CsGy1G009370 (gene) Cucumber (Gy14) v2

NameCsGy1G009370
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr1 : 5828471 .. 5829703 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCAGCAGTGATGAGAGAGAACGAGAGTGATGGAGTCGAAGCTAGGGAGGTGTGAGGAAAGAAAGAAATTAAATGAACAGAAACAAAGATCATAATGAAGTAGCAAATTGGTGAATGGTGTGGTCTTGATGGGGTTGCAGCTGCTGTGGCAAACCAATTCATGGGTCTTCTTTAATTAGAGATCAGAGTTGTTGCCGCCGGTGATCATATGTACACAATTTCGGTGCCAACCTCCACCATTAGTTTGCTGCTGGTGGCACCACCACCTACAGACGACCCTTCTAATAATTCTCCCTGAGCATGTGCTGCCTAACCTCGTGCTTCAATTTTAATATTTAATATTTAATCTTTAAACAAATTTAAGTATTCTAAAGATTTTTGCATAGGTTGAAAGAATATTAATACTACTCTCTTTATAAATAATATATTTAAAAAATAAAATAACTTAAACCATTACGATAAAATGAAACCAAAGGGTATAAAAGGATAAAATAAATCATTAATACTACTCTCTTTATTCATAACTCTGAGTTCTCTAAGAGCGGTTGATCTCTCTCCTTTGCGCACTTCCTTCCACATCGATTCTCCACTCTCGCCGGCCTTCCTCCACCACCGCTTCTTCTCAATAGGTAACTTACCTTTCCTCTCACTTTCATTTTTTCCGTTTCACCTTCGAACCATTTCTGTAAACTTTTTGTTTGATTTTTCTTTCCCGCGCTATTTTTTAAAAATAAATTTCTTTACCGCCATTTTATTTGGTATTGTTTGCTTTCCCGCCATTTTATTTTATTATTTTCTTTCCCACCCTTTCATCCATTCCTTACATATTAGTCTTTGTTTAGTTTAGCTTTATGACTGTGATCATGATATACAGTGTTGTAAATCAGTTAGATCAACCCATATTTTCTAGTTGATTGAGTTAGCAACTCAAATAACCCTAATAATATTTCCAATCAAGTCCTTAAAATATGAGTTGAATTTTAAACTAATCCAACCCAACTTATACAATATCACTTTTATATTAGTGTTTTGAAGATCACTTTTATCCTTTTTCACATTGAAGAGTCTTGGGTCTAATTCTTCTAGATACAGTAAGCATATCTTGAACAACACACTGATTAAAAGTCGATACTGGTGGCTTAATATCATGAATAGCCCCATGATTTTCAGCTTCCAGCATATAAGTGGTAAAAGTTTGTTTGCTCATCCAAGCTCTCAAAGGGCCTAG

mRNA sequence

ATGGAAGCAGCAGTGATGAGAGAGAACGAGAGTGATGGAGTCGAAGCTAGGGAGAGTCTTGGGTCTAATTCTTCTAGATACAGTAAGCATATCTTGAACAACACACTGATTAAAAGTCGATACTGGTGGCTTAATATCATGAATAGCCCCATGATTTTCAGCTTCCAGCATATAAGTGGTAAAAGTTTGTTTGCTCATCCAAGCTCTCAAAGGGCCTAG

Coding sequence (CDS)

ATGGAAGCAGCAGTGATGAGAGAGAACGAGAGTGATGGAGTCGAAGCTAGGGAGAGTCTTGGGTCTAATTCTTCTAGATACAGTAAGCATATCTTGAACAACACACTGATTAAAAGTCGATACTGGTGGCTTAATATCATGAATAGCCCCATGATTTTCAGCTTCCAGCATATAAGTGGTAAAAGTTTGTTTGCTCATCCAAGCTCTCAAAGGGCCTAG

Protein sequence

MEAAVMRENESDGVEARESLGSNSSRYSKHILNNTLIKSRYWWLNIMNSPMIFSFQHISGKSLFAHPSSQRA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G009370.1CsGy1G009370.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G009370Cucumber (Chinese Long) v3cgybcucB002
CsGy1G009370Cucumber (Chinese Long) v3cgybcucB010
CsGy1G009370Watermelon (97103) v2cgybwmbB032
CsGy1G009370Watermelon (97103) v2cgybwmbB070
CsGy1G009370Wax gourdcgybwgoB064
CsGy1G009370Cucumber (Gy14) v2cgybcgybB005
CsGy1G009370Cucurbita maxima (Rimu)cgybcmaB025
CsGy1G009370Cucurbita maxima (Rimu)cgybcmaB049
CsGy1G009370Cucurbita maxima (Rimu)cgybcmaB063
CsGy1G009370Cucurbita maxima (Rimu)cgybcmaB085
CsGy1G009370Cucurbita moschata (Rifu)cgybcmoB026
CsGy1G009370Cucurbita moschata (Rifu)cgybcmoB046
CsGy1G009370Cucurbita moschata (Rifu)cgybcmoB058
CsGy1G009370Cucurbita moschata (Rifu)cgybcmoB082
CsGy1G009370Cucurbita pepo (Zucchini)cgybcpeB018
CsGy1G009370Cucurbita pepo (Zucchini)cgybcpeB049
CsGy1G009370Cucurbita pepo (Zucchini)cgybcpeB080
CsGy1G009370Cucumber (Chinese Long) v2cgybcuB001
CsGy1G009370Cucumber (Chinese Long) v2cgybcuB014
CsGy1G009370Bottle gourd (USVL1VR-Ls)cgyblsiB018
CsGy1G009370Bottle gourd (USVL1VR-Ls)cgyblsiB064
CsGy1G009370Melon (DHL92) v3.5.1cgybmeB022
CsGy1G009370Melon (DHL92) v3.5.1cgybmeB046
CsGy1G009370Melon (DHL92) v3.6.1cgybmedB020
CsGy1G009370Melon (DHL92) v3.6.1cgybmedB041
CsGy1G009370Watermelon (Charleston Gray)cgybwcgB033
CsGy1G009370Watermelon (Charleston Gray)cgybwcgB069
CsGy1G009370Watermelon (97103) v1cgybwmB010
CsGy1G009370Watermelon (97103) v1cgybwmB087
CsGy1G009370Wild cucumber (PI 183967)cgybcpiB001
CsGy1G009370Wild cucumber (PI 183967)cgybcpiB013
CsGy1G009370Silver-seed gourdcarcgybB0373
CsGy1G009370Silver-seed gourdcarcgybB0500
CsGy1G009370Silver-seed gourdcarcgybB0989