CsGy1G014020 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G014020
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	NDR1/HIN1-like protein 12
Location	Chr1 : 9634398 .. 9635454 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAGCAGTACTACAGCAAAGGGAGAAGCATCATCGTCAAAAAAAAGCTCCAAAGGGCAAAATGAGACAACAAAAAAGACGAGAATTATAAGAATCATAGGAAGAAGTTTGTTGAGTGTAATATTTCTTGTTGGTCTTGCAATGGTCATATGTTGGCTTGTTGTGTTCCCCAAAAATCCTCGTATCTTTGTGGAAACTGGCAGAGTCATAGCCCACAATTCAACTCATAATATGCTCAATGCCACCATAGTTTTCACCGTTAAATGCTACAACCCCAACAAAAGAGCCTCGGTTCATTTGCACTCTATGAGGATGATAGTTACTAGCATGGGCCAAGCATTTTCGTCCGTTATCCCGACATTCATGCAGACTCCTGGAAACCAAACCGTCTTGTCGCCTGCTGTTGAGGTCAACTTCGACTATCCATTCGGGCACCAAGAAGAGATAAATCCAGAGCTTCACTTCTCTGCTGAAATCAGGTATACATATCTTAGGTGCATCTTAATATACACCTATCTTTGTGCATTCCAATCACATCACAAACTTCATAATAATATAATAAAATATTTAATACGGAAAGGATAATTTGACGCATAAAAAATTAATAGTATATAGAAATATAGGTGCGAATAGATGTGTGATAATTATTATATATATATATATATATATAGGTTTTATTGAGGTCAATTTTTTTTTATATATTTAAAATTAAATGTTTGTGGCGTGTGGGTACTTCATGGAATAAAATCATTACTTTACCTCCTTTTTCACCTAAATCACTAGTGATAACTAGTTCTTGTGGTTAGATTTTGAAAAGTAACTAGGCTTACTTCTACAAATAAATATTTTTCTTTTGTCATCAACCTTTGTTTCTACTTTTAAAATGTAATTTTGTTTCGATCTAATTTGTACTTTCGACTCTGTTGTTATCAGCTATAGTGTCGAGCACTGGACATCGAGACCTCGGTTGCTCCTAATCTATTGTAATAATCTCCTGCTAAGAATCAATGATACTAGAACTTTTGAGAATACCAAATGCAATGTGGATCTTTGA

mRNA sequence

ATGAGGAGCAGTACTACAGCAAAGGGAGAAGCATCATCGTCAAAAAAAAGCTCCAAAGGGCAAAATGAGACAACAAAAAAGACGAGAATTATAAGAATCATAGGAAGAAGTTTGTTGAGTGTAATATTTCTTGTTGGTCTTGCAATGGTCATATGTTGGCTTGTTGTGTTCCCCAAAAATCCTCGTATCTTTGTGGAAACTGGCAGAGTCATAGCCCACAATTCAACTCATAATATGCTCAATGCCACCATAGTTTTCACCGTTAAATGCTACAACCCCAACAAAAGAGCCTCGGTTCATTTGCACTCTATGAGGATGATAGTTACTAGCATGGGCCAAGCATTTTCGTCCGTTATCCCGACATTCATGCAGACTCCTGGAAACCAAACCGTCTTGTCGCCTGCTGTTGAGTGTCGAGCACTGGACATCGAGACCTCGGTTGCTCCTAATCTATTAATCAATGATACTAGAACTTTTGAGAATACCAAATGCAATGTGGATCTTTGA

Coding sequence (CDS)

ATGAGGAGCAGTACTACAGCAAAGGGAGAAGCATCATCGTCAAAAAAAAGCTCCAAAGGGCAAAATGAGACAACAAAAAAGACGAGAATTATAAGAATCATAGGAAGAAGTTTGTTGAGTGTAATATTTCTTGTTGGTCTTGCAATGGTCATATGTTGGCTTGTTGTGTTCCCCAAAAATCCTCGTATCTTTGTGGAAACTGGCAGAGTCATAGCCCACAATTCAACTCATAATATGCTCAATGCCACCATAGTTTTCACCGTTAAATGCTACAACCCCAACAAAAGAGCCTCGGTTCATTTGCACTCTATGAGGATGATAGTTACTAGCATGGGCCAAGCATTTTCGTCCGTTATCCCGACATTCATGCAGACTCCTGGAAACCAAACCGTCTTGTCGCCTGCTGTTGAGTGTCGAGCACTGGACATCGAGACCTCGGTTGCTCCTAATCTATTAATCAATGATACTAGAACTTTTGAGAATACCAAATGCAATGTGGATCTTTGA

Protein sequence

MRSSTTAKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIPTFMQTPGNQTVLSPAVECRALDIETSVAPNLLINDTRTFENTKCNVDL

Homology

[Close]

BLAST of CsGy1G014020 vs. NCBI nr
Match: XP_011648454.1 (PREDICTED: uncharacterized protein LOC105434469 [Cucumis sativus] >KGN64867.1 hypothetical protein Csa_1G132770 [Cucumis sativus])

HSP 1 Score: 276.2 bits (705), Expect = 7.5e-71
Identity = 159/200 (79.50%), Postives = 161/200 (80.50%), Query Frame = 0


Query: 1   MRSSTTAKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN 60
           MRSSTTAKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN
Sbjct: 1   MRSSTTAKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN 60

Query: 61  PRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIP 120
           PRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIP
Sbjct: 61  PRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIP 120

Query: 121 TFMQTPGNQTVLSPAVECR-----------------ALDIETSV-----APNLL------ 169
           TFMQTPGNQTVLSPAVE                   + +I  SV      P LL      
Sbjct: 121 TFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNN 180

[Close]

BLAST of CsGy1G014020 vs. NCBI nr
Match: XP_008462337.1 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo])

HSP 1 Score: 255.8 bits (652), Expect = 1.1e-64
Identity = 145/200 (72.50%), Postives = 153/200 (76.50%), Query Frame = 0


Query: 1   MRSSTTAKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN 60
           MRS TT KGEASSS+KSSKGQNETTKKTRIIRIIGR LLSVIFLVGLAMVICWLVVFPKN
Sbjct: 1   MRSITTTKGEASSSRKSSKGQNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKN 60

Query: 61  PRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIP 120
           PR  VETG+VIAHNSTHNMLNATI FTVKCYNPNKRAS+HLHSMRMI+TSMGQAFSS +P
Sbjct: 61  PRFVVETGKVIAHNSTHNMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMP 120

Query: 121 TFMQTPGNQTVLSPAVECR-----------------ALDIETSVA-----PNLL------ 169
            FMQTPGNQTVLSPAV+                   + +I  SV      P LL      
Sbjct: 121 MFMQTPGNQTVLSPAVDVNFDYPFGHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNN 180

[Close]

BLAST of CsGy1G014020 vs. NCBI nr
Match: XP_011654134.1 (PREDICTED: protein YLS9-like isoform X2 [Cucumis sativus] >KGN64866.1 hypothetical protein Csa_1G132760 [Cucumis sativus])

HSP 1 Score: 165.6 bits (418), Expect = 1.4e-37
Identity = 94/175 (53.71%), Postives = 115/175 (65.71%), Query Frame = 0


Query: 25  TKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIAHNSTHNMLNATI 84
           TK+TR+IR++GRSLL VIFLV L M+ICWLVV PK+PR+ VETG+VIAH+ST +MLNATI
Sbjct: 13  TKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIAHSSTISMLNATI 72

Query: 85  VFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIPTFMQTPGNQTVLSPAVECR----- 144
            FTVK YNPNKRAS+H+  MRMIV +MG  FSS IP+F  TP NQTVLS AV+       
Sbjct: 73  AFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLSSAVQVNFEYPF 132

Query: 145 ------------ALDIETSV-----APNLL----------INDTRTFENTKCNVD 168
                       + ++  S+      P LL          IND+  F+NTKC VD
Sbjct: 133 GYTEEINPELQFSAEVSYSIKKWMSKPRLLEIYCNHILLKINDSTAFDNTKCKVD 187

[Close]

BLAST of CsGy1G014020 vs. NCBI nr
Match: XP_008462348.1 (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 164.5 bits (415), Expect = 3.2e-37
Identity = 94/176 (53.41%), Postives = 114/176 (64.77%), Query Frame = 0


Query: 25  TKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIAHNSTHNMLNATI 84
           TK+TR+IR++GRSLL VIFLV L M+ICWLVV PK PR+ VETG+V+ H+ST +MLNATI
Sbjct: 13  TKRTRLIRLVGRSLLGVIFLVALGMIICWLVVIPKTPRLIVETGKVVVHSSTISMLNATI 72

Query: 85  VFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIPTFMQTPGNQTVLSPAVECR----- 144
            FTVK YNPNKRAS+H+  MRMIV +MG  FSS IP+F  TP NQTVL  AV+       
Sbjct: 73  AFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLWSAVQVNFEYPF 132

Query: 145 ------------ALDIETSV-----APNLL----------INDTRTFENTKCNVDL 169
                       + ++  SV      P LL          IND+ TF+NTKC VDL
Sbjct: 133 GYTEEINPELQFSAEVSYSVEKWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL 188

[Close]

BLAST of CsGy1G014020 vs. NCBI nr
Match: XP_011654126.1 (PREDICTED: protein YLS9-like isoform X1 [Cucumis sativus])

HSP 1 Score: 159.5 bits (402), Expect = 1.0e-35
Identity = 80/113 (70.80%), Postives = 95/113 (84.07%), Query Frame = 0


Query: 25  TKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIAHNSTHNMLNATI 84
           TK+TR+IR++GRSLL VIFLV L M+ICWLVV PK+PR+ VETG+VIAH+ST +MLNATI
Sbjct: 13  TKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIAHSSTISMLNATI 72

Query: 85  VFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIPTFMQTPGNQTVLSPAVE 138
            FTVK YNPNKRAS+H+  MRMIV +MG  FSS IP+F  TP NQTVLS AV+
Sbjct: 73  AFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLSSAVQ 125

[Close]

BLAST of CsGy1G014020 vs. TAIR10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 50.1 bits (118), Expect = 1.6e-06
Identity = 42/132 (31.82%), Postives = 68/132 (51.52%), Query Frame = 0


Query: 26  KKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIAHNSTH-NMLNATI 85
           ++  +I  I   +L++IF+  +  +I WL   PK  R  VE   V   N T+ N ++AT 
Sbjct: 21  RRPSLICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATF 80

Query: 86  VFTVKCYNPNKRASVHLHSMRMIVTSMGQ--AFSSVIPTFMQTPGNQTVLSPAVECRALD 145
            FT++ +NPN R SV+  S+ + V    Q  AF +V P F Q         P +  + +D
Sbjct: 81  QFTIQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEP-FHQ---------PRMNVKQID 140

Query: 146 IETSVAPNLLIN 155
            ET +A N+ ++
Sbjct: 141 -ETLIAENVAVS 141

[Close]

BLAST of CsGy1G014020 vs. TAIR10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 48.9 bits (115), Expect = 3.5e-06
Identity = 34/117 (29.06%), Postives = 60/117 (51.28%), Query Frame = 0


Query: 30  IIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRV--IAHNSTHNMLNATIVFT 89
           ++ +  + ++S+I ++G+A +I WL+V P+  +  V    +    H S  N+L   +  T
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 96

Query: 90  VKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIPT-FMQTPGNQTVLSPAVECRALDI 144
           V   NPNKR  ++   +       G+ FS++  T F Q   N TVL+P  + + L I
Sbjct: 97  VPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVI 153

[Close]

BLAST of CsGy1G014020 vs. TAIR10
Match: AT4G01410.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 47.8 bits (112), Expect = 7.9e-06
Identity = 33/122 (27.05%), Postives = 63/122 (51.64%), Query Frame = 0


Query: 37  SLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIAHNST-HNMLNATIVFTVKCYNPNK 96
           ++ +++ ++G+  +I WLV  P  PR+ V    +   N T   +++ ++ F+V   NPN+
Sbjct: 47  AIFTILVILGIIALILWLVYRPHKPRLTVVGAAIYDLNFTAPPLISTSVQFSVLARNPNR 106

Query: 97  RASVHLHSMRMIVTSMGQAFSSVIPTFMQTPGNQT--VLSPAVECRALDIETSVAPNLLI 156
           R S+H   + M VT   Q  +  +P      G+++  V++P +    + +   VA N L 
Sbjct: 107 RVSIHYDKLSMYVTYKDQIITPPLPLPPLRLGHKSTVVIAPVMGGNGIPVSPEVA-NGLK 166

[Close]

BLAST of CsGy1G014020 vs. TAIR10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 41.6 bits (96), Expect = 5.6e-04
Identity = 30/86 (34.88%), Postives = 41/86 (47.67%), Query Frame = 0


Query: 50  VICWLVVFPKNPRIFVETGRV----IAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMR 109
           +I +L + PK     VE   V    I +N  H  +NA   + +K YNP K  SV  HSMR
Sbjct: 56  LITYLTLRPKRLIYTVEAASVQEFAIGNNDDH--INAKFSYVIKSYNPEKHVSVRYHSMR 115

Query: 110 MIVTSMGQAFS-SVIPTFMQTPGNQT 131
           +      Q+ +   I  F Q P N+T
Sbjct: 116 ISTAHHNQSVAHKNISPFKQRPKNET 139

[Close]

BLAST of CsGy1G014020 vs. Swiss-Prot
Match: sp|Q9SJ52|NHL10_ARATH (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 6.4e-05
Identity = 34/117 (29.06%), Postives = 60/117 (51.28%), Query Frame = 0


Query: 30  IIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRV--IAHNSTHNMLNATIVFT 89
           ++ +  + ++S+I ++G+A +I WL+V P+  +  V    +    H S  N+L   +  T
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 96

Query: 90  VKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIPT-FMQTPGNQTVLSPAVECRALDI 144
           V   NPNKR  ++   +       G+ FS++  T F Q   N TVL+P  + + L I
Sbjct: 97  VPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVI 153

[Close]

BLAST of CsGy1G014020 vs. TrEMBL
Match: tr|A0A0A0LVK9|A0A0A0LVK9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132770 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 5.0e-71
Identity = 159/200 (79.50%), Postives = 161/200 (80.50%), Query Frame = 0


Query: 1   MRSSTTAKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN 60
           MRSSTTAKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN
Sbjct: 1   MRSSTTAKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN 60

Query: 61  PRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIP 120
           PRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIP
Sbjct: 61  PRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIP 120

Query: 121 TFMQTPGNQTVLSPAVECR-----------------ALDIETSV-----APNLL------ 169
           TFMQTPGNQTVLSPAVE                   + +I  SV      P LL      
Sbjct: 121 TFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNN 180

[Close]

BLAST of CsGy1G014020 vs. TrEMBL
Match: tr|A0A1S3CGR5|A0A1S3CGR5_CUCME (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103500709 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 6.9e-65
Identity = 145/200 (72.50%), Postives = 153/200 (76.50%), Query Frame = 0


Query: 1   MRSSTTAKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN 60
           MRS TT KGEASSS+KSSKGQNETTKKTRIIRIIGR LLSVIFLVGLAMVICWLVVFPKN
Sbjct: 1   MRSITTTKGEASSSRKSSKGQNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKN 60

Query: 61  PRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIP 120
           PR  VETG+VIAHNSTHNMLNATI FTVKCYNPNKRAS+HLHSMRMI+TSMGQAFSS +P
Sbjct: 61  PRFVVETGKVIAHNSTHNMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMP 120

Query: 121 TFMQTPGNQTVLSPAVECR-----------------ALDIETSVA-----PNLL------ 169
            FMQTPGNQTVLSPAV+                   + +I  SV      P LL      
Sbjct: 121 MFMQTPGNQTVLSPAVDVNFDYPFGHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNN 180

[Close]

BLAST of CsGy1G014020 vs. TrEMBL
Match: tr|A0A0A0LY09|A0A0A0LY09_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132760 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 9.5e-38
Identity = 94/175 (53.71%), Postives = 115/175 (65.71%), Query Frame = 0


Query: 25  TKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIAHNSTHNMLNATI 84
           TK+TR+IR++GRSLL VIFLV L M+ICWLVV PK+PR+ VETG+VIAH+ST +MLNATI
Sbjct: 13  TKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIAHSSTISMLNATI 72

Query: 85  VFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIPTFMQTPGNQTVLSPAVECR----- 144
            FTVK YNPNKRAS+H+  MRMIV +MG  FSS IP+F  TP NQTVLS AV+       
Sbjct: 73  AFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLSSAVQVNFEYPF 132

Query: 145 ------------ALDIETSV-----APNLL----------INDTRTFENTKCNVD 168
                       + ++  S+      P LL          IND+  F+NTKC VD
Sbjct: 133 GYTEEINPELQFSAEVSYSIKKWMSKPRLLEIYCNHILLKINDSTAFDNTKCKVD 187

[Close]

BLAST of CsGy1G014020 vs. TrEMBL
Match: tr|A0A1S3CGS4|A0A1S3CGS4_CUCME (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103500718 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.1e-37
Identity = 94/176 (53.41%), Postives = 114/176 (64.77%), Query Frame = 0


Query: 25  TKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIAHNSTHNMLNATI 84
           TK+TR+IR++GRSLL VIFLV L M+ICWLVV PK PR+ VETG+V+ H+ST +MLNATI
Sbjct: 13  TKRTRLIRLVGRSLLGVIFLVALGMIICWLVVIPKTPRLIVETGKVVVHSSTISMLNATI 72

Query: 85  VFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIPTFMQTPGNQTVLSPAVECR----- 144
            FTVK YNPNKRAS+H+  MRMIV +MG  FSS IP+F  TP NQTVL  AV+       
Sbjct: 73  AFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLWSAVQVNFEYPF 132

Query: 145 ------------ALDIETSV-----APNLL----------INDTRTFENTKCNVDL 169
                       + ++  SV      P LL          IND+ TF+NTKC VDL
Sbjct: 133 GYTEEINPELQFSAEVSYSVEKWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL 188

[Close]

BLAST of CsGy1G014020 vs. TrEMBL
Match: tr|A0A0A0LSU5|A0A0A0LSU5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132730 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 9.5e-30
Identity = 92/210 (43.81%), Postives = 118/210 (56.19%), Query Frame = 0


Query: 1   MRSSTTAKGEASSS-----KKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLV 60
           MRS+TT    ASSS     K+S   Q ETTK+TRIIRIIGRSLLSVI  + +A++ CWLV
Sbjct: 1   MRSTTTQGEGASSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLV 60

Query: 61  VFPKNPRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTS-MGQA 120
           VFP+ PR+ VET +V AH ST+  LNATIVF +K YNPNK+AS+H+ S++MIV+  MG  
Sbjct: 61  VFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLP 120

Query: 121 FSSVIPTFMQTPGNQTVLSPAVECR--------------ALDIETSVAPNLLIN------ 169
           F S IPTF   P N+ V +  V                  L++  S   + ++N      
Sbjct: 121 FHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKP 180

The following BLAST results are available for this feature:

BLAST of CsGy1G014020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648454.1	7.5e-71	79.50	PREDICTED: uncharacterized protein LOC105434469 [Cucumis sativus] >KGN64867.1 hy...	[more]
XP_008462337.1	1.1e-64	72.50	PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo]	[more]
XP_011654134.1	1.4e-37	53.71	PREDICTED: protein YLS9-like isoform X2 [Cucumis sativus] >KGN64866.1 hypothetic...	[more]
XP_008462348.1	3.2e-37	53.41	PREDICTED: protein YLS9-like [Cucumis melo]	[more]
XP_011654126.1	1.0e-35	70.80	PREDICTED: protein YLS9-like isoform X1 [Cucumis sativus]	[more]

BLAST of CsGy1G014020 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22870.1	1.6e-06	31.82	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35980.1	3.5e-06	29.06	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G01410.1	7.9e-06	27.05	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G08160.1	5.6e-04	34.88	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

BLAST of CsGy1G014020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SJ52\|NHL10_ARATH	6.4e-05	29.06	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]

BLAST of CsGy1G014020 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LVK9\|A0A0A0LVK9_CUCSA	5.0e-71	79.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132770 PE=4 SV=1	[more]
tr\|A0A1S3CGR5\|A0A1S3CGR5_CUCME	6.9e-65	72.50	NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103500709 PE=4 SV=1	[more]
tr\|A0A0A0LY09\|A0A0A0LY09_CUCSA	9.5e-38	53.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132760 PE=4 SV=1	[more]
tr\|A0A1S3CGS4\|A0A1S3CGS4_CUCME	2.1e-37	53.41	protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103500718 PE=4 SV=1	[more]
tr\|A0A0A0LSU5\|A0A0A0LSU5_CUCSA	9.5e-30	43.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132730 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G014020.1	CsGy1G014020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	PANTHER	PTHR31415	FAMILY NOT NAMED	coord: 24..140

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G014020	Cucurbita maxima (Rimu)	cgybcmaB058
CsGy1G014020	Cucurbita maxima (Rimu)	cgybcmaB061
CsGy1G014020	Cucurbita maxima (Rimu)	cgybcmaB123
CsGy1G014020	Cucurbita moschata (Rifu)	cgybcmoB054
CsGy1G014020	Cucurbita moschata (Rifu)	cgybcmoB057
CsGy1G014020	Cucurbita moschata (Rifu)	cgybcmoB113
CsGy1G014020	Cucurbita pepo (Zucchini)	cgybcpeB082
CsGy1G014020	Cucurbita pepo (Zucchini)	cgybcpeB142
CsGy1G014020	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G014020	Bottle gourd (USVL1VR-Ls)	cgyblsiB041
CsGy1G014020	Melon (DHL92) v3.5.1	cgybmeB010
CsGy1G014020	Melon (DHL92) v3.6.1	cgybmedB009
CsGy1G014020	Watermelon (Charleston Gray)	cgybwcgB014
CsGy1G014020	Watermelon (Charleston Gray)	cgybwcgB027
CsGy1G014020	Watermelon (97103) v1	cgybwmB047
CsGy1G014020	Watermelon (97103) v1	cgybwmB067
CsGy1G014020	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G014020	Silver-seed gourd	carcgybB0180
CsGy1G014020	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G014020	Watermelon (97103) v2	cgybwmbB003
CsGy1G014020	Watermelon (97103) v2	cgybwmbB026
CsGy1G014020	Wax gourd	cgybwgoB046