CsGy1G007840 (gene) Cucumber (Gy14) v2

NameCsGy1G007840
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr1 : 5012722 .. 5013717 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCATAGTATAAATGTGTTGACAGAAGCTAGGAGACAAGTAACGTAATCTCAAGAACAGAATCGTTTTAGTAGTTTTGCTTCTTCATGATTTAGAAAATTACCAAATTCAAGGGTGTGGAGGCGTTTTGAGACAAGTAGAATTGTGAACTTAAACTCACAATATAAGGAGCAATAACACATGAAACTGAAATTTTTTAGTGGTAAAACCCACAATCACTTTGAGCCAAACAATCTCCTAAAGTTCATTGGGCCAAATACTTTCGTATGTTTGGTTCACTATCAATCTTTCATTAACACTGAGAAGCGATGATAATTGGTAAACTCCATGAGAATCCAGTAGAAAAAGATCCAGTAAGTTAGGAATGAACATAAATGACATCATTTCATAAAAACTTCCTCTTGGGGACGCAGTGCATTACAACTTACAAGATATGCCAAGTCCGGCAATAGAAAAAAAAAAAAGACTAATATAACACAGAAAAGCGTCAAAAACGATAGTCCTATAATATGCTAAAAGACCAAAAGCCAAATACAGGTGTAAACCGTTGTTTCATCTTTCTTTAACTTCCAAGCAGCTTGTGCCAATTGCATATTCTAATGCCAGCAGTCACCATATAACTACAAGACAGTATATTACAGTATTGAACATCCCCTTACACGGTGTATGCTTGTTGGATCGTTTCAATATCGAGACCCTTCAATCTCACCACTGACTCTACATGGCCTTTCAGTGTATGGAGTTCTCTCAATCTGCAAGATTTATGAAATGAAACCAAATTGGTAATTGCAGAATGATAACTTAAACCAGCAATCAGTTTCAAATAATGTCAAACCAAAAATGATGTTTTGCAACATACCTAGCAATTTCAGCTCTCCTTTTGGCTTCTTCAGCCATGTGATTGAGTTCTGTGAAATGAGTTCTCTCGGTGAACATCTTAGTATCAGGCGGTTGCAAACCATGCAGGGTTCTTTGGGCGTGAGCCCATTGTAG

mRNA sequence

ATGAATCATAGTATAAATGTGTTGACAGAAGCTAGGAGACAAAATGATAACTTAAACCAGCAATCAGTTTCAAATAATGTCAAACCAAAAATGATGTTTTGCAACATACCTAGCAATTTCAGCTCTCCTTTTGGCTTCTTCAGCCATGTGATTGAGTTCTGTGAAATGAGTTCTCTCGGTGAACATCTTAGTATCAGGCGGTTGCAAACCATGCAGGGTTCTTTGGGCGTGAGCCCATTGTAG

Coding sequence (CDS)

ATGAATCATAGTATAAATGTGTTGACAGAAGCTAGGAGACAAAATGATAACTTAAACCAGCAATCAGTTTCAAATAATGTCAAACCAAAAATGATGTTTTGCAACATACCTAGCAATTTCAGCTCTCCTTTTGGCTTCTTCAGCCATGTGATTGAGTTCTGTGAAATGAGTTCTCTCGGTGAACATCTTAGTATCAGGCGGTTGCAAACCATGCAGGGTTCTTTGGGCGTGAGCCCATTGTAG

Protein sequence

MNHSINVLTEARRQNDNLNQQSVSNNVKPKMMFCNIPSNFSSPFGFFSHVIEFCEMSSLGEHLSIRRLQTMQGSLGVSPL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G007840.1CsGy1G007840.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G007840Cucumber (Gy14) v2cgybcgybB006
CsGy1G007840Cucumber (Gy14) v2cgybcgybB032
CsGy1G007840Cucumber (Gy14) v2cgybcgybB033
CsGy1G007840Cucurbita maxima (Rimu)cgybcmaB021
CsGy1G007840Cucurbita maxima (Rimu)cgybcmaB036
CsGy1G007840Cucurbita maxima (Rimu)cgybcmaB073
CsGy1G007840Cucurbita maxima (Rimu)cgybcmaB085
CsGy1G007840Cucurbita moschata (Rifu)cgybcmoB021
CsGy1G007840Cucurbita moschata (Rifu)cgybcmoB042
CsGy1G007840Cucurbita moschata (Rifu)cgybcmoB067
CsGy1G007840Cucurbita moschata (Rifu)cgybcmoB082
CsGy1G007840Cucurbita moschata (Rifu)cgybcmoB122
CsGy1G007840Cucurbita pepo (Zucchini)cgybcpeB018
CsGy1G007840Cucurbita pepo (Zucchini)cgybcpeB047
CsGy1G007840Cucurbita pepo (Zucchini)cgybcpeB064
CsGy1G007840Cucurbita pepo (Zucchini)cgybcpeB069
CsGy1G007840Cucurbita pepo (Zucchini)cgybcpeB105
CsGy1G007840Cucurbita pepo (Zucchini)cgybcpeB115
CsGy1G007840Cucumber (Chinese Long) v2cgybcuB001
CsGy1G007840Cucumber (Chinese Long) v2cgybcuB011
CsGy1G007840Cucumber (Chinese Long) v2cgybcuB037
CsGy1G007840Bottle gourd (USVL1VR-Ls)cgyblsiB018
CsGy1G007840Bottle gourd (USVL1VR-Ls)cgyblsiB024
CsGy1G007840Bottle gourd (USVL1VR-Ls)cgyblsiB062
CsGy1G007840Melon (DHL92) v3.5.1cgybmeB001
CsGy1G007840Melon (DHL92) v3.5.1cgybmeB003
CsGy1G007840Melon (DHL92) v3.5.1cgybmeB022
CsGy1G007840Melon (DHL92) v3.5.1cgybmeB043
CsGy1G007840Melon (DHL92) v3.5.1cgybmeB062
CsGy1G007840Melon (DHL92) v3.6.1cgybmedB020
CsGy1G007840Melon (DHL92) v3.6.1cgybmedB037
CsGy1G007840Watermelon (Charleston Gray)cgybwcgB001
CsGy1G007840Watermelon (Charleston Gray)cgybwcgB006
CsGy1G007840Watermelon (Charleston Gray)cgybwcgB020
CsGy1G007840Watermelon (Charleston Gray)cgybwcgB068
CsGy1G007840Watermelon (97103) v1cgybwmB001
CsGy1G007840Watermelon (97103) v1cgybwmB008
CsGy1G007840Watermelon (97103) v1cgybwmB035
CsGy1G007840Watermelon (97103) v1cgybwmB042
CsGy1G007840Watermelon (97103) v1cgybwmB084
CsGy1G007840Wild cucumber (PI 183967)cgybcpiB001
CsGy1G007840Wild cucumber (PI 183967)cgybcpiB010
CsGy1G007840Wild cucumber (PI 183967)cgybcpiB035
CsGy1G007840Silver-seed gourdcarcgybB0372
CsGy1G007840Silver-seed gourdcarcgybB0500
CsGy1G007840Silver-seed gourdcarcgybB0613
CsGy1G007840Silver-seed gourdcarcgybB0991
CsGy1G007840Cucumber (Chinese Long) v3cgybcucB002
CsGy1G007840Cucumber (Chinese Long) v3cgybcucB008
CsGy1G007840Cucumber (Chinese Long) v3cgybcucB043
CsGy1G007840Cucumber (Chinese Long) v3cgybcucB025
CsGy1G007840Watermelon (97103) v2cgybwmbB010
CsGy1G007840Watermelon (97103) v2cgybwmbB068
CsGy1G007840Watermelon (97103) v2cgybwmbB085
CsGy1G007840Wax gourdcgybwgoB025
CsGy1G007840Wax gourdcgybwgoB082