CsGy1G006670 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCCTCTCCTAAATTATTTCAAAACCCATATTTCTGTTCCTCAAAATTGAGTCCCAGATCCTTTCCATTTCTTCTTTCATGTGATGGAGACCGTGAAACCATAGAAATTGAGGGAGCAGAGTACCAACTCCTGGGTCATAGTAAATTTGATCGAACTTTTATAGTTGCTGAAAATGGTTTTTCAGATCGATTTTGTTCACCAGATAAAAATATTTCGTCGAGTTCCATGTATTTGACAATTTCTTTATATTCTGACTGTGAGTCTGTACCACCATACACCCCTGCTTGTTCTGAAGCTGCATATAGCTACATCCCAGAACAAAGTAACGTAGTTCTGATGAATGGTATGTGTTGGATAAGTGTAGTAGCGCCAATTCCACAATGGTTGCTAAAACAAGTTGGTGATGATTTTCAAAAGGTAGCGCAACATATCACCGCTCAGTTTACGTCAGGGCGGACGGTAAATGTTCAAGTATGTAACAATTGCAAAGATTCTGGTGGTGGTGGTGTTTATGTTTATGACTTGGAATTGAATCAATCAAGATGCTGCTGTCAATCTTCCTTTGATAGGATTGAATTCTGTTCTTCCTCACTACTTGCAGCAACACCACGACCTTCTCCATCCAGATCGGGTATATATTTATTTAGCCCTCCAACAATAATGTGAGGATGGTGAGAGAGAATTATTTATTTAAACTTTAACATACAATACAATTTCAACTCCTTTTTCAATGATTCACTACTTAGTTCAGGACTTGTCTGTGATTTTCTTCCCCTTCTTTTTTGAGTTCATATTTCTCCATGTTTTGTCTGAGCAGGAATGTCAAATACGTCAACAGAAGCACCTTCTCCAGACAAGGATGAAAATATCGCTCCGTATGCAAATATCAGTAAGTCATTTTTACAGAATTTAGAAAAAAAGTTATCAGGAATATAACCAAAATTCATAAATGTTGTGAAAATAACATAATTACTATTGTTGCGTACATATTGACCATGTTCGACTCTTCAAATTCATCCCCTCCATACTTGAAACAAGTGAGTTTAACATCGTTCAAACCATCATCAAGTGTGTATCTTTTATGAAGGAAAGGTATTTCTATAGCTCCACTAGCTTTGTTGAAACAAGTTGTTGTGATGCTTCTATGCTAGAATATGAAGAGGAAGAATGTTGGGGATGCTCAAAGGTTGGAGGTCCAAACAAGTTGGGTTTTGGTGGAATCTGTAAGCCATCAACACTGCCTTCCAACATTGCAATAACATCGGTCATCGACGGCCTGTCGTTGGGCAATGATTGAATACAATGTAGTCCTACGATTATCATTTTTCTTGTCATCTCTTTTTCTTCCTCTGTGTTTCCCCACAAACAGCCATCATCTATTTCACTTTGTGTAAGATCCTTATATATCCAATCAGGAAAGAACACTTCACTGTTTTGCCCCACTCCATCATTTGGATTCTTTCTTGCTCCCACCATTTCAAGAGCTAACATTCCATAGCTATATACATCAGACTTGTGAGATACATTACCAATGTTTCTGAATATTACTTCAGGTGCAATAAATCCTACTCTCCCTTTCACGCCTGTCATCGTTACATGACTTTCTCCGGCCTTCCATTGCTTGGCTAGCCCAAAGTCCGAGATCTTGGGACAAAAATCACTATCCAAAAGTATGTTATGTGGTTTAATGTCAAAATGCAAAATCCTTGTGTTACAACCACGATGCAAGTACTCTAAGCCTCGAGCCACACCAATAACAATCCTATATAATGTGTTCCAATCCAACTTGTCATCGCTTTCCTGCGGCCCTTTGTGAGATATATATTTGTCTAATGACCCTCTAGACATATATTCATAAATTAAAGCTCTTTTCTTCCTCTCGTAGCAGAAACCTAAGATTGAGACTATATTTACGTGCGAAGTTCTTGTGATGTTAACCACTTCATTGATAAAATCTTGTCCATTTTCACTGGACTTGTTCAAAAGTTTCACAGCCACATCACGTCCGTTAGGTAGCTTTCCTTTGTAGACAGTGCTAAATCCTCCTTGACCAAGTTTGTTCTTCTTGAAGGAGTTCGTGATTTTCTTCAGCTTTGAGTAACTATATCGCTTGGGAGTTTGTGTAGAATATCTCCTTATACTTTCCTCAATTATTTTATCTTTGTTTGATATGCTTTTTATTGTGCAGTAGATGCACATGCTGATGCAGATGCAGATGCAGATGATGATTATAAAGATTGTCAGAATGATGGATATGGAAACTCCAACTGA ATGTCTTCCTCTCCTAAATTATTTCAAAACCCATATTTCTGTTCCTCAAAATTGAGTCCCAGATCCTTTCCATTTCTTCTTTCATGTGATGGAGACCGTGAAACCATAGAAATTGAGGGAGCAGAGTACCAACTCCTGGGTCATAGTAAATTTGATCGAACTTTTATAGTTGCTGAAAATGGTTTTTCAGATCGATTTTGTTCACCAGATAAAAATATTTCGTCGAGTTCCATGTATTTGACAATTTCTTTATATTCTGACTGTGAGTCTGTACCACCATACACCCCTGCTTGTTCTGAAGCTGCATATAGCTACATCCCAGAACAAAGTAACGTAGTTCTGATGAATGGTATGTGTTGGATAAGTGTAGTAGCGCCAATTCCACAATGGTTGCTAAAACAAGTTGGTGATGATTTTCAAAAGGTAGCGCAACATATCACCGCTCAGTTTACGTCAGGGCGGACGGTAAATGTTCAAGTATGTAACAATTGCAAAGATTCTGGTGGTGGTGGTGTTTATGTTTATGACTTGGAATTGAATCAATCAAGATGCTGCTGTCAATCTTCCTTTGATAGGATTGAATTCTGTTCTTCCTCACTACTTGCAGCAACACCACGACCTTCTCCATCCAGATCGGGAATGTCAAATACGTCAACAGAAGCACCTTCTCCAGACAAGGATGAAAATATCGCTCCGTATGCAAATATCATAGATGCACATGCTGATGCAGATGCAGATGCAGATGATGATTATAAAGATTGTCAGAATGATGGATATGGAAACTCCAACTGA ATGTCTTCCTCTCCTAAATTATTTCAAAACCCATATTTCTGTTCCTCAAAATTGAGTCCCAGATCCTTTCCATTTCTTCTTTCATGTGATGGAGACCGTGAAACCATAGAAATTGAGGGAGCAGAGTACCAACTCCTGGGTCATAGTAAATTTGATCGAACTTTTATAGTTGCTGAAAATGGTTTTTCAGATCGATTTTGTTCACCAGATAAAAATATTTCGTCGAGTTCCATGTATTTGACAATTTCTTTATATTCTGACTGTGAGTCTGTACCACCATACACCCCTGCTTGTTCTGAAGCTGCATATAGCTACATCCCAGAACAAAGTAACGTAGTTCTGATGAATGGTATGTGTTGGATAAGTGTAGTAGCGCCAATTCCACAATGGTTGCTAAAACAAGTTGGTGATGATTTTCAAAAGGTAGCGCAACATATCACCGCTCAGTTTACGTCAGGGCGGACGGTAAATGTTCAAGTATGTAACAATTGCAAAGATTCTGGTGGTGGTGGTGTTTATGTTTATGACTTGGAATTGAATCAATCAAGATGCTGCTGTCAATCTTCCTTTGATAGGATTGAATTCTGTTCTTCCTCACTACTTGCAGCAACACCACGACCTTCTCCATCCAGATCGGGAATGTCAAATACGTCAACAGAAGCACCTTCTCCAGACAAGGATGAAAATATCGCTCCGTATGCAAATATCATAGATGCACATGCTGATGCAGATGCAGATGCAGATGATGATTATAAAGATTGTCAGAATGATGGATATGGAAACTCCAACTGA MSSSPKLFQNPYFCSSKLSPRSFPFLLSCDGDRETIEIEGAEYQLLGHSKFDRTFIVAENGFSDRFCSPDKNISSSSMYLTISLYSDCESVPPYTPACSEAAYSYIPEQSNVVLMNGMCWISVVAPIPQWLLKQVGDDFQKVAQHITAQFTSGRTVNVQVCNNCKDSGGGGVYVYDLELNQSRCCCQSSFDRIEFCSSSLLAATPRPSPSRSGMSNTSTEAPSPDKDENIAPYANIIDAHADADADADDDYKDCQNDGYGNSN
BLAST of CsGy1G006670 vs. NCBI nr
Match: XP_016899459.1 (PREDICTED: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 isoform X1 [Cucumis melo]) HSP 1 Score: 185.7 bits (470), Expect = 2.1e-43 Identity = 98/177 (55.37%), Postives = 120/177 (67.80%), Query Frame = 0
BLAST of CsGy1G006670 vs. NCBI nr
Match: KGN63134.1 (hypothetical protein Csa_2G404850 [Cucumis sativus]) HSP 1 Score: 140.2 bits (352), Expect = 1.0e-29 Identity = 77/176 (43.75%), Postives = 103/176 (58.52%), Query Frame = 0
BLAST of CsGy1G006670 vs. NCBI nr
Match: XP_011649927.1 (PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X2 [Cucumis sativus]) HSP 1 Score: 140.2 bits (352), Expect = 1.0e-29 Identity = 77/176 (43.75%), Postives = 103/176 (58.52%), Query Frame = 0
BLAST of CsGy1G006670 vs. NCBI nr
Match: XP_022133890.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 isoform X2 [Momordica charantia]) HSP 1 Score: 117.5 bits (293), Expect = 7.0e-23 Identity = 76/177 (42.94%), Postives = 96/177 (54.24%), Query Frame = 0
BLAST of CsGy1G006670 vs. NCBI nr
Match: XP_022137292.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111008789 [Momordica charantia]) HSP 1 Score: 116.3 bits (290), Expect = 1.6e-22 Identity = 70/174 (40.23%), Postives = 96/174 (55.17%), Query Frame = 0
BLAST of CsGy1G006670 vs. TrEMBL
Match: tr|A0A1S4DTZ4|A0A1S4DTZ4_CUCME (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485709 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 1.4e-43 Identity = 98/177 (55.37%), Postives = 120/177 (67.80%), Query Frame = 0
BLAST of CsGy1G006670 vs. TrEMBL
Match: tr|A0A0A0LQ35|A0A0A0LQ35_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404850 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 6.7e-30 Identity = 77/176 (43.75%), Postives = 103/176 (58.52%), Query Frame = 0
BLAST of CsGy1G006670 vs. TrEMBL
Match: tr|A0A0A0LQE7|A0A0A0LQE7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042470 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 8.8e-06 Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |