CsGy1G012520 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G012520
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 7930049 .. 7930855 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAAAACTCAAGCCAAACGACAGCGTATTCCCCGGAGAGGACCTGGCGTTGCCGAGCTTGAGAAGATCCTCAAGGAGCAAGAAAGCGGTGCCGCCACTGATCATCAACACACTTCTTCGCCCCACACTAATTCTACTTCTACTGCTGCTACTACTACTACTCATCCCTTGTCATTAAACCCTCCACGGCCTCCGCCACCGCCTCCGCCTCCGCCGCTTGTTCAGATAATGACGCCGTCGCCGCCGCCGCTCCCGCGTGACTATGTTGCTTGGTCGAATAATCTTCCGTTGTTTCCAACTCTTGAATTTATTCCCCCGCCTTATCTGCCAACGGTCGTTACCGAAAAACCCTTGTTTCCGACGACACGAATGTCGGAGTCACAGCTGAATTTGGCTCCGTATTTTCTCCCGAGTTTTCAATACTCTGCTTCGTCCTTCAATCCTGACCAATATTATAATCCGATGGTGAGACGAGGATCGAGATGAGATCTTATATATATATATATATATATTCTCTTTAGGGATTTTAAAATAAAGAAGTGTATGGAAATTTGATTAATAAAACTTTGTCAGGTGAATGTTAATCAAGGATCTGGATCATCGTGTCCGTCAGCGACGTCATCGTCGGCGGGGAGACATTTTCGTGAAATAGAGCACCCTTCAAGCCAAATATCTACGGATTTCAACAACATTTGGAACTCGCCGGAGGAAGAAGAAAAGGCAAATTACTTCTCCTTACTTTTTATTTTTCGAATAAGGATAATTTTATTTCCATTCTTAAAATTTAAAAATGTTACAACATAA

mRNA sequence

ATGAGGAAAACTCAAGCCAAACGACAGCGTATTCCCCGGAGAGGACCTGGCGTTGCCGAGCTTGAGAAGATCCTCAAGGAGCAAGAAAGCGGTGCCGCCACTGATCATCAACACACTTCTTCGCCCCACACTAATTCTACTTCTACTGCTGCTACTACTACTACTCATCCCTTGTCATTAAACCCTCCACGGCCTCCGCCACCGCCTCCGCCTCCGCCGCTTGTTCAGATAATGACGCCGTCGCCGCCGCCGCTCCCGCGTGACTATGTTGCTTGGTCGAATAATCTTCCGTTGTTTCCAACTCTTGAATTTATTCCCCCGCCTTATCTGCCAACGGTCGTTACCGAAAAACCCTTGTTTCCGACGACACGAATGTCGGAGTCACAGCTGAATTTGGCTCCGTATTTTCTCCCGAGTTTTCAATACTCTGCTTCGTCCTTCAATCCTGACCAATATTATAATCCGATGGTGAATGTTAATCAAGGATCTGGATCATCGTGTCCGTCAGCGACGTCATCGTCGGCGGGGAGACATTTTCGTGAAATAGAGCACCCTTCAAGCCAAATATCTACGGATTTCAACAACATTTGGAACTCGCCGGAGGAAGAAGAAAAGGCAAATTACTTCTCCTTACTTTTTATTTTTCGAATAAGGATAATTTTATTTCCATTCTTAAAATTTAAAAATGTTACAACATAA

Coding sequence (CDS)

ATGAGGAAAACTCAAGCCAAACGACAGCGTATTCCCCGGAGAGGACCTGGCGTTGCCGAGCTTGAGAAGATCCTCAAGGAGCAAGAAAGCGGTGCCGCCACTGATCATCAACACACTTCTTCGCCCCACACTAATTCTACTTCTACTGCTGCTACTACTACTACTCATCCCTTGTCATTAAACCCTCCACGGCCTCCGCCACCGCCTCCGCCTCCGCCGCTTGTTCAGATAATGACGCCGTCGCCGCCGCCGCTCCCGCGTGACTATGTTGCTTGGTCGAATAATCTTCCGTTGTTTCCAACTCTTGAATTTATTCCCCCGCCTTATCTGCCAACGGTCGTTACCGAAAAACCCTTGTTTCCGACGACACGAATGTCGGAGTCACAGCTGAATTTGGCTCCGTATTTTCTCCCGAGTTTTCAATACTCTGCTTCGTCCTTCAATCCTGACCAATATTATAATCCGATGGTGAATGTTAATCAAGGATCTGGATCATCGTGTCCGTCAGCGACGTCATCGTCGGCGGGGAGACATTTTCGTGAAATAGAGCACCCTTCAAGCCAAATATCTACGGATTTCAACAACATTTGGAACTCGCCGGAGGAAGAAGAAAAGGCAAATTACTTCTCCTTACTTTTTATTTTTCGAATAAGGATAATTTTATTTCCATTCTTAAAATTTAAAAATGTTACAACATAA

Protein sequence

MRKTQAKRQRIPRRGPGVAELEKILKEQESGAATDHQHTSSPHTNSTSTAATTTTHPLSLNPPRPPPPPPPPPLVQIMTPSPPPLPRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPLFPTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRHFREIEHPSSQISTDFNNIWNSPEEEEKANYFSLLFIFRIRIILFPFLKFKNVTT
Homology
[Close]
BLAST of CsGy1G012520 vs. NCBI nr
Match: KGN64713.1 (hypothetical protein Csa_1G077140 [Cucumis sativus])

HSP 1 Score: 293.9 bits (751), Expect = 4.8e-76
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0 

Query: 1   MRKTQAKRQRIPRRGPGVAELEKILKEQESGAATDHXXXXXXXXXXXXXXXXXXXXXXXX 60
           MRKTQAKRQRIPRRGPGVAELEKILKEQESGAATDHXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MRKTQAKRQRIPRRGPGVAELEKILKEQESGAATDHXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPLF 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPLF
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPLF 120

Query: 121 PTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRHFR 180
           PTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRHFR
Sbjct: 121 PTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRHFR 180

Query: 181 EIEHPSSQISTDFNNIWNSPEEEEK 206
           EIEHPSSQISTDFNNIWNSPEEEEK
Sbjct: 181 EIEHPSSQISTDFNNIWNSPEEEEK 205

[Close]
BLAST of CsGy1G012520 vs. NCBI nr
Match: XP_011648446.1 (PREDICTED: CREB-regulated transcription coactivator 1-like [Cucumis sativus])

HSP 1 Score: 293.9 bits (751), Expect = 4.8e-76
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0 

Query: 1   MRKTQAKRQRIPRRGPGVAELEKILKEQESGAATDHXXXXXXXXXXXXXXXXXXXXXXXX 60
           MRKTQAKRQRIPRRGPGVAELEKILKEQESGAATDHXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MRKTQAKRQRIPRRGPGVAELEKILKEQESGAATDHXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPLF 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPLF
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPLF 120

Query: 121 PTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRHFR 180
           PTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRHFR
Sbjct: 121 PTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRHFR 180

Query: 181 EIEHPSSQISTDFNNIWNSPEEEEK 206
           EIEHPSSQISTDFNNIWNSPEEEEK
Sbjct: 181 EIEHPSSQISTDFNNIWNSPEEEEK 205

[Close]
BLAST of CsGy1G012520 vs. NCBI nr
Match: XP_008443003.1 (PREDICTED: uncharacterized protein DDB_G0271670-like [Cucumis melo])

HSP 1 Score: 254.6 bits (649), Expect = 3.2e-64
Identity = 178/207 (85.99%), Postives = 187/207 (90.34%), Query Frame = 0 

Query: 1   MRKTQAKRQRIPRRGPGVAELEKILKEQES-GAATDHXXXXXXXXXXXXXXXXXXXXXXX 60
           MRKTQAKRQRIPRRGPGVAELEKILKEQES GA+TD             XXXXXXXXXXX
Sbjct: 1   MRKTQAKRQRIPRRGPGVAELEKILKEQESGGASTDQ-----HISPHTNXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPL 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXRDYV+W+NNLPLFPTLEFIPPPYLPTV  EKPL
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXRDYVSWTNNLPLFPTLEFIPPPYLPTVAAEKPL 120

Query: 121 FPTTRMSE-SQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRH 180
           FPTTR+SE SQLNLAPYFLP+FQ+SASS NPDQYYNPMVN+NQGSGSSCPSATSSSAGR+
Sbjct: 121 FPTTRISEASQLNLAPYFLPTFQFSASSCNPDQYYNPMVNINQGSGSSCPSATSSSAGRY 180

Query: 181 FREIEHPSSQISTDFNNIWNSPEEEEK 206
            REIEHPSSQISTDFNNIW SPEE+EK
Sbjct: 181 LREIEHPSSQISTDFNNIWTSPEEQEK 202

[Close]
BLAST of CsGy1G012520 vs. NCBI nr
Match: XP_023520013.1 (uncharacterized protein LOC111783325 [Cucurbita pepo subsp. pepo] >XP_023520014.1 uncharacterized protein LOC111783325 [Cucurbita pepo subsp. pepo] >XP_023520016.1 uncharacterized protein LOC111783325 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 147.5 bits (371), Expect = 5.6e-32
Identity = 144/211 (68.25%), Postives = 163/211 (77.25%), Query Frame = 0 

Query: 1   MRKTQAKRQRIPRRGPGVAELEKILKEQESGA-ATDHXXXXXXXXXXXXXXXXXXXXXXX 60
           M+KT  KR RIPRRGPGVAELEKILKEQ+ GA     XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MKKTHPKRHRIPRRGPGVAELEKILKEQQGGADXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPT-----VV 120
           XXXXXXXXXXXXXXXXXXXXXXXXXX RDY +WS NLPLFPTL+FIPP  LPT       
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXTRDYASWS-NLPLFPTLDFIPPA-LPTPTPAVAA 120

Query: 121 TEKPLFPTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSS 180
            EKPLFPTTR S++Q+NL P+F P+FQYSASS      +N M+N+        P + +S 
Sbjct: 121 VEKPLFPTTRKSDAQINLPPHFFPTFQYSASS------HNLMMNI-------IPGSATSP 180

Query: 181 AGRHFREIEHPSSQISTDFNNIWNSPEEEEK 206
           A R++R+IEHPSSQIST  NN W SPEE++K
Sbjct: 181 AARYYRQIEHPSSQISTQSNNTWTSPEEQQK 196

[Close]
BLAST of CsGy1G012520 vs. NCBI nr
Match: XP_022927210.1 (nuclear envelope pore membrane protein POM 121-like [Cucurbita moschata] >XP_022927212.1 nuclear envelope pore membrane protein POM 121-like [Cucurbita moschata] >XP_022927213.1 nuclear envelope pore membrane protein POM 121-like [Cucurbita moschata])

HSP 1 Score: 144.8 bits (364), Expect = 3.6e-31
Identity = 142/213 (66.67%), Postives = 160/213 (75.12%), Query Frame = 0 

Query: 1   MRKTQAKRQRIPRRGPGVAELEKILK---EQESGAATDHXXXXXXXXXXXXXXXXXXXXX 60
           M+KTQ KR RIPRRGPGVAELEKILK             XXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MKKTQPKRHRIPRRGPGVAELEKILKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPT----- 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXX  RDY +WS NLPLFPTL+FIPP  LPT     
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXLTRDYASWS-NLPLFPTLDFIPPA-LPTPTPAA 120

Query: 121 VVTEKPLFPTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATS 180
              EKPLFPTTR S++Q+NL P+F P+FQYSASS      +NPM+N+        P + +
Sbjct: 121 AAVEKPLFPTTRKSDAQINLPPHFFPTFQYSASS------HNPMMNI-------IPGSAT 180

Query: 181 SSAGRHFREIEHPSSQISTDFNNIWNSPEEEEK 206
           S A R++R+IEHPSSQIST FNN W SPEE++K
Sbjct: 181 SPAARYYRQIEHPSSQISTQFNNTWTSPEEQQK 198

[Close]
BLAST of CsGy1G012520 vs. TrEMBL
Match: tr|A0A0A0LSF6|A0A0A0LSF6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G077140 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 3.2e-76
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0 

Query: 1   MRKTQAKRQRIPRRGPGVAELEKILKEQESGAATDHXXXXXXXXXXXXXXXXXXXXXXXX 60
           MRKTQAKRQRIPRRGPGVAELEKILKEQESGAATDHXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MRKTQAKRQRIPRRGPGVAELEKILKEQESGAATDHXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPLF 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPLF
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPLF 120

Query: 121 PTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRHFR 180
           PTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRHFR
Sbjct: 121 PTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRHFR 180

Query: 181 EIEHPSSQISTDFNNIWNSPEEEEK 206
           EIEHPSSQISTDFNNIWNSPEEEEK
Sbjct: 181 EIEHPSSQISTDFNNIWNSPEEEEK 205

[Close]
BLAST of CsGy1G012520 vs. TrEMBL
Match: tr|A0A1S3B6J8|A0A1S3B6J8_CUCME (uncharacterized protein DDB_G0271670-like OS=Cucumis melo OX=3656 GN=LOC103486731 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.1e-64
Identity = 178/207 (85.99%), Postives = 187/207 (90.34%), Query Frame = 0 

Query: 1   MRKTQAKRQRIPRRGPGVAELEKILKEQES-GAATDHXXXXXXXXXXXXXXXXXXXXXXX 60
           MRKTQAKRQRIPRRGPGVAELEKILKEQES GA+TD             XXXXXXXXXXX
Sbjct: 1   MRKTQAKRQRIPRRGPGVAELEKILKEQESGGASTDQ-----HISPHTNXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPL 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXRDYV+W+NNLPLFPTLEFIPPPYLPTV  EKPL
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXRDYVSWTNNLPLFPTLEFIPPPYLPTVAAEKPL 120

Query: 121 FPTTRMSE-SQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRH 180
           FPTTR+SE SQLNLAPYFLP+FQ+SASS NPDQYYNPMVN+NQGSGSSCPSATSSSAGR+
Sbjct: 121 FPTTRISEASQLNLAPYFLPTFQFSASSCNPDQYYNPMVNINQGSGSSCPSATSSSAGRY 180

Query: 181 FREIEHPSSQISTDFNNIWNSPEEEEK 206
            REIEHPSSQISTDFNNIW SPEE+EK
Sbjct: 181 LREIEHPSSQISTDFNNIWTSPEEQEK 202

The following BLAST results are available for this feature:
BLAST of CsGy1G012520 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64713.14.8e-76100.00hypothetical protein Csa_1G077140 [Cucumis sativus][more]
XP_011648446.14.8e-76100.00PREDICTED: CREB-regulated transcription coactivator 1-like [Cucumis sativus][more]
XP_008443003.13.2e-6485.99PREDICTED: uncharacterized protein DDB_G0271670-like [Cucumis melo][more]
XP_023520013.15.6e-3268.25uncharacterized protein LOC111783325 [Cucurbita pepo subsp. pepo] >XP_023520014.... [more]
XP_022927210.13.6e-3166.67nuclear envelope pore membrane protein POM 121-like [Cucurbita moschata] >XP_022... [more]
BLAST of CsGy1G012520 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G012520 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G012520 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LSF6|A0A0A0LSF6_CUCSA3.2e-76100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G077140 PE=4 SV=1[more]
tr|A0A1S3B6J8|A0A1S3B6J8_CUCME2.1e-6485.99uncharacterized protein DDB_G0271670-like OS=Cucumis melo OX=3656 GN=LOC10348673... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G012520.1CsGy1G012520.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..33

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G012520MELO3C002635Melon (DHL92) v3.5.1cgybmeB022
CsGy1G012520CmoCh13G006400Cucurbita moschata (Rifu)cgybcmoB068
CsGy1G012520CmoCh18G003820Cucurbita moschata (Rifu)cgybcmoB082
CsGy1G012520Lsi02G007900Bottle gourd (USVL1VR-Ls)cgyblsiB018
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G012520Cucumber (Gy14) v2cgybcgybB025
CsGy1G012520Cucurbita maxima (Rimu)cgybcmaB074
CsGy1G012520Cucumber (Chinese Long) v2cgybcuB001
CsGy1G012520Melon (DHL92) v3.6.1cgybmedB020
CsGy1G012520Wild cucumber (PI 183967)cgybcpiB001
CsGy1G012520Silver-seed gourdcarcgybB0936
CsGy1G012520Cucumber (Chinese Long) v3cgybcucB002
CsGy1G012520Cucumber (Chinese Long) v3cgybcucB034
CsGy1G012520Watermelon (97103) v2cgybwmbB024
CsGy1G012520Wax gourdcgybwgoB049