CsGy1G014030 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G014030
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	NDR1/HIN1-like protein 12
Location	Chr1 : 9647859 .. 9649442 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCATCAATATAATATATCATCCGTTCACTTAAACATCAAAAAGAAAATATATCAAAACCACCGAAAAGTGAAAAAGTGCTGAAAAGAAAAAAACAGATGAGGAGCAATGGTAAAGCAGGAGAACCACCACCACCACCATCATCATCATCATCAAAAGAAATGTCCTATGTAATAAAACATGGGACCGCAAAAAGAACAAGGGTGTTGAGAATCACAGGAAGAACCTTATTGGGTTTAATGATTCTTGTGGCTATCGCAATGATTATATGTTGGCTTATTGTGTTTCCCAGAAACCCAGATATCATTGTGGAAACTGGCCAAGTTATACCCCATAGTTTAACTGATAGAAAGTTGAATGCGACCATAGCTTTTACTGTTACAAGCTATAACCCTAACAAAAAAGCCTCCATTCGTATGGATTCCATGAGGATGATAGTTAGTGATATGGGGTTGTCGTTTTGGTCCGACATCCCCAGCTTCACCCAGCCACCGAAAAACAAAACCGTCTTGACCTCCACCATCCAAGGCAACTTCATTTACCCATTTGGCCACATGAAAGAATTGATGAAGTTGGAGGGTATCAGTCCGGAGCTTCGCTTCTCGGCTAAAGTCAGGTAAAACCATTTGACTATATGTTTGTTTGTTTTTTTTTTTTTAATTCAAAATTTGTATTCTTTTTAGTTCTACAACTTAAAATCAAATTTTTAAAAATCTTAAATTTAGTATCTCAAACCTAATTTCTACCGAATTTGATTAAATACCAATAATAGTTTCCACTCATGAAAGTGTGAATTTGTACACTTTCAAAATTTATAATAAAAATGTTAATATATAACAAAAAGATAAAATTTAAATCAACAATAAACTAAGTGACACAAGAGAGTTCAAATGAACAACTTTACTTTCCCTCAAATTTGAAGTAATACCTTGTTTCTATTTTTAAGTACTAACAAGATGACCATTATTTTTTTGCTTTATTTTTAGATTTTGATAATTAAGCTTGTGTATATTACTTTTACAATATACATCAATTTTGTTATTTATAAATGTTTTCATATGCTATTTAAGTTATTTTTTAGTTTTTTAACATATAGTTTTGGTGTAAATTAAACATTTTTTTTGGTGTTCTTATCAGTTACATTATGGAGAGATGGACATCGAGAGATCGGTTGGTGGAGGTTTATTGTGATAGCCTTAGGCTTAAGTTCAATGATTCTACAGTTTTTGATAATAAAAAATGTAAAGTTGATCTATGAGATTTTCATCTTGTTGTGTTCTTCTTGCTCAATAATGATCCCAAAGATTTGTAACTCAAAGTTTTAATTGTGTTATTTTTATGAATAGAGAGAGTTGATCTTGTAATTATTTATTTTCAGTTTTTTGAATTTTCATGATTTGTGTTTGAATAATAATGTAGAAAAATGGTATAGAAGATTAAAAGATCAGGTTAAGGGAAGTAGAGTTTGGTTTTGGAAGAGTTGACTAAGATTATATAATTTAATTTGTTGATGTGTGTGAAGAAAAAGAAAAAAGTGTAATGGTGACCTAGAAAAAAGAAACATCTAAAACTTATTAATTACAGG

mRNA sequence

CTCATCAATATAATATATCATCCGTTCACTTAAACATCAAAAAGAAAATATATCAAAACCACCGAAAAGTGAAAAAGTGCTGAAAAGAAAAAAACAGATGAGGAGCAATGGTAAAGCAGGAGAACCACCACCACCACCATCATCATCATCATCAAAAGAAATGTCCTATGTAATAAAACATGGGACCGCAAAAAGAACAAGGGTGTTGAGAATCACAGGAAGAACCTTATTGGGTTTAATGATTCTTGTGGCTATCGCAATGATTATATGTTGGCTTATTGTGTTTCCCAGAAACCCAGATATCATTGTGGAAACTGGCCAAGTTATACCCCATAGTTTAACTGATAGAAAGTTGAATGCGACCATAGCTTTTACTGTTACAAGCTATAACCCTAACAAAAAAGCCTCCATTCGTATGGATTCCATGAGGATGATAGTTAGTGATATGGGGTTGTCGTTTTGGTCCGACATCCCCAGCTTCACCCAGCCACCGAAAAACAAAACCGTCTTGACCTCCACCATCCAAGGCAACTTCATTTACCCATTTGGCCACATGAAAGAATTGATGAAGTTGGAGGGTATCAGTCCGGAGCTTCGCTTCTCGGCTAAAGTCAGTTACATTATGGAGAGATGGACATCGAGAGATCGGTTGGTGGAGGTTTATTGTGATAGCCTTAGGCTTAAGTTCAATGATTCTACAGTTTTTGATAATAAAAAATGTAAAGTTGATCTATGAGATTTTCATCTTGTTGTGTTCTTCTTGCTCAATAATGATCCCAAAGATTTGTAACTCAAAGTTTTAATTGTGTTATTTTTATGAATAGAGAGAGTTGATCTTGTAATTATTTATTTTCAGTTTTTTGAATTTTCATGATTTGTGTTTGAATAATAATGTAGAAAAATGGTATAGAAGATTAAAAGATCAGGTTAAGGGAAGTAGAGTTTGGTTTTGGAAGAGTTGACTAAGATTATATAATTTAATTTGTTGATGTGTGTGAAGAAAAAGAAAAAAGTGTAATGGTGACCTAGAAAAAAGAAACATCTAAAACTTATTAATTACAGG

Coding sequence (CDS)

ATGAGGAGCAATGGTAAAGCAGGAGAACCACCACCACCACCATCATCATCATCATCAAAAGAAATGTCCTATGTAATAAAACATGGGACCGCAAAAAGAACAAGGGTGTTGAGAATCACAGGAAGAACCTTATTGGGTTTAATGATTCTTGTGGCTATCGCAATGATTATATGTTGGCTTATTGTGTTTCCCAGAAACCCAGATATCATTGTGGAAACTGGCCAAGTTATACCCCATAGTTTAACTGATAGAAAGTTGAATGCGACCATAGCTTTTACTGTTACAAGCTATAACCCTAACAAAAAAGCCTCCATTCGTATGGATTCCATGAGGATGATAGTTAGTGATATGGGGTTGTCGTTTTGGTCCGACATCCCCAGCTTCACCCAGCCACCGAAAAACAAAACCGTCTTGACCTCCACCATCCAAGGCAACTTCATTTACCCATTTGGCCACATGAAAGAATTGATGAAGTTGGAGGGTATCAGTCCGGAGCTTCGCTTCTCGGCTAAAGTCAGTTACATTATGGAGAGATGGACATCGAGAGATCGGTTGGTGGAGGTTTATTGTGATAGCCTTAGGCTTAAGTTCAATGATTCTACAGTTTTTGATAATAAAAAATGTAAAGTTGATCTATGA

Protein sequence

MRSNGKAGEPPPPPSSSSSKEMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKNKTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFNDSTVFDNKKCKVDL

Homology

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BLAST of CsGy1G014030 vs. NCBI nr
Match: XP_004139454.1 (PREDICTED: uncharacterized protein LOC101218532 [Cucumis sativus] >KGN64868.1 hypothetical protein Csa_1G134270 [Cucumis sativus])

HSP 1 Score: 395.2 bits (1014), Expect = 1.4e-106
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MRSNGKAGEXXXXXXXXXXXXMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWL 60
           MRSNGKAGEXXXXXXXXXXXXMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWL
Sbjct: 1   MRSNGKAGEXXXXXXXXXXXXMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWL 60

Query: 61  IVFPRNPDIIVETGQVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLS 120
           IVFPRNPDIIVETGQVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLS
Sbjct: 61  IVFPRNPDIIVETGQVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLS 120

Query: 121 FWSDIPSFTQPPKNKTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWT 180
           FWSDIPSFTQPPKNKTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWT
Sbjct: 121 FWSDIPSFTQPPKNKTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWT 180

Query: 181 SRDRLVEVYCDSLRLKFNDSTVFDNKKCKVDL 213
           SRDRLVEVYCDSLRLKFNDSTVFDNKKCKVDL
Sbjct: 181 SRDRLVEVYCDSLRLKFNDSTVFDNKKCKVDL 212

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BLAST of CsGy1G014030 vs. NCBI nr
Match: XP_008462326.1 (PREDICTED: uncharacterized protein LOC103500702 [Cucumis melo])

HSP 1 Score: 363.6 bits (932), Expect = 4.5e-97
Identity = 180/191 (94.24%), Postives = 187/191 (97.91%), Query Frame = 0


Query: 22  MSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSL 81
           +SYV KHG AKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPD+IVETG+VIPHSL
Sbjct: 18  ISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDLIVETGKVIPHSL 77

Query: 82  TDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKNKTVLTST 141
           TDRKLNATIAFTVTSYNPNKKASIRMDSMRMIV+DMGLSFWSDIPSFTQPPKNKTVL ST
Sbjct: 78  TDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWSDIPSFTQPPKNKTVLNST 137

Query: 142 IQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFNDST 201
           IQGNFIYPFGHMKEL+KLEGISP+LRFSAKVSYIMERWTSR RL+EVYCDSLRLKFNDST
Sbjct: 138 IQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRGRLLEVYCDSLRLKFNDST 197

Query: 202 VFDNKKCKVDL 213
           VFDNKKCKVDL
Sbjct: 198 VFDNKKCKVDL 208

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BLAST of CsGy1G014030 vs. NCBI nr
Match: XP_023520091.1 (uncharacterized protein At1g08160-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258.1 bits (658), Expect = 2.7e-65
Identity = 119/190 (62.63%), Postives = 155/190 (81.58%), Query Frame = 0


Query: 23  SYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSLT 82
           SY  +HGTAKRT+++RI GR+LL +M LV +A++ICWL+VFP+ P++I+E G V PHSLT
Sbjct: 24  SYGHQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVFPKTPNLILENGHVTPHSLT 83

Query: 83  DRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKNKTVLTSTI 142
           DRKLNA+I+FT+ SYNPNK+ASI MDSM+M + DMG +F + IP+FTQPP N+T L  T+
Sbjct: 84  DRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFTTTIPTFTQPPGNQTFLNPTV 143

Query: 143 QGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFNDSTV 202
           + NFIYPFG MK+LM  +G++PEL FSA VSYI+E+W S+ R +E+YCD +RLK N ST 
Sbjct: 144 EVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKWASKRRSLEIYCDRVRLKINGSTP 203

Query: 203 FDNKKCKVDL 213
           FDN KCKVDL
Sbjct: 204 FDNTKCKVDL 213

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BLAST of CsGy1G014030 vs. NCBI nr
Match: XP_022964992.1 (uncharacterized protein At1g08160-like [Cucurbita moschata])

HSP 1 Score: 257.7 bits (657), Expect = 3.5e-65
Identity = 119/190 (62.63%), Postives = 155/190 (81.58%), Query Frame = 0


Query: 23  SYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSLT 82
           SY  +HGTAKRT+++RI GR+LL +M LV +A++ICWL+VFP+ P++I+E G V PHSLT
Sbjct: 24  SYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVFPKTPNLILENGHVTPHSLT 83

Query: 83  DRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKNKTVLTSTI 142
           DRKLNA+I+FT+ SYNPNK+ASI MDSM+M + DMG +F + IP+FTQPP N+T L  T+
Sbjct: 84  DRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFITTIPTFTQPPGNQTFLNPTV 143

Query: 143 QGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFNDSTV 202
           + NFIYPFG MK+LM  +G++PEL FSA VSYI+E+W S+ R +E+YCD +RLK N ST 
Sbjct: 144 EVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKWASKRRSLEIYCDRVRLKINGSTP 203

Query: 203 FDNKKCKVDL 213
           FDN KCKVDL
Sbjct: 204 FDNTKCKVDL 213

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BLAST of CsGy1G014030 vs. NCBI nr
Match: XP_022970341.1 (uncharacterized protein At1g08160-like [Cucurbita maxima])

HSP 1 Score: 254.6 bits (649), Expect = 3.0e-64
Identity = 118/189 (62.43%), Postives = 153/189 (80.95%), Query Frame = 0


Query: 24  YVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSLTD 83
           Y  +HGTAKRT+++RI GR+LL +M LV +A++ICWL+VFP+ P++I+E G V PHSLTD
Sbjct: 25  YAQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVFPKTPNLILENGHVTPHSLTD 84

Query: 84  RKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKNKTVLTSTIQ 143
           RKLNA+I+FT+ SYNPNK+ASI MDSM+M + DMG +F + IP+FTQ P N+T LT T++
Sbjct: 85  RKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFITTIPTFTQLPGNQTFLTPTVE 144

Query: 144 GNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFNDSTVF 203
            NFIYPFG MK+LM   G++PEL FSA VSYI+E+W S+ R +E+YCD +RLK N ST F
Sbjct: 145 VNFIYPFGQMKDLMLSNGLNPELHFSAHVSYIVEKWASKRRSLEIYCDRVRLKINGSTPF 204

Query: 204 DNKKCKVDL 213
           DN KCKVDL
Sbjct: 205 DNTKCKVDL 213

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BLAST of CsGy1G014030 vs. TAIR10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-09
Identity = 48/176 (27.27%), Postives = 79/176 (44.89%), Query Frame = 0


Query: 44  LLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSLT-DRKLNATIAFTVTSYNPNKK 103
           +L L+ + A+  +I WL   P+     VE   V   +LT D  ++AT  FT+ S+NPN +
Sbjct: 33  ILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATFQFTIQSHNPNHR 92

Query: 104 ASIRMDSMRMIV--SDMGLSFWSDIPSFTQPPKN-KTVLTSTIQGNFIYPFGHMKELM-- 163
            S+   S+ + V   D  L+F   +  F QP  N K +  + I  N      + K+L   
Sbjct: 93  ISVYYSSVEIFVKFKDQTLAF-DTVEPFHQPRMNVKQIDETLIAENVAVSKSNGKDLRSQ 152

Query: 164 -KLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFNDSTVFDNKKCKVDL 213
             L  I  E+   A+V + +  W S  R  ++ C  + +  +      N  C  D+
Sbjct: 153 NSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSLSQPNKSQNSSCDADI 207

[Close]

BLAST of CsGy1G014030 vs. TAIR10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 59.3 bits (142), Expect = 3.3e-09
Identity = 52/181 (28.73%), Postives = 84/181 (46.41%), Query Frame = 0


Query: 28  HGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQV--IPHSLTDRK 87
           HG      +L +  + ++ L++++ +A +I WLIV PR     V    +    H+  D  
Sbjct: 29  HGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNI 88

Query: 88  LNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWS-DIPSFTQPPKNKTVLTSTIQG 147
           L   +A TV   NPNK+  +  D +       G  F +  +  F Q  KN TVLT T QG
Sbjct: 89  LRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQG 148

Query: 148 N--FIYPFGHMKEL--MKLEGI-SPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFND 201
               I+  G  + L   ++ G+ + E++F  +V + +     R    +V CD LRL  + 
Sbjct: 149 QNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLST 208

[Close]

BLAST of CsGy1G014030 vs. TAIR10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 53.9 bits (128), Expect = 1.4e-07
Identity = 47/166 (28.31%), Postives = 78/166 (46.99%), Query Frame = 0


Query: 56  IICWLIVFPRNPDIIVETGQVIPHSL--TDRKLNATIAFTVTSYNPNKKASIRMDSMRMI 115
           +I +L + P+     VE   V   ++   D  +NA  ++ + SYNP K  S+R  SMR+ 
Sbjct: 56  LITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRIS 115

Query: 116 VSDMGLSF-WSDIPSFTQPPKNKT-VLTSTIQGNFIYPFGHMKELM--KLEG-ISPELRF 175
            +    S    +I  F Q PKN+T + T  +  N      + ++L   K +G I  E+  
Sbjct: 116 TAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAEKSKGTIEMEVYI 175

Query: 176 SAKVSYIMERWTSRDRLVEVYCDSLRLKFNDSTV--FDNKKCKVDL 213
           +A+VSY    + SR R ++  C  + +    S++  F    CK  L
Sbjct: 176 TARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTRL 221

[Close]

BLAST of CsGy1G014030 vs. TAIR10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 45.1 bits (105), Expect = 6.4e-05
Identity = 44/186 (23.66%), Postives = 76/186 (40.86%), Query Frame = 0


Query: 34  TRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSLTDRKLNATIAFT 93
           TR+ +      L ++  V +   I WL + P  P   ++   V          NA IAF 
Sbjct: 40  TRISKFICAMFLLVLFFVGVIAFILWLSLRPHRPRFHIQDFVVQGLDQPTGVENARIAFN 99

Query: 94  VTSYNPNKKASIRMDSMR--MIVSDMGLSFWSDIPSFTQPPKNKTVLTSTIQG-NFIYPF 153
           VT  NPN+   +  DSM   +   D  +     +  F Q P N T++T T+ G +     
Sbjct: 100 VTILNPNQHMGVYFDSMEGSIYYKDQRVGLIPLLNPFFQQPTNTTIVTGTLTGASLTVNS 159

Query: 154 GHMKELM--KLEG-ISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFNDSTV---FD 211
               E    + +G +   L   + + + + RW S+   +   C+   +   D  +   F+
Sbjct: 160 NRWTEFSNDRAQGTVGFRLDIVSTIRFKLHRWISKHHRMHANCNI--VVGRDGLILPKFN 219

[Close]

BLAST of CsGy1G014030 vs. TAIR10
Match: AT4G09590.1 (NDR1/HIN1-like 22)

HSP 1 Score: 43.5 bits (101), Expect = 1.9e-04
Identity = 27/105 (25.71%), Postives = 52/105 (49.52%), Query Frame = 0


Query: 44  LLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSLTD-RKLNATIAFTVTSYNPNKK 103
           ++G +I+V + + + W+I+ P+NP+ I++   V   +L+    L +    T+ S N N  
Sbjct: 26  IIGFIIIVLMTIFLVWIILQPKNPEFILQDTTVYAFNLSQPNLLTSKFQITIASRNRNSN 85

Query: 104 ASIRMDSMRMIVS--DMGLSFWSDIPSFTQPPKNKTVLTSTIQGN 146
             I  D +    S  +  ++  SD+P   Q  K  +V +  + GN
Sbjct: 86  IGIYYDHLHAYASYRNQQITLASDLPPTYQRHKEDSVWSPLLYGN 130

[Close]

BLAST of CsGy1G014030 vs. Swiss-Prot
Match: sp|Q9SJ52|NHL10_ARATH (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.0e-08
Identity = 52/181 (28.73%), Postives = 84/181 (46.41%), Query Frame = 0


Query: 28  HGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQV--IPHSLTDRK 87
           HG      +L +  + ++ L++++ +A +I WLIV PR     V    +    H+  D  
Sbjct: 29  HGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNI 88

Query: 88  LNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWS-DIPSFTQPPKNKTVLTSTIQG 147
           L   +A TV   NPNK+  +  D +       G  F +  +  F Q  KN TVLT T QG
Sbjct: 89  LRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQG 148

Query: 148 N--FIYPFGHMKEL--MKLEGI-SPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFND 201
               I+  G  + L   ++ G+ + E++F  +V + +     R    +V CD LRL  + 
Sbjct: 149 QNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLST 208

[Close]

BLAST of CsGy1G014030 vs. Swiss-Prot
Match: sp|Q8VZ13|Y1816_ARATH (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.5e-06
Identity = 47/166 (28.31%), Postives = 78/166 (46.99%), Query Frame = 0


Query: 56  IICWLIVFPRNPDIIVETGQVIPHSL--TDRKLNATIAFTVTSYNPNKKASIRMDSMRMI 115
           +I +L + P+     VE   V   ++   D  +NA  ++ + SYNP K  S+R  SMR+ 
Sbjct: 56  LITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRIS 115

Query: 116 VSDMGLSF-WSDIPSFTQPPKNKT-VLTSTIQGNFIYPFGHMKELM--KLEG-ISPELRF 175
            +    S    +I  F Q PKN+T + T  +  N      + ++L   K +G I  E+  
Sbjct: 116 TAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAEKSKGTIEMEVYI 175

Query: 176 SAKVSYIMERWTSRDRLVEVYCDSLRLKFNDSTV--FDNKKCKVDL 213
           +A+VSY    + SR R ++  C  + +    S++  F    CK  L
Sbjct: 176 TARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTRL 221

[Close]

BLAST of CsGy1G014030 vs. TrEMBL
Match: tr|A0A0A0LSV0|A0A0A0LSV0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G134270 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 9.3e-107
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MRSNGKAGEXXXXXXXXXXXXMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWL 60
           MRSNGKAGEXXXXXXXXXXXXMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWL
Sbjct: 1   MRSNGKAGEXXXXXXXXXXXXMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWL 60

Query: 61  IVFPRNPDIIVETGQVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLS 120
           IVFPRNPDIIVETGQVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLS
Sbjct: 61  IVFPRNPDIIVETGQVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLS 120

Query: 121 FWSDIPSFTQPPKNKTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWT 180
           FWSDIPSFTQPPKNKTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWT
Sbjct: 121 FWSDIPSFTQPPKNKTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWT 180

Query: 181 SRDRLVEVYCDSLRLKFNDSTVFDNKKCKVDL 213
           SRDRLVEVYCDSLRLKFNDSTVFDNKKCKVDL
Sbjct: 181 SRDRLVEVYCDSLRLKFNDSTVFDNKKCKVDL 212

[Close]

BLAST of CsGy1G014030 vs. TrEMBL
Match: tr|A0A1S3CGQ5|A0A1S3CGQ5_CUCME (uncharacterized protein LOC103500702 OS=Cucumis melo OX=3656 GN=LOC103500702 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 3.0e-97
Identity = 180/191 (94.24%), Postives = 187/191 (97.91%), Query Frame = 0


Query: 22  MSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSL 81
           +SYV KHG AKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPD+IVETG+VIPHSL
Sbjct: 18  ISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDLIVETGKVIPHSL 77

Query: 82  TDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKNKTVLTST 141
           TDRKLNATIAFTVTSYNPNKKASIRMDSMRMIV+DMGLSFWSDIPSFTQPPKNKTVL ST
Sbjct: 78  TDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWSDIPSFTQPPKNKTVLNST 137

Query: 142 IQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFNDST 201
           IQGNFIYPFGHMKEL+KLEGISP+LRFSAKVSYIMERWTSR RL+EVYCDSLRLKFNDST
Sbjct: 138 IQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRGRLLEVYCDSLRLKFNDST 197

Query: 202 VFDNKKCKVDL 213
           VFDNKKCKVDL
Sbjct: 198 VFDNKKCKVDL 208

[Close]

BLAST of CsGy1G014030 vs. TrEMBL
Match: tr|A0A1S3CGS4|A0A1S3CGS4_CUCME (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103500718 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.4e-57
Identity = 115/185 (62.16%), Postives = 144/185 (77.84%), Query Frame = 0


Query: 28  HGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSLTDRKLN 87
           HG  KRTR++R+ GR+LLG++ LVA+ MIICWL+V P+ P +IVETG+V+ HS T   LN
Sbjct: 10  HGITKRTRLIRLVGRSLLGVIFLVALGMIICWLVVIPKTPRLIVETGKVVVHSSTISMLN 69

Query: 88  ATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKNKTVLTSTIQGNFI 147
           ATIAFTV SYNPNK+ASI MD MRMIV +MG+ F S IPSFT  P+N+TVL S +Q NF 
Sbjct: 70  ATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLWSAVQVNFE 129

Query: 148 YPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFNDSTVFDNKK 207
           YPFG+ +E      I+PEL+FSA+VSY +E+W S+ RL+E+YC+ L LK NDST FDN K
Sbjct: 130 YPFGYTEE------INPELQFSAEVSYSVEKWMSKPRLLEIYCNHLLLKINDSTTFDNTK 188

Query: 208 CKVDL 213
           CKVDL
Sbjct: 190 CKVDL 188

[Close]

BLAST of CsGy1G014030 vs. TrEMBL
Match: tr|A0A0A0LY09|A0A0A0LY09_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132760 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 3.9e-57
Identity = 113/184 (61.41%), Postives = 145/184 (78.80%), Query Frame = 0


Query: 28  HGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSLTDRKLN 87
           HG  KRTR++R+ GR+LLG++ LVA+ MIICWL+V P++P +IVETG+VI HS T   LN
Sbjct: 10  HGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIAHSSTISMLN 69

Query: 88  ATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKNKTVLTSTIQGNFI 147
           ATIAFTV SYNPNK+ASI MD MRMIV +MG+ F S IPSFT  P+N+TVL+S +Q NF 
Sbjct: 70  ATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLSSAVQVNFE 129

Query: 148 YPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFNDSTVFDNKK 207
           YPFG+ +E      I+PEL+FSA+VSY +++W S+ RL+E+YC+ + LK NDST FDN K
Sbjct: 130 YPFGYTEE------INPELQFSAEVSYSIKKWMSKPRLLEIYCNHILLKINDSTAFDNTK 187

Query: 208 CKVD 212
           CKVD
Sbjct: 190 CKVD 187

[Close]

BLAST of CsGy1G014030 vs. TrEMBL
Match: tr|A0A0A0LVK9|A0A0A0LVK9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132770 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.9e-52
Identity = 103/183 (56.28%), Postives = 137/183 (74.86%), Query Frame = 0


Query: 30  TAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSLTDRKLNAT 89
           T K+TR++RI GR+LL ++ LV +AM+ICWL+VFP+NP I VETG+VI H+ T   LNAT
Sbjct: 24  TTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIAHNSTHNMLNAT 83

Query: 90  IAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKNKTVLTSTIQGNFIYP 149
           I FTV  YNPNK+AS+ + SMRMIV+ MG +F S IP+F Q P N+TVL+  ++ NF YP
Sbjct: 84  IVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIPTFMQTPGNQTVLSPAVEVNFDYP 143

Query: 150 FGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFNDSTVFDNKKCK 209
           FGH +E      I+PEL FSA++SY +E WTSR RL+ +YC++L L+ ND+  F+N KC 
Sbjct: 144 FGHQEE------INPELHFSAEISYSVEHWTSRPRLLLIYCNNLLLRINDTRTFENTKCN 200

Query: 210 VDL 213
           VDL
Sbjct: 204 VDL 200

The following BLAST results are available for this feature:

BLAST of CsGy1G014030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139454.1	1.4e-106	100.00	PREDICTED: uncharacterized protein LOC101218532 [Cucumis sativus] >KGN64868.1 hy...	[more]
XP_008462326.1	4.5e-97	94.24	PREDICTED: uncharacterized protein LOC103500702 [Cucumis melo]	[more]
XP_023520091.1	2.7e-65	62.63	uncharacterized protein At1g08160-like [Cucurbita pepo subsp. pepo]	[more]
XP_022964992.1	3.5e-65	62.63	uncharacterized protein At1g08160-like [Cucurbita moschata]	[more]
XP_022970341.1	3.0e-64	62.43	uncharacterized protein At1g08160-like [Cucurbita maxima]	[more]

BLAST of CsGy1G014030 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22870.1	1.5e-09	27.27	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35980.1	3.3e-09	28.73	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G08160.1	1.4e-07	28.31	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G05220.1	6.4e-05	23.66	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G09590.1	1.9e-04	25.71	NDR1/HIN1-like 22	[more]

BLAST of CsGy1G014030 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SJ52\|NHL10_ARATH	6.0e-08	28.73	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
sp\|Q8VZ13\|Y1816_ARATH	2.5e-06	28.31	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P...	[more]

BLAST of CsGy1G014030 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LSV0\|A0A0A0LSV0_CUCSA	9.3e-107	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G134270 PE=4 SV=1	[more]
tr\|A0A1S3CGQ5\|A0A1S3CGQ5_CUCME	3.0e-97	94.24	uncharacterized protein LOC103500702 OS=Cucumis melo OX=3656 GN=LOC103500702 PE=...	[more]
tr\|A0A1S3CGS4\|A0A1S3CGS4_CUCME	1.4e-57	62.16	protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103500718 PE=4 SV=1	[more]
tr\|A0A0A0LY09\|A0A0A0LY09_CUCSA	3.9e-57	61.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132760 PE=4 SV=1	[more]
tr\|A0A0A0LVK9\|A0A0A0LVK9_CUCSA	2.9e-52	56.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132770 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G014030.1	CsGy1G014030.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 93..174 e-value: 2.7E-5 score: 24.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR31852:SF5	GB\|AAF18257.1	coord: 31..212
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 31..212

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G014030	Cucurbita maxima (Rimu)	cgybcmaB058
CsGy1G014030	Cucurbita maxima (Rimu)	cgybcmaB061
CsGy1G014030	Cucurbita maxima (Rimu)	cgybcmaB123
CsGy1G014030	Cucurbita moschata (Rifu)	cgybcmoB054
CsGy1G014030	Cucurbita moschata (Rifu)	cgybcmoB057
CsGy1G014030	Cucurbita moschata (Rifu)	cgybcmoB113
CsGy1G014030	Cucurbita pepo (Zucchini)	cgybcpeB082
CsGy1G014030	Cucurbita pepo (Zucchini)	cgybcpeB142
CsGy1G014030	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G014030	Bottle gourd (USVL1VR-Ls)	cgyblsiB041
CsGy1G014030	Melon (DHL92) v3.5.1	cgybmeB010
CsGy1G014030	Melon (DHL92) v3.6.1	cgybmedB009
CsGy1G014030	Watermelon (Charleston Gray)	cgybwcgB014
CsGy1G014030	Watermelon (Charleston Gray)	cgybwcgB027
CsGy1G014030	Watermelon (97103) v1	cgybwmB047
CsGy1G014030	Watermelon (97103) v1	cgybwmB067
CsGy1G014030	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G014030	Silver-seed gourd	carcgybB0180
CsGy1G014030	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G014030	Watermelon (97103) v2	cgybwmbB003
CsGy1G014030	Watermelon (97103) v2	cgybwmbB026
CsGy1G014030	Wax gourd	cgybwgoB046