CsGy1G010400 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGAGAAAGAAAGGGAAGCGAAGCCCACGTGAATTGTTCACTCAACAACACAAAGGTCTAGTTGAAGATGGAGAAAAATGGATGAAGAAAACAGCAAATTCATGTATGTTGGTTGCAACTCTCATCACCACCGTAGTTTTCGCTGCAATCTTCACCGTACCAGGTGGATACACCAACACCACCAGCACCACAGGGAGCGTCATCGAGAACAACAACAACACAGGCACTCCTCTATTTCTTTACCACAAATGGTTCACTGTTTTTGTGATATCAGATGCAACAGCTTTGATCTCATCTTCAACTGCCATACTATTGTTTTTGTCAATCCTCACATCACGTTGTGCAGAAGAAGATTTCCTTCTATGGCTCCCATTAAAGTTGGTATTTGGACTTGGAACTCTCTTCTTATCAGTAGTTACAATGGTATTGGCCTTTAGTGCCACATTTTTTTTGTTCTATGGCAAAGATACGGCTTGGGTCCCATTGCTTGTTGCTGGTATGGCTATTGTTCCTGTTTATTGTTTCGGTGTATTGCAGTTTAGGCTTTGGGCTGATGCAATAGCAGCTTTAAGGGCTACTTACTTCTTGTATTTTAGGGATGGGATAGTTGCAAATTTATCAACTATATTTAAAATAATTAACTATATAGCAACTTTTTAAAAAATTTGCAAATATAGCTGTCAAATTCTATCAATAATATAAGTCTATCACCGATAGACCATGTTGCAAATATCGGTCTATCACTGATAAACCATACGAAGTCTATCAGCGATACAAGTCTACCAGTGATAATCTTGCTATATTTGCACTTTTTTAAAAATATTGTTATATCCTTAATTACTATTCCTAAAATGTTCATCAATTACAATTTCCCTTTAGGGATTTTAAGCCCATATTATTGTTTTGATAGCTCTCAATCATTTGTTCTTTTCAAGAAAAAATAAATTATTATTACGTGGAACCAAATAACCATTGATTGGAATCTCCATTCTAGGAGACCCCTTCGTAGCTGTGAATTAACCAGGTGGATGAGCTTAATTCCACATTACTTACTCCTACATTTGTTGTAAATGGTCATGATTTGCCGACCTGGAAACTAAACACACAAGGGACTTTCAATATAGCCTTAGTAAAATCCGCCATCCACACAAGTGATAGTAGAGGGCGAAATTCTTTTGCTCCATAAACTTTTAGAAACTTGTGGAGATCCAGTATAACAAAAAAATGCAAGTTCTTCATATGGTCCCTTGTACATGAATGCATTAACATGGCTGACAATCTTCAAAAGAGGCTCCCTAACACGAATCTAAGACCAAACTGATGTGTTATGTGCAGAAAAAATGAAGAAAACAAACACCATCTCTTCCTACACTGCTCATATGCCGCTGCCATATGGGATAAATTAAGATTGATGCTTAATTGGAACTCCACACACTCCCGAACCTCCTCACTGTGCATTGATGTTAGTAAATTAAAACAAAAGAACAAAAAGATGATCATTTTATTCAACTTTGTGGTAATAGTTCTATGAAACATTTGGTTGGAAAGAAACAACAGAACGTTCAACGACAAAGAGAAGCGGCCAATTGATTTATGGGAAGATATTAAAGCTCTGGCGGGACTTTGGACTTGTAGATCCAAACACTTCTTAAATTATTCTCAGAGTTCTACTGCGCTTAATTTAAAAACAATAATAAATTATTGTTATTCGTGAAGTAGGTAGGAATGTACATTAAAATTCCATAATTATGAATTTAATTTGAATTATGATCCTAATCAAAATTCATTATTGATTGATACGTGTGTGGTCACATGATGATCACAAGATCCTATGCGTGTATATAATTTACTTTATTAAGAATAAAACATGCCTAATTGGTCTAAAATTTGAGTCTTTATTGTCTATAAATAAAATTGTAAATTTGGAACAACAAATTTTAAAATATGAAGAATTAGACGGATGTAACATAAATTTTTAAAATCAGAGAATATGCAAAAAAAAAAAAAAAAAAAAAAGATACCCGATTCAAATTTGATTTTTTTTTTCTTTTAACAAGATATTAGAAGAAAAGAGGAGTGAAGGGTGTGTTTGA ATGAGGAGAAAGAAAGGGAAGCGAAGCCCACGTGAATTGTTCACTCAACAACACAAAGGTCTAGTTGAAGATGGAGAAAAATGGATGAAGAAAACAGCAAATTCATGTATGTTGGTTGCAACTCTCATCACCACCGTAGTTTTCGCTGCAATCTTCACCGTACCAGGTGGATACACCAACACCACCAGCACCACAGGGAGCATATTAGAAGAAAAGAGGAGTGAAGGGTGTGTTTGA ATGAGGAGAAAGAAAGGGAAGCGAAGCCCACGTGAATTGTTCACTCAACAACACAAAGGTCTAGTTGAAGATGGAGAAAAATGGATGAAGAAAACAGCAAATTCATGTATGTTGGTTGCAACTCTCATCACCACCGTAGTTTTCGCTGCAATCTTCACCGTACCAGGTGGATACACCAACACCACCAGCACCACAGGGAGCATATTAGAAGAAAAGAGGAGTGAAGGGTGTGTTTGA MRRKKGKRSPRELFTQQHKGLVEDGEKWMKKTANSCMLVATLITTVVFAAIFTVPGGYTNTTSTTGSILEEKRSEGCV
BLAST of CsGy1G010400 vs. NCBI nr
Match: XP_022954801.1 (ankyrin repeat-containing protein ITN1-like [Cucurbita moschata]) HSP 1 Score: 103.6 bits (257), Expect = 3.1e-19 Identity = 55/70 (78.57%), Postives = 60/70 (85.71%), Query Frame = 0
BLAST of CsGy1G010400 vs. NCBI nr
Match: XP_022994352.1 (ankyrin repeat-containing protein ITN1-like [Cucurbita maxima]) HSP 1 Score: 103.6 bits (257), Expect = 3.1e-19 Identity = 55/70 (78.57%), Postives = 60/70 (85.71%), Query Frame = 0
BLAST of CsGy1G010400 vs. NCBI nr
Match: XP_023542599.1 (ankyrin repeat-containing protein ITN1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 103.2 bits (256), Expect = 4.0e-19 Identity = 55/70 (78.57%), Postives = 60/70 (85.71%), Query Frame = 0
BLAST of CsGy1G010400 vs. NCBI nr
Match: XP_022872473.1 (ankyrin repeat-containing protein ITN1-like [Olea europaea var. sylvestris]) HSP 1 Score: 91.3 bits (225), Expect = 1.6e-15 Identity = 45/57 (78.95%), Postives = 50/57 (87.72%), Query Frame = 0
BLAST of CsGy1G010400 vs. NCBI nr
Match: XP_022872461.1 (ankyrin repeat-containing protein ITN1-like [Olea europaea var. sylvestris]) HSP 1 Score: 91.3 bits (225), Expect = 1.6e-15 Identity = 45/57 (78.95%), Postives = 50/57 (87.72%), Query Frame = 0
BLAST of CsGy1G010400 vs. TAIR10
Match: AT3G18670.1 (Ankyrin repeat family protein) HSP 1 Score: 78.2 bits (191), Expect = 2.5e-15 Identity = 36/54 (66.67%), Postives = 45/54 (83.33%), Query Frame = 0
BLAST of CsGy1G010400 vs. TAIR10
Match: AT5G04700.1 (Ankyrin repeat family protein) HSP 1 Score: 69.7 bits (169), Expect = 9.0e-13 Identity = 34/67 (50.75%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of CsGy1G010400 vs. TAIR10
Match: AT3G54070.1 (Ankyrin repeat family protein) HSP 1 Score: 65.9 bits (159), Expect = 1.3e-11 Identity = 29/46 (63.04%), Postives = 39/46 (84.78%), Query Frame = 0
BLAST of CsGy1G010400 vs. TAIR10
Match: AT5G35810.1 (Ankyrin repeat family protein) HSP 1 Score: 65.9 bits (159), Expect = 1.3e-11 Identity = 34/61 (55.74%), Postives = 46/61 (75.41%), Query Frame = 0
BLAST of CsGy1G010400 vs. TAIR10
Match: AT5G04730.1 (Ankyrin-repeat containing protein) HSP 1 Score: 63.2 bits (152), Expect = 8.4e-11 Identity = 30/64 (46.88%), Postives = 44/64 (68.75%), Query Frame = 0
BLAST of CsGy1G010400 vs. TrEMBL
Match: tr|A0A2K1XM30|A0A2K1XM30_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G124900v3 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 8.9e-15 Identity = 43/62 (69.35%), Postives = 53/62 (85.48%), Query Frame = 0
BLAST of CsGy1G010400 vs. TrEMBL
Match: tr|A0A2N9FK05|A0A2N9FK05_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19019 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 9.8e-14 Identity = 42/72 (58.33%), Postives = 56/72 (77.78%), Query Frame = 0
BLAST of CsGy1G010400 vs. TrEMBL
Match: tr|A0A0A0LRT6|A0A0A0LRT6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058080 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 9.8e-14 Identity = 42/58 (72.41%), Postives = 48/58 (82.76%), Query Frame = 0
BLAST of CsGy1G010400 vs. TrEMBL
Match: tr|A0A059CAM7|A0A059CAM7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_E04257 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.3e-13 Identity = 45/68 (66.18%), Postives = 54/68 (79.41%), Query Frame = 0
BLAST of CsGy1G010400 vs. TrEMBL
Match: tr|A0A1S3B2F0|A0A1S3B2F0_CUCME (ankyrin repeat-containing protein At5g02620-like OS=Cucumis melo OX=3656 GN=LOC103485059 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.7e-13 Identity = 40/56 (71.43%), Postives = 48/56 (85.71%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |