CsGy1G015040 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G015040
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionpollen-specific leucine-rich repeat extensin-like protein 1
LocationChr1 : 10937372 .. 10938582 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TATCTCTTTCCTCTAACTACCATCGCCTTCTCTGATTCAGATGCCATTTGGGTCTAATTCATTGCGCCTTTTTCTTTTTCTCTTCTCTTCTGTACAGCCGACATTTTCCCCAACACAGCAACTCAGACTCATCCATGGCGGACGATGGCAAGGTCATTATTCTTCTCATGGACGAACTCATTTCACATAATTCTCATGCAACCCTTTTCATTTTCTGTTCTGATCGACATACACTTCTTTTTTGAGTTTTATATCCTCTGTTTTTTTAAACTATTATTTTTGCAGAAAGTTGTGGTCATGATGCTTAAAGTGGACTTGCAGTGTGATCGTTGCTACAAGAAAGTCAAGAAAGTTCTCTGCAAATTCCCACGTGAGTTCTTTTCTATTTCTCTTTTAATTTTCTTTCTCAAAATGGATTATTTTTAAAATTTATTTTCTTCTTTTCAACAACAGAAATTCGAGACCAGATTTATGATGAAAAGCAAAACCTTGTGATTATCAAGGTGGTTTGTTGCAATCCTGAGAAGCTTAGAGATAAAATTTGTTGTAAGGGATGTGGGGTTATTAAAAGCATTGAAATCAAAGAGCCTGAACCTCCCAAGCCTCCTCCGCCCAAGCCCGCCGATCCTCCACCACCCAAAAAAGTCGATCCTCCCCCTTCCAAAAAACCTGATCCACCCCCACCTCAAAAGGTTGATCCTCCGCCTCCCAAAAAAGCCGATCCTCCGCCTCCCAAAAAAGCCGATCCCCCACCCCCCAAAAAGGCCGACACACCACCACCCAGTAAAGCCGCCGACCCTCCTCCGCCCCAAAAGGCAGCCGATCCACCTCCGCCCAAAAAGGCGGACCCACCTCCGCCCAAAAAGGCGGACCCTCCTCCGCCCAAAAAGGTTGACCCACCACCCCCGAAAGCGAACCCTCCGCCTCCAAAGAAGGTGGATCCTCCGCCGGTAGTCGTCCCACAGCCCACCCCGGTTCCCATACCGGTGCCGGTTCAACCGGAGCCGTACCCGGTCAATATGTGCGTGCCGGTTCCGGGTTATCCGCCCGGTTACCCTATTGGGGTGTGCTGTAGGCAGTGCCATGAAGGGAGGGGTGGGGGCCCATGTTATAGTGGGTTTGGTGGGCCAGGCCCATGTTGCGATGGGTGTGCTTCTGGAAGGCCTATTTACGATAGTTACGGTGGAGGGAGGCCCTGTTACGTTAGCCAC

mRNA sequence

TATCTCTTTCCTCTAACTACCATCGCCTTCTCTGATTCAGATGCCATTTGGGTCTAATTCATTGCGCCTTTTTCTTTTTCTCTTCTCTTCTGTACAGCCGACATTTTCCCCAACACAGCAACTCAGACTCATCCATGGCGGACGATGGCAAGAAAGTTGTGGTCATGATGCTTAAAGTGGACTTGCAGTGTGATCGTTGCTACAAGAAAGTCAAGAAAGTTCTCTGCAAATTCCCACAAATTCGAGACCAGATTTATGATGAAAAGCAAAACCTTGTGATTATCAAGGTGGTTTGTTGCAATCCTGAGAAGCTTAGAGATAAAATTTGTTGTAAGGGATGTGGGGTTATTAAAAGCATTGAAATCAAAGAGCCTGAACCTCCCAAGCCTCCTCCGCCCAAGCCCGCCGATCCTCCACCACCCAAAAAAGTCGATCCTCCCCCTTCCAAAAAACCTGATCCACCCCCACCTCAAAAGGTTGATCCTCCGCCTCCCAAAAAAGCCGATCCTCCGCCTCCCAAAAAAGCCGATCCCCCACCCCCCAAAAAGGCCGACACACCACCACCCAGTAAAGCCGCCGACCCTCCTCCGCCCCAAAAGGCAGCCGATCCACCTCCGCCCAAAAAGGCGGACCCACCTCCGCCCAAAAAGGCGGACCCTCCTCCGCCCAAAAAGGTTGACCCACCACCCCCGAAAGCGAACCCTCCGCCTCCAAAGAAGGTGGATCCTCCGCCGGTAGTCGTCCCACAGCCCACCCCGGTTCCCATACCGGTGCCGGTTCAACCGGAGCCGTACCCGGTCAATATGTGCGTGCCGGTTCCGGGTTATCCGCCCGGTTACCCTATTGGGGTGTGCTGTAGGCAGTGCCATGAAGGGAGGGGTGGGGGCCCATGTTATAGTGGGTTTGGTGGGCCAGGCCCATGTTGCGATGGGTGTGCTTCTGGAAGGCCTATTTACGATAGTTACGGTGGAGGGAGGCCCTGTTACGTTAGCCAC

Coding sequence (CDS)

ATGGCGGACGATGGCAAGAAAGTTGTGGTCATGATGCTTAAAGTGGACTTGCAGTGTGATCGTTGCTACAAGAAAGTCAAGAAAGTTCTCTGCAAATTCCCACAAATTCGAGACCAGATTTATGATGAAAAGCAAAACCTTGTGATTATCAAGGTGGTTTGTTGCAATCCTGAGAAGCTTAGAGATAAAATTTGTTGTAAGGGATGTGGGGTTATTAAAAGCATTGAAATCAAAGAGCCTGAACCTCCCAAGCCTCCTCCGCCCAAGCCCGCCGATCCTCCACCACCCAAAAAAGTCGATCCTCCCCCTTCCAAAAAACCTGATCCACCCCCACCTCAAAAGGTTGATCCTCCGCCTCCCAAAAAAGCCGATCCTCCGCCTCCCAAAAAAGCCGATCCCCCACCCCCCAAAAAGGCCGACACACCACCACCCAGTAAAGCCGCCGACCCTCCTCCGCCCCAAAAGGCAGCCGATCCACCTCCGCCCAAAAAGGCGGACCCACCTCCGCCCAAAAAGGCGGACCCTCCTCCGCCCAAAAAGGTTGACCCACCACCCCCGAAAGCGAACCCTCCGCCTCCAAAGAAGGTGGATCCTCCGCCGGTAGTCGTCCCACAGCCCACCCCGGTTCCCATACCGGTGCCGGTTCAACCGGAGCCGTACCCGGTCAATATGTGCGTGCCGGTTCCGGGTTATCCGCCCGGTTACCCTATTGGGGTGTGCTGTAGGCAGTGCCATGAAGGGAGGGGTGGGGGCCCATGTTATAGTGGGTTTGGTGGGCCAGGCCCATGTTGCGATGGGTGTGCTTCTGGAAGGCCTATTTACGATAGTTACGGTGGAGGGAGGCCCTGTTACGTTAGCCAC

Protein sequence

MADDGKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKICCKGCGVIKSIEIKEPEPPKPPPPKPADPPPPKKVDPPPSKKPDPPPPQKVDPPPPKKADPPPPKKADPPPPKKADTPPPSKAADPPPPQKAADPPPPKKADPPPPKKADPPPPKKVDPPPPKANPPPPKKVDPPPVVVPQPTPVPIPVPVQPEPYPVNMCVPVPGYPPGYPIGVCCRQCHEGRGGGPCYSGFGGPGPCCDGCASGRPIYDSYGGGRPCYVSH
Homology
[Close]
BLAST of CsGy1G015040 vs. NCBI nr
Match: XP_004139513.1 (PREDICTED: basic proline-rich protein-like [Cucumis sativus] >KGN64988.1 hypothetical protein Csa_1G172590 [Cucumis sativus])

HSP 1 Score: 178.7 bits (452), Expect = 2.8e-41
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0 

Query: 1  MADDGKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKL 60
          MADDGKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKL
Sbjct: 1  MADDGKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKL 60

Query: 61 RDKICCKGCGVIKSIEIKEPEPPKP 86
          RDKICCKGCGVIKSIEIKEPEPPKP
Sbjct: 61 RDKICCKGCGVIKSIEIKEPEPPKP 85

[Close]
BLAST of CsGy1G015040 vs. NCBI nr
Match: XP_008464282.1 (PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo])

HSP 1 Score: 176.4 bits (446), Expect = 1.4e-40
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MADDGKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKL 60
          MADDGKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKL
Sbjct: 1  MADDGKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKL 60

Query: 61 RDKICCKGCGVIKSIEIKEPEPPK 85
          RDKICCKGCGVIKSIEIKEPEPPK
Sbjct: 61 RDKICCKGCGVIKSIEIKEPEPPK 84

[Close]
BLAST of CsGy1G015040 vs. NCBI nr
Match: XP_022927595.1 (protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X10 [Cucurbita moschata])

HSP 1 Score: 160.2 bits (404), Expect = 1.0e-35
Identity = 76/82 (92.68%), Postives = 77/82 (93.90%), Query Frame = 0 

Query: 4  DGKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDK 63
          D KK VVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDK
Sbjct: 3  DAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDK 62

Query: 64 ICCKGCGVIKSIEIKEPEPPKP 86
          ICCKGCGVIKSIEIK  +PP P
Sbjct: 63 ICCKGCGVIKSIEIKPADPPPP 84

[Close]
BLAST of CsGy1G015040 vs. NCBI nr
Match: XP_022927592.1 (leucine-rich repeat extensin-like protein 3 isoform X7 [Cucurbita moschata])

HSP 1 Score: 160.2 bits (404), Expect = 1.0e-35
Identity = 76/82 (92.68%), Postives = 77/82 (93.90%), Query Frame = 0 

Query: 4  DGKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDK 63
          D KK VVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDK
Sbjct: 3  DAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDK 62

Query: 64 ICCKGCGVIKSIEIKEPEPPKP 86
          ICCKGCGVIKSIEIK  +PP P
Sbjct: 63 ICCKGCGVIKSIEIKPADPPPP 84

[Close]
BLAST of CsGy1G015040 vs. NCBI nr
Match: XP_022927597.1 (leucine-rich repeat extensin-like protein 3 isoform X11 [Cucurbita moschata])

HSP 1 Score: 160.2 bits (404), Expect = 1.0e-35
Identity = 76/82 (92.68%), Postives = 77/82 (93.90%), Query Frame = 0 

Query: 4  DGKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDK 63
          D KK VVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDK
Sbjct: 3  DAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDK 62

Query: 64 ICCKGCGVIKSIEIKEPEPPKP 86
          ICCKGCGVIKSIEIK  +PP P
Sbjct: 63 ICCKGCGVIKSIEIKPADPPPP 84

[Close]
BLAST of CsGy1G015040 vs. TAIR10
Match: AT4G16380.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 112.1 bits (279), Expect = 5.8e-25
Identity = 53/75 (70.67%), Postives = 64/75 (85.33%), Query Frame = 0 

Query: 1  MADDGK-KVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEK 60
          MA+ GK KV +M LKVDL C +CYKKVKKVLCKFPQIRDQ++DEK N+VIIKVVCC+PE+
Sbjct: 1  MAEKGKEKVTMMKLKVDLDCAKCYKKVKKVLCKFPQIRDQLFDEKSNIVIIKVVCCSPER 60

Query: 61 LRDKICCKGCGVIKS 75
          + DK+C KG G IK+
Sbjct: 61 IMDKLCSKGGGSIKT 75

[Close]
BLAST of CsGy1G015040 vs. TAIR10
Match: AT1G51090.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 100.5 bits (249), Expect = 1.8e-21
Identity = 48/75 (64.00%), Postives = 60/75 (80.00%), Query Frame = 0 

Query: 6  KKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 65
          +KVV+M LKVDL C +CYKKVKK + KFPQI D+++DEK N +IIKVVC +PE+L +K+C
Sbjct: 3  EKVVMMKLKVDLNCSKCYKKVKKAIRKFPQITDELFDEKSNTIIIKVVCYDPERLMNKLC 62

Query: 66 CKGCGVIKSIEIKEP 81
           KG G IKSI I EP
Sbjct: 63 YKGDGSIKSIVILEP 77

[Close]
BLAST of CsGy1G015040 vs. TAIR10
Match: AT1G49420.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 5.5e-15
Identity = 43/82 (52.44%), Postives = 56/82 (68.29%), Query Frame = 0 

Query: 1  MADDGK-KVVVMMLKVD-LQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPE 60
          MA+ GK KV  M LK + L  ++ + KVKK L   PQ+RDQ ++E+ N V IKVVCC+PE
Sbjct: 1  MAEKGKEKVTWMKLKTEPLSNEKNFSKVKKALSSIPQVRDQKFEEETNTVTIKVVCCSPE 60

Query: 61 KLRDKICCKGCGVIKSIEIKEP 81
          K+ DK+C KG G IK IE  +P
Sbjct: 61 KVMDKLCSKGRGAIKLIETIDP 82

[Close]
BLAST of CsGy1G015040 vs. Swiss-Prot
Match: sp|A2XT03|PI21_ORYSI (Protein PYRICULARIA ORYZAE RESISTANCE 21 OS=Oryza sativa subsp. indica OX=39946 GN=PI21 PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.4e-04
Identity = 32/77 (41.56%), Postives = 44/77 (57.14%), Query Frame = 0 

Query: 10 VMMLKVDLQCDRCYKKVKKVLCKFPQ---IRDQIYDEKQNLVIIKVVCCNPEKLRDKICC 69
          ++++ VDLQC RC  K++KVL    +   I    YD K N VI++    +PEKL  KI C
Sbjct: 3  ILVISVDLQCCRCDAKIRKVLGCLEEEYCIEKVEYDVKNNRVIVRGK-FDPEKLCKKIWC 62

Query: 70 KGCGVIKSIEIKEPEPP 84
          K   +IK I I +  PP
Sbjct: 63 KAGKIIKEILIVDVWPP 78

[Close]
BLAST of CsGy1G015040 vs. Swiss-Prot
Match: sp|Q7XL73|PI21_ORYSJ (Protein PYRICULARIA ORYZAE RESISTANCE 21 OS=Oryza sativa subsp. japonica OX=39947 GN=PI21 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 4.1e-04
Identity = 32/77 (41.56%), Postives = 44/77 (57.14%), Query Frame = 0 

Query: 10 VMMLKVDLQCDRCYKKVKKVLCKFPQ---IRDQIYDEKQNLVIIKVVCCNPEKLRDKICC 69
          ++++ VDLQC RC  K++KVL    +   I    YD K N VI++    +PEKL  KI C
Sbjct: 3  ILVILVDLQCCRCDAKIRKVLGCLEEEYCIEKVEYDVKNNRVIVRGK-FDPEKLCKKIWC 62

Query: 70 KGCGVIKSIEIKEPEPP 84
          K   +IK I I +  PP
Sbjct: 63 KAGKIIKEILIVDVWPP 78

[Close]
BLAST of CsGy1G015040 vs. TrEMBL
Match: tr|A0A0A0LTA1|A0A0A0LTA1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172590 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.8e-41
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0 

Query: 1  MADDGKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKL 60
          MADDGKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKL
Sbjct: 1  MADDGKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKL 60

Query: 61 RDKICCKGCGVIKSIEIKEPEPPKP 86
          RDKICCKGCGVIKSIEIKEPEPPKP
Sbjct: 61 RDKICCKGCGVIKSIEIKEPEPPKP 85

[Close]
BLAST of CsGy1G015040 vs. TrEMBL
Match: tr|A0A1S3CL41|A0A1S3CL41_CUCME (leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103502210 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 9.2e-41
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MADDGKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKL 60
          MADDGKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKL
Sbjct: 1  MADDGKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKL 60

Query: 61 RDKICCKGCGVIKSIEIKEPEPPK 85
          RDKICCKGCGVIKSIEIKEPEPPK
Sbjct: 61 RDKICCKGCGVIKSIEIKEPEPPK 84

[Close]
BLAST of CsGy1G015040 vs. TrEMBL
Match: tr|M5WHC4|M5WHC4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G004900 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.2e-29
Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 0 

Query: 6  KKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 65
          +K  +M+LKVDLQC +CYKKVKKVLCKFPQIRDQIYDEKQN V+IKVVCC+PEK+RD+IC
Sbjct: 5  EKETIMVLKVDLQCHKCYKKVKKVLCKFPQIRDQIYDEKQNQVVIKVVCCSPEKIRDRIC 64

Query: 66 CKGCGVIKSIEIKEPEPPKP 86
          CKG G IK IEIKEPE PKP
Sbjct: 65 CKGGGAIKGIEIKEPEKPKP 84

[Close]
BLAST of CsGy1G015040 vs. TrEMBL
Match: tr|A0A1S2YNR7|A0A1S2YNR7_CICAR (proline-rich protein 2 OS=Cicer arietinum OX=3827 GN=LOC101498654 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.6e-29
Identity = 62/77 (80.52%), Postives = 69/77 (89.61%), Query Frame = 0 

Query: 7  KVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKICC 66
          KV +M LKVDLQCD+CYKKVKKVLCKFPQIRDQ+YDEK N+V I VVCC+PEK+RDK+CC
Sbjct: 6  KVTIMKLKVDLQCDKCYKKVKKVLCKFPQIRDQVYDEKNNIVTITVVCCSPEKIRDKLCC 65

Query: 67 KGCGVIKSIEIKEPEPP 84
          KGCG IKSIEI EP PP
Sbjct: 66 KGCGAIKSIEIVEPPPP 82

[Close]
BLAST of CsGy1G015040 vs. TrEMBL
Match: tr|A0A2P6SAW0|A0A2P6SAW0_ROSCH (Putative heavy metal-associated domain, HMA OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0328811 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.8e-29
Identity = 65/80 (81.25%), Postives = 72/80 (90.00%), Query Frame = 0 

Query: 6   KKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 65
           KKV +M+LKVDLQC++CY KVKKVLCKFPQIRDQ YDEK NLVIIKVVCC+PEK+RDK+C
Sbjct: 45  KKVTIMILKVDLQCEKCYWKVKKVLCKFPQIRDQTYDEKNNLVIIKVVCCSPEKIRDKLC 104

Query: 66  CKGCGVIKSIEIKEPEPPKP 86
           CKG G IKSIEIKEPE  KP
Sbjct: 105 CKGGGAIKSIEIKEPEKLKP 124

The following BLAST results are available for this feature:
BLAST of CsGy1G015040 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139513.12.8e-41100.00PREDICTED: basic proline-rich protein-like [Cucumis sativus] >KGN64988.1 hypothe... [more]
XP_008464282.11.4e-40100.00PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo][more]
XP_022927595.11.0e-3592.68protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X10 [Cucurbita moschata][more]
XP_022927592.11.0e-3592.68leucine-rich repeat extensin-like protein 3 isoform X7 [Cucurbita moschata][more]
XP_022927597.11.0e-3592.68leucine-rich repeat extensin-like protein 3 isoform X11 [Cucurbita moschata][more]
BLAST of CsGy1G015040 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G16380.15.8e-2570.67Heavy metal transport/detoxification superfamily protein [more]
AT1G51090.11.8e-2164.00Heavy metal transport/detoxification superfamily protein [more]
AT1G49420.15.5e-1552.44Heavy metal transport/detoxification superfamily protein [more]
BLAST of CsGy1G015040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|A2XT03|PI21_ORYSI2.4e-0441.56Protein PYRICULARIA ORYZAE RESISTANCE 21 OS=Oryza sativa subsp. indica OX=39946 ... [more]
sp|Q7XL73|PI21_ORYSJ4.1e-0441.56Protein PYRICULARIA ORYZAE RESISTANCE 21 OS=Oryza sativa subsp. japonica OX=3994... [more]
BLAST of CsGy1G015040 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LTA1|A0A0A0LTA1_CUCSA1.8e-41100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172590 PE=4 SV=1[more]
tr|A0A1S3CL41|A0A1S3CL41_CUCME9.2e-41100.00leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103502... [more]
tr|M5WHC4|M5WHC4_PRUPE1.2e-2980.00Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G004900 PE=4 SV=1[more]
tr|A0A1S2YNR7|A0A1S2YNR7_CICAR1.6e-2980.52proline-rich protein 2 OS=Cicer arietinum OX=3827 GN=LOC101498654 PE=4 SV=1[more]
tr|A0A2P6SAW0|A0A2P6SAW0_ROSCH2.8e-2981.25Putative heavy metal-associated domain, HMA OS=Rosa chinensis OX=74649 GN=RchiOB... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR036163HMA_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030001 metal ion transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G015040.1CsGy1G015040.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..207
NoneNo IPR availablePANTHERPTHR22814COPPER TRANSPORT PROTEIN ATOX1-RELATEDcoord: 8..150
NoneNo IPR availablePANTHERPTHR22814:SF163METAL ION BINDING PROTEIN-RELATEDcoord: 8..150
IPR036163Heavy metal-associated domain superfamilySUPERFAMILYSSF55008HMA, heavy metal-associated domaincoord: 10..71

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G015040Cla010978Watermelon (97103) v1cgybwmB059
CsGy1G015040Cla014389Watermelon (97103) v1cgybwmB061
CsGy1G015040Csa1G172590Cucumber (Chinese Long) v2cgybcuB001
CsGy1G015040Csa6G511040Cucumber (Chinese Long) v2cgybcuB045
CsGy1G015040MELO3C026077Melon (DHL92) v3.5.1cgybmeB016
CsGy1G015040ClCG01G021270Watermelon (Charleston Gray)cgybwcgB026
CsGy1G015040ClCG01G011010Watermelon (Charleston Gray)cgybwcgB019
CsGy1G015040CSPI06G32830Wild cucumber (PI 183967)cgybcpiB042
CsGy1G015040CSPI01G15270Wild cucumber (PI 183967)cgybcpiB001
CsGy1G015040CmaCh18G006120Cucurbita maxima (Rimu)cgybcmaB089
CsGy1G015040Lsi02G011540Bottle gourd (USVL1VR-Ls)cgyblsiB023
CsGy1G015040Lsi01G004970Bottle gourd (USVL1VR-Ls)cgyblsiB014
CsGy1G015040MELO3C026077.2Melon (DHL92) v3.6.1cgybmedB015
CsGy1G015040CsaV3_1G015440Cucumber (Chinese Long) v3cgybcucB002
CsGy1G015040Cla97C01G010740Watermelon (97103) v2cgybwmbB008
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G015040Wax gourdcgybwgoB032
CsGy1G015040Wax gourdcgybwgoB042
CsGy1G015040Cucumber (Gy14) v2cgybcgybB036
CsGy1G015040Cucurbita maxima (Rimu)cgybcmaB068
CsGy1G015040Cucurbita maxima (Rimu)cgybcmaB078
CsGy1G015040Cucurbita maxima (Rimu)cgybcmaB095
CsGy1G015040Cucurbita maxima (Rimu)cgybcmaB128
CsGy1G015040Cucurbita moschata (Rifu)cgybcmoB072
CsGy1G015040Cucurbita moschata (Rifu)cgybcmoB096
CsGy1G015040Cucurbita moschata (Rifu)cgybcmoB118
CsGy1G015040Cucurbita pepo (Zucchini)cgybcpeB007
CsGy1G015040Cucurbita pepo (Zucchini)cgybcpeB024
CsGy1G015040Cucurbita pepo (Zucchini)cgybcpeB077
CsGy1G015040Cucumber (Chinese Long) v2cgybcuB041
CsGy1G015040Bottle gourd (USVL1VR-Ls)cgyblsiB016
CsGy1G015040Bottle gourd (USVL1VR-Ls)cgyblsiB029
CsGy1G015040Bottle gourd (USVL1VR-Ls)cgyblsiB038
CsGy1G015040Melon (DHL92) v3.5.1cgybmeB028
CsGy1G015040Melon (DHL92) v3.6.1cgybmedB009
CsGy1G015040Watermelon (Charleston Gray)cgybwcgB018
CsGy1G015040Watermelon (Charleston Gray)cgybwcgB021
CsGy1G015040Watermelon (97103) v1cgybwmB048
CsGy1G015040Watermelon (97103) v1cgybwmB043
CsGy1G015040Wild cucumber (PI 183967)cgybcpiB038
CsGy1G015040Silver-seed gourdcarcgybB0408
CsGy1G015040Cucumber (Chinese Long) v3cgybcucB046
CsGy1G015040Watermelon (97103) v2cgybwmbB006
CsGy1G015040Watermelon (97103) v2cgybwmbB009