CsGy1G011810 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGATTTTTCGACCGCAGGACGAGATCCATTGTTTTACGCTCATCACGTGAATGTCGATCGCATGTGGAAGATTTGGAAAGAAATGGGGAATCAAGATCACACCGACGAGGGTTGGGTAAACTCGACATTTGTGTTTTACGATGAGAATCAAAACGCTGTACGTATCAAAGTTTCGGATTGTTTGGACAGTAAGAAACTTGGGTATGATTATGAAAAGGTACCCATTTCATGGAAGCATTTGAAGAAAACCCCGTTACCAAATAATAATTGTATAATTAATAGAGAATTATTCCAGCTGCCTCCAATGAAGCAAAGTTTCCTGTGAAGATGAAACCTAAGCTTGGTGGAGAAAGCGTCAGCATTGGAGGGATAACGGTTCAGCTTCAGCCTGTGTAA ATGGGAGATTTTTCGACCGCAGGACGAGATCCATTGTTTTACGCTCATCACGTGAATGTCGATCGCATGTGGAAGATTTGGAAAGAAATGGGGAATCAAGATCACACCGACGAGGGTTGGGTAAACTCGACATTTGTGTTTTACGATGAGAATCAAAACGCTGTACGTATCAAAGTTTCGGATTGTTTGGACAGTAAGAAACTTGGGTATGATTATGAAAAGAGAATTATTCCAGCTGCCTCCAATGAAGCAAAGTTTCCTGTGAAGATGAAACCTAAGCTTGGTGGAGAAAGCGTCAGCATTGGAGGGATAACGGTTCAGCTTCAGCCTGTGTAA ATGGGAGATTTTTCGACCGCAGGACGAGATCCATTGTTTTACGCTCATCACGTGAATGTCGATCGCATGTGGAAGATTTGGAAAGAAATGGGGAATCAAGATCACACCGACGAGGGTTGGGTAAACTCGACATTTGTGTTTTACGATGAGAATCAAAACGCTGTACGTATCAAAGTTTCGGATTGTTTGGACAGTAAGAAACTTGGGTATGATTATGAAAAGAGAATTATTCCAGCTGCCTCCAATGAAGCAAAGTTTCCTGTGAAGATGAAACCTAAGCTTGGTGGAGAAAGCGTCAGCATTGGAGGGATAACGGTTCAGCTTCAGCCTGTGTAA MGDFSTAGRDPLFYAHHVNVDRMWKIWKEMGNQDHTDEGWVNSTFVFYDENQNAVRIKVSDCLDSKKLGYDYEKRIIPAASNEAKFPVKMKPKLGGESVSIGGITVQLQPV
BLAST of CsGy1G011810 vs. NCBI nr
Match: XP_011648445.1 (PREDICTED: polyphenol oxidase, chloroplastic-like [Cucumis sativus]) HSP 1 Score: 233.8 bits (595), Expect = 2.8e-58 Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 0
BLAST of CsGy1G011810 vs. NCBI nr
Match: KGN64650.1 (hypothetical protein Csa_1G073100 [Cucumis sativus]) HSP 1 Score: 219.2 bits (557), Expect = 7.2e-54 Identity = 102/104 (98.08%), Postives = 102/104 (98.08%), Query Frame = 0
BLAST of CsGy1G011810 vs. NCBI nr
Match: XP_017978714.1 (PREDICTED: polyphenol oxidase, chloroplastic [Theobroma cacao]) HSP 1 Score: 121.7 bits (304), Expect = 1.6e-24 Identity = 51/80 (63.75%), Postives = 64/80 (80.00%), Query Frame = 0
BLAST of CsGy1G011810 vs. NCBI nr
Match: XP_021294109.1 (polyphenol oxidase, chloroplastic-like [Herrania umbratica]) HSP 1 Score: 121.7 bits (304), Expect = 1.6e-24 Identity = 51/80 (63.75%), Postives = 65/80 (81.25%), Query Frame = 0
BLAST of CsGy1G011810 vs. NCBI nr
Match: XP_015956318.1 (polyphenol oxidase A1, chloroplastic [Arachis duranensis] >XP_025690059.1 polyphenol oxidase A1, chloroplastic-like [Arachis hypogaea]) HSP 1 Score: 120.2 bits (300), Expect = 4.6e-24 Identity = 52/85 (61.18%), Postives = 62/85 (72.94%), Query Frame = 0
BLAST of CsGy1G011810 vs. Swiss-Prot
Match: sp|P43311|PPO_VITVI (Polyphenol oxidase, chloroplastic OS=Vitis vinifera OX=29760 PE=1 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 1.8e-24 Identity = 51/103 (49.51%), Postives = 66/103 (64.08%), Query Frame = 0
BLAST of CsGy1G011810 vs. Swiss-Prot
Match: sp|Q9MB14|PPO2_IPOBA (Polyphenol oxidase II, chloroplastic OS=Ipomoea batatas OX=4120 GN=co-2 PE=2 SV=2) HSP 1 Score: 111.7 bits (278), Expect = 5.3e-24 Identity = 52/102 (50.98%), Postives = 68/102 (66.67%), Query Frame = 0
BLAST of CsGy1G011810 vs. Swiss-Prot
Match: sp|Q08307|PPOE_SOLLC (Polyphenol oxidase E, chloroplastic OS=Solanum lycopersicum OX=4081 PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 2.6e-23 Identity = 46/74 (62.16%), Postives = 57/74 (77.03%), Query Frame = 0
BLAST of CsGy1G011810 vs. Swiss-Prot
Match: sp|P43309|PPO_MALDO (Polyphenol oxidase, chloroplastic OS=Malus domestica OX=3750 PE=2 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.0e-22 Identity = 47/85 (55.29%), Postives = 63/85 (74.12%), Query Frame = 0
BLAST of CsGy1G011810 vs. Swiss-Prot
Match: sp|Q9ZP19|PPO1_IPOBA (Polyphenol oxidase I, chloroplastic OS=Ipomoea batatas OX=4120 GN=co-1 PE=1 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.3e-22 Identity = 51/115 (44.35%), Postives = 72/115 (62.61%), Query Frame = 0
BLAST of CsGy1G011810 vs. TrEMBL
Match: tr|A0A0A0LRV2|A0A0A0LRV2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073100 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 4.8e-54 Identity = 102/104 (98.08%), Postives = 102/104 (98.08%), Query Frame = 0
BLAST of CsGy1G011810 vs. TrEMBL
Match: tr|A0A061GMJ6|A0A061GMJ6_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_029922 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 3.9e-24 Identity = 50/80 (62.50%), Postives = 64/80 (80.00%), Query Frame = 0
BLAST of CsGy1G011810 vs. TrEMBL
Match: tr|A0A1U8HXV2|A0A1U8HXV2_GOSHI (polyphenol oxidase, chloroplastic-like OS=Gossypium hirsutum OX=3635 GN=LOC107888998 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 6.7e-24 Identity = 50/80 (62.50%), Postives = 63/80 (78.75%), Query Frame = 0
BLAST of CsGy1G011810 vs. TrEMBL
Match: tr|A0A2P5CT50|A0A2P5CT50_9ROSA (Polyphenol oxidase OS=Trema orientalis OX=63057 GN=TorRG33x02_273860 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 8.8e-24 Identity = 50/80 (62.50%), Postives = 62/80 (77.50%), Query Frame = 0
BLAST of CsGy1G011810 vs. TrEMBL
Match: tr|A0A1S3BFJ5|A0A1S3BFJ5_CUCME (polyphenol oxidase I, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103489300 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.1e-23 Identity = 52/80 (65.00%), Postives = 66/80 (82.50%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |