membrane
molecular_function GO:0050833 pyruvate transmembrane transporter activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G015780.1CsGy1G015780.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005336Mitochondrial pyruvate carrierPFAMPF03650MPCcoord: 81..115
e-value: 5.8E-5
score: 23.1