CsGy1G011860 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTGCGCAATGACAGTCATGTGCCGCTACCGTTGGTGGATTTGGATTTTAATGATACAGATGAACGAAGGAGATGAAAATGCTCAAATAAAGAGTAATCTTGGGGTTAAGTATCGGCAAGTTGGGTCCCGACTAGCCGTACGCCATTGCTGTTTTTCGGTGGAGCTTACCAGGCCGCCAGGTTAGGGAATTAATTGTGACCACACCTTTTTAAGAATTTTATTTGGAATAGCCCTACATTATCCATTGATTTCCTTTTGAATTGGTCTACTATATGATATTTATTTACATATATTTAGAAGTAAGATTTGAATTTCTAGTTAAATTGTAAGAACAAATTAAAATATTTTTTAGATATGGCTTTATTTTTTAAAATATGAGTAGAAAAGGAACAAATAAAATAGAAAAATAACACTTATGAATAGAAGTAGTGTTGTGAAGGTTATTTATGAAATACTAATTAGTGAAATAATTATTGAACAAGTAAAAACTTCAAAAGTTAAATGTACCTTCTAAAAGAGAGAGTTTTATATGTTTCACCCAATATGTGAAAACTAACATCTTTTTTAAAAATAAGTTTTCCCAACCTCACATTTACTTCTTAAATATTTTTAAAAAACATGATGTATCCATCTTGCATGCCTTTCATCTTAGCTAAAAGATATTATTTTTTTGTGTGATGGATAGATGAGTAACATTTTAGATAGGTGCATCCTTAAATTTTTGTGAACCTTAAGTGATATTACAAAATTATTATGTTGTACAATTTTGTATGTTGTACTAAACGGGAGCCTGAGCTGTAGAAAACATTCCACACGGTCCGGTTCACCAGTGGTGCAGCAACAATGAGCAACCCAACGGCGAGAACATTGGGAAACTTCTACTCCGCCACAAGAGACCCAATCTTCTGCGCCCATCACTCCAGCGTCGACCGCATTTGGTCCACTTGGAAAACCTTCGGCGGGAAACGAAAAGACATTCAAAACCCCAACTATCTCAAATGCTTCTTTCCTCTTCTACAACGAGAAAGCGGAAGCTGTCCAAGTCTACGTCCGTGACTCTCTAAACACCAAAACCCTCAGCTACGTCTTCCAAGATGTAAACATCCCTTGGCTCAAAGCTCGCCCCATTCCTCGTAAAACACTAAAGTCAAAGAAACCCCGTGCCACCACTGCCAGCATTTTCCCCTTCCACGGCGTTCGACCAGCAATCGCCGAGCCAGTCCCCGTGACATTCCCCCTGACTCTTTGACAAAATTGTCAGCGTCGAAGTGAAGAGGCTGAGGAAATCGAGGGACAAGAAGGAGAAAGGAGGAGGTACTGGTGGTTGATGGGATTGAATATGATCAGACTAACAAGGCTGTAA ATGAATTGCGCAATGACAGTCATGTGCCGCTACCGTTGGTGGATTTGGATTTTAATGATACAGATGAACGAAGGAGATGAAAATGCTCAAATAAAGAGTAATCTTGGGGTTAAGTATCGGCAAGTTGGGTCCCGACTAGCCGTACGCCATTGCTGTTTTTCGGTGGAGCTTACCAGGCCGCCAGCAACCCAACGGCGAGAACATTGGGAAACTTCTACTCCGCCACAAGAGACCCAATCTTCTGCGCCCATCACTCCAGCGTCGACCGCATTTGGTCCACTTGGAAAACCTTCGGCGGGAAACGAAAAGACATTCAAAACCCCAACTATCTCAAATGCTTCTTTCCTCTTCTACAACGAGAAAGCGGAAGCTGTCCAAGTCTACGTCCGTGACTCTCTAAACACCAAAACCCTCAGCTACGTCTTCCAAGATGTAAACATCCCTTGGCTCAAAGCTCGCCCCATTCCTCGTAAAACACTAAAGTCAAAGAAACCCCGTGCCACCACTGCCAGCATTTTCCCCTTCCACGGCGTTCGACCAGCAATCGCCGAGCCAGTCCCCCGTCGAAGTGAAGAGGCTGAGGAAATCGAGGGACAAGAAGGAGAAAGGAGGAGGTACTGGTGGTTGATGGGATTGAATATGATCAGACTAACAAGGCTGTAA ATGAATTGCGCAATGACAGTCATGTGCCGCTACCGTTGGTGGATTTGGATTTTAATGATACAGATGAACGAAGGAGATGAAAATGCTCAAATAAAGAGTAATCTTGGGGTTAAGTATCGGCAAGTTGGGTCCCGACTAGCCGTACGCCATTGCTGTTTTTCGGTGGAGCTTACCAGGCCGCCAGCAACCCAACGGCGAGAACATTGGGAAACTTCTACTCCGCCACAAGAGACCCAATCTTCTGCGCCCATCACTCCAGCGTCGACCGCATTTGGTCCACTTGGAAAACCTTCGGCGGGAAACGAAAAGACATTCAAAACCCCAACTATCTCAAATGCTTCTTTCCTCTTCTACAACGAGAAAGCGGAAGCTGTCCAAGTCTACGTCCGTGACTCTCTAAACACCAAAACCCTCAGCTACGTCTTCCAAGATGTAAACATCCCTTGGCTCAAAGCTCGCCCCATTCCTCGTAAAACACTAAAGTCAAAGAAACCCCGTGCCACCACTGCCAGCATTTTCCCCTTCCACGGCGTTCGACCAGCAATCGCCGAGCCAGTCCCCCGTCGAAGTGAAGAGGCTGAGGAAATCGAGGGACAAGAAGGAGAAAGGAGGAGGTACTGGTGGTTGATGGGATTGAATATGATCAGACTAACAAGGCTGTAA MNCAMTVMCRYRWWIWILMIQMNEGDENAQIKSNLGVKYRQVGSRLAVRHCCFSVELTRPPATQRREHWETSTPPQETQSSAPITPASTAFGPLGKPSAGNEKTFKTPTISNASFLFYNEKAEAVQVYVRDSLNTKTLSYVFQDVNIPWLKARPIPRKTLKSKKPRATTASIFPFHGVRPAIAEPVPRRSEEAEEIEGQEGERRRYWWLMGLNMIRLTRL
BLAST of CsGy1G011860 vs. NCBI nr
Match: KGN64654.1 (hypothetical protein Csa_1G073620 [Cucumis sativus]) HSP 1 Score: 439.1 bits (1128), Expect = 8.8e-120 Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0
BLAST of CsGy1G011860 vs. NCBI nr
Match: KGN64653.1 (hypothetical protein Csa_1G073610 [Cucumis sativus]) HSP 1 Score: 105.9 bits (263), Expect = 1.8e-19 Identity = 67/123 (54.47%), Postives = 78/123 (63.41%), Query Frame = 0
BLAST of CsGy1G011860 vs. NCBI nr
Match: AKN08990.1 (polyphenol oxidase [Luffa aegyptiaca]) HSP 1 Score: 94.7 bits (234), Expect = 4.1e-16 Identity = 51/98 (52.04%), Postives = 63/98 (64.29%), Query Frame = 0
BLAST of CsGy1G011860 vs. NCBI nr
Match: XP_022139865.1 (polyphenol oxidase, chloroplastic-like [Momordica charantia]) HSP 1 Score: 93.2 bits (230), Expect = 1.2e-15 Identity = 46/88 (52.27%), Postives = 64/88 (72.73%), Query Frame = 0
BLAST of CsGy1G011860 vs. NCBI nr
Match: XP_023001713.1 (polyphenol oxidase, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 80.9 bits (198), Expect = 6.1e-12 Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = 0
BLAST of CsGy1G011860 vs. Swiss-Prot
Match: sp|Q9FRX6|AS1_ANTMA (Aureusidin synthase OS=Antirrhinum majus OX=4151 GN=AS1 PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.3e-10 Identity = 52/124 (41.94%), Postives = 67/124 (54.03%), Query Frame = 0
BLAST of CsGy1G011860 vs. Swiss-Prot
Match: sp|P43309|PPO_MALDO (Polyphenol oxidase, chloroplastic OS=Malus domestica OX=3750 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.0e-10 Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 0
BLAST of CsGy1G011860 vs. Swiss-Prot
Match: sp|Q6UIL3|LAHY_LARTR ((+)-larreatricin hydroxylase, chloroplastic OS=Larrea tridentata OX=66636 PE=1 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 9.5e-09 Identity = 26/56 (46.43%), Postives = 40/56 (71.43%), Query Frame = 0
BLAST of CsGy1G011860 vs. Swiss-Prot
Match: sp|O81103|PPO_PRUAR (Polyphenol oxidase latent form, chloroplastic OS=Prunus armeniaca OX=36596 GN=PPO PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.1e-08 Identity = 41/112 (36.61%), Postives = 57/112 (50.89%), Query Frame = 0
BLAST of CsGy1G011860 vs. Swiss-Prot
Match: sp|Q06215|PPO_VICFA (Polyphenol oxidase A1, chloroplastic OS=Vicia faba OX=3906 PE=1 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 4.7e-08 Identity = 29/68 (42.65%), Postives = 39/68 (57.35%), Query Frame = 0
BLAST of CsGy1G011860 vs. TrEMBL
Match: tr|A0A0A0LUI6|A0A0A0LUI6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073620 PE=4 SV=1) HSP 1 Score: 439.1 bits (1128), Expect = 5.8e-120 Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0
BLAST of CsGy1G011860 vs. TrEMBL
Match: tr|A0A0A0LSA5|A0A0A0LSA5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073610 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 1.2e-19 Identity = 67/123 (54.47%), Postives = 78/123 (63.41%), Query Frame = 0
BLAST of CsGy1G011860 vs. TrEMBL
Match: tr|A0A0U2D7M5|A0A0U2D7M5_LUFAE (Polyphenol oxidase OS=Luffa aegyptiaca OX=3670 PE=2 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 2.7e-16 Identity = 51/98 (52.04%), Postives = 63/98 (64.29%), Query Frame = 0
BLAST of CsGy1G011860 vs. TrEMBL
Match: tr|A0A2P5CT40|A0A2P5CT40_9ROSA (Polyphenol oxidase OS=Trema orientalis OX=63057 GN=TorRG33x02_273880 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 4.0e-12 Identity = 39/78 (50.00%), Postives = 52/78 (66.67%), Query Frame = 0
BLAST of CsGy1G011860 vs. TrEMBL
Match: tr|A0A2P5BPK0|A0A2P5BPK0_PARAD (Polyphenol oxidase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_221090 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 4.0e-12 Identity = 39/78 (50.00%), Postives = 52/78 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |