CsGy1G015780 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAACAAACTTCTGCTTGGCGCATGTTCTTCAACAAAATGTCCTTTGATGTTTGAAAATGAGTGTAGGGCTATGAAACGTAGGCATGTAAGCAATGGAGTAATCGTCCTGGAAAAGAGGTCAATGTTGACTTTGTTGCCCGAAGTCTAAATTGGAAGGGATGAACCTAAATGAGTTTTCCTTCATTCTGATGATAACTTCAACCATATCAAGGAGAGATGATGGTTTTTTTTTGTTGCAATTTCACAAATCCCTCCACAAGCGCCTCCAATGAACTAAATTATATCAAGACTCCATTTTGTCCTGAAGAAGGGGTCTGATGTTCCTTTGGGTGGTCAGGGTGATTACTTGATGCATTCTGTAGGATTCTTTGTTGGAAGTTAAGTGGGAAGGGACATTAATGGAGGTTGGTGTAGGTGTAGTGGTTGGTGGGAAGTCTTTAAAAATATTCCAGCCTTTCTGTTTTCACCGCTGGGACAAATCAACTTTGCGCATCAACCATTTTCTTCCAGCTTAGTAGTCTCTGCACAGTGCCCCATTCTGCTCGATAACTTCTCAACCGACATGCCATCCTTTTTTCTTTAAAGAGTTTTTGAATGAAAGGGACTCCATGAGGCTAATGAGGGTAGATAAAAGCTAGGCTGGAAACTCCACTGAATAGAGGAGAAAGTAGTGTCTTCGGTGTTCAGTAACTAACTCTGCTTCCTTTTCAAGCTTGGTCAGTTTCAATGGAAATTTCTTCCTTCTTGGAAGGAAGACTTTGGTGGGGCGTCACTGGCCATTGAAGAGCGACCATAAGAGGTTATTTCCTGGTCGGGGGGTTGGCCAGAGGGGATTCTTGGTTAGGTAGGATCATGGATGTAGAGAGAGGTCTTCAATATTATGTGCTGACTTTGACAGTGGTGTGAAAAACATACATAAACAATAAATAATAAGATTAAAAGTCAATTGACGCTGAGTTCTTATTTTATCCCTTTAAGTACCTTCATCAATCAATAGGATTAAACCTTATCTTAGCTAATGGCTACACTTTCTAGCTCTGAATATCTTTTTTGTTTCTGGAAAATGCAGAAGAACTGGAACCTTTTTAGTGTCAACATTGCAATGGCAGGGACTGGCATCTACCAATTGACAAGAAAAATACAGTAAGTCATCTCTCACTTCTTCAGGCTCATGAAGAAAAACATTTCTCAGCATTGATTCTAGTGGGTCAAGGGGATTTTGTTGTGATCTAAAATTAGTAATAAGTACAAGCTTTATGTTTACGTTATCGACATTTTTAACTTAGAGCCTAATTTTCATGTGAATATGCTATTTGCATTTTTTCAACTTTATTTTATCTTTTTTGCATCAATCATGTGCATCTTTGCCACTAGTTTTAGAATGTACTTTTGAATATTAAGTCCGCAAAACTTTTTAAATCTAAGATGTAAAAGGAAGAACCTTCCATACGGACTAGTTGGTCTCCATGTGATTTTGTTTCATGGCAACTAATCACTTTCATCTTCATTGAGGCAAATTTTATACTTGATAGAAATTAGACTTCAATTGTATTTATGTTTTCTTGAATGTGAACCTTAATATATTCACACAAAATAATGGTGTAAAAAAATGAACGTACGAGACTCCCCATTTAGGAATATATTAGGATTATCAGTATGTTTATAAGTGGGGGCATATTAACAAATAACTAAGGAGTTCGTTAGGGTTATAAATAGAGACAGTGGGATTGGAGCAAAATTGGAAGGGTTTCAGAAGTTGACTTTGGAAGAGAAATCTCACGAGAGGCTCCTATTATATTATAGTTTCCCTTGTATTTCAATAATTTTTTTCGAGTGTTCATGTGTTTCTTTGTATTCTTAGAGTTGTATCCTAACCCATTCGATGATTATAACAAAATGTTAACAAGCTTTAACGTAACTAAAAGAAATATTTGTTAGAAAAGTGAGTTTAGAAAGATATAACCACTGTATTTTACCTTGAACTTTGCTGAGTTCTTAGTTGGATATTTTGGTAGGATTGTTTGTGATTGATCGATCTTCTCTTTACTAATTTTACATTTCATTTGCAAAATGGTTGTAACAGGCATGATTATTTCTCCAAGGAGGAAGTAGCTGTTGCCAAAGAATGACGACGAAATATGATCTATTCTTCATTTATCTCTGTGACGATCAAAATTTCCCTTACTTTTTCATGCATCTCCTCCTCCAATTCTGACCTACCAAAGTCTCTATGACTTCTCCTTTATTTTCAATCAATTTATCTTTCTTTATTTTACTTTTGTAGCTATGCCACTATGCTTGAAACTGTTCGGAAAAATAAATAAGATCCTAT ATGGAGAACAAACTTCTGCTTGGCGCATGTTCTTCAACAAAATGTCCTTTGATGTTTGAAAATGAGTGTAGGGCTATGAAACGTAGGCATGTAAGCAATGGAGTAATCGTCCTGGAAAAGAGTTTCAATGGAAATTTCTTCCTTCTTGGAAGGAAGACTTTGGTGGGGCGTCACTGGCCATTGAAGAGCGACCATAAGAGGTTATTTCCTGGTCGGGGGGTTGGCCAGAGGGGATTCTTGAAGAACTGGAACCTTTTTAGTGTCAACATTGCAATGGCAGGGACTGGCATCTACCAATTGACAAGAAAAATACAGCATGATTATTTCTCCAAGGAGGAAGTAGCTGTTGCCAAAGAATGACGACGAAATATGATCTATTCTTCATTTATCTCTGTGACGATCAAAATTTCCCTTACTTTTTCATGCATCTCCTCCTCCAATTCTGACCTACCAAAGTCTCTATGACTTCTCCTTTATTTTCAATCAATTTATCTTTCTTTATTTTACTTTTGTAGCTATGCCACTATGCTTGAAACTGTTCGGAAAAATAAATAAGATCCTAT ATGGAGAACAAACTTCTGCTTGGCGCATGTTCTTCAACAAAATGTCCTTTGATGTTTGAAAATGAGTGTAGGGCTATGAAACGTAGGCATGTAAGCAATGGAGTAATCGTCCTGGAAAAGAGTTTCAATGGAAATTTCTTCCTTCTTGGAAGGAAGACTTTGGTGGGGCGTCACTGGCCATTGAAGAGCGACCATAAGAGGTTATTTCCTGGTCGGGGGGTTGGCCAGAGGGGATTCTTGAAGAACTGGAACCTTTTTAGTGTCAACATTGCAATGGCAGGGACTGGCATCTACCAATTGACAAGAAAAATACAGCATGATTATTTCTCCAAGGAGGAAGTAGCTGTTGCCAAAGAATGA MENKLLLGACSSTKCPLMFENECRAMKRRHVSNGVIVLEKSFNGNFFLLGRKTLVGRHWPLKSDHKRLFPGRGVGQRGFLKNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE
BLAST of CsGy1G015780 vs. NCBI nr
Match: XP_011655152.1 (PREDICTED: mitochondrial pyruvate carrier 4 [Cucumis sativus] >XP_011655157.1 PREDICTED: mitochondrial pyruvate carrier 4 [Cucumis sativus] >XP_011655161.1 PREDICTED: mitochondrial pyruvate carrier 4 [Cucumis sativus] >XP_011655168.1 PREDICTED: mitochondrial pyruvate carrier 4 [Cucumis sativus] >KGN65078.1 hypothetical protein Csa_1G195220 [Cucumis sativus]) HSP 1 Score: 83.2 bits (204), Expect = 6.6e-13 Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 0
BLAST of CsGy1G015780 vs. NCBI nr
Match: XP_008458967.1 (PREDICTED: mitochondrial pyruvate carrier 4 [Cucumis melo]) HSP 1 Score: 81.6 bits (200), Expect = 1.9e-12 Identity = 38/39 (97.44%), Postives = 38/39 (97.44%), Query Frame = 0
BLAST of CsGy1G015780 vs. NCBI nr
Match: XP_022142591.1 (mitochondrial pyruvate carrier 4 [Momordica charantia]) HSP 1 Score: 79.0 bits (193), Expect = 1.2e-11 Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = 0
BLAST of CsGy1G015780 vs. NCBI nr
Match: XP_022925307.1 (mitochondrial pyruvate carrier 4-like [Cucurbita moschata] >XP_023521103.1 mitochondrial pyruvate carrier 4-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023521104.1 mitochondrial pyruvate carrier 4-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 78.2 bits (191), Expect = 2.1e-11 Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 0
BLAST of CsGy1G015780 vs. NCBI nr
Match: XP_022927623.1 (mitochondrial pyruvate carrier 4 [Cucurbita moschata] >XP_023520406.1 mitochondrial pyruvate carrier 4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 77.8 bits (190), Expect = 2.8e-11 Identity = 35/39 (89.74%), Postives = 36/39 (92.31%), Query Frame = 0
BLAST of CsGy1G015780 vs. TAIR10
Match: AT4G22310.1 (Uncharacterised protein family (UPF0041)) HSP 1 Score: 67.0 bits (162), Expect = 8.9e-12 Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0
BLAST of CsGy1G015780 vs. TAIR10
Match: AT4G14695.1 (Uncharacterised protein family (UPF0041)) HSP 1 Score: 63.5 bits (153), Expect = 9.8e-11 Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 0
BLAST of CsGy1G015780 vs. TAIR10
Match: AT4G05590.2 (Uncharacterised protein family UPF0041 (InterPro:IPR005336)) HSP 1 Score: 58.9 bits (141), Expect = 2.4e-09 Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 0
BLAST of CsGy1G015780 vs. Swiss-Prot
Match: sp|O49636|MPC4_ARATH (Mitochondrial pyruvate carrier 4 OS=Arabidopsis thaliana OX=3702 GN=MPC4 PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.6e-10 Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0
BLAST of CsGy1G015780 vs. Swiss-Prot
Match: sp|Q8L7H8|MPC2_ARATH (Mitochondrial pyruvate carrier 2 OS=Arabidopsis thaliana OX=3702 GN=MPC2 PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.8e-09 Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 0
BLAST of CsGy1G015780 vs. Swiss-Prot
Match: sp|Q8LD38|MPC3_ARATH (Mitochondrial pyruvate carrier 3 OS=Arabidopsis thaliana OX=3702 GN=MPC3 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.4e-08 Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 0
BLAST of CsGy1G015780 vs. TrEMBL
Match: tr|A0A0A0LTI1|A0A0A0LTI1_CUCSA (Mitochondrial pyruvate carrier OS=Cucumis sativus OX=3659 GN=Csa_1G195220 PE=3 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 4.4e-13 Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 0
BLAST of CsGy1G015780 vs. TrEMBL
Match: tr|A0A1S3C939|A0A1S3C939_CUCME (Mitochondrial pyruvate carrier OS=Cucumis melo OX=3656 GN=LOC103498223 PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.3e-12 Identity = 38/39 (97.44%), Postives = 38/39 (97.44%), Query Frame = 0
BLAST of CsGy1G015780 vs. TrEMBL
Match: tr|A0A2I4DYP3|A0A2I4DYP3_9ROSI (Mitochondrial pyruvate carrier OS=Juglans regia OX=51240 GN=LOC108984679 PE=3 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.1e-11 Identity = 35/40 (87.50%), Postives = 39/40 (97.50%), Query Frame = 0
BLAST of CsGy1G015780 vs. TrEMBL
Match: tr|A9PAU1|A9PAU1_POPTR (Mitochondrial pyruvate carrier OS=Populus trichocarpa OX=3694 GN=POPTR_011G023100v3 PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 7.0e-11 Identity = 34/39 (87.18%), Postives = 37/39 (94.87%), Query Frame = 0
BLAST of CsGy1G015780 vs. TrEMBL
Match: tr|A0A2G9HUZ1|A0A2G9HUZ1_9LAMI (Mitochondrial pyruvate carrier OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05973 PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 9.1e-11 Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |