CsGy1G009010 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G009010
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Putative pectinesterase/pectinesterase inhibitor 38
Location	Chr1 : 5615535 .. 5616942 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATGACAGATGAAATTTTTTTCTCATATTCTTCTTTTACTTATGTTTAGCCATTCGTGTTTCATTACTCAAACCCATCAAACTACCGTCTCAAATGACTTTGTCAAAGTCACCTGTATGAAACATAGAGAATTGAGCAATATATGTATGAATGTAGTAGGTTTAGATCCTCATCAGGGTTGGAAATTAAACTTGCAATGTTACAGAAAATGTATAGTAAAATCATGAAATTGTAATAAATTTTGGAGGGTGAAACGTAAGTATCCAACCCATGTGATTATTTCCATTAGTTGAATTTTACATAATCTTCTTTTAGTATATGTCATTGTCATTGTCATAAAATAAATCAAATTAACTCTAGCCAAAATTCCTTTCACAGTGGAAATGGATCATCAAGGTGCCACCTCCTTATATAAATATTGGTTTTCCATGAAAGAGTTTAGAAAAAACACATATAAACCATGCAAATAAATTATTTGATTTTTGATCCTTTTCTCCGTAATCTTGTAATTAAAAATGACATTTTTTATCCAAAAACTTGTTGCATATTTTCTTATTATTTTTGCATGAGTTTTATTATTGCACTCGTTAGGAAACTTGTTATGTTTAATGCTCTTGTATCGTTAGATGGAAGTGGAGACTTTATAAGTATTGGTGCCATAATTGCTGCGGCACCAAAAATAATAGCAAGTGATGTTTTACATTTATGTGAAACCATGAATATATAGGGAGCACGTTAAAGTTGAAGGTTACATAACTTTTATAACATTAATTAGGAATGATGTGGCCATTACTGTGATTGCTGATGATAGAAGCAATGCCATTGGTTTTGCAACCTCCAAATCTGGCACCTTTTGTAGGCTTGAATTACTCATCATTTTTTCTTCTTTTTCTTTTTCAATCGGTTCTCTTCAAGTGAGAAAGAAAAATGCTCTCTTTTAAGTTCCTATGATTTTGAGTAGTTGGTCTTAGACTTCCTCTTAATTATTATTTTGAGTTAAATTTTCTTTGCAGTTGTGAAGGCAACAACTTTATGGCACAACACAACATTTCAAAATTTGGGTGGACCTGAGAATGGCCAAGCAGTTGCTCTTGTCAATAACAACATTCAAGCGGTATATTACGAGCGTGTTTTTGTAGGATACCAAGACACACTTAGTGTAAATGGAAAGCAACTGTTCTTCAAAGACTGTAAAATCTATGGACTTGCTGTATTTCAAGATTATAAAATATATATACGATTACGGCCAAGTAATACTATTACCATCACTGCACAGTCTAAAAAATCAATAAACGGAAATAGTTGTTTGTCCTTCCAAAGTTGTGATGTAATAGTATTACTTGGTTTGGACCACAGATTTAACAAAGAAGGAGTCATCGTTTCTTGGTTTCCAGATCGGTTGA

mRNA sequence

ATGGGGTTGGAAATTAAACTTGCAATGTTACAGAAAATGAATGATGTGGCCATTACTGTGATTGCTGATGATAGAAGCAATGCCATTGGTTTTGCAACCTCCAAATCTGGCACCTTTTTTGTGAAGGCAACAACTTTATGGCACAACACAACATTTCAAAATTTGGGTGGACCTGAGAATGGCCAAGCAGTTGCTCTTGTCAATAACAACATTCAAGCGGTATATTACGAGCGTGTTTTTGTAGGATACCAAGACACACTTAGTGTAAATGGAAAGCAACTGTTCTTCAAAGACTGTAAAATCTATGGACTTGCTGTATTTCAAGATTATAAAATATATATACGATTACGGCCAAATTTAACAAAGAAGGAGTCATCGTTTCTTGGTTTCCAGATCGGTTGA

Coding sequence (CDS)

ATGGGGTTGGAAATTAAACTTGCAATGTTACAGAAAATGAATGATGTGGCCATTACTGTGATTGCTGATGATAGAAGCAATGCCATTGGTTTTGCAACCTCCAAATCTGGCACCTTTTTTGTGAAGGCAACAACTTTATGGCACAACACAACATTTCAAAATTTGGGTGGACCTGAGAATGGCCAAGCAGTTGCTCTTGTCAATAACAACATTCAAGCGGTATATTACGAGCGTGTTTTTGTAGGATACCAAGACACACTTAGTGTAAATGGAAAGCAACTGTTCTTCAAAGACTGTAAAATCTATGGACTTGCTGTATTTCAAGATTATAAAATATATATACGATTACGGCCAAATTTAACAAAGAAGGAGTCATCGTTTCTTGGTTTCCAGATCGGTTGA

Protein sequence

MGLEIKLAMLQKMNDVAITVIADDRSNAIGFATSKSGTFFVKATTLWHNTTFQNLGGPENGQAVALVNNNIQAVYYERVFVGYQDTLSVNGKQLFFKDCKIYGLAVFQDYKIYIRLRPNLTKKESSFLGFQIG

Homology

[Close]

BLAST of CsGy1G009010 vs. NCBI nr
Match: XP_022143502.1 (pectinesterase-like [Momordica charantia])

HSP 1 Score: 104.8 bits (260), Expect = 2.4e-19
Identity = 58/117 (49.57%), Postives = 74/117 (63.25%), Query Frame = 0


Query: 14  NDVAITVIADDRSNAIGFATSKSGTFFVKATT-LWHNTTFQNLGGPENGQAVALVNNNIQ 73
           ++ A TVI D+RSN  GF TS+S TF V+    +  + TF+N  GP NGQAVAL+N+   
Sbjct: 62  DNAATTVIVDNRSNGTGFGTSQSATFAVRGNNFMAKSITFENSAGPNNGQAVALLNDQAN 121

Query: 74  AV-YYERVFVGYQDTLSVNGKQLFFKDCKIY---------GLAVFQDYKIYIRLRPN 120
            + +Y  VF+GYQDT+ +NG  LFFKDC+I          GLAVFQD KIY R   N
Sbjct: 122 YITFYRCVFLGYQDTIFINGNHLFFKDCEICGTVDFIFGDGLAVFQDCKIYARSSNN 178

[Close]

BLAST of CsGy1G009010 vs. NCBI nr
Match: XP_022148123.1 (probable pectinesterase/pectinesterase inhibitor 39 [Momordica charantia])

HSP 1 Score: 101.7 bits (252), Expect = 2.0e-18
Identity = 58/125 (46.40%), Postives = 75/125 (60.00%), Query Frame = 0


Query: 14  NDVAITVIADDRSNAIGFATSKSGTFFVKAT-TLWHNTTFQNLGGPENGQAVALVNNNIQ 73
           +D + TVI DDRSN  GF+T+ S TF VKA   +    TFQN  GPENGQAVA+++    
Sbjct: 86  DDASTTVIVDDRSNHAGFSTTSSATFTVKAKHFVAQFLTFQNSAGPENGQAVAVLSEANY 145

Query: 74  AVYYERVFVGYQDTLSVNGKQLFFKDCKIY---------GLAVFQDYKIYIR-LRPNLTK 128
             YY+ VF+GYQDTL V G    FK+C +Y         GLA+FQD  +Y R L   +T 
Sbjct: 146 TAYYKCVFMGYQDTLYVRGAFQLFKECDVYGSIDFIFGDGLAIFQDCNVYARILGTTITA 205

[Close]

BLAST of CsGy1G009010 vs. NCBI nr
Match: XP_022150325.1 (probable pectinesterase/pectinesterase inhibitor 44 [Momordica charantia])

HSP 1 Score: 94.4 bits (233), Expect = 3.2e-16
Identity = 51/113 (45.13%), Postives = 67/113 (59.29%), Query Frame = 0


Query: 14  NDVAITVIADDRSNAIGFATSKSGTFFVKATT-LWHNTTFQNLGGPENGQAVALVNNNIQ 73
           +D + T+I D+RSN  GF+T+ S T  V     +  + TFQN  GP+ GQAVA+++    
Sbjct: 86  DDASTTIIVDNRSNGTGFSTATSATLTVSGENFMAQSLTFQNSAGPDKGQAVAVLDQAKH 145

Query: 74  AVYYERVFVGYQDTLSVNGKQLFFKDCKIY---------GLAVFQDYKIYIRL 117
            VYY+ VF+GYQDTL       FFK+C IY         GLA+FQD  IY RL
Sbjct: 146 TVYYKCVFLGYQDTLFAGAVPQFFKECDIYGSVDFIFGNGLAIFQDCNIYARL 198

[Close]

BLAST of CsGy1G009010 vs. NCBI nr
Match: XP_011656190.1 (PREDICTED: probable pectinesterase/pectinesterase inhibitor 41 [Cucumis sativus])

HSP 1 Score: 90.9 bits (224), Expect = 3.5e-15
Identity = 53/111 (47.75%), Postives = 65/111 (58.56%), Query Frame = 0


Query: 19  TVIADDRSNAIGFATSKSGTFFVKATT-LWHNTTFQNLGGPENGQAVALVNNNIQAVYYE 78
           T+I DDRSNA GF T  S T  V     L  + TF+N  GP+NGQAVA+++      YY+
Sbjct: 61  TIIVDDRSNARGFKTIDSATLTVNGNNFLAQSLTFKNSAGPQNGQAVAVLDEAHFTTYYK 120

Query: 79  RVFVGYQDTLSVNGKQLFFKDCKIY---------GLAVFQDYKIYIRLRPN 120
             F+G+QDTL V GK  FFK+C IY         GL +FQD  IY R  PN
Sbjct: 121 CRFLGFQDTLYVRGKPQFFKECDIYGSVDFIFGDGLVMFQDCNIYAR-EPN 170

[Close]

BLAST of CsGy1G009010 vs. NCBI nr
Match: XP_008465596.1 (PREDICTED: probable pectinesterase/pectinesterase inhibitor 47, partial [Cucumis melo])

HSP 1 Score: 90.1 bits (222), Expect = 6.0e-15
Identity = 52/128 (40.62%), Postives = 71/128 (55.47%), Query Frame = 0


Query: 14  NDVAITVIADDRSNAIGFATSKSGTFFVKATT-LWHNTTFQNLGGPENGQAVALVNNNIQ 73
           +D   T+I D+RSN  GF T+ S T  V+    +  + TF+N  GP+NGQAVA+ +    
Sbjct: 22  DDAFTTIIIDNRSNGTGFKTNNSATLTVQGNNFMAKSLTFENSAGPQNGQAVAVFDKADH 81

Query: 74  AVYYERVFVGYQDTLSVNGKQLFFKDCKIY---------GLAVFQDYKIYIRLRPN---L 129
             YY+  F+G+QDTL VNGK  FFK+  IY         G  +FQD  IY R+  N   +
Sbjct: 82  TAYYKCRFLGFQDTLYVNGKYQFFKESNIYGSVDFIFGHGRVMFQDCNIYARMPSNSITV 141

[Close]

BLAST of CsGy1G009010 vs. TAIR10
Match: AT4G00190.1 (pectin methylesterase 38)

HSP 1 Score: 78.2 bits (191), Expect = 4.3e-15
Identity = 45/111 (40.54%), Postives = 63/111 (56.76%), Query Frame = 0


Query: 19  TVIADDRSNAIGFATSKSGTFFVKAT-TLWHNTTFQNLGGPENGQAVALVNNNIQAVYYE 78
           T+I  D+S   GF+T KS TF  +    +  + T +N  GPEN QAVAL +N+  +V+Y 
Sbjct: 227 TIITGDKSKGRGFSTYKSATFVAEGDGFVGRDITIRNTAGPENHQAVALRSNSDMSVFYR 286

Query: 79  RVFVGYQDTLSVNGKQLFFKDCKIYG---------LAVFQDYKIYIRLRPN 120
               GYQDTL V+  + FF++C IYG          AV Q+ +I+ R  PN
Sbjct: 287 CSIEGYQDTLYVHSGRQFFRECDIYGTVDFIFGNAAAVLQNCRIFARNPPN 337

[Close]

BLAST of CsGy1G009010 vs. TAIR10
Match: AT5G04970.1 (Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 68.2 bits (165), Expect = 4.5e-12
Identity = 43/117 (36.75%), Postives = 63/117 (53.85%), Query Frame = 0


Query: 19  TVIADDRSNAIGFATSKSGTFFVKATT-LWHNTTFQNLGGPENGQAVALVNNNIQAVYYE 78
           T+I+ + S   G+ T  S TF V     +  + TF+N  GPE  QAVA+ NN   + +Y 
Sbjct: 371 TIISGNHSFIDGWTTYNSSTFAVVGDRFVAVDVTFRNTAGPEKHQAVAVRNNADGSTFYR 430

Query: 79  RVFVGYQDTLSVNGKQLFFKDCKIYG---------LAVFQDYKIYIRLRPNLTKKES 126
             F GYQDTL V+  + F+++C IYG          A+FQ+  IY R +P   +K +
Sbjct: 431 CSFEGYQDTLYVHSLRQFYRECDIYGTIDFIFGNAAAIFQNCNIYAR-KPMANQKNA 486

[Close]

BLAST of CsGy1G009010 vs. TAIR10
Match: AT3G60730.1 (Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 67.4 bits (163), Expect = 7.6e-12
Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = 0


Query: 19  TVIADDRSNAIGFATSKSGTFFVKATTLW-HNTTFQNLGGPENGQAVALVNNNIQAVYYE 78
           T++ ++R+   G  T  S TF V     W  + TF+N  GP   QAVAL  ++  +++Y 
Sbjct: 269 TIVTNNRNVPDGSTTYGSATFGVSGDGFWARDITFENTAGPHKHQAVALRVSSDLSLFYR 328

Query: 79  RVFVGYQDTLSVNGKQLFFKDCKIYG---------LAVFQDYKIYIR 116
             F GYQDTL  +  + F++DC IYG          AVFQ+  I++R
Sbjct: 329 CSFKGYQDTLFTHSLRQFYRDCHIYGTIDFIFGDAAAVFQNCDIFVR 375

[Close]

BLAST of CsGy1G009010 vs. TAIR10
Match: AT3G05620.1 (Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 67.0 bits (162), Expect = 9.9e-12
Identity = 42/114 (36.84%), Postives = 61/114 (53.51%), Query Frame = 0


Query: 19  TVIADDRSNAIGFATSKSGTFFVKAT-TLWHNTTFQNLGGPENGQAVALVNNNIQAVYYE 78
           T+I  DR+   G  T ++ T  V     +  + TF+N  GP+N QAVAL  ++ Q+ +Y 
Sbjct: 301 TIITGDRNFMQGLTTFRTATVAVSGRGFIAKDITFRNTAGPQNRQAVALRVDSDQSAFYR 360

Query: 79  RVFVGYQDTLSVNGKQLFFKDCKIY---------GLAVFQDYKIYIRLRPNLTK 123
               GYQDTL  +  + F++DC+IY         G AV Q+ KIY R+   L K
Sbjct: 361 CSVEGYQDTLYAHSLRQFYRDCEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQK 414

[Close]

BLAST of CsGy1G009010 vs. TAIR10
Match: AT4G02320.1 (Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 64.7 bits (156), Expect = 4.9e-11
Identity = 42/115 (36.52%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 19  TVIADDRSNAIGFATSKSGTFFVKAT-TLWHNTTFQNLGGPENGQAVALVNNNIQAVYYE 78
           TVI  +RS A G+    S T  V+ +  +  + +F N  GPE  QAVAL +++  + YY 
Sbjct: 268 TVIKANRSYADGWTAFHSATVGVRGSGFIAKDLSFVNYAGPEKHQAVALRSSSDLSAYYR 327

Query: 79  RVFVGYQDTLSVNGKQLFFKDCKIYGL---------AVFQDYKIYIRLRPNLTKK 124
             F  YQDT+ V+  + F+++C IYG           VFQ+  +Y R RPN  +K
Sbjct: 328 CSFESYQDTIYVHSHKQFYRECDIYGTVDFIFGDASVVFQNCSLYAR-RPNPNQK 381

[Close]

BLAST of CsGy1G009010 vs. Swiss-Prot
Match: sp|O81320|PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana OX=3702 GN=PME38 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 7.8e-14
Identity = 45/111 (40.54%), Postives = 63/111 (56.76%), Query Frame = 0


Query: 19  TVIADDRSNAIGFATSKSGTFFVKAT-TLWHNTTFQNLGGPENGQAVALVNNNIQAVYYE 78
           T+I  D+S   GF+T KS TF  +    +  + T +N  GPEN QAVAL +N+  +V+Y 
Sbjct: 227 TIITGDKSKGRGFSTYKSATFVAEGDGFVGRDITIRNTAGPENHQAVALRSNSDMSVFYR 286

Query: 79  RVFVGYQDTLSVNGKQLFFKDCKIYG---------LAVFQDYKIYIRLRPN 120
               GYQDTL V+  + FF++C IYG          AV Q+ +I+ R  PN
Sbjct: 287 CSIEGYQDTLYVHSGRQFFRECDIYGTVDFIFGNAAAVLQNCRIFARNPPN 337

[Close]

BLAST of CsGy1G009010 vs. Swiss-Prot
Match: sp|O04887|PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis OX=2711 GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.7e-11
Identity = 45/130 (34.62%), Postives = 67/130 (51.54%), Query Frame = 0


Query: 3   LEIKLAMLQKMND-VAITVIADDRSNAIGFATSKSGTFFVKATT-LWHNTTFQNLGGPEN 62
           +E+KL  +  + D +  T+I   +S   G  T KS T  V     +  + T +N  GP N
Sbjct: 244 IEVKLKNIMFVGDGIGKTIITGSKSVGGGATTFKSATVAVVGDNFIARDITIRNTAGPNN 303

Query: 63  GQAVALVNNNIQAVYYERVFVGYQDTLSVNGKQLFFKDCKIYG---------LAVFQDYK 122
            QAVAL + +  +V+Y   F GYQDTL V+ ++ F+++C IYG           V Q+  
Sbjct: 304 HQAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRQFYRECDIYGTVDFIFGNAAVVLQNCN 363

[Close]

BLAST of CsGy1G009010 vs. Swiss-Prot
Match: sp|Q9FF77|PME47_ARATH (Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana OX=3702 GN=PME47 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 8.0e-11
Identity = 43/117 (36.75%), Postives = 63/117 (53.85%), Query Frame = 0


Query: 19  TVIADDRSNAIGFATSKSGTFFVKATT-LWHNTTFQNLGGPENGQAVALVNNNIQAVYYE 78
           T+I+ + S   G+ T  S TF V     +  + TF+N  GPE  QAVA+ NN   + +Y 
Sbjct: 371 TIISGNHSFIDGWTTYNSSTFAVVGDRFVAVDVTFRNTAGPEKHQAVAVRNNADGSTFYR 430

Query: 79  RVFVGYQDTLSVNGKQLFFKDCKIYG---------LAVFQDYKIYIRLRPNLTKKES 126
             F GYQDTL V+  + F+++C IYG          A+FQ+  IY R +P   +K +
Sbjct: 431 CSFEGYQDTLYVHSLRQFYRECDIYGTIDFIFGNAAAIFQNCNIYAR-KPMANQKNA 486

[Close]

BLAST of CsGy1G009010 vs. Swiss-Prot
Match: sp|Q84R10|PME36_ARATH (Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana OX=3702 GN=PME36 PE=2 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-10
Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = 0


Query: 19  TVIADDRSNAIGFATSKSGTFFVKATTLW-HNTTFQNLGGPENGQAVALVNNNIQAVYYE 78
           T++ ++R+   G  T  S TF V     W  + TF+N  GP   QAVAL  ++  +++Y 
Sbjct: 269 TIVTNNRNVPDGSTTYGSATFGVSGDGFWARDITFENTAGPHKHQAVALRVSSDLSLFYR 328

Query: 79  RVFVGYQDTLSVNGKQLFFKDCKIYG---------LAVFQDYKIYIR 116
             F GYQDTL  +  + F++DC IYG          AVFQ+  I++R
Sbjct: 329 CSFKGYQDTLFTHSLRQFYRDCHIYGTIDFIFGDAAAVFQNCDIFVR 375

[Close]

BLAST of CsGy1G009010 vs. Swiss-Prot
Match: sp|Q9M9W7|PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana OX=3702 GN=PME22 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.8e-10
Identity = 42/114 (36.84%), Postives = 61/114 (53.51%), Query Frame = 0


Query: 19  TVIADDRSNAIGFATSKSGTFFVKAT-TLWHNTTFQNLGGPENGQAVALVNNNIQAVYYE 78
           T+I  DR+   G  T ++ T  V     +  + TF+N  GP+N QAVAL  ++ Q+ +Y 
Sbjct: 301 TIITGDRNFMQGLTTFRTATVAVSGRGFIAKDITFRNTAGPQNRQAVALRVDSDQSAFYR 360

Query: 79  RVFVGYQDTLSVNGKQLFFKDCKIY---------GLAVFQDYKIYIRLRPNLTK 123
               GYQDTL  +  + F++DC+IY         G AV Q+ KIY R+   L K
Sbjct: 361 CSVEGYQDTLYAHSLRQFYRDCEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQK 414

[Close]

BLAST of CsGy1G009010 vs. TrEMBL
Match: tr|A0A1S3CP85|A0A1S3CP85_CUCME (Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103503231 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 4.0e-15
Identity = 52/128 (40.62%), Postives = 71/128 (55.47%), Query Frame = 0


Query: 14  NDVAITVIADDRSNAIGFATSKSGTFFVKATT-LWHNTTFQNLGGPENGQAVALVNNNIQ 73
           +D   T+I D+RSN  GF T+ S T  V+    +  + TF+N  GP+NGQAVA+ +    
Sbjct: 22  DDAFTTIIIDNRSNGTGFKTNNSATLTVQGNNFMAKSLTFENSAGPQNGQAVAVFDKADH 81

Query: 74  AVYYERVFVGYQDTLSVNGKQLFFKDCKIY---------GLAVFQDYKIYIRLRPN---L 129
             YY+  F+G+QDTL VNGK  FFK+  IY         G  +FQD  IY R+  N   +
Sbjct: 82  TAYYKCRFLGFQDTLYVNGKYQFFKESNIYGSVDFIFGHGRVMFQDCNIYARMPSNSITV 141

[Close]

BLAST of CsGy1G009010 vs. TrEMBL
Match: tr|A0A1U7X2P7|A0A1U7X2P7_NICSY (pectinesterase-like OS=Nicotiana sylvestris OX=4096 GN=LOC104230112 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.0e-14
Identity = 50/107 (46.73%), Postives = 67/107 (62.62%), Query Frame = 0


Query: 19  TVIADDRSNAIGFATSKSGTFFVK-ATTLWHNTTFQNLGGPENGQAVALVNNNIQAVYYE 78
           T+I+ +RSN  G++TS S TF V     L  + TF+N  GPENGQAVAL + +  +VYY 
Sbjct: 169 TIISGNRSNVTGYSTSGSATFGVSGGGFLAKDITFENTAGPENGQAVALRSESDLSVYYR 228

Query: 79  RVFVGYQDTLSVNGKQLFFKDCKIYG---------LAVFQDYKIYIR 116
             F GYQDTL V+ ++ F++DC IYG          AVFQ+  IY+R
Sbjct: 229 CSFKGYQDTLYVHKQRQFYRDCDIYGKVDFIFGDATAVFQNCNIYLR 275

[Close]

BLAST of CsGy1G009010 vs. TrEMBL
Match: tr|W9R0V6|W9R0V6_9ROSA (Pectinesterase OS=Morus notabilis OX=981085 GN=L484_012499 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.4e-14
Identity = 49/112 (43.75%), Postives = 64/112 (57.14%), Query Frame = 0


Query: 14  NDVAITVIADDRSNAIGFATSKSGTFFVKAT-TLWHNTTFQNLGGPENGQAVALVNNNIQ 73
           +DV  T+I  DRSN  GF T+++GT  V     +  + T +N  GP+N QA AL N   Q
Sbjct: 27  DDVTTTIIIFDRSNGSGFKTNETGTLSVMGQGFVAKSLTIENSTGPQNHQAAALYNTADQ 86

Query: 74  AVYYERVFVGYQDTLSVNGKQLFFKDCKIYGL---------AVFQDYKIYIR 116
           + +Y  +F+GYQDTL     + F+KDCKIYG          AVFQD  IY R
Sbjct: 87  SAFYNCIFLGYQDTLYAKENRQFYKDCKIYGTVDFIFGHAKAVFQDCHIYAR 138

[Close]

BLAST of CsGy1G009010 vs. TrEMBL
Match: tr|A0A2G2WN62|A0A2G2WN62_CAPBA (Pectinesterase OS=Capsicum baccatum OX=33114 GN=CQW23_15835 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.7e-13
Identity = 50/114 (43.86%), Postives = 69/114 (60.53%), Query Frame = 0


Query: 16  VAITVIADDRSNAIGFATSKSGTFFVK-ATTLWHNTTFQNLGGPENGQAVALVNNNIQAV 75
           + +TVI  +RSN  GF T +S TF V     +  + TF+N  GPE GQAVAL +++  +V
Sbjct: 215 IDVTVITGNRSNRTGFTTFRSATFDVSGGGFIAKDITFENTAGPEQGQAVALRSDSDLSV 274

Query: 76  YYERVFVGYQDTLSVNGKQLFFKDCKIYG---------LAVFQDYKIYIRLRPN 120
           ++   F GYQDTL V+  + F++DC IYG          AVFQ+  IYIR +PN
Sbjct: 275 FHRCSFKGYQDTLYVHAHRQFYRDCDIYGTVDFIFGDATAVFQNCNIYIR-KPN 327

[Close]

BLAST of CsGy1G009010 vs. TrEMBL
Match: tr|A0A2G3CC48|A0A2G3CC48_CAPCH (Pectinesterase OS=Capsicum chinense OX=80379 GN=BC332_17506 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.9e-13
Identity = 50/114 (43.86%), Postives = 69/114 (60.53%), Query Frame = 0


Query: 16  VAITVIADDRSNAIGFATSKSGTFFVK-ATTLWHNTTFQNLGGPENGQAVALVNNNIQAV 75
           + +TVI  +RSN  GF T +S TF V     +  + TF+N  GPE GQAVAL +++  +V
Sbjct: 215 IDVTVITGNRSNRTGFTTFRSATFDVSGGGFIAKDITFENTAGPEQGQAVALRSDSDLSV 274

Query: 76  YYERVFVGYQDTLSVNGKQLFFKDCKIYG---------LAVFQDYKIYIRLRPN 120
           ++   F GYQDTL V+  + F++DC IYG          AVFQ+  IYIR +PN
Sbjct: 275 FHRCSFKGYQDTLYVHTHRQFYRDCDIYGTVDFIFGDATAVFQNCNIYIR-KPN 327

The following BLAST results are available for this feature:

BLAST of CsGy1G009010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143502.1	2.4e-19	49.57	pectinesterase-like [Momordica charantia]	[more]
XP_022148123.1	2.0e-18	46.40	probable pectinesterase/pectinesterase inhibitor 39 [Momordica charantia]	[more]
XP_022150325.1	3.2e-16	45.13	probable pectinesterase/pectinesterase inhibitor 44 [Momordica charantia]	[more]
XP_011656190.1	3.5e-15	47.75	PREDICTED: probable pectinesterase/pectinesterase inhibitor 41 [Cucumis sativus]	[more]
XP_008465596.1	6.0e-15	40.63	PREDICTED: probable pectinesterase/pectinesterase inhibitor 47, partial [Cucumis...	[more]

BLAST of CsGy1G009010 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00190.1	4.3e-15	40.54	pectin methylesterase 38	[more]
AT5G04970.1	4.5e-12	36.75	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT3G60730.1	7.6e-12	36.45	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT3G05620.1	9.9e-12	36.84	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT4G02320.1	4.9e-11	36.52	Plant invertase/pectin methylesterase inhibitor superfamily	[more]

BLAST of CsGy1G009010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O81320\|PME38_ARATH	7.8e-14	40.54	Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana OX=3...	[more]
sp\|O04887\|PME2_CITSI	4.7e-11	34.62	Pectinesterase 2 OS=Citrus sinensis OX=2711 GN=PECS-2.1 PE=2 SV=1	[more]
sp\|Q9FF77\|PME47_ARATH	8.0e-11	36.75	Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana OX=3...	[more]
sp\|Q84R10\|PME36_ARATH	1.4e-10	36.45	Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana OX=3...	[more]
sp\|Q9M9W7\|PME22_ARATH	1.8e-10	36.84	Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of CsGy1G009010 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CP85\|A0A1S3CP85_CUCME	4.0e-15	40.63	Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103503231 PE=4 SV=1	[more]
tr\|A0A1U7X2P7\|A0A1U7X2P7_NICSY	2.0e-14	46.73	pectinesterase-like OS=Nicotiana sylvestris OX=4096 GN=LOC104230112 PE=4 SV=1	[more]
tr\|W9R0V6\|W9R0V6_9ROSA	4.4e-14	43.75	Pectinesterase OS=Morus notabilis OX=981085 GN=L484_012499 PE=4 SV=1	[more]
tr\|A0A2G2WN62\|A0A2G2WN62_CAPBA	1.7e-13	43.86	Pectinesterase OS=Capsicum baccatum OX=33114 GN=CQW23_15835 PE=3 SV=1	[more]
tr\|A0A2G3CC48\|A0A2G3CC48_CAPCH	2.9e-13	43.86	Pectinesterase OS=Capsicum chinense OX=80379 GN=BC332_17506 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0030599	pectinesterase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005618	cell wall

Vocabulary: **Biological Process**
Term	Definition
GO:0042545	cell wall modification

Vocabulary: **INTERPRO**
Term	Definition
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold
IPR000070	Pectinesterase_cat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0042545	cell wall modification
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005618	cell wall
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0030599	pectinesterase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G009010.1	CsGy1G009010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 18..105 e-value: 1.9E-16 score: 59.6
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 5..126 e-value: 1.1E-17 score: 66.2
None	No IPR available	PANTHER	PTHR31707	FAMILY NOT NAMED	coord: 17..104
None	No IPR available	PANTHER	PTHR31707:SF25	PECTINESTERASE/PECTINESTERASE INHIBITOR 39-RELATED	coord: 17..104
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	SSF51126	Pectin lyase-like	coord: 19..117

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G009010	MELO3C002317.2	Melon (DHL92) v3.6.1	cgybmedB020
CsGy1G009010	CsaV3_1G009070	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G009010	Cla97C03G054330	Watermelon (97103) v2	cgybwmbB032

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G009010	Cucurbita maxima (Rimu)	cgybcmaB049
CsGy1G009010	Cucurbita maxima (Rimu)	cgybcmaB063
CsGy1G009010	Cucurbita maxima (Rimu)	cgybcmaB085
CsGy1G009010	Cucurbita maxima (Rimu)	cgybcmaB102
CsGy1G009010	Cucurbita moschata (Rifu)	cgybcmoB026
CsGy1G009010	Cucurbita moschata (Rifu)	cgybcmoB058
CsGy1G009010	Cucurbita moschata (Rifu)	cgybcmoB082
CsGy1G009010	Cucurbita pepo (Zucchini)	cgybcpeB018
CsGy1G009010	Cucurbita pepo (Zucchini)	cgybcpeB080
CsGy1G009010	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G009010	Bottle gourd (USVL1VR-Ls)	cgyblsiB018
CsGy1G009010	Melon (DHL92) v3.5.1	cgybmeB022
CsGy1G009010	Watermelon (Charleston Gray)	cgybwcgB033
CsGy1G009010	Watermelon (Charleston Gray)	cgybwcgB069
CsGy1G009010	Watermelon (97103) v1	cgybwmB010
CsGy1G009010	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G009010	Silver-seed gourd	carcgybB0500
CsGy1G009010	Silver-seed gourd	carcgybB0620
CsGy1G009010	Silver-seed gourd	carcgybB0989
CsGy1G009010	Cucumber (Chinese Long) v3	cgybcucB018
CsGy1G009010	Watermelon (97103) v2	cgybwmbB055
CsGy1G009010	Watermelon (97103) v2	cgybwmbB070
CsGy1G009010	Watermelon (97103) v2	cgybwmbB084
CsGy1G009010	Wax gourd	cgybwgoB027
CsGy1G009010	Wax gourd	cgybwgoB065