CsGy1G012080 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G012080
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Pentatricopeptide repeat-containing protein, mitochondrial
Location	Chr1 : 7593793 .. 7595993 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCACCTAATGTTTTTCTTCACATCAGCTGAAGAGCTCACTGTCCTTCAATACTTGGGCATCGCCTAGTTTCTCCATTTTTTCTCCTCTCTTTTGCCTTTCCAAATGAAGCTCTTACAATCTCTAAAACCAATTAATTTGATTGCATTCCGGAGAGAATTCGTGAATTTCTACTCTACAGTTGTGAAGGATAGCCTTTACAGAAGGATTTCTCCGGTGGGTGACCCTAATATCTCTGTAACTCCACTTCTTGATCAGTGGGTGTTAGAAAGCGGGCTTGTTCAGCAAGACGAACTTCGGCATATCATCAAGGAGCTTAGGGTTTACAAGCGGTTCAAACATGCTCTTGAGGTTTGATTTCTTATTCATATCTTCGTCGAAGTATGATGGTTTTCATTTGCTCTTATGTGAAATGCTTTTGTTGATTGATGCAAATGGGTCCAATCGATTTGGCATTGTTGATTTTTTAAGATGAATAATGTGTTCATCTAGTGGACAATGTGCCGCCTCCATAAAAAGGTAATTGGTTTTAACTTCGACACAAAAACTCATTAAACTTGGTATTAGAGTGAGTAACATTGTTTCCAAGGTGAACCAAGTTTTATATCTCTTGTTTTTTGGTAATATTATTCGTATAACAGCTCTAACCAATGAAGTAATGAAATTAGTTCGTCAGGAGGCAACTCTAGATTCTTGAGGGAGATGATTTTATTTTCTATTTCCTCGTAGATTACATATCATACTTGATTTGATCTCAAATTCATGTCTGATAACTATTTCTTGTCATTGATAGTTTGTCTTGCTGTTCTACCAATGCTTTGTTTATACTGTAGAGTTCACTTTCATGGAACTAGCTTGCTTTTCCTCCCAATTCTTAACTGGCAAGAATAACGAATACATTGGAGAGGATTTGCTTTCCATGTTCTTTCTGACATATCAAAGAAGCCACATTGTGGAGAGTTCTTGGCTTATTGATTTCATATTAAATTGAAATATTCATTGTGTTTTACCCAGTATTATTGTTTTGACCCATCTCTTCAAACCCCCTTTCATCTTCAGATATCAAAGTGGATGAGTGATAAAAGATACTTTCCTTTATCGACTGCTGATATCGCAACACGGATGAATTTGATCTTAAGAGTTCATGGATTGGAACAGGTGGAAGATTATTTCAATAACATGCCTAGTCAGTTGAAAAGGTGTCAAGTTCATATAGCTCTTCTTAACTGCTATGCGCATGAAAAGTATGCGGATAAAGCCAATGCCGTCCTGCAGAAAATCAAGGAAATGGGTTTTGCTAAAACTTCTCTTCCATACAATATCACGATGAATCTTTATCATCAAATTGGAGAATTTGAGAGATTAGATTCTCCGTTGAAAGAGACGGATGTTGATCACGATCAATTCACATATACCACCCGACTAAGTGCATATGCTACTGCATTTGATTTTACGGGAATCGAAAAGATCATGGAACAAATGGAATGAAATACGAGTATTGTTCTAGATTGGAACTGTTATGTCATTGCTGCAAATGCTTACAATAAAGTTGGCTTAATTAGACAAATCCATTTCCATGCTGAAGAAATCAGAAGGTCTCCTAGCAAATGTCAAAAAGAAAGGTTTTGCATTTAATGTCTACCTCAAACTATATGCCAGAAATGGAAAGAAAGACGAGATACACCTTATATGGAATCTCTACAAGAAAGAGAAAATCTTCAACAAAGGTTTCATCAGCATGATAACATCACTTTTTGTATTAGACGATATCAAAGGTGCGGAGCGTATTTACAAGGAATGGGAGACCCAGAAACTGTCATACGACTTGCGGATTCCAAACTTGTTGGTTGATGCGTATTGTAGAGCTGGTCTAATGGAGAGCTGAAGACCTTGTAAATGAGATGGTGACTGTAAGAGGCAAGTTTTCGGTCAAGTCGTGGTGCTATTTAGCGAGTGGATATCTTCAGAAGGATCAACTACCTCAGGCAGTTGAGACACTGAAGAAAGCAGCCAGTTTGTGTCCATCAGAACTGAACTACGCCAAGGAAATTTTGGCAGCATTTTTGGATGGGAAGCAAGATGAGGAAGAAACTGAGAAAGTGGTTAATTTGTTGAGGGAAAAAGATGACTCTCATCCTGCTCGTGCTCATGATATATTGGTAGAGCGATGATGACGGAATCTGCCAAATTTAACTTTTCT

mRNA sequence

TTTCCACCTAATGTTTTTCTTCACATCAGCTGAAGAGCTCACTGTCCTTCAATACTTGGGCATCGCCTAGTTTCTCCATTTTTTCTCCTCTCTTTTGCCTTTCCAAATGAAGCTCTTACAATCTCTAAAACCAATTAATTTGATTGCATTCCGGAGAGAATTCGTGAATTTCTACTCTACAGTTGTGAAGGATAGCCTTTACAGAAGGATTTCTCCGGTGGGTGACCCTAATATCTCTGTAACTCCACTTCTTGATCAGTGGGTGTTAGAAAGCGGGCTTGTTCAGCAAGACGAACTTCGGCATATCATCAAGGAGCTTAGGGTTTACAAGCGGTTCAAACATGCTCTTGAGATATCAAAGTGGATGAGTGATAAAAGATACTTTCCTTTATCGACTGCTGATATCGCAACACGGATGAATTTGATCTTAAGAGTTCATGGATTGGAACAGGTGGAAGATTATTTCAATAACATGCCTAGTCAGTTGAAAAGGTGTCAAGTTCATATAGCTCTTCTTAACTGCTATGCGCATGAAAAGTATGCGGATAAAGCCAATGCCGTCCTGCAGAAAATCAAGGAAATGGGTTTTGCTAAAACTTCTCTTCCATACAATATCACGATGAATCTTTATCATCAAATTGGAGAATTTGAGAGATTAGATTCTCCGTTGAAAGAGACGGATGTTGATCACGATCAATTCACATATACCACCCGACTAAGTGCATATGCTACTGCATTTGATTTTACGGGAATCGAAAAGATCATGGAACAAATGGAATGAAATACGAGTATTGTTCTAGATTGGAACTGTTATGTCATTGCTGCAAATGCTTACAATAAAGTTGGCTTAATTAGACAAATCCATTTCCATGCTGAAGAAATCAGAAGGTCTCCTAGCAAATGTCAAAAAGAAAGGTTTTGCATTTAATGTCTACCTCAAACTATATGCCAGAAATGGAAAGAAAGACGAGATACACCTTATATGGAATCTCTACAAGAAAGAGAAAATCTTCAACAAAGGTTTCATCAGCATGATAACATCACTTTTTGTATTAGACGATATCAAAGGTGCGGAGCGTATTTACAAGGAATGGGAGACCCAGAAACTGTCATACGACTTGCGGATTCCAAACTTGTTGGTTGATGCGTATTGTAGAGCTGGTCTAATGGAGAGCTGAAGACCTTGTAAATGAGATGGTGACTGTAAGAGGCAAGTTTTCGGTCAAGTCGTGGTGCTATTTAGCGAGTGGATATCTTCAGAAGGATCAACTACCTCAGGCAGTTGAGACACTGAAGAAAGCAGCCAGTTTGTGTCCATCAGAACTGAACTACGCCAAGGAAATTTTGGCAGCATTTTTGGATGGGAAGCAAGATGAGGAAGAAACTGAGAAAGTGGTTAATTTGTTGAGGGAAAAAGATGACTCTCATCCTGCTCGTGCTCATGATATATTGGTAGAGCGATGATGACGGAATCTGCCAAATTTAACTTTTCT

Coding sequence (CDS)

ATGAAGCTCTTACAATCTCTAAAACCAATTAATTTGATTGCATTCCGGAGAGAATTCGTGAATTTCTACTCTACAGTTGTGAAGGATAGCCTTTACAGAAGGATTTCTCCGGTGGGTGACCCTAATATCTCTGTAACTCCACTTCTTGATCAGTGGGTGTTAGAAAGCGGGCTTGTTCAGCAAGACGAACTTCGGCATATCATCAAGGAGCTTAGGGTTTACAAGCGGTTCAAACATGCTCTTGAGATATCAAAGTGGATGAGTGATAAAAGATACTTTCCTTTATCGACTGCTGATATCGCAACACGGATGAATTTGATCTTAAGAGTTCATGGATTGGAACAGGTGGAAGATTATTTCAATAACATGCCTAGTCAGTTGAAAAGGTGTCAAGTTCATATAGCTCTTCTTAACTGCTATGCGCATGAAAAGTATGCGGATAAAGCCAATGCCGTCCTGCAGAAAATCAAGGAAATGGGTTTTGCTAAAACTTCTCTTCCATACAATATCACGATGAATCTTTATCATCAAATTGGAGAATTTGAGAGATTAGATTCTCCGTTGAAAGAGACGGATGTTGATCACGATCAATTCACATATACCACCCGACTAAGTGCATATGCTACTGCATTTGATTTTACGGGAATCGAAAAGATCATGGAACAAATGGAATGA

Protein sequence

MKLLQSLKPINLIAFRREFVNFYSTVVKDSLYRRISPVGDPNISVTPLLDQWVLESGLVQQDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIATRMNLILRVHGLEQVEDYFNNMPSQLKRCQVHIALLNCYAHEKYADKANAVLQKIKEMGFAKTSLPYNITMNLYHQIGEFERLDSPLKETDVDHDQFTYTTRLSAYATAFDFTGIEKIMEQME

Homology

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BLAST of CsGy1G012080 vs. NCBI nr
Match: XP_011653151.1 (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 451.8 bits (1161), Expect = 1.3e-123
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MKLLQSLKPINLIAFRREFVNFYSTVVKDSLYRRISPVGDPNISVTPLLDQWVLESGLVQ 60
           MKLLQSLKPINLIAFRREFVNFYSTVVKDSLYRRISPVGDPNISVTPLLDQWVLESGLVQ
Sbjct: 1   MKLLQSLKPINLIAFRREFVNFYSTVVKDSLYRRISPVGDPNISVTPLLDQWVLESGLVQ 60

Query: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIATRMNLILRVHGLEQVEDYF 120
           QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIATRMNLILRVHGLEQVEDYF
Sbjct: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIATRMNLILRVHGLEQVEDYF 120

Query: 121 NNMPSQLKRCQVHIALLNCYAHEKYADKANAVLQKIKEMGFAKTSLPYNITMNLYHQIGE 180
           NNMPSQLKRCQVHIALLNCYAHEKYADKANAVLQKIKEMGFAKTSLPYNITMNLYHQIGE
Sbjct: 121 NNMPSQLKRCQVHIALLNCYAHEKYADKANAVLQKIKEMGFAKTSLPYNITMNLYHQIGE 180

Query: 181 FERLDSPLKETDVDHDQFTYTTRLSAYATAFDFTGIEKIMEQME 225
           FERLDSPLKETDVDHDQFTYTTRLSAYATAFDFTGIEKIMEQME
Sbjct: 181 FERLDSPLKETDVDHDQFTYTTRLSAYATAFDFTGIEKIMEQME 224

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BLAST of CsGy1G012080 vs. NCBI nr
Match: XP_011653157.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis sativus] >KGN64672.1 hypothetical protein Csa_1G073790 [Cucumis sativus])

HSP 1 Score: 315.1 bits (806), Expect = 1.9e-82
Identity = 157/172 (91.28%), Postives = 161/172 (93.60%), Query Frame = 0


Query: 1   MKLLQSLKPINLIAFRREFVNFYSTVVKDSLYRRISPVGDPNISVTPLLDQWVLESGLVQ 60
           MKLLQSLKPINLIAFR EFVNFYSTVVKD+LYRRISPVGDPNISVTPLLDQWVLE  LVQ
Sbjct: 1   MKLLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQ 60

Query: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIATRMNLILRVHGLEQVEDYF 120
           QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIA RMNLILRVHGLEQVEDYF
Sbjct: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF 120

Query: 121 NNMPSQLKRCQVHIALLNCYAHEKYADKANAVLQKIKEMGFAKTSLPYNITM 173
           +NMPSQLKR QVHIALLNCYAHEK  DKANA +QKIKEMGFA + LPYNI M
Sbjct: 121 DNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMM 172

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BLAST of CsGy1G012080 vs. NCBI nr
Match: XP_008442448.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis melo])

HSP 1 Score: 297.0 bits (759), Expect = 5.5e-77
Identity = 149/181 (82.32%), Postives = 158/181 (87.29%), Query Frame = 0


Query: 1   MKLLQSLKPINLIAFRREFVNFYSTVVKDSLYRRISPVGDPNISVTPLLDQWVLESGLVQ 60
           MKLLQS+K INLIAFRRE VNFYST V D LYRR+SPVGDPNIS+ P+LDQWV E   VQ
Sbjct: 1   MKLLQSVKSINLIAFRRELVNFYSTFVNDDLYRRLSPVGDPNISIVPILDQWVSEGRPVQ 60

Query: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIATRMNLILRVHGLEQVEDYF 120
             ELR IIKELRVYKR+KHALE+SKWMSDK   PLSTADIATRMNLILRVHGLEQVEDYF
Sbjct: 61  IVELRLIIKELRVYKRYKHALEMSKWMSDKVCLPLSTADIATRMNLILRVHGLEQVEDYF 120

Query: 121 NNMPSQLKRCQVHIALLNCYAHEKYADKANAVLQKIKEMGFAKTSLPYNITMNLYHQIGE 180
           NNMPS+LKR QVHIALLNCYAHEK  DKANA+LQKIKE+GFA T  PYNI MNLYHQIGE
Sbjct: 121 NNMPSKLKRYQVHIALLNCYAHEKCVDKANALLQKIKELGFATTPHPYNIMMNLYHQIGE 180

Query: 181 F 182
           F
Sbjct: 181 F 181

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BLAST of CsGy1G012080 vs. NCBI nr
Match: XP_008442434.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis melo])

HSP 1 Score: 295.8 bits (756), Expect = 1.2e-76
Identity = 146/174 (83.91%), Postives = 157/174 (90.23%), Query Frame = 0


Query: 1   MKLLQSLKPINLIAFRREFVNFYSTVVKDSLYRRISPVGDPNISVTPLLDQWVLESGLVQ 60
           MKLLQS+KP NLIA RR  VNFYST VKD+LYRRISPVGDPNISV P+LDQWVLE  +VQ
Sbjct: 1   MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 60

Query: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIATRMNLILRVHGLEQVEDYF 120
           ++EL+ IIKELRVYKRFKHALEISKWMSDKRY PLST D+ATRMNLILRVHGLEQVEDYF
Sbjct: 61  KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 120

Query: 121 NNMPSQLKRCQVHIALLNCYAHEKYADKANAVLQKIKEMGFAKTSLPYNITMNL 175
           NNMPSQLKR  VHIALLNCYAHEK  DKANA LQKIKEMG+AK++LPYNI MNL
Sbjct: 121 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNL 174

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BLAST of CsGy1G012080 vs. NCBI nr
Match: XP_022140106.1 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Momordica charantia])

HSP 1 Score: 271.2 bits (692), Expect = 3.2e-69
Identity = 132/179 (73.74%), Postives = 151/179 (84.36%), Query Frame = 0


Query: 1   MKLLQSLKPINLIAFRREFVNFYSTVVKDSLYRRISPVGDPNISVTPLLDQWVLESGLVQ 60
           MKLL   K ++ +AFRR   +FYS + +DSLYRRISPVGDPN+SV P+LDQWV E   VQ
Sbjct: 1   MKLLVPGKQVHPVAFRRILGHFYSMIARDSLYRRISPVGDPNVSVIPVLDQWVREGRPVQ 60

Query: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIATRMNLILRVHGLEQVEDYF 120
           ++EL+ IIKELR+YKR KHALEISKWM DKRY PLS+ DIATRMNLILRVHGLEQVEDYF
Sbjct: 61  REELQKIIKELRIYKRSKHALEISKWMGDKRYLPLSSVDIATRMNLILRVHGLEQVEDYF 120

Query: 121 NNMPSQLKRCQVHIALLNCYAHEKYADKANAVLQKIKEMGFAKTSLPYNITMNLYHQIG 180
           N++PSQLK+ QVH+ALLNCYAHEK  DKANA+LQKIKEMGF    LPYNI MNLY+QIG
Sbjct: 121 NSIPSQLKKFQVHVALLNCYAHEKCVDKANAILQKIKEMGFDGAPLPYNIMMNLYYQIG 179

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BLAST of CsGy1G012080 vs. TAIR10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-41
Identity = 84/199 (42.21%), Postives = 125/199 (62.81%), Query Frame = 0


Query: 29  DSLYRRISPVGDPNISVTPLLDQWVLESGLVQQDELRHIIKELRVYKRFKHALEISKWMS 88
           D+L RR++  GDP+ S+  +LD W+ +  LV+  EL  IIK LR + RF HAL+IS WMS
Sbjct: 38  DTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMS 97

Query: 89  DKRYFPLSTADIATRMNLILRVHGLEQVEDYFNNMPSQLKRCQVHIALLNCYAHEKYADK 148
           + R   +S  D+A R++LI +V GL + E +F  +P + +   ++ ALLNCYA +K   K
Sbjct: 98  EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 157

Query: 149 ANAVLQKIKEMGFAKTSLPYNITMNLYHQIGEFERLDSPLKETD---VDHDQFTYTTRLS 208
           A  V Q++KE+GF K  LPYN+ +NLY + G++  ++  L+E +   V  D FT  TRL 
Sbjct: 158 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 217

Query: 209 AYATAFDFTGIEKIMEQME 225
           AY+   D  G+EK + + E
Sbjct: 218 AYSVVSDVEGMEKFLMRCE 236

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BLAST of CsGy1G012080 vs. TAIR10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 149.8 bits (377), Expect = 2.0e-36
Identity = 89/227 (39.21%), Postives = 127/227 (55.95%), Query Frame = 0


Query: 1   MKLLQSLKPINLIAFRREFVNFYSTVVKDSLYRRISPVGDPNISVTPLLDQWVLESGLVQ 60
           M +L+ + P NLIA R  + N    V K +LY +ISP+GDP  SV P L  WV     V 
Sbjct: 1   MNILRRI-PANLIASRYYYTN---RVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVS 60

Query: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIATRMNLILRVHGLEQVEDYF 120
             EL  I+ +LR  KRF HALE+SKWM++      S  + A  ++LI RV+G    E+YF
Sbjct: 61  VAELIRIVHDLRRRKRFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYF 120

Query: 121 NNMPSQLKRCQVHIALLNCYAHEKYADKANAVLQKIKEMGFAKTSLPYNITMNLYHQIGE 180
            N+  Q K  + + ALLNCY  ++  +K+    +K+KEMGF  +SL YN  M LY  IG+
Sbjct: 121 ENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQ 180

Query: 181 FERLDSPL---KETDVDHDQFTYTTRLSAYATAFDFTGIEKIMEQME 225
            E++   L   KE +V  D ++Y   ++A+   +D   I   +  ME
Sbjct: 181 HEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDME 223

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BLAST of CsGy1G012080 vs. TAIR10
Match: AT4G02820.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 127.1 bits (318), Expect = 1.4e-29
Identity = 73/206 (35.44%), Postives = 113/206 (54.85%), Query Frame = 0


Query: 18  EFVNFYSTVV--KDSLYRRISPVGDPNISVTPLLDQWVLESGLVQQDELRHIIKELRVYK 77
           E  N   TVV  +D+L  R+  +     S    + +W  E   V++ EL  I++ELR  K
Sbjct: 48  ESANKKETVVGGRDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIK 107

Query: 78  RFKHALEISKWMSDKRYFPLSTADIATRMNLILRVHGLEQVEDYFNNMPSQLKRCQVHIA 137
           R+KHALEI +WM  +    L   D A  ++LI ++ GL   E +F +MP Q++      +
Sbjct: 108 RYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTS 167

Query: 138 LLNCYAHEKYADKANAVLQKIKEMGFAKTSLPYNITMNLYHQIGEFERLDSPLKETDV-- 197
           LL+ Y   K +DKA A+ +K+ E GF K+ LPYN  +++Y   G+FE++   +KE  +  
Sbjct: 168 LLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRT 227

Query: 198 DHDQFTYTTRLSAYATAFDFTGIEKI 220
             D  TY   L+A+A+  D  G EK+
Sbjct: 228 SPDIVTYNLWLTAFASGNDVEGAEKV 253

[Close]

BLAST of CsGy1G012080 vs. TAIR10
Match: AT5G09450.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 125.2 bits (313), Expect = 5.2e-29
Identity = 71/200 (35.50%), Postives = 112/200 (56.00%), Query Frame = 0


Query: 28  KDSLYRRISPVGDPNISVTPLLDQWVLESGLVQQDELRHIIKELRVYKRFKHALEISKWM 87
           KD L  RI  +  P  S T +L++W+ E   +  +ELR I KELR  +R+KHALE+++WM
Sbjct: 54  KDDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWM 113

Query: 88  SDKRYFPLSTADIATRMNLILRVHGLEQVEDYFNNMPSQLKRCQVHIALLNCYAHEKYAD 147
                  +S AD A+R++LI +V G++  E YF  +    K  + + +LL+ YA  K  +
Sbjct: 114 VQHEESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTE 173

Query: 148 KANAVLQKIKEM-GFAKTSLPYNITMNLYHQIGEFERLD---SPLKETDVDHDQFTYTTR 207
           +A A+ ++I E       ++ YN  M LY  +G+ E++      LK+  V  D FTY   
Sbjct: 174 RAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLW 233

Query: 208 LSAYATAFDFTGIEKIMEQM 224
           LS+ A  F+   + KI+E+M
Sbjct: 234 LSSCAATFNIDELRKILEEM 253

[Close]

BLAST of CsGy1G012080 vs. TAIR10
Match: AT1G02370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 110.5 bits (275), Expect = 1.3e-24
Identity = 65/197 (32.99%), Postives = 111/197 (56.35%), Query Frame = 0


Query: 31  LYRRISPVGDPNISVTPLLDQWVLESGLVQQDELRHIIKELRVYKRFKHALEISKWMSDK 90
           LY+++S +     +V   L+Q+++E   V++D+L    K LR ++R +HA EI  WM +K
Sbjct: 73  LYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWM-EK 132

Query: 91  RYFPLSTADIATRMNLILRVHGLEQVEDYFNNM-PSQLKRCQVHIALLNCYAHEKYADKA 150
           R    S +D A  ++LI +  GLE  E+YFNN+ PS       + AL+NCY  E   +KA
Sbjct: 133 RKMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKA 192

Query: 151 NAVLQKIKEMGFAKTSLPYNITMNLYHQIGEFER---LDSPLKETDVDHDQFTYTTRLSA 210
            A  + + E+ F   SLP+N  M++Y ++ + E+   L   +K+  +     TY+  + +
Sbjct: 193 KAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQS 252

Query: 211 YATAFDFTGIEKIMEQM 224
             +  D  G+EKI+++M
Sbjct: 253 CGSLNDLDGLEKIIDEM 268

[Close]

BLAST of CsGy1G012080 vs. Swiss-Prot
Match: sp|Q9SKU6|PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.1e-40
Identity = 84/199 (42.21%), Postives = 125/199 (62.81%), Query Frame = 0


Query: 29  DSLYRRISPVGDPNISVTPLLDQWVLESGLVQQDELRHIIKELRVYKRFKHALEISKWMS 88
           D+L RR++  GDP+ S+  +LD W+ +  LV+  EL  IIK LR + RF HAL+IS WMS
Sbjct: 38  DTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMS 97

Query: 89  DKRYFPLSTADIATRMNLILRVHGLEQVEDYFNNMPSQLKRCQVHIALLNCYAHEKYADK 148
           + R   +S  D+A R++LI +V GL + E +F  +P + +   ++ ALLNCYA +K   K
Sbjct: 98  EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 157

Query: 149 ANAVLQKIKEMGFAKTSLPYNITMNLYHQIGEFERLDSPLKETD---VDHDQFTYTTRLS 208
           A  V Q++KE+GF K  LPYN+ +NLY + G++  ++  L+E +   V  D FT  TRL 
Sbjct: 158 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 217

Query: 209 AYATAFDFTGIEKIMEQME 225
           AY+   D  G+EK + + E
Sbjct: 218 AYSVVSDVEGMEKFLMRCE 236

[Close]

BLAST of CsGy1G012080 vs. Swiss-Prot
Match: sp|Q84JR3|PP334_ARATH (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.5e-35
Identity = 89/227 (39.21%), Postives = 127/227 (55.95%), Query Frame = 0


Query: 1   MKLLQSLKPINLIAFRREFVNFYSTVVKDSLYRRISPVGDPNISVTPLLDQWVLESGLVQ 60
           M +L+ + P NLIA R  + N    V K +LY +ISP+GDP  SV P L  WV     V 
Sbjct: 1   MNILRRI-PANLIASRYYYTN---RVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVS 60

Query: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIATRMNLILRVHGLEQVEDYF 120
             EL  I+ +LR  KRF HALE+SKWM++      S  + A  ++LI RV+G    E+YF
Sbjct: 61  VAELIRIVHDLRRRKRFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYF 120

Query: 121 NNMPSQLKRCQVHIALLNCYAHEKYADKANAVLQKIKEMGFAKTSLPYNITMNLYHQIGE 180
            N+  Q K  + + ALLNCY  ++  +K+    +K+KEMGF  +SL YN  M LY  IG+
Sbjct: 121 ENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQ 180

Query: 181 FERLDSPL---KETDVDHDQFTYTTRLSAYATAFDFTGIEKIMEQME 225
            E++   L   KE +V  D ++Y   ++A+   +D   I   +  ME
Sbjct: 181 HEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDME 223

[Close]

BLAST of CsGy1G012080 vs. Swiss-Prot
Match: sp|Q9SY07|PP302_ARATH (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.5e-28
Identity = 73/206 (35.44%), Postives = 113/206 (54.85%), Query Frame = 0


Query: 18  EFVNFYSTVV--KDSLYRRISPVGDPNISVTPLLDQWVLESGLVQQDELRHIIKELRVYK 77
           E  N   TVV  +D+L  R+  +     S    + +W  E   V++ EL  I++ELR  K
Sbjct: 48  ESANKKETVVGGRDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIK 107

Query: 78  RFKHALEISKWMSDKRYFPLSTADIATRMNLILRVHGLEQVEDYFNNMPSQLKRCQVHIA 137
           R+KHALEI +WM  +    L   D A  ++LI ++ GL   E +F +MP Q++      +
Sbjct: 108 RYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTS 167

Query: 138 LLNCYAHEKYADKANAVLQKIKEMGFAKTSLPYNITMNLYHQIGEFERLDSPLKETDV-- 197
           LL+ Y   K +DKA A+ +K+ E GF K+ LPYN  +++Y   G+FE++   +KE  +  
Sbjct: 168 LLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRT 227

Query: 198 DHDQFTYTTRLSAYATAFDFTGIEKI 220
             D  TY   L+A+A+  D  G EK+
Sbjct: 228 SPDIVTYNLWLTAFASGNDVEGAEKV 253

[Close]

BLAST of CsGy1G012080 vs. Swiss-Prot
Match: sp|Q94B59|PP372_ARATH (Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g09450 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 9.3e-28
Identity = 71/200 (35.50%), Postives = 112/200 (56.00%), Query Frame = 0


Query: 28  KDSLYRRISPVGDPNISVTPLLDQWVLESGLVQQDELRHIIKELRVYKRFKHALEISKWM 87
           KD L  RI  +  P  S T +L++W+ E   +  +ELR I KELR  +R+KHALE+++WM
Sbjct: 54  KDDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWM 113

Query: 88  SDKRYFPLSTADIATRMNLILRVHGLEQVEDYFNNMPSQLKRCQVHIALLNCYAHEKYAD 147
                  +S AD A+R++LI +V G++  E YF  +    K  + + +LL+ YA  K  +
Sbjct: 114 VQHEESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTE 173

Query: 148 KANAVLQKIKEM-GFAKTSLPYNITMNLYHQIGEFERLD---SPLKETDVDHDQFTYTTR 207
           +A A+ ++I E       ++ YN  M LY  +G+ E++      LK+  V  D FTY   
Sbjct: 174 RAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLW 233

Query: 208 LSAYATAFDFTGIEKIMEQM 224
           LS+ A  F+   + KI+E+M
Sbjct: 234 LSSCAATFNIDELRKILEEM 253

[Close]

BLAST of CsGy1G012080 vs. Swiss-Prot
Match: sp|Q9FZ24|PPR4_ARATH (Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g02370 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.4e-23
Identity = 65/197 (32.99%), Postives = 111/197 (56.35%), Query Frame = 0


Query: 31  LYRRISPVGDPNISVTPLLDQWVLESGLVQQDELRHIIKELRVYKRFKHALEISKWMSDK 90
           LY+++S +     +V   L+Q+++E   V++D+L    K LR ++R +HA EI  WM +K
Sbjct: 73  LYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWM-EK 132

Query: 91  RYFPLSTADIATRMNLILRVHGLEQVEDYFNNM-PSQLKRCQVHIALLNCYAHEKYADKA 150
           R    S +D A  ++LI +  GLE  E+YFNN+ PS       + AL+NCY  E   +KA
Sbjct: 133 RKMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKA 192

Query: 151 NAVLQKIKEMGFAKTSLPYNITMNLYHQIGEFER---LDSPLKETDVDHDQFTYTTRLSA 210
            A  + + E+ F   SLP+N  M++Y ++ + E+   L   +K+  +     TY+  + +
Sbjct: 193 KAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQS 252

Query: 211 YATAFDFTGIEKIMEQM 224
             +  D  G+EKI+++M
Sbjct: 253 CGSLNDLDGLEKIIDEM 268

[Close]

BLAST of CsGy1G012080 vs. TrEMBL
Match: tr|A0A0A0LV44|A0A0A0LV44_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073790 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.3e-82
Identity = 157/172 (91.28%), Postives = 161/172 (93.60%), Query Frame = 0


Query: 1   MKLLQSLKPINLIAFRREFVNFYSTVVKDSLYRRISPVGDPNISVTPLLDQWVLESGLVQ 60
           MKLLQSLKPINLIAFR EFVNFYSTVVKD+LYRRISPVGDPNISVTPLLDQWVLE  LVQ
Sbjct: 1   MKLLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQ 60

Query: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIATRMNLILRVHGLEQVEDYF 120
           QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIA RMNLILRVHGLEQVEDYF
Sbjct: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF 120

Query: 121 NNMPSQLKRCQVHIALLNCYAHEKYADKANAVLQKIKEMGFAKTSLPYNITM 173
           +NMPSQLKR QVHIALLNCYAHEK  DKANA +QKIKEMGFA + LPYNI M
Sbjct: 121 DNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMM 172

[Close]

BLAST of CsGy1G012080 vs. TrEMBL
Match: tr|A0A1S3B6G4|A0A1S3B6G4_CUCME (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103486307 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 3.6e-77
Identity = 149/181 (82.32%), Postives = 158/181 (87.29%), Query Frame = 0


Query: 1   MKLLQSLKPINLIAFRREFVNFYSTVVKDSLYRRISPVGDPNISVTPLLDQWVLESGLVQ 60
           MKLLQS+K INLIAFRRE VNFYST V D LYRR+SPVGDPNIS+ P+LDQWV E   VQ
Sbjct: 1   MKLLQSVKSINLIAFRRELVNFYSTFVNDDLYRRLSPVGDPNISIVPILDQWVSEGRPVQ 60

Query: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIATRMNLILRVHGLEQVEDYF 120
             ELR IIKELRVYKR+KHALE+SKWMSDK   PLSTADIATRMNLILRVHGLEQVEDYF
Sbjct: 61  IVELRLIIKELRVYKRYKHALEMSKWMSDKVCLPLSTADIATRMNLILRVHGLEQVEDYF 120

Query: 121 NNMPSQLKRCQVHIALLNCYAHEKYADKANAVLQKIKEMGFAKTSLPYNITMNLYHQIGE 180
           NNMPS+LKR QVHIALLNCYAHEK  DKANA+LQKIKE+GFA T  PYNI MNLYHQIGE
Sbjct: 121 NNMPSKLKRYQVHIALLNCYAHEKCVDKANALLQKIKELGFATTPHPYNIMMNLYHQIGE 180

Query: 181 F 182
           F
Sbjct: 181 F 181

[Close]

BLAST of CsGy1G012080 vs. TrEMBL
Match: tr|A0A1S3B572|A0A1S3B572_CUCME (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103486303 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 8.1e-77
Identity = 146/174 (83.91%), Postives = 157/174 (90.23%), Query Frame = 0


Query: 1   MKLLQSLKPINLIAFRREFVNFYSTVVKDSLYRRISPVGDPNISVTPLLDQWVLESGLVQ 60
           MKLLQS+KP NLIA RR  VNFYST VKD+LYRRISPVGDPNISV P+LDQWVLE  +VQ
Sbjct: 1   MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 60

Query: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIATRMNLILRVHGLEQVEDYF 120
           ++EL+ IIKELRVYKRFKHALEISKWMSDKRY PLST D+ATRMNLILRVHGLEQVEDYF
Sbjct: 61  KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 120

Query: 121 NNMPSQLKRCQVHIALLNCYAHEKYADKANAVLQKIKEMGFAKTSLPYNITMNL 175
           NNMPSQLKR  VHIALLNCYAHEK  DKANA LQKIKEMG+AK++LPYNI MNL
Sbjct: 121 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNL 174

[Close]

BLAST of CsGy1G012080 vs. TrEMBL
Match: tr|A0A0A0LSC2|A0A0A0LSC2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073800 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.3e-61
Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 87  MSDKRYFPLSTADIATRMNLILRVHGLEQVEDYFNNMPSQLKRCQVHIALLNCYAHEKYA 146
           MSDKRYFPLSTADIATRMNLILRVHGLEQVEDYFNNMPSQLKRCQVHIALLNCYAHEKYA
Sbjct: 1   MSDKRYFPLSTADIATRMNLILRVHGLEQVEDYFNNMPSQLKRCQVHIALLNCYAHEKYA 60

Query: 147 DKANAVLQKIKEMGFAKTSLPYNITMNLYHQIGEFERLDSPLKETDVDHDQFTYTTRLS 206
           DKANAVLQKIKEMGFAKTSLPYNITMNLYHQIGEFERLDSPLKETDVDHDQFTYTTRL+
Sbjct: 61  DKANAVLQKIKEMGFAKTSLPYNITMNLYHQIGEFERLDSPLKETDVDHDQFTYTTRLN 119

[Close]

BLAST of CsGy1G012080 vs. TrEMBL
Match: tr|A0A2R6QLF3|A0A2R6QLF3_ACTCH (Pentatricopeptide repeat-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc17334 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 4.8e-61
Identity = 118/199 (59.30%), Postives = 157/199 (78.89%), Query Frame = 0


Query: 29  DSLYRRISPVGDPNISVTPLLDQWVLESGLVQQDELRHIIKELRVYKRFKHALEISKWMS 88
           +SLYRRISPVGDP +S+ P+LDQWV E   + +++L+ II+EL+VYKRFKHALE+S WM+
Sbjct: 30  NSLYRRISPVGDPRVSIVPVLDQWVREGRPIGREQLQSIIRELKVYKRFKHALEVSYWMT 89

Query: 89  DKRYFPLSTADIATRMNLILRVHGLEQVEDYFNN-MPSQLKRCQVHIALLNCYAHEKYAD 148
           D+RY P S AD+ATRMNLILRVHGLEQVE YFNN +P +L+  +V+ ALLNCYAHEK   
Sbjct: 90  DRRYIPPSIADLATRMNLILRVHGLEQVESYFNNFIPHRLRGFEVYTALLNCYAHEKSVQ 149

Query: 149 KANAVLQKIKEMGFAKTSLPYNITMNLYHQIGEFERLDSPLKETDVD--HDQFTYTTRLS 208
           KA +V+Q++++M FAKT L YNI MNLY+QIG  E+LD+ + E +    +D++T+T RLS
Sbjct: 150 KAESVMQELRDMEFAKTPLSYNILMNLYYQIGNIEKLDALMHEMEEKGCYDRYTFTIRLS 209

Query: 209 AYATAFDFTGIEKIMEQME 225
           AYA + D  GI+ I+ +ME
Sbjct: 210 AYAASSDSKGIDNIVARME 228

The following BLAST results are available for this feature:

BLAST of CsGy1G012080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653151.1	1.3e-123	100.00	PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g...	[more]
XP_011653157.1	1.9e-82	91.28	PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-...	[more]
XP_008442448.1	5.5e-77	82.32	PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-...	[more]
XP_008442434.1	1.2e-76	83.91	PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-...	[more]
XP_022140106.1	3.2e-69	73.74	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Momor...	[more]

BLAST of CsGy1G012080 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20710.1	1.2e-41	42.21	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21705.1	2.0e-36	39.21	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G02820.1	1.4e-29	35.44	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G09450.1	5.2e-29	35.50	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G02370.1	1.3e-24	32.99	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of CsGy1G012080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SKU6\|PP166_ARATH	2.1e-40	42.21	Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop...	[more]
sp\|Q84JR3\|PP334_ARATH	3.5e-35	39.21	Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop...	[more]
sp\|Q9SY07\|PP302_ARATH	2.5e-28	35.44	Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop...	[more]
sp\|Q94B59\|PP372_ARATH	9.3e-28	35.50	Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidop...	[more]
sp\|Q9FZ24\|PPR4_ARATH	2.4e-23	32.99	Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidop...	[more]

BLAST of CsGy1G012080 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LV44\|A0A0A0LV44_CUCSA	1.3e-82	91.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073790 PE=4 SV=1	[more]
tr\|A0A1S3B6G4\|A0A1S3B6G4_CUCME	3.6e-77	82.32	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cuc...	[more]
tr\|A0A1S3B572\|A0A1S3B572_CUCME	8.1e-77	83.91	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cuc...	[more]
tr\|A0A0A0LSC2\|A0A0A0LSC2_CUCSA	1.3e-61	99.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073800 PE=4 SV=1	[more]
tr\|A0A2R6QLF3\|A0A2R6QLF3_ACTCH	4.8e-61	59.30	Pentatricopeptide repeat-containing protein OS=Actinidia chinensis var. chinensi...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G012080.1	CsGy1G012080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 61..224 e-value: 7.2E-13 score: 50.6
None	No IPR available	PANTHER	PTHR24015:SF1625	SUBFAMILY NOT NAMED	coord: 29..222
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 29..222

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsGy1G012080	CsGy7G004160	Cucumber (Gy14) v2	cgybcgybB041

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G012080	Cucumber (Gy14) v2	cgybcgybB025
CsGy1G012080	Cucumber (Gy14) v2	cgybcgybB035
CsGy1G012080	Cucurbita maxima (Rimu)	cgybcmaB002
CsGy1G012080	Cucurbita maxima (Rimu)	cgybcmaB074
CsGy1G012080	Cucurbita maxima (Rimu)	cgybcmaB086
CsGy1G012080	Cucurbita maxima (Rimu)	cgybcmaB108
CsGy1G012080	Cucurbita maxima (Rimu)	cgybcmaB142
CsGy1G012080	Cucurbita moschata (Rifu)	cgybcmoB003
CsGy1G012080	Cucurbita moschata (Rifu)	cgybcmoB068
CsGy1G012080	Cucurbita moschata (Rifu)	cgybcmoB082
CsGy1G012080	Cucurbita moschata (Rifu)	cgybcmoB101
CsGy1G012080	Cucurbita moschata (Rifu)	cgybcmoB133
CsGy1G012080	Cucurbita pepo (Zucchini)	cgybcpeB018
CsGy1G012080	Cucurbita pepo (Zucchini)	cgybcpeB066
CsGy1G012080	Cucurbita pepo (Zucchini)	cgybcpeB070
CsGy1G012080	Cucurbita pepo (Zucchini)	cgybcpeB102
CsGy1G012080	Cucurbita pepo (Zucchini)	cgybcpeB140
CsGy1G012080	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G012080	Cucumber (Chinese Long) v2	cgybcuB031
CsGy1G012080	Cucumber (Chinese Long) v2	cgybcuB040
CsGy1G012080	Bottle gourd (USVL1VR-Ls)	cgyblsiB015
CsGy1G012080	Bottle gourd (USVL1VR-Ls)	cgyblsiB018
CsGy1G012080	Bottle gourd (USVL1VR-Ls)	cgyblsiB046
CsGy1G012080	Melon (DHL92) v3.5.1	cgybmeB022
CsGy1G012080	Melon (DHL92) v3.5.1	cgybmeB076
CsGy1G012080	Melon (DHL92) v3.6.1	cgybmedB020
CsGy1G012080	Melon (DHL92) v3.6.1	cgybmedB072
CsGy1G012080	Watermelon (Charleston Gray)	cgybwcgB010
CsGy1G012080	Watermelon (Charleston Gray)	cgybwcgB013
CsGy1G012080	Watermelon (Charleston Gray)	cgybwcgB033
CsGy1G012080	Watermelon (97103) v1	cgybwmB010
CsGy1G012080	Watermelon (97103) v1	cgybwmB044
CsGy1G012080	Watermelon (97103) v1	cgybwmB077
CsGy1G012080	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G012080	Wild cucumber (PI 183967)	cgybcpiB028
CsGy1G012080	Wild cucumber (PI 183967)	cgybcpiB037
CsGy1G012080	Wild cucumber (PI 183967)	cgybcpiB044
CsGy1G012080	Silver-seed gourd	carcgybB0161
CsGy1G012080	Silver-seed gourd	carcgybB0181
CsGy1G012080	Silver-seed gourd	carcgybB0638
CsGy1G012080	Silver-seed gourd	carcgybB0936
CsGy1G012080	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G012080	Cucumber (Chinese Long) v3	cgybcucB034
CsGy1G012080	Cucumber (Chinese Long) v3	cgybcucB045
CsGy1G012080	Watermelon (97103) v2	cgybwmbB002
CsGy1G012080	Watermelon (97103) v2	cgybwmbB024
CsGy1G012080	Watermelon (97103) v2	cgybwmbB032
CsGy1G012080	Wax gourd	cgybwgoB020
CsGy1G012080	Wax gourd	cgybwgoB035
CsGy1G012080	Wax gourd	cgybwgoB070