CsGy1G009650 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G009650
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 5981888 .. 5982268 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAGCTCATATTTCAGCTCCATCTACAAATCCTGATGCGATAGTTGTTGACATTGACTGCACTATAAGCTTTAAATTTAAGAAACGCCTTGGAATAGCCACCAAGATATTATTTATGAATGGCCAACATTGGGGTATAGTTCTTCAACGGAGTACTAGACGAAAATGCCGTATATCTTGAAAACTTTTCAAGCGAGTCTGATGTTTTTCTAATATTCCAATAACTTTGCAGATGTTTGAGAGATTCCTTTTGCTTGTGAATATGGGAAAAACTCGACGGAATGAGAGCAGTTGTGCTTTGTTGAGCATGATCATGCCTTATCAAGAGCTTTTCTTGCCAATGATTCTGAATGATGAAGGAGATGATAGCCGAGGGTGA

mRNA sequence

ATGCGAGCTCATATTTCAGCTCCATCTACAAATCCTGATGCGATAGTTGTTGACATTGACTGCACTATAAGCTTTAAATTTAAGAAACGCCTTGGAATAGCCACCAAGATATTATTTATGAATGGCCAACATTGGGGTATAATGTTTGAGAGATTCCTTTTGCTTGTGAATATGGGAAAAACTCGACGGAATGAGAGCAGTTGTGCTTTGTTGAGCATGATCATGCCTTATCAAGAGCTTTTCTTGCCAATGATTCTGAATGATGAAGGAGATGATAGCCGAGGGTGA

Coding sequence (CDS)

ATGCGAGCTCATATTTCAGCTCCATCTACAAATCCTGATGCGATAGTTGTTGACATTGACTGCACTATAAGCTTTAAATTTAAGAAACGCCTTGGAATAGCCACCAAGATATTATTTATGAATGGCCAACATTGGGGTATAATGTTTGAGAGATTCCTTTTGCTTGTGAATATGGGAAAAACTCGACGGAATGAGAGCAGTTGTGCTTTGTTGAGCATGATCATGCCTTATCAAGAGCTTTTCTTGCCAATGATTCTGAATGATGAAGGAGATGATAGCCGAGGGTGA

Protein sequence

MRAHISAPSTNPDAIVVDIDCTISFKFKKRLGIATKILFMNGQHWGIMFERFLLLVNMGKTRRNESSCALLSMIMPYQELFLPMILNDEGDDSRG
Homology
[Close]
BLAST of CsGy1G009650 vs. NCBI nr
Match: KGN64416.1 (hypothetical protein Csa_1G050550 [Cucumis sativus])

HSP 1 Score: 197.2 bits (500), Expect = 2.5e-47
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MRAHISAPSTNPDAIVVDIDCTISFKFKKRLGIATKILFMNGQHWGIMFERFLLLVNMGK 60
          MRAHISAPSTNPDAIVVDIDCTISFKFKKRLGIATKILFMNGQHWGIMFERFLLLVNMGK
Sbjct: 1  MRAHISAPSTNPDAIVVDIDCTISFKFKKRLGIATKILFMNGQHWGIMFERFLLLVNMGK 60

Query: 61 TRRNESSCALLSMIMPYQELFLPMILNDEGDDSRG 96
          TRRNESSCALLSMIMPYQELFLPMILNDEGDDSRG
Sbjct: 61 TRRNESSCALLSMIMPYQELFLPMILNDEGDDSRG 95

[Close]
BLAST of CsGy1G009650 vs. TrEMBL
Match: tr|A0A0A0LWP7|A0A0A0LWP7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050550 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.7e-47
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MRAHISAPSTNPDAIVVDIDCTISFKFKKRLGIATKILFMNGQHWGIMFERFLLLVNMGK 60
          MRAHISAPSTNPDAIVVDIDCTISFKFKKRLGIATKILFMNGQHWGIMFERFLLLVNMGK
Sbjct: 1  MRAHISAPSTNPDAIVVDIDCTISFKFKKRLGIATKILFMNGQHWGIMFERFLLLVNMGK 60

Query: 61 TRRNESSCALLSMIMPYQELFLPMILNDEGDDSRG 96
          TRRNESSCALLSMIMPYQELFLPMILNDEGDDSRG
Sbjct: 61 TRRNESSCALLSMIMPYQELFLPMILNDEGDDSRG 95

The following BLAST results are available for this feature:
BLAST of CsGy1G009650 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64416.12.5e-47100.00hypothetical protein Csa_1G050550 [Cucumis sativus][more]
BLAST of CsGy1G009650 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G009650 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G009650 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LWP7|A0A0A0LWP7_CUCSA1.7e-47100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050550 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G009650.1CsGy1G009650.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G009650Csa1G050550Cucumber (Chinese Long) v2cgybcuB001
CsGy1G009650CSPI01G09590Wild cucumber (PI 183967)cgybcpiB001
CsGy1G009650CsaV3_1G009710Cucumber (Chinese Long) v3cgybcucB002
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G009650Cucumber (Gy14) v2cgybcgybB005
CsGy1G009650Cucurbita maxima (Rimu)cgybcmaB025
CsGy1G009650Cucurbita maxima (Rimu)cgybcmaB049
CsGy1G009650Cucurbita maxima (Rimu)cgybcmaB063
CsGy1G009650Cucurbita maxima (Rimu)cgybcmaB093
CsGy1G009650Cucurbita moschata (Rifu)cgybcmoB026
CsGy1G009650Cucurbita moschata (Rifu)cgybcmoB046
CsGy1G009650Cucurbita moschata (Rifu)cgybcmoB058
CsGy1G009650Cucurbita moschata (Rifu)cgybcmoB082
CsGy1G009650Cucurbita pepo (Zucchini)cgybcpeB018
CsGy1G009650Cucurbita pepo (Zucchini)cgybcpeB049
CsGy1G009650Cucurbita pepo (Zucchini)cgybcpeB080
CsGy1G009650Cucurbita pepo (Zucchini)cgybcpeB123
CsGy1G009650Cucumber (Chinese Long) v2cgybcuB014
CsGy1G009650Bottle gourd (USVL1VR-Ls)cgyblsiB018
CsGy1G009650Bottle gourd (USVL1VR-Ls)cgyblsiB064
CsGy1G009650Melon (DHL92) v3.5.1cgybmeB022
CsGy1G009650Melon (DHL92) v3.5.1cgybmeB046
CsGy1G009650Melon (DHL92) v3.6.1cgybmedB020
CsGy1G009650Melon (DHL92) v3.6.1cgybmedB041
CsGy1G009650Watermelon (Charleston Gray)cgybwcgB033
CsGy1G009650Watermelon (Charleston Gray)cgybwcgB069
CsGy1G009650Watermelon (97103) v1cgybwmB010
CsGy1G009650Watermelon (97103) v1cgybwmB087
CsGy1G009650Wild cucumber (PI 183967)cgybcpiB013
CsGy1G009650Silver-seed gourdcarcgybB0373
CsGy1G009650Silver-seed gourdcarcgybB0500
CsGy1G009650Silver-seed gourdcarcgybB0989
CsGy1G009650Cucumber (Chinese Long) v3cgybcucB010
CsGy1G009650Watermelon (97103) v2cgybwmbB032
CsGy1G009650Watermelon (97103) v2cgybwmbB070
CsGy1G009650Wax gourdcgybwgoB029