CsGy1G012790 (gene) Cucumber (Gy14) v2

NameCsGy1G012790
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr1 : 8206902 .. 8208119 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCCACTTGCTCTGCCAAAGCAAGGAAGAATTCCAAGAACCAATCGCCTGAAGTCAAGCTGCAGTTAGACCTCACTGAGTGTTAGAGGAGGAAAGATTTACTTTCGGCCATAACTCTCTACGAAACTGCAGTTTCAGAGAAGTTGAAATTCAATAGGCAACACTTTAATACTCTCCTCTACCTATGTTCTACCGCTATTTCTATCCCCTCATTGAAAGAATCCGCCGTAAGTCACTGTTGTATATAACAATCCCCTCATTGTATATAATCTCTTGCAATCCATTGGTGTTATTTCCTAATGAAGCTACAGTCACTGTTGGTGCAACGCTCACCGCAGTAAAAAGAGACGGCTATTGAGAATTTGTCGTTATATGCAATGCAAGAATCTGATACCATTAATGTGGTTCTTTTTCTTTTTTCTTTTTTTTGTTTTATTTGTTCTTTCAGGTGTGCAGTCTGTGAAAGCTGAGGTTGTGCTTTCTCTGTGTTTGAAAATTCCGGTGAGTTTAATTAGCCTTTGTGTTTGCTCTGTGTATTTATAGAGAGAGAGAGAGGATTGATGAAATTGATCCAATTGGAAATTTGCTAACAAAATCTTTTTAATATAAAAATATTATACATTTTCTTTTCTCACGATAAAATATTCTTAATTAAATTTAACACGAACGTTGGATGGAAAAAAAAAAGAGAGAAACAAAAATCAAGAACAATACCCTAAAACAAAGCAACACAATCCAACTTCAATTTATAATACACAAAAATAAAACCAATAGCAAAAAGTACAATAGATTGAAACCTCTCCGAGAAAACACCCAAGCAAATTAGGTCAAGAATTTATCCAAACCAACATTATTCCGACGACAACAGCAGCTCCGGTCGAGATGACCGAGACCCCAGCAAGAGGCACGGCGGAGGAGTTGTCATCGTCGGAATCCTTAGGGCTTTCAGAATTGCCCTTGGCCTTCTTCTTGGACTTCTCGGGTGCGGGAGCCGGGGGCGGGGGACGAGGCTGGAAGACACCAATCGGTTTGAGAACGGAGTCGATTTGGTAGATGGCGAGCTGGTTGTCGGTATAGACAGTGCCGGAGATGGAGGTGTTGACGAGGCCGGAGGAGACGTTGACGGAGTTGCCGGAGGTGGTGACGTTGAGAGGGAACTCGTAGGCGTCTCCGGCCTGAGTTCTCACCGGATTGCTGATTGTTTGGAAGTTTGA

mRNA sequence

ATGGATTCCACTTGCTCTGCCAAAGCAAGGAAGAATTCCAAGAACCAATCGCCTGAAGTCAAGCTGCAGTTAGACCTCACTGAGTGTGTGCAGTCTGTGAAAGCTGAGGTTGTGCTTTCTCTGTGTTTGAAAATTCCGAAAACACCCAAGCAAATTAGGTCAAGAATTTATCCAAACCAACATTATTCCGACGACAACAGCAGCTCCGGTCGAGATGACCGAGACCCCAGCAAGAGGCACGGCGGAGGAGTTGTCATCGTCGGAATCCTTAGGGCTTTCAGAATTGCCCTTGGCCTTCTTCTTGGACTTCTCGGGTGCGGGAGCCGGGGGCGGGGGACGAGGCTGGAAGACACCAATCGGTTTGAGAACGGAGTCGATTTGGTAGATGGCGAGCTGGTTGTCGGTATAGACAGTGCCGGAGATGGAGGTGTTGACGAGGCCGGAGGAGACGTTGACGGAGTTGCCGGAGGTGGTGACGTTGAGAGGGAACTCGTAGGCGTCTCCGGCCTGAGTTCTCACCGGATTGCTGATTGTTTGGAAGTTTGA

Coding sequence (CDS)

ATGGATTCCACTTGCTCTGCCAAAGCAAGGAAGAATTCCAAGAACCAATCGCCTGAAGTCAAGCTGCAGTTAGACCTCACTGAGTGTGTGCAGTCTGTGAAAGCTGAGGTTGTGCTTTCTCTGTGTTTGAAAATTCCGAAAACACCCAAGCAAATTAGGTCAAGAATTTATCCAAACCAACATTATTCCGACGACAACAGCAGCTCCGGTCGAGATGACCGAGACCCCAGCAAGAGGCACGGCGGAGGAGTTGTCATCGTCGGAATCCTTAGGGCTTTCAGAATTGCCCTTGGCCTTCTTCTTGGACTTCTCGGGTGCGGGAGCCGGGGGCGGGGGACGAGGCTGGAAGACACCAATCGGTTTGAGAACGGAGTCGATTTGGTAGATGGCGAGCTGGTTGTCGGTATAGACAGTGCCGGAGATGGAGGTGTTGACGAGGCCGGAGGAGACGTTGACGGAGTTGCCGGAGGTGGTGACGTTGAGAGGGAACTCGTAGGCGTCTCCGGCCTGAGTTCTCACCGGATTGCTGATTGTTTGGAAGTTTGA

Protein sequence

MDSTCSAKARKNSKNQSPEVKLQLDLTECVQSVKAEVVLSLCLKIPKTPKQIRSRIYPNQHYSDDNSSSGRDDRDPSKRHGGGVVIVGILRAFRIALGLLLGLLGCGSRGRGTRLEDTNRFENGVDLVDGELVVGIDSAGDGGVDEAGGDVDGVAGGGDVERELVGVSGLSSHRIADCLEV
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G012790.1CsGy1G012790.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..79

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G012790Cucumber (Gy14) v2cgybcgybB040
CsGy1G012790Cucurbita maxima (Rimu)cgybcmaB061
CsGy1G012790Cucurbita maxima (Rimu)cgybcmaB110
CsGy1G012790Cucurbita maxima (Rimu)cgybcmaB124
CsGy1G012790Cucurbita moschata (Rifu)cgybcmoB057
CsGy1G012790Cucurbita moschata (Rifu)cgybcmoB104
CsGy1G012790Cucurbita moschata (Rifu)cgybcmoB114
CsGy1G012790Cucurbita pepo (Zucchini)cgybcpeB036
CsGy1G012790Cucurbita pepo (Zucchini)cgybcpeB084
CsGy1G012790Cucurbita pepo (Zucchini)cgybcpeB090
CsGy1G012790Cucumber (Chinese Long) v2cgybcuB001
CsGy1G012790Cucumber (Chinese Long) v2cgybcuB046
CsGy1G012790Bottle gourd (USVL1VR-Ls)cgyblsiB003
CsGy1G012790Bottle gourd (USVL1VR-Ls)cgyblsiB020
CsGy1G012790Melon (DHL92) v3.5.1cgybmeB009
CsGy1G012790Melon (DHL92) v3.5.1cgybmeB010
CsGy1G012790Melon (DHL92) v3.6.1cgybmedB008
CsGy1G012790Melon (DHL92) v3.6.1cgybmedB009
CsGy1G012790Watermelon (Charleston Gray)cgybwcgB032
CsGy1G012790Watermelon (Charleston Gray)cgybwcgB035
CsGy1G012790Watermelon (97103) v1cgybwmB012
CsGy1G012790Watermelon (97103) v1cgybwmB072
CsGy1G012790Wild cucumber (PI 183967)cgybcpiB001
CsGy1G012790Wild cucumber (PI 183967)cgybcpiB043
CsGy1G012790Silver-seed gourdcarcgybB0449
CsGy1G012790Silver-seed gourdcarcgybB0723
CsGy1G012790Cucumber (Chinese Long) v3cgybcucB002
CsGy1G012790Cucumber (Chinese Long) v3cgybcucB050
CsGy1G012790Watermelon (97103) v2cgybwmbB030
CsGy1G012790Watermelon (97103) v2cgybwmbB034
CsGy1G012790Wax gourdcgybwgoB017
CsGy1G012790Wax gourdcgybwgoB034