CsGy1G006930 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G006930
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr1 : 4440647 .. 4440943 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATAAACCAAACTCCAGGATTATCCGCCTTAATTCTGATCGCTGCCCACCCTCCTCTCGGCACCGCCACCGTGTTTCTTTCCGGTGGATCAACCAGATTATAATTCGCCGGATCCTTACCCACGTTGAAATTTCCAAATCCCCTGCCGACAACGAAGAAATTGTGCCCATGAACATGGATCGGATGATTCTCCACACTAAGAAAATTCGTGCCCTGAAACACGATTTCCAGATTTGTTCCATATGGAACCGCCAAGAGCTTTGTCCCAAATTCTGTGTTCATGTTTCTGGATAA

mRNA sequence

ATGTATAAACCAAACTCCAGGATTATCCGCCTTAATTCTGATCGCTGCCCACCCTCCTCTCGGCACCGCCACCGTGTTTCTTTCCGGTGGATCAACCAGATTATAATTCGCCGGATCCTTACCCACGTTGAAATTTCCAAATCCCCTGCCGACAACGAAGAAATTGTGCCCATGAACATGGATCGGATGATTCTCCACACTAAGAAAATTCGTGCCCTGAAACACGATTTCCAGATTTGTTCCATATGGAACCGCCAAGAGCTTTGTCCCAAATTCTGTGTTCATGTTTCTGGATAA

Coding sequence (CDS)

ATGTATAAACCAAACTCCAGGATTATCCGCCTTAATTCTGATCGCTGCCCACCCTCCTCTCGGCACCGCCACCGTGTTTCTTTCCGGTGGATCAACCAGATTATAATTCGCCGGATCCTTACCCACGTTGAAATTTCCAAATCCCCTGCCGACAACGAAGAAATTGTGCCCATGAACATGGATCGGATGATTCTCCACACTAAGAAAATTCGTGCCCTGAAACACGATTTCCAGATTTGTTCCATATGGAACCGCCAAGAGCTTTGTCCCAAATTCTGTGTTCATGTTTCTGGATAA

Protein sequence

MYKPNSRIIRLNSDRCPPSSRHRHRVSFRWINQIIIRRILTHVEISKSPADNEEIVPMNMDRMILHTKKIRALKHDFQICSIWNRQELCPKFCVHVSG
Homology
[Close]
BLAST of CsGy1G006930 vs. TrEMBL
Match: tr|A0A1D5Z962|A0A1D5Z962_WHEAT (Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.8e-04
Identity = 22/76 (28.95%), Postives = 48/76 (63.16%), Query Frame = 0 

Query: 1   MYKPNSRIIRLNSDRCPPSSRHRHRVSFRWINQIIIRRILTHVEISKSPADNEEIVPMNM 60
           +++P+  ++    D  PP  R  HRV   W+ Q+ +  + + +E++++ +++EE+V M +
Sbjct: 37  VHQPHPGVVGDEPDDSPPIHRDAHRVPHWWVVQVELCGVGSGIEVAEALSEDEEVVAMGV 96

Query: 61  DRMILHTKKIRALKHD 77
           DR++L  + + AL+HD
Sbjct: 97  DRVVLPGEDVGALEHD 112

The following BLAST results are available for this feature:
BLAST of CsGy1G006930 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsGy1G006930 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G006930 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G006930 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1D5Z962|A0A1D5Z962_WHEAT6.8e-0428.95Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G006930.1CsGy1G006930.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G006930ClCG04G010730Watermelon (Charleston Gray)cgybwcgB053
CsGy1G006930CmaCh18G000640Cucurbita maxima (Rimu)cgybcmaB085
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G006930Wax gourdcgybwgoB025
CsGy1G006930Wax gourdcgybwgoB090
CsGy1G006930Cucumber (Gy14) v2cgybcgybB002
CsGy1G006930Cucurbita maxima (Rimu)cgybcmaB030
CsGy1G006930Cucurbita maxima (Rimu)cgybcmaB073
CsGy1G006930Cucurbita moschata (Rifu)cgybcmoB029
CsGy1G006930Cucurbita moschata (Rifu)cgybcmoB067
CsGy1G006930Cucurbita moschata (Rifu)cgybcmoB082
CsGy1G006930Cucurbita pepo (Zucchini)cgybcpeB018
CsGy1G006930Cucurbita pepo (Zucchini)cgybcpeB069
CsGy1G006930Cucurbita pepo (Zucchini)cgybcpeB128
CsGy1G006930Cucumber (Chinese Long) v2cgybcuB001
CsGy1G006930Bottle gourd (USVL1VR-Ls)cgyblsiB018
CsGy1G006930Bottle gourd (USVL1VR-Ls)cgyblsiB069
CsGy1G006930Melon (DHL92) v3.5.1cgybmeB022
CsGy1G006930Melon (DHL92) v3.5.1cgybmeB052
CsGy1G006930Melon (DHL92) v3.6.1cgybmedB020
CsGy1G006930Melon (DHL92) v3.6.1cgybmedB046
CsGy1G006930Watermelon (Charleston Gray)cgybwcgB080
CsGy1G006930Watermelon (97103) v1cgybwmB064
CsGy1G006930Watermelon (97103) v1cgybwmB096
CsGy1G006930Wild cucumber (PI 183967)cgybcpiB001
CsGy1G006930Wild cucumber (PI 183967)cgybcpiB005
CsGy1G006930Silver-seed gourdcarcgybB0393
CsGy1G006930Silver-seed gourdcarcgybB0595
CsGy1G006930Cucumber (Chinese Long) v3cgybcucB002
CsGy1G006930Cucumber (Chinese Long) v3cgybcucB003
CsGy1G006930Watermelon (97103) v2cgybwmbB053
CsGy1G006930Watermelon (97103) v2cgybwmbB078