CsGy1G013930 (gene) Cucumber (Gy14) v2

NameCsGy1G013930
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionHistone H2B
LocationChr1 : 9571010 .. 9574779 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCCAAAGGCTGAGAAGAAGCCCGCTGAGAAGAAGCCAGCGGCGGAGGAGAAGAAGGCCGAGAAAGCTCCGGCAGAGAAGAAGCCACGAGCCGAGAAGAAGCTTCCCAAAGACGCCTCCGATAAGAAAAAGAAGAGAGCCAAGAAGAGCATTGAGACTTACAAGATCTACATCTTCAAAGTCCTCAAGCAAGTACATCCCGACATCGGAATCTCTAGCAAAGCCATGGGGATTATGAACAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAGAAGCCGACTATCACCTCTCGGGAGATCCAAACGGCGGTGCGCCTTGTTCTTCCTGGTGAGCTGGCTAAACACGCTGTCTCTGAGGGTACCAAGGCTGTTACCAAGTTCACTAGCTCTTAGATTCATAGATTTTAGGGTTTTCTCGTGTAAAAAAGCAGGATCACTTGTTCTGGATCGTGGATTTCTTTTCCTTTTGTTGCATATTTTGGAATTGAATGAATGAAAATCGGTTTACATAACCCGAATTCTTTTGCAAATTGCTTGATCCTGTACACATCGTTCTGATTGTTTGCTTGACGGTCTCTGGAGATTGACCATAATTTCACATAAACAAGTTTTTATGCCTGAGATTGAATCTGACTTCAATTAGTATTTTAGGTTTGTTGCTTTTCAATGGTACAGGAAGAAGACATTGATTCAGTGCCGATGAATGTGTTTCAAAGTTTTTCTCTTAGCTCATGTTCTAGCGTGAATCCTTTTTTTATTTATGTTTTGAAGATGCCTGTGCAAATGATTGTACAAAACAGTAGATTTCTGTGTTTTTAATGGAATTTTTCATTGTGGGGTTTCTACAATTTCTTGGATAATGGTTTCTGTGTCTCTTTGTTCGATATCTTTAATTGGGATCAGGGTGTTGAATTCATATGCATAAATCTTGAATCCAGCCTCATTTTATTGATTGGTGGTGAAAGTTGTTTTTATCCATGGGTAATGTCTGAGTTAATCCAACAAGTTAGAGAATTTTCAACCAATAAACACAGTCCCATCAATCCACAAGTTAAGCTCGGTCATTGTGGCCATTTCTTTTCACCTTTGGATGATTTTGAGTTTAAGCTAGGTAGATCTAAGGGCTTTTTGTTTAGATTTTTCTTTTTCAATTCTCTTTTGTCTTCTCGGGCTCATCAGTCACCTAGAGCATGTGTCACCAGTGTTCCTACTCTGGTGTCTCAAGGCCTCCCTCTTTGTTTGGCCCGATGAGAGTGGTTTGGAAAGAGCCAATGTCACCACACCTCCGAAGCAGTTGATTCAGAATTAATCATCAAATAGCTTCACCTTTTCATGTATTATTTAACTGCAATATTAGATAATTCCTTCATTATCGCTGCTATTGTCTAGGCTCCCTGATGACTTTGACATGCCTGAGTTCTCATCAGTTATGATTCGGTGGGATCTATTTTATGGTAATGATACACTAATGGAGAATGTATCAGATCCTTCCCACATAGATCTTGCTCATCACCAAGGTAAGGGAGGGCCAATGTGAAAGAACTTGTTTCAATGAACTTGTTTCAATTAAACTTGAAATATGCACCAGTGGTTTAGTTATTGATTGAATCGTTATGCTTGTTTGTGTTTCTGTTCTTTCTGTTTCTGATGGATGCCTAGTGAAAGAAATGTGTCACATATAAAGAACCAAAAAACTTCAATGGTACCTGCTGGGTGCTGTTAAATATTTACTATGATTTAGAAGAGATTGTGTTTTCAAGAAACAAGAACATTTGATAGGAACAGTCCTGAATCTGATGATACGGCAGTACTGTACTTCGAGTACAGTAGTAAACTTGGTCTAGAAAGTCACATTTGTTTTTTGTTGAACATCTCAATGTCTTGCTTCTGAAAAGGAACATCTTCACAGGTGACAGGGAGGCGAGACTGGGCTTAACCTTTACCTTTCAAGTTGAATTCTAATGGTTCCTGTCCTGGGGATTTTCTGGAGCAAATAAGGGTAACCCAAGGATTTGTGCCAAGTTTATTGCTCCTCTTGTTACTATATCAACAAGTAAGGATTTCACTCTTTTTCTGCTGTATTCACATTTGAATAATGTATAGCTTAAGATTGTTGGAACCATCCCTTGCATCTCTGATATTATATATCAATAGATATGCTTATGCAATTATGATGTGATTAGGTACCTCATGCATTAAGCGAAACATTTGTGGTAGCTTAGTATAATGGCTGACAGAATGATAGTTTATTGACAGTGAGCTATCTCTCTCAATTCTATCCCAAATTTGACCTGCCTTCTCTTGCATCTCTGTCTTCCTTTTAAACATCTCACTACTAACAACCTAACTATTTCACTTGCTTTTCCCAAACATATGCATAGAAAGTTTCTTTTCAATGATTATTTTACCCCTTGATCCTAACGTATGACCAAGTGGGCATGGGCATAAGCTTCAGTCGCTACCAAGTGTCAGTTTGGGTTATACATGCAAGGAAAAGAAAAAAAAAATCATTTCTCACTCTTTCTTTTTGGAAGCATTCCTGGATGCAAATTTTAATAACTTTAGTATGAGGAGGTAAGTATTATTCTTAAGAAAATTTTAATATTTGAAGCAAAGTATTTCTATTAATACTGTAGAGTTGGAAACGGTAGTTAATAATAAGTGACCAGAGGAACCCAAGCACGTGAGACTTGAGACTTGAGTGTATTTGACCTCTTTTAGGTTTCGGAATTTTTATAATATTTCCTCTACGAGAAAGACAATATGTGCCATTTGAAATTATAGCTCTAGGAAATGGAATGCAAAAAGAAATTAGAAAACTTTGGTAGGAAAGGTAACGTTGATGTTAGGAAAATTGCAAGTGCATTTGCTGTGCATCTTTGATAAAAGGAATGTGTCATCAGTTATGGAGGTGAGAGGATACTGAGAGGACGGTAATTGAACCATAGCTCCAAGTTAGATGCAATGAGCATGGGGTACGAAATGAATAACGGAGTAGTCTGAAATAAGTGTTCCAAGTAAGAGTACACGGGATTTATTAATTGCCAAAGTAGGTTTGGACTGGGTGAGCTTTTTGGAATGTACATCCTCATTCCATCTTACGCATTCAAGAAAGAAGGCAAGTCAAGGCTGATAGTTAACTGTTGTGTGGTTTAAGGAAAGGAGAATTGAATAGTAAGAACTAACTAGAGGTTCTATAGCAACACCCTACTGAATTTATAGGCAACTGTTTCTACATTCTATTCCTTTTGTTTAAGTGCTAAACATTTCGAATCCCTTATAAACAATTTCTTATAGGTTTGAACTTTCAATGTAAACTTTTCTTCAGAGTGGAGATTGACACAAAGCTTCCTTTACTTGGCGATAAATGGATTTGCTCCCTCAATGTGCCAATGGGTCCTGGAAAAACTCGTTCTATTGTATAGTGCTCGAAACTTCTTCCAGTTTTCAATGCCCGGTCCTGCTTGGTGGCAAGTAAGCAGTCCGTGTTAATTAAATCTCTTTCTTATTTTTACGATATATTATCATCTCATTCCCTACCGTTATGGACCATTCAATATGCAATAATACGTTGTGATATTACAGTGTTTGACTTCCTAGTTTGCTTTTTCTAGTAGGTGGTTCCTCGATGGCACGAGCATTGGACATCGAATAAGGTATATGATGGAGACATGATTGTTCTTCAGGGGTCAGGAGAAGATATTTTTATCGATGGAAGGTTCGACAAAATGTAA

mRNA sequence

ATGGCGCCAAAGGCTGAGAAGAAGCCCGCTGAGAAGAAGCCAGCGGCGGAGGAGAAGAAGGCCGAGAAAGCTCCGGCAGAGAAGAAGCCACGAGCCGAGAAGAAGCTTCCCAAAGACGCCTCCGATAAGAAAAAGAAGAGAGCCAAGAAGAGCATTGAGACTTACAAGATCTACATCTTCAAAGTCCTCAAGCAAGTACATCCCGACATCGGAATCTCTAGCAAAGCCATGGGGATTATGAACAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAGAAGCCGACTATCACCTCTCGGGAGATCCAAACGGCGGTGCGCCTTGTTCTTCCTGGTGAGCTGGCTAAACACGCTGTCTCTGAGGGTACCAAGGCTGTTTGTTGCTTTTCAATGGTACAGGAAGAAGACATTGATTCAGTGCCGATGAATGGTGTTGAATTCATATGCATAAATCTTGAATCCAGCCTCATTTTATTGATTGGTGGTGAAAGTTGTTTTTATCCATGGGTAATGTCTGAGTTAATCCAACAAGTTAGAGAATTTTCAACCAATAAACACAGTCCCATCAATCCACAAGTTAAGCTCGGTCATTGTGGCCATTTCTTTTCACCTTTGGATGATTTTGAGTTTAAGCTAGGTAGATCTAAGGGCTTTTTGTTTAGATTTTTCTTTTTCAATTCTCTTTTGTCTTCTCGGGCTCATCAGTCACCTAGAGCATGTGTCACCAGTGTTCCTACTCTGATAATTCCTTCATTATCGCTGCTATTGTCTAGGCTCCCTGATGACTTTGACATGCCTGAGTTCTCATCAGTTATGATTCGGTGGGATCTATTTTATGGTAATGATACACTAATGGAGAATGTATCAGATCCTTCCCACATAGATCTTGCTCATCACCAAGAAACAAGAACATTTGATAGGAACAGTCCTGAATCTGATGATACGGCAGTACTGTACTTCGAGTACAGTAAGTGGAGATTGACACAAAGCTTCCTTTACTTGGCGATAAATGGATTTGCTCCCTCAATGTGCCAATGGGTCCTGGAAAAACTCGTTCTATTGTATAGTGCTCGAAACTTCTTCCAGTTTTCAATGCCCGGTCCTGCTTGGTGGCAAGTGGTTCCTCGATGGCACGAGCATTGGACATCGAATAAGGTATATGATGGAGACATGATTGTTCTTCAGGGGTCAGGAGAAGATATTTTTATCGATGGAAGGTTCGACAAAATGTAA

Coding sequence (CDS)

ATGGCGCCAAAGGCTGAGAAGAAGCCCGCTGAGAAGAAGCCAGCGGCGGAGGAGAAGAAGGCCGAGAAAGCTCCGGCAGAGAAGAAGCCACGAGCCGAGAAGAAGCTTCCCAAAGACGCCTCCGATAAGAAAAAGAAGAGAGCCAAGAAGAGCATTGAGACTTACAAGATCTACATCTTCAAAGTCCTCAAGCAAGTACATCCCGACATCGGAATCTCTAGCAAAGCCATGGGGATTATGAACAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAGAAGCCGACTATCACCTCTCGGGAGATCCAAACGGCGGTGCGCCTTGTTCTTCCTGGTGAGCTGGCTAAACACGCTGTCTCTGAGGGTACCAAGGCTGTTTGTTGCTTTTCAATGGTACAGGAAGAAGACATTGATTCAGTGCCGATGAATGGTGTTGAATTCATATGCATAAATCTTGAATCCAGCCTCATTTTATTGATTGGTGGTGAAAGTTGTTTTTATCCATGGGTAATGTCTGAGTTAATCCAACAAGTTAGAGAATTTTCAACCAATAAACACAGTCCCATCAATCCACAAGTTAAGCTCGGTCATTGTGGCCATTTCTTTTCACCTTTGGATGATTTTGAGTTTAAGCTAGGTAGATCTAAGGGCTTTTTGTTTAGATTTTTCTTTTTCAATTCTCTTTTGTCTTCTCGGGCTCATCAGTCACCTAGAGCATGTGTCACCAGTGTTCCTACTCTGATAATTCCTTCATTATCGCTGCTATTGTCTAGGCTCCCTGATGACTTTGACATGCCTGAGTTCTCATCAGTTATGATTCGGTGGGATCTATTTTATGGTAATGATACACTAATGGAGAATGTATCAGATCCTTCCCACATAGATCTTGCTCATCACCAAGAAACAAGAACATTTGATAGGAACAGTCCTGAATCTGATGATACGGCAGTACTGTACTTCGAGTACAGTAAGTGGAGATTGACACAAAGCTTCCTTTACTTGGCGATAAATGGATTTGCTCCCTCAATGTGCCAATGGGTCCTGGAAAAACTCGTTCTATTGTATAGTGCTCGAAACTTCTTCCAGTTTTCAATGCCCGGTCCTGCTTGGTGGCAAGTGGTTCCTCGATGGCACGAGCATTGGACATCGAATAAGGTATATGATGGAGACATGATTGTTCTTCAGGGGTCAGGAGAAGATATTTTTATCGATGGAAGGTTCGACAAAATGTAA

Protein sequence

MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVCCFSMVQEEDIDSVPMNGVEFICINLESSLILLIGGESCFYPWVMSELIQQVREFSTNKHSPINPQVKLGHCGHFFSPLDDFEFKLGRSKGFLFRFFFFNSLLSSRAHQSPRACVTSVPTLIIPSLSLLLSRLPDDFDMPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQETRTFDRNSPESDDTAVLYFEYSKWRLTQSFLYLAINGFAPSMCQWVLEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGRFDKM
BLAST of CsGy1G013930 vs. NCBI nr
Match: KGN64853.1 (hypothetical protein Csa_1G132140 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 4.2e-62
Identity = 119/145 (82.07%), Postives = 120/145 (82.76%), Query Frame = 0

Query: 275 MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQETRTFDRNSPESDDTAVLYFEYSK 334
           MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQE                       
Sbjct: 1   MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQE----------------------- 60

Query: 335 WRLTQSFLYLAINGFAPSMCQWVLEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSN 394
           WRLTQSFLYLAINGFAPSMCQWVLEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSN
Sbjct: 61  WRLTQSFLYLAINGFAPSMCQWVLEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSN 120

Query: 395 KVYDGDMIVLQGSGEDIFIDGRFDK 420
           KVYDGDMIVLQGSGEDIFIDG  +K
Sbjct: 121 KVYDGDMIVLQGSGEDIFIDGSTEK 122

BLAST of CsGy1G013930 vs. NCBI nr
Match: XP_004139453.1 (PREDICTED: histone H2B.7-like [Cucumis sativus] >KGN64858.1 Histone H2B [Cucumis sativus])

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-42
Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60
           MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVCCFS 141
           PGELAKHAVSEGTKAV  F+
Sbjct: 121 PGELAKHAVSEGTKAVTKFT 140

BLAST of CsGy1G013930 vs. NCBI nr
Match: XP_011654070.1 (PREDICTED: histone H2B.7 [Cucumis sativus] >XP_011654073.1 PREDICTED: histone H2B.7 [Cucumis sativus] >KGN64852.1 Histone H2B [Cucumis sativus] >KGN64854.1 Histone H2B [Cucumis sativus])

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-42
Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60
           MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVCCFS 141
           PGELAKHAVSEGTKAV  F+
Sbjct: 121 PGELAKHAVSEGTKAVTKFT 140

BLAST of CsGy1G013930 vs. NCBI nr
Match: XP_016903018.1 (PREDICTED: LOW QUALITY PROTEIN: histone H2B.7-like [Cucumis melo])

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-42
Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60
           MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVCCFS 141
           PGELAKHAVSEGTKAV  F+
Sbjct: 121 PGELAKHAVSEGTKAVTKFT 140

BLAST of CsGy1G013930 vs. NCBI nr
Match: XP_022152883.1 (histone H2B.7 [Momordica charantia])

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-42
Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60
           MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVCCFS 141
           PGELAKHAVSEGTKAV  F+
Sbjct: 121 PGELAKHAVSEGTKAVTKFT 140

BLAST of CsGy1G013930 vs. TAIR10
Match: AT5G02570.1 (Histone superfamily protein)

HSP 1 Score: 166.4 bits (420), Expect = 3.8e-41
Identity = 124/140 (88.57%), Postives = 126/140 (90.00%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60
           MAPKAEKKPAEK P          XXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF
Sbjct: 1   MAPKAEKKPAEKAP----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVCCFS 141
           PGELAKHAVSEGTKAV  F+
Sbjct: 121 PGELAKHAVSEGTKAVTKFT 130

BLAST of CsGy1G013930 vs. TAIR10
Match: AT1G07790.1 (Histone superfamily protein)

HSP 1 Score: 165.6 bits (418), Expect = 6.5e-41
Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 0

Query: 53  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 112
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI
Sbjct: 59  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 118

Query: 113 QTAVRLVLPGELAKHAVSEGTKAVCCFS 141
           QTAVRLVLPGELAKHAVSEGTKAV  F+
Sbjct: 119 QTAVRLVLPGELAKHAVSEGTKAVTKFT 146

BLAST of CsGy1G013930 vs. TAIR10
Match: AT2G28720.1 (Histone superfamily protein)

HSP 1 Score: 164.5 bits (415), Expect = 1.4e-40
Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 0

Query: 53  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 112
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREI
Sbjct: 62  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREI 121

Query: 113 QTAVRLVLPGELAKHAVSEGTKAVCCFS 141
           QTAVRLVLPGELAKHAVSEGTKAV  F+
Sbjct: 122 QTAVRLVLPGELAKHAVSEGTKAVTKFT 149

BLAST of CsGy1G013930 vs. TAIR10
Match: AT5G59910.1 (Histone superfamily protein)

HSP 1 Score: 164.5 bits (415), Expect = 1.4e-40
Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 0

Query: 53  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 112
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREI
Sbjct: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREI 120

Query: 113 QTAVRLVLPGELAKHAVSEGTKAVCCFS 141
           QTAVRLVLPGELAKHAVSEGTKAV  F+
Sbjct: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFT 148

BLAST of CsGy1G013930 vs. TAIR10
Match: AT3G46030.1 (Histone superfamily protein)

HSP 1 Score: 163.7 bits (413), Expect = 2.5e-40
Identity = 84/88 (95.45%), Postives = 85/88 (96.59%), Query Frame = 0

Query: 53  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 112
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREI
Sbjct: 56  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREI 115

Query: 113 QTAVRLVLPGELAKHAVSEGTKAVCCFS 141
           QTAVRLVLPGELAKHAVSEGTKAV  F+
Sbjct: 116 QTAVRLVLPGELAKHAVSEGTKAVTKFT 143

BLAST of CsGy1G013930 vs. Swiss-Prot
Match: sp|Q9LZ45|H2B9_ARATH (Histone H2B.9 OS=Arabidopsis thaliana OX=3702 GN=At5g02570 PE=1 SV=3)

HSP 1 Score: 166.4 bits (420), Expect = 6.9e-40
Identity = 124/140 (88.57%), Postives = 126/140 (90.00%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60
           MAPKAEKKPAEK P          XXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF
Sbjct: 1   MAPKAEKKPAEKAP----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVCCFS 141
           PGELAKHAVSEGTKAV  F+
Sbjct: 121 PGELAKHAVSEGTKAVTKFT 130

BLAST of CsGy1G013930 vs. Swiss-Prot
Match: sp|Q9LQQ4|H2B1_ARATH (Histone H2B.1 OS=Arabidopsis thaliana OX=3702 GN=At1g07790 PE=1 SV=3)

HSP 1 Score: 165.6 bits (418), Expect = 1.2e-39
Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 0

Query: 53  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 112
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI
Sbjct: 59  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 118

Query: 113 QTAVRLVLPGELAKHAVSEGTKAVCCFS 141
           QTAVRLVLPGELAKHAVSEGTKAV  F+
Sbjct: 119 QTAVRLVLPGELAKHAVSEGTKAVTKFT 146

BLAST of CsGy1G013930 vs. Swiss-Prot
Match: sp|P40283|H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 164.5 bits (415), Expect = 2.6e-39
Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 0

Query: 53  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 112
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREI
Sbjct: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREI 120

Query: 113 QTAVRLVLPGELAKHAVSEGTKAVCCFS 141
           QTAVRLVLPGELAKHAVSEGTKAV  F+
Sbjct: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFT 148

BLAST of CsGy1G013930 vs. Swiss-Prot
Match: sp|Q1S9I9|H2B1_MEDTR (Probable histone H2B.1 OS=Medicago truncatula OX=3880 PE=3 SV=3)

HSP 1 Score: 164.5 bits (415), Expect = 2.6e-39
Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 0

Query: 53  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 112
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREI
Sbjct: 59  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREI 118

Query: 113 QTAVRLVLPGELAKHAVSEGTKAVCCFS 141
           QTAVRLVLPGELAKHAVSEGTKAV  F+
Sbjct: 119 QTAVRLVLPGELAKHAVSEGTKAVTKFT 146

BLAST of CsGy1G013930 vs. Swiss-Prot
Match: sp|Q9SI96|H2B3_ARATH (Histone H2B.3 OS=Arabidopsis thaliana OX=3702 GN=At2g28720 PE=1 SV=3)

HSP 1 Score: 164.5 bits (415), Expect = 2.6e-39
Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 0

Query: 53  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 112
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREI
Sbjct: 62  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREI 121

Query: 113 QTAVRLVLPGELAKHAVSEGTKAVCCFS 141
           QTAVRLVLPGELAKHAVSEGTKAV  F+
Sbjct: 122 QTAVRLVLPGELAKHAVSEGTKAVTKFT 149

BLAST of CsGy1G013930 vs. TrEMBL
Match: tr|A0A0A0LST3|A0A0A0LST3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132140 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.8e-62
Identity = 119/145 (82.07%), Postives = 120/145 (82.76%), Query Frame = 0

Query: 275 MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQETRTFDRNSPESDDTAVLYFEYSK 334
           MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQE                       
Sbjct: 1   MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQE----------------------- 60

Query: 335 WRLTQSFLYLAINGFAPSMCQWVLEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSN 394
           WRLTQSFLYLAINGFAPSMCQWVLEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSN
Sbjct: 61  WRLTQSFLYLAINGFAPSMCQWVLEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSN 120

Query: 395 KVYDGDMIVLQGSGEDIFIDGRFDK 420
           KVYDGDMIVLQGSGEDIFIDG  +K
Sbjct: 121 KVYDGDMIVLQGSGEDIFIDGSTEK 122

BLAST of CsGy1G013930 vs. TrEMBL
Match: tr|A0A0A0LV55|A0A0A0LV55_CUCSA (Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132130 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 8.4e-43
Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60
           MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVCCFS 141
           PGELAKHAVSEGTKAV  F+
Sbjct: 121 PGELAKHAVSEGTKAVTKFT 140

BLAST of CsGy1G013930 vs. TrEMBL
Match: tr|A0A1S4E463|A0A1S4E463_CUCME (Histone H2B OS=Cucumis melo OX=3656 GN=LOC103500805 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 8.4e-43
Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60
           MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVCCFS 141
           PGELAKHAVSEGTKAV  F+
Sbjct: 121 PGELAKHAVSEGTKAVTKFT 140

BLAST of CsGy1G013930 vs. TrEMBL
Match: tr|A0A0A0LST8|A0A0A0LST8_CUCSA (Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132680 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 8.4e-43
Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60
           MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVCCFS 141
           PGELAKHAVSEGTKAV  F+
Sbjct: 121 PGELAKHAVSEGTKAVTKFT 140

BLAST of CsGy1G013930 vs. TrEMBL
Match: tr|A0A1S3CII7|A0A1S3CII7_CUCME (pheophorbide a oxygenase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500813 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 4.6e-41
Identity = 107/214 (50.00%), Postives = 125/214 (58.41%), Query Frame = 0

Query: 241 SRAHQSPRACVTSVPTLIIPSLSLLL--------------SRLPDDFDMPEFSSVMIRWD 300
           SRAHQSPRAC T  PTL+   L  +                RLPDDFD PEFSSV I+ D
Sbjct: 188 SRAHQSPRACATRFPTLVSQGLLFVWPDENGWERANATTPPRLPDDFDKPEFSSVTIQRD 247

Query: 301 LFYGNDTLMENVSDPSHIDLAHHQETRTFDRNSP---ESDDTAVLYFEYSKW---RLTQS 360
           LFYG DTLMENVSDPSHID AHH+ T   DR  P   + D      F  +     R++  
Sbjct: 248 LFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLDSNGPWGFSGANKGNPRISAK 307

Query: 361 FL-------YLAINGFAPSM--CQWVL------------EKLVLLYSARNFFQFSMPGPA 414
           F+        + I+   P +   +WV+            +   ++ SARNFFQFSMPGPA
Sbjct: 308 FIAPCYYINKVEIDTKLPLLGDQKWVIWICSFNVPMGPGKTRSIVCSARNFFQFSMPGPA 367

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN64853.14.2e-6282.07hypothetical protein Csa_1G132140 [Cucumis sativus][more]
XP_004139453.11.3e-4297.86PREDICTED: histone H2B.7-like [Cucumis sativus] >KGN64858.1 Histone H2B [Cucumis... [more]
XP_011654070.11.3e-4297.86PREDICTED: histone H2B.7 [Cucumis sativus] >XP_011654073.1 PREDICTED: histone H2... [more]
XP_016903018.11.3e-4297.86PREDICTED: LOW QUALITY PROTEIN: histone H2B.7-like [Cucumis melo][more]
XP_022152883.11.3e-4297.86histone H2B.7 [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT5G02570.13.8e-4188.57Histone superfamily protein[more]
AT1G07790.16.5e-4196.59Histone superfamily protein[more]
AT2G28720.11.4e-4095.45Histone superfamily protein[more]
AT5G59910.11.4e-4095.45Histone superfamily protein[more]
AT3G46030.12.5e-4095.45Histone superfamily protein[more]
Match NameE-valueIdentityDescription
sp|Q9LZ45|H2B9_ARATH6.9e-4088.57Histone H2B.9 OS=Arabidopsis thaliana OX=3702 GN=At5g02570 PE=1 SV=3[more]
sp|Q9LQQ4|H2B1_ARATH1.2e-3996.59Histone H2B.1 OS=Arabidopsis thaliana OX=3702 GN=At1g07790 PE=1 SV=3[more]
sp|P40283|H2B11_ARATH2.6e-3995.45Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5[more]
sp|Q1S9I9|H2B1_MEDTR2.6e-3995.45Probable histone H2B.1 OS=Medicago truncatula OX=3880 PE=3 SV=3[more]
sp|Q9SI96|H2B3_ARATH2.6e-3995.45Histone H2B.3 OS=Arabidopsis thaliana OX=3702 GN=At2g28720 PE=1 SV=3[more]
Match NameE-valueIdentityDescription
tr|A0A0A0LST3|A0A0A0LST3_CUCSA2.8e-6282.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132140 PE=4 SV=1[more]
tr|A0A0A0LV55|A0A0A0LV55_CUCSA8.4e-4397.86Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132130 PE=3 SV=1[more]
tr|A0A1S4E463|A0A1S4E463_CUCME8.4e-4397.86Histone H2B OS=Cucumis melo OX=3656 GN=LOC103500805 PE=3 SV=1[more]
tr|A0A0A0LST8|A0A0A0LST8_CUCSA8.4e-4397.86Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132680 PE=3 SV=1[more]
tr|A0A1S3CII7|A0A1S3CII7_CUCME4.6e-4150.00pheophorbide a oxygenase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500813 ... [more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0010277chlorophyllide a oxygenase [overall] activity
GO:0046982protein heterodimerization activity
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
Vocabulary: INTERPRO
TermDefinition
IPR013626PaO
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3
IPR000558Histone_H2B
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
molecular_function GO:0010277 chlorophyllide a oxygenase [overall] activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G013930.1CsGy1G013930.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000558Histone H2BPRINTSPR00621HISTONEH2Bcoord: 74..94
score: 75.74
coord: 55..73
score: 80.55
coord: 96..113
score: 76.51
coord: 126..139
score: 79.05
coord: 113..126
score: 92.45
IPR000558Histone H2BSMARTSM00427h2b3coord: 45..141
e-value: 1.9E-69
score: 246.7
IPR000558Histone H2BPANTHERPTHR23428HISTONE H2Bcoord: 1..140
IPR000558Histone H2BPROSITEPS00357HISTONE_H2Bcoord: 110..132
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 6..118
e-value: 6.0E-21
score: 75.1
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 3..141
e-value: 2.8E-55
score: 187.7
IPR009072Histone-foldSUPERFAMILYSSF47113Histone-foldcoord: 27..139
IPR013626Pheophorbide a oxygenasePFAMPF08417PaOcoord: 366..407
e-value: 1.6E-6
score: 28.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..47
NoneNo IPR availablePANTHERPTHR23428:SF97HISTONE H2B.11-RELATEDcoord: 1..140

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G013930MELO3C004867.2Melon (DHL92) v3.6.1cgybmedB009
The following gene(s) are paralogous to this gene:

None