CsGy1G004980 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G004980
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	tetratricopeptide repeat protein 1
Location	Chr1 : 3375110 .. 3384542 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAATGAAAGATGTATTAAATTGTAAGATCTCTCTTGCTCATGCAAAGCCAAACACTGATAAAATGATAAAATGAAACGTGGAGGGGCGCGCGCGCGCGCTGACAGTAATAAAAGCGAAAGAAAGAACTAAAACAAAAAAAATACCAAAAGCAAAGGGATAGAAAGGGGGAATGAAAGGAAGTGTGTGTTTCCTCTGCGGTTCTCTCCCATTTCTTCCAAATCCAAACTACAACTCTTTCTCTTCTTCCTCCGATTCCATTTCTAAACGTAGCTTGATTCATGCTCAAACTCATCACCAAGAGATTCGCGTTTGCACCAATCGTACTTGCCGTCGTCAAGGTTCCTTTCACGCTCTCGAAATTCTCAACGCCCTAGCACCTCCCAACATTGTCGTCAATCCCTCCGGTTGTTTAGGAAAGTGTGGCGCTGGCCCTAATGTTGCTGTTTTGCCCGATGGATTCGTCGTCGGCCATTGTGGCACACCTGCTCGGGCTGCCGATCTTATCATTCAATTATCTGGTCAAGACTCAGATTCTGTTGGTATCTCCAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCTGAGCTACTTCTTTCGCAGGTATTTTGTTCTGTGATATGATATTGATATTGTTCATGCGTAGTTTTTCACTCTTCGGTCTGAGAATTCTGTTCTGATCAATACATTATGTATGATGTCCTGCTTCAATTTGTTGCAGGCGATAGATTTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTGTTCTACTCATAGTTCTATGTTCTATCATATTATATATAATCGTGTGCTATCTGTCCCCTCTTATACTAAGTTTGGTAACTATAATTGAACTTATGGCGGTAAACACTGACAATTATTGTTACTCGTCGATTTATCCTGCATGTTTCTAGCATTTGTATATTTCTGGACTTAAAAAATTGTTTGTAAATGTATTTGCTAAAGCAGATGCATCCAGAAAATATAGTTTCACAGAACTAGTAAATTTTCAGGTCCATCGTAAGATTGGCACTGGGGAATCACTCTGGCGCCCTTGAAGATGCAAATGAAGCTCTAAGAGTAGCTCCTCAATATCTAGAGGTGAGAAGTATTTTATATATTCATTGTGTGCATTACATTTCATCTAAAAAAATTAGACGGTGGTTTCGAGAAAATAACTAGGCTGTTTACACTTCAACGAGTCTGGGTTGTGAATATAATCATTACTGAAGAGACATTGTTTGGAACTACCAACTGCGGAGAGTACCTCAATATTTTCTACAAGGTTTTTTACTTATATTCCTATCTCTTCCACTCCAAATGTTTTTAAGCAGATTTGCGTAGCACTAAACTTTAAGTGTCGACTAAAAGAAAATTTGGAGGTTAACAGGGAAATTTTGGACGTGAACAAAAATTATTATTCGGGGATCAATATTTTGTTAGGCTACCTGAGTCTTTGTGCTGCTTGAATCTTTACATGTTAATATTATAATTGAATGCTAAGAAACAGTAATTGCGGTGGACAAGGTTAAAGAAGAAAAAGGAAAATAAATAGAAATCTTAGTTGAAAAGTCAAAAGACTGATGATGCTCAACTCTAATTTAGAGGTCCTTCAAACATGCAACCAACTAGTAGAACATGCAATCCTTTTGAGACAATTACAAATTCTTATCCTTCAATTGAAAAGATGTGAGAAGAAATGATTCTTGCTCTAGAGTAGATTATCGTATTATTCCTGGGATGCATTTCTTAATTTCAATTTGCAGGCTTACATTTGCCAAGGGGACGCATTTTTAGCTATGGACCATTTTGACTCGGCTGAGATATCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGTCGTTCAAAGTCATTCAAGGTATTGATTCACTTATCTTTATATGAGCATACTATGGACAATTTCATCACTGGGACAAAAGAGACTCACTTTAACCAACTAATTTTCAGCATATTTGCTCCCCAACCAAGGATTTTATTTATTTATTTTATTAACTTTTGGTTTATAGGAAGCACCCAGAACCATATTTAAGATGGTTTACCATTGAAATGTTGGTTGGGATTGGCTGAAAGAATTTTGGAGCTATTTTCTGCTTTTGAGGACAAAATTCAATAATTTATTAATTAGCTTTAAAAAAACTGTTCTCAAAATGTTGTTGACACTAATGACCGGTTTGTACCCGAGAACAACTTACTTTCTTCTTATAATAACCGTAAACAAAACTGTTTCTGAAAACAGTTTCCCAGACAAGAGTATTCATTTATGATCTTCTTTTAAATTCTTTTGATCCCAAACCGGGCACAGTTTCTGAAGTGTTTGCTATCAAATTTTCTCAATTAACACTTTCAATCATAAGATTTGTACCCTTTTGGAGTGATCCGTCCTTGTAATTTTACAAAATGGCATAAAGAAGTCAGTTTTTGTCTAGTGCTGCTGGAATGCCTGTTTGGGAGAAGGTTACATTTTAATATTTCACCGCCATTTCTTCAATAGGCGCGAGTTGCTAAACTTCAGGAGAAGCTCAGTGCTGTGAGAACACAATAAACCTGAGATGTAGGTCAAGGAAGAAAGGTAACTAATGAAAACAGTTCGAGACTCTGTCATTCCTTCAGGTTGTTTCCAGGTTTCAAATTTCTGACTCAGTTTGCCTTTGAAATTCTCATTAGATTAAATACATATAAATTTGATACTATTTTGGAGTTCAATGGAAATCTGAATAATTTGTATAATCTACATGAAAATGATTTTAATATCAGGGAAAATAGGCGAAGAAAAGCATCAGATAGTAAATGTTTGAAGAAAAAGTACTGATCATAGTTCAGAAATGTTCGGATGGATTATATAGTGTCTTTGGGCTTATAAAATTCACTTCAAAGTTTGAATGCAATAAAAATAATCTGGAGATTAATAATTTTAAGAATCTTCTGGCATTAGATAATTCTTAATCATTTTAATGTTGGAGGAAAAAACATTGCAAATTTCGCAGTCTCATAAACATTAGTCTTAGAGCACGCGTTCACATGGTGAAAGTGATTGCTGACATGAAGAGGAGGATGGAGATCTAGGTTGGGGATTTTGACTTTTGCTTGTATTTAGTTATTAATATGATTGTCGCAGGCATGAATTAGTATAGTAGCCAAACACACTAAAATGTTTGCATTAATTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCAATTTCTGACATGGTTAGACATGACTTTAACCCAAAACTTATGATTTTTTCTTCTTAAAATTTCATTACATATTGATAAATCCTAAAGTAGTATTAGGAATTTAGGATGATATCTTCATCCTCTAGTCTTAACTAATTAAATAATTTTATATCTTGTAAGATTTCAAATATCATTGATTGAATGTTTTTACTGAAGTACATCTTGTTTTTATGTTAAGTTTACAAGCTTTAGTATTAATATATCAATATAGGCACATCAGGTCGTCTGGTCCACTTAGCAGAGTTAATATGATGAAAATATTATGTTTATATTTTGAATGTAGGATTGTAAGATGGAATTCTTTGTGATAAATGTAAAAAGTGGAGAAAAAGGGAAATATAAAGTTACTTTATAAGTGTAAAAAGTAGAAATAACGAGGAGGGTGGAGTTCCTCGATAAATATGAAAGTAGAGAGAAAGAGGAATATGACGTTACTGAATAAGGGAGGAAAGTTCAATAGTGTTCACTATCGAAGTTGTGTTTAACAACCAACTTAAGAAATGGGTGAGCTACGGTTTAGTCAACCCCATAATATGTGTCTCTAACATGTACATGTTCTACTTTTAAAGAAATTGATGTGTCATAATGTCCGTGTAGGTGTGCTTCTCATGCTGGAATAACATACTGTTAAGTATTAACTCCAAGAAACCTCTTTGGGAAATTTATTTTTCAAGTAAGTGAATCTATTTTATTTTGGAGAAGTGCCTCTTTGGTAGATATGCTGTCCCAAAGTTTTAATTTAGCCAACATCTCTCAGTGTTGAAAAATAGGTTTCAAATGTCTCAACGACATTAATTAGGTTCTTTAATTATTATTTAAAACATTTTTAAACTTAAAAAAAATATTTCTCTCTTCCTTTCAACACTATATGCTTTTTAATTCATTCAGAAAAATACTAACTAAGATTAACAGAATCAAAATGAATGGGAAATAGATTAGGGAATCAATGTTGAAGGCATATTTGTTGTTATGTTATGATTTTGAATCCCCTTGTCATTTGTTTGTTGGCTTTCAATGATGGAGTTTCTCACCGGTCTGGGATCAAAGTTTTTAAAACTTTGTGGGTAGATCTTAGAACTCAGACCAAATCATTTTCTTCCTCTTCATTTGTTTCGCTCCAACTGGTTTGGCCAAAAGACTAAAAGAAGTATTTTCCCTAAGTTTTTTTCATTGGTACCTATCCTGATCTGGATCCATTATAATATCTATTCTTGTTGTCTTTTCTACCTGGAATGTTTGCTCCACAAGTAGACAAAGAAAAAAGAATAGAAAAACCCTCCATGATTAGGAAGCTTTATACATTCTCCATTCCTTTCCTTGATAATATTCTTTTCTTCTGATGGGGTAGATTTTGAAAGTGATTCATTGAGGTTTTTGCCATTGAAATCTCCTTGACCTGCCGGATATTAATGCATTTTATAAATATTTTTTAAGGTTTAGAAGTCTATTTGGATCGACTCCCTAAGAGCTTAGGAATGTAAAAAAAAAAACGTTATTAGTGTCATTGCAAATAAGTTGGTTGAGAGTTACTTACCTTATCTAATCACTATTATTGTTCCATAAGATTATTGCTTGTATGGATATTACCTTATCTAACGCTTGTATGGATGGTAAAGTTAGCTTATAGGTATTTAGTAATGTGTGCCTGAAATTCAGCGCATTTAATGACAGGTTTTGTTGATTAAAATAATTGTCAGCTTTATCTAAAGCACAACCAAAATTATTATAAGCAAAAACATGAGCCACTTAAAATTATTGGAGAGATGTATTTGTATTGTAACTGGAAACTTTACCCAATTGTACATAATTAGTTTGGTGTTATAGTGCATTTATGAAGCTGTTGATTGAATATGTTTGGGAGGATAAACCGACTCATTCCACTAGTTACATCACAGCTAAAAACAGAAAAACTTGAAAACTATTTCATACCGCTTTCTAATACTAAGGGATTAGTGTCCATCCAATGTCACAGATGTCAATAAAGATATACTTTTACCAAAGTTATTTATAGGGGGGACTGGCTTAAATCTTAACACTGCTACGAACCCACTACCCTAAATATCTCTAGTTAGGTACGGCTTTCCCAAAATGAAAAATAGGAATTGCTAAGTAGGATTGGTGCTGTGACCACACAAAAACATGTCCATGCTCTTCACCTTTGCCCACCACTTGTAACTCTTCTTTCCGCTGCTTTTTGTTTTTCCAATGACACCAACATTCCTCTTTGATTTTAGTCTTCCGATTTGAAAGCATGCCTCCAATGTTACCTCTTTCCCATTGCTGCATCTACTCTCTACCATTGCTTTATCTGTTTTCACAAGCTGATCATAGTACTCTTTATTCCTTTTCTCCAGCCCATAGATCTGACCTTGAAGATCTTCAATTTTCTGGTTAAGTAGGTATACCCTATGATCATCTCTCAGCTTCAGCATACATCGCGCCATCTCGCCTGCCTTCTGTTTCATAAAAACAGACTCTGCTACCAACCCCTTGTTTTCCTCCATCAATGATTCCACCCTATATCCCAATCTTGCATTTTCATTCAGTAATATCAGCCTCTCAGACTCCAACACATCAAGCAAACTCTTCTGAAGCTCAATCTTTCTTGACGAATCACAGCATTGCTTTTCCAGGGTGGTTACCTCATTTGTAAGAATGTCGTACTCCACATTCTTCATCACAAGCTCAGCGATAAAAGCATCGTTGTCTACCATGCCATAGTATTTAGTTGATGTTACAGATACTTGTTGGTAGGACAGAGAGCTCTCGGCATCAGACTCGATCTGACTGATTCCTGAATCTTCAGCTCCATCAAAAGAGTCGAGGGTTGAAGTAACAGAAAACTGTCTATTGTGATGTTTTGCAACAGTTTGGATGTAGCGATCTGATAAGGTGGTGTATGCAGTGTACAGTTCTTGGAGAAGTGCCAGCAGTTGAGGACGTTTGTTGTAGTAAAATTCTGCACGTTCAGCAAAAGAGTCCCCAACATTGTCCTCTTCAGCATTTTTCATAGCAAGTAAACTGATCCTCTGCTCCATTTCTGCCATAGGACATTATGTTTCAAGACAACTTAAATTTAAAAGCCAAAGAAATAAGAAAACCACATTTTGTAGGCGCATCATTTTGGCTTAAAATAATAATGATGAATTGCACGAACTGTTGCTTTTAATTGATTACACATATAAGATGTTATTTGACAGTTTTTAGACTATAAATTGCCAATGGATATCAAATAATACATTCAAAAGAAGAAGAGTTCAAAATTTCAAATTCCAGATAATGCCAAAAATATAGACCCAACGGATCCGTGACTTACCAGGGCCAGTAGCTTATTTTGGTTCAAGAAGGGGAGAATAATCTAAGATGGGACCTATGGGACACTATGTAATTGAGATTCAATAAGACAACATAATATTCCAAAATCTGTTGATGTGACATAACATATTTCAAAAACGAACTAATGATATTAGCTATAATTTTATAAAAAAAGTACATAATAACTTCGTTTATTTTTCTTTTAAATTCCCATTTTCTTTTAAATATTTATAAATATTCACGAGGATGGCAATTGAATCTCGGGACAAATTCTATCTTAAAAGTTTTGAATTCCTGTCAAATCGTGGGGCAGAAGGTATGGTTCCCCGCCCTACATTTAAATTCTATTAAAATATTTTGAATGAAACTTATAATTCCAATTCAAAATGTTATAAAGTTGGGACGACTCAAGATAATTTGAATAAAATTCCTGAAAGAGATAACAAAATGGCAAAACCTCCCAACAAATGGAAAAAGAAATGGGTATAAGGTTCACAAATTTCAAAGCCATCACGGGTTTGCATCAATCAGGCAAATAATAAGATGCTCTTTACAGGAAAGTTGTTGAGGACTGCACATCGGTCAGGGATGAAAGAACAGAAAGGTCGCTGTTACGAATATCAAGAAAGAGTTCATACATACACACACTCTCTCACAAGAAAGGTGTGTAGGATGGGGGTTGGTTTCCCTTCTCATAAGTTAGTTTAGGAGTTTCAAATTTTAAAATAAAGTTGGAACAAAATAGCATGGTGAAGGAAATTCAAAGTCGAACCTGGACCGACCAACTTCAGACTCCCTCAGACTAGTCTTACTTCAAACCACCTACCCTTCCAAACTGCAATAAATTTTTCTACATGTATACGCAATCAATCATCAGTCGGTAGGTAAGTTTTTTCCACAGGCTAAGTTTACTCCCTCACCCCTACCCCTCTCTGGTCCTCCTTGGTATTATGGAAAACAAACGAGAAAAACAAAAATTAAAATACAGTAAATTGAGTTTCAAGTCAACAATTAGCATTACCTGCGAGAGAAGAAGATAACGTTGAAGAATGCTTGGTGCTGAGTGTTACACTGTTTCTGTTGCTGCTGAAAGTATCGCAAGATGGAGATGAAGATGTTCGATTGATTGAAACCTCTTCTTCCTCCGGGGCCGCCATTGCTATCTAAACGTTAGCCTGTTAAGCTGCGCAATGCAATCTCCACTCTACTCTTTTCAAGTGCCTCTCCTCACTCAAAGTGCATCAACCACAGGAACACTCGCAGCTGACAACACGGTTTTGTGTTAACCATCCGACAAAAATATGTGCAGAACCACTACTTCAGAACGACCATACAGAAAAAGCAATACATATTTTCCACATATCAGTTAATATTAATTAAAAATTAAGGACAAAGATGAGCAACGCATGATTTAATCATCTGAAGGCACACTAGCATACATATTTAATTCTTGGGAACATCCACTTCAAGACCACATTGCAACACATGTGCCATCATTATCAACACTTTAAAGTATTGTTGTGAAAGACAATTGAAAACTTTATTTTAAACTCTAACATAGAATTTATCTTGCAATCAGAAATTAAGTAATTCGAAAAAATGGTTGGACAAATAAAGATCATTTATGTTGCAATTTTATTGAATGTCAGGAGTAATGATGGTAAGCTTCCAATTAAAAAGGCATGGCCCATAAAGTCCTTGGGGGCAGGCAAGTAGGAAAGCTCAGAATCCAATAAAATCCAATGCAATAAAAGCAGCAAACCGTACAAAAAACCTAACTATTGCATTTAGAATAGAAAAATAATAAACAGTGTAGTATGGGCAACAAATTGGAAAATAATTTTTCGTAAAAGAGTTGGCGCAGATCTCGAAAAGTTTCATCAAAATATAAACAAAGTGCAAATCAAATCACAAAGCCTGTCTCAATATTCATGGTACCAGAAGCTGCGAAAACCGTATTTACTCAAATCCCCAGGCTCATTTTATAATGCTTCCACATTTTGTTTACTTCAATCCTTTCCTAAGGCAATGGATCACCACAACAAAATCTGAGAGCATTTGGAGCTAACCTGTACTTAGGGCTAAAACATGTAAAATATATTCCGAAGATTGAGTAACTACTGCGATTCAATTGAAGTGAGGAGACAGAAGATAAGAGGAGAAGCGCTTTCTTATGATTATTTGGAAGCTAAGGAAAGATGAAAACGGAGAGAGAGAGAGAGAGATCAGCGAGAGAAGACGTTCCGATTATTGGAACCGACATTCTCGTTTTCAGATGGTAATTGCAGAAGATTAAACGCTAGTGCACTCTAAACTACACAGAACTAGCATAAACTTCAAATTACAATGCCAGGAAAGTAAATTTTCACAAACAAATTAAAAGCAAGTCGTATAGAAGACAGGCAACGCTGATGTTTCATCTTCTTAGCAACCAAAGAGGATGAACATCAGTGAAAAACAGTGAACAGAAGAATAGTCTAACAGGTAAACGAATACACAAAAATAACAGTAGATGATTCGATTCATAAGAAAACAAGTAGAGAAGAATCCATGAAAATTACCTACAGCTTGTGAATCAAAATGCGGCAAAGGAAATCCGAGAGAGAGAAATGGAGGTTGAGGGTTTTGATCGAAATTGTATGTTTAAAATTTGAAGAGATTACGCATTTAACGAGGAAAAAAAGAAACGAACCAAAAAGAGAAAGAGAGAGAGAGAGAAAGAGAGAGTAGGGATCAGGTTTTTTTCCATTTGAACGATACTTCACAGTTCACATAATAAAGTGGTTTTCTTCTTTCCCATTACCTTCAATTTTTT

mRNA sequence

GAAAATGAAAGATGTATTAAATTGTAAGATCTCTCTTGCTCATGCAAAGCCAAACACTGATAAAATGATAAAATGAAACGTGGAGGGGCGCGCGCGCGCGCTGACAGTAATAAAAGCGAAAGAAAGAACTAAAACAAAAAAAATACCAAAAGCAAAGGGATAGAAAGGGGGAATGAAAGGAAGTGTGTGTTTCCTCTGCGGTTCTCTCCCATTTCTTCCAAATCCAAACTACAACTCTTTCTCTTCTTCCTCCGATTCCATTTCTAAACGTAGCTTGATTCATGCTCAAACTCATCACCAAGAGATTCGCGTTTGCACCAATCGTACTTGCCGTCGTCAAGGTTCCTTTCACGCTCTCGAAATTCTCAACGCCCTAGCACCTCCCAACATTGTCGTCAATCCCTCCGGTTGTTTAGGAAAGTGTGGCGCTGGCCCTAATGTTGCTGTTTTGCCCGATGGATTCGTCGTCGGCCATTGTGGCACACCTGCTCGGGCTGCCGATCTTATCATTCAATTATCTGGTCAAGACTCAGATTCTGTTGGTATCTCCAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCTGAGCTACTTCTTTCGCAGGCGATAGATTTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTCCATCGTAAGATTGGCACTGGGGAATCACTCTGGCGCCCTTGAAGATGCAAATGAAGCTCTAAGAGTAGCTCCTCAATATCTAGAGGCTTACATTTGCCAAGGGGACGCATTTTTAGCTATGGACCATTTTGACTCGGCTGAGATATCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGTCGTTCAAAGTCATTCAAGGCGCGAGTTGCTAAACTTCAGGAGAAGCTCAGTGCTGTGAGAACACAATAAACCTGAGATGTAGGTCAAGGAAGAAAGGTGTGCTTCTCATGCTGGAATAACATACTGTTAAGTATTAACTCCAAGAAACCTCTTTGGGAAATTTATTTTTCAAGTAAGTGAATCTATTTTATTTTGGAGAAGTGCCTCTTTGGTAGATATGCTGTCCCAAAGTTTTAATTTAGCCAACATCTCTCAGTGTTGAAAAATAGGTTTCAAATGTCTCAACGACATTAATTAGGTTCTTTAATTATTATTTAAAACATTTTTAAACTTAAAAAAAATATTTCTCTCTTCCTTTCAACACTATATGCTTTTTAATTCATTCAGAAAAATACTAACTAAGATTAACAGAATCAAAATGAATGGGAAATAGATTAGGGAATCAATGTTGAAGGCATATTTGTTGTTATGTTATGATTTTGAATCCCCTTGTCATTTGTTTGTTGGCTTTCAATGATGGAGTTTCTCACCGGTCTGGGATCAAAGTTTTTAAAACTTTGTGGGTAGATCTTAGAACTCAGACCAAATCATTTTCTTCCTCTTCATTTGTTTCGCTCCAACTGGTTTGGCCAAAAGACTAAAAGAAGTATTTTCCCTAAGTTTTTTTCATTGGTACCTATCCTGATCTGGATCCATTATAATATCTATTCTTGTTGTCTTTTCTACCTGGAATGTTTGCTCCACAAGTAGACAAAGAAAAAAGAATAGAAAAACCCTCCATGATTAGGAAGCTTTATACATTCTCCATTCCTTTCCTTGATAATATTCTTTTCTTCTGATGGGGTAGATTTTGAAAGTGATTCATTGAGGTTTTTGCCATTGAAATCTCCTTGACCTGCCGGATATTAATGCATTTTATAAATATTTTTTAAGGTTTAGAAGTCTATTTGGATCGACTCCCTAAGAGCTTAGGAATGTAAAAAAAAAAACGTTATTAGTGTCATTGCAAATAAGTTGGTTGAGAGTTACTTACCTTATCTAATCACTATTATTGTTCCATAAGATTATTGCTTGTATGGATATTACCTTATCTAACGCTTGTATGGATGGTAAAGTTAGCTTATAGGTATTTAGTAATGTGTGCCTGAAATTCAGCGCATTTAATGACAGGTTTTGTTGATTAAAATAATTGTCAGCTTTATCTAAAGCACAACCAAAATTATTATAAGCAAAAACATGAGCCACTTAAAATTATTGGAGAGATGTATTTGTATTGTAACTGGAAACTTTACCCAATTGTACATAATTAGTTTGGTGTTATAGTGCATTTATGAAGCTGTTGATTGAATATGTTTGGGAGGATAAACCGACTCATTCCACTAGTTACATCACAGCTAAAAACAGAAAAACTTGAAAACTATTTCATACCGCTTTCTAATACTAAGGGATTAGTGTCCATCCAATGTCACAGATGTCAATAAAGATATACTTTTACCAAAGTTATTTATAGGGGGGACTGGCTTAAATCTTAACACTGCTACGAACCCACTACCCTAAATATCTCTAGTTAGGTACGGCTTTCCCAAAATGAAAAATAGGAATTGCTAAGTAGGATTGGTGCTGTGACCACACAAAAACATGTCCATGCTCTTCACCTTTGCCCACCACTTGTAACTCTTCTTTCCGCTGCTTTTTGTTTTTCCAATGACACCAACATTCCTCTTTGATTTTAGTCTTCCGATTTGAAAGCATGCCTCCAATGTTACCTCTTTCCCATTGCTGCATCTACTCTCTACCATTGCTTTATCTGTTTTCACAAGCTGATCATAGTACTCTTTATTCCTTTTCTCCAGCCCATAGATCTGACCTTGAAGATCTTCAATTTTCTGGTTAAGTAGGTATACCCTATGATCATCTCTCAGCTTCAGCATACATCGCGCCATCTCGCCTGCCTTCTGTTTCATAAAAACAGACTCTGCTACCAACCCCTTGTTTTCCTCCATCAATGATTCCACCCTATATCCCAATCTTGCATTTTCATTCAGTAATATCAGCCTCTCAGACTCCAACACATCAAGCAAACTCTTCTGAAGCTCAATCTTTCTTGACGAATCACAGCATTGCTTTTCCAGGGTGGTTACCTCATTTGTAAGAATGTCGTACTCCACATTCTTCATCACAAGCTCAGCGATAAAAGCATCGTTGTCTACCATGCCATAGTATTTAGTTGATGTTACAGATACTTGTTGGTAGGACAGAGAGCTCTCGGCATCAGACTCGATCTGACTGATTCCTGAATCTTCAGCTCCATCAAAAGAGTCGAGGGTTGAAGTAACAGAAAACTGTCTATTGTGATGTTTTGCAACAGTTTGGATGTAGCGATCTGATAAGGTGGTGTATGCAGTGTACAGTTCTTGGAGAAGTGCCAGCAGTTGAGGACGTTTGTTGTAGTAAAATTCTGCACGTTCAGCAAAAGAGTCCCCAACATTGTCCTCTTCAGCATTTTTCATAGCAAGTAAACTGATCCTCTGCTCCATTTCTGCCATAGGACATTATGTTTCAAGACAACTTAAATTTAAAAGCCAAAGAAATAAGAAAACCACATTTTGTAGGCGCATCATTTTGGCTTAAAATAATAATGATGAATTGCACGAACTGTTGCTTTTAATTGATTACACATATAAGATGTTATTTGACAGTTTTTAGACTATAAATTGCCAATGGATATCAAATAATACATTCAAAAGAAGAAGAGTTCAAAATTTCAAATTCCAGATAATGCCAAAAATATAGACCCAACGGATCCGTGACTTACCAGGGCCAGTAGCTTATTTTGGTTCAAGAAGGGGAGAATAATCTAAGATGGGACCTATGGGACACTATGTAATTGAGATTCAATAAGACAACATAATATTCCAAAATCTGTTGATGTGACATAACATATTTCAAAAACGAACTAATGATATTAGCTATAATTTTATAAAAAAAGTACATAATAACTTCGTTTATTTTTCTTTTAAATTCCCATTTTCTTTTAAATATTTATAAATATTCACGAGGATGGCAATTGAATCTCGGGACAAATTCTATCTTAAAAGTTTTGAATTCCTGTCAAATCGTGGGGCAGAAGGTATGGTTCCCCGCCCTACATTTAAATTCTATTAAAATATTTTGAATGAAACTTATAATTCCAATTCAAAATGTTATAAAGTTGGGACGACTCAAGATAATTTGAATAAAATTCCTGAAAGAGATAACAAAATGGCAAAACCTCCCAACAAATGGAAAAAGAAATGGGTATAAGGTTCACAAATTTCAAAGCCATCACGGGTTTGCATCAATCAGGCAAATAATAAGATGCTCTTTACAGGAAAGTTGTTGAGGACTGCACATCGGTCAGGGATGAAAGAACAGAAAGGTCGCTGTTACGAATATCAAGAAAGAGTTCATACATACACACACTCTCTCACAAGAAAGGTGTGTAGGATGGGGGTTGGTTTCCCTTCTCATAAGTTAGTTTAGGAGTTTCAAATTTTAAAATAAAGTTGGAACAAAATAGCATGGTGAAGGAAATTCAAAGTCGAACCTGGACCGACCAACTTCAGACTCCCTCAGACTAGTCTTACTTCAAACCACCTACCCTTCCAAACTGCAATAAATTTTTCTACATGTATACGCAATCAATCATCAGTCGGTAGGTAAGTTTTTTCCACAGGCTAAGTTTACTCCCTCACCCCTACCCCTCTCTGGTCCTCCTTGGTATTATGGAAAACAAACGAGAAAAACAAAAATTAAAATACAGTAAATTGAGTTTCAAGTCAACAATTAGCATTACCTGCGAGAGAAGAAGATAACGTTGAAGAATGCTTGGTGCTGAGTGTTACACTGTTTCTGTTGCTGCTGAAAGTATCGCAAGATGGAGATGAAGATGTTCGATTGATTGAAACCTCTTCTTCCTCCGGGGCCGCCATTGCTATCTAAACGTTAGCCTGTTAAGCTGCGCAATGCAATCTCCACTCTACTCTTTTCAAGTGCCTCTCCTCACTCAAAGTGCATCAACCACAGGAACACTCGCAGCTGACAACACGGTTTTGTGTTAACCATCCGACAAAAATATGTGCAGAACCACTACTTCAGCTTGTGAATCAAAATGCGGCAAAGGAAATCCGAGAGAGAGAAATGGAGGTTGAGGGTTTTGATCGAAATTGTATGTTTAAAATTTGAAGAGATTACGCATTTAACGAGGAAAAAAAGAAACGAACCAAAAAGAGAAAGAGAGAGAGAGAGAAAGAGAGAGTAGGGATCAGGTTTTTTTCCATTTGAACGATACTTCACAGTTCACATAATAAAGTGGTTTTCTTCTTTCCCATTACCTTCAATTTTTT

Coding sequence (CDS)

ATGAAAGGAAGTGTGTGTTTCCTCTGCGGTTCTCTCCCATTTCTTCCAAATCCAAACTACAACTCTTTCTCTTCTTCCTCCGATTCCATTTCTAAACGTAGCTTGATTCATGCTCAAACTCATCACCAAGAGATTCGCGTTTGCACCAATCGTACTTGCCGTCGTCAAGGTTCCTTTCACGCTCTCGAAATTCTCAACGCCCTAGCACCTCCCAACATTGTCGTCAATCCCTCCGGTTGTTTAGGAAAGTGTGGCGCTGGCCCTAATGTTGCTGTTTTGCCCGATGGATTCGTCGTCGGCCATTGTGGCACACCTGCTCGGGCTGCCGATCTTATCATTCAATTATCTGGTCAAGACTCAGATTCTGTTGGTATCTCCAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCTGAGCTACTTCTTTCGCAGGCGATAGATTTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTCCATCGTAAGATTGGCACTGGGGAATCACTCTGGCGCCCTTGAAGATGCAAATGAAGCTCTAAGAGTAGCTCCTCAATATCTAGAGGCTTACATTTGCCAAGGGGACGCATTTTTAGCTATGGACCATTTTGACTCGGCTGAGATATCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGTCGTTCAAAGTCATTCAAGGCGCGAGTTGCTAAACTTCAGGAGAAGCTCAGTGCTGTGAGAACACAATAA

Protein sequence

MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFHALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDSDSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSFKARVAKLQEKLSAVRTQ

Homology

[Close]

BLAST of CsGy1G004980 vs. NCBI nr
Match: XP_004137391.1 (PREDICTED: uncharacterized protein LOC101213093 [Cucumis sativus] >KGN63963.1 hypothetical protein Csa_1G031840 [Cucumis sativus])

HSP 1 Score: 510.0 bits (1312), Expect = 4.7e-141
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH
Sbjct: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
           ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS
Sbjct: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180
           DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL
Sbjct: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180

Query: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240
           GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF
Sbjct: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240

Query: 241 KARVAKLQEKLSAVRTQ 258
           KARVAKLQEKLSAVRTQ
Sbjct: 241 KARVAKLQEKLSAVRTQ 257

[Close]

BLAST of CsGy1G004980 vs. NCBI nr
Match: XP_008437609.1 (PREDICTED: tetratricopeptide repeat protein 1 [Cucumis melo])

HSP 1 Score: 481.9 bits (1239), Expect = 1.4e-132
Identity = 243/257 (94.55%), Postives = 249/257 (96.89%), Query Frame = 0


Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           MKGSVCFLC SLPFLPNPN+ SFSSSSDSISKRS IHAQTHHQEIRVCTNRTCRRQGSF 
Sbjct: 1   MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFL 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
           ALEIL+ALAPP IVVNPSGCLGKCGAGPNVAVLPDGFV+GHCGTPARAADLIIQLSG+DS
Sbjct: 61  ALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSGRDS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180
           DSVG+SKSLEALALRKRAQCELEDGNFSQAELLLSQAIDL PCGGIHIIFKDRS+VRLAL
Sbjct: 121 DSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDRSVVRLAL 180

Query: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240
           GNHSGALEDANEALRVAPQYLEAYICQGD FLAMD FDSAEISYSTALEIDPSIRRSKSF
Sbjct: 181 GNHSGALEDANEALRVAPQYLEAYICQGDVFLAMDKFDSAEISYSTALEIDPSIRRSKSF 240

Query: 241 KARVAKLQEKLSAVRTQ 258
           KARVAKLQEKLSAVRTQ
Sbjct: 241 KARVAKLQEKLSAVRTQ 257

[Close]

BLAST of CsGy1G004980 vs. NCBI nr
Match: XP_022923908.1 (small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1 [Cucurbita moschata])

HSP 1 Score: 394.0 bits (1011), Expect = 3.8e-106
Identity = 204/257 (79.38%), Postives = 228/257 (88.72%), Query Frame = 0


Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           M  ++C LC  +P    PN  SFSS+S S++    I AQ  +QEIRVCTNRTCRRQGSF 
Sbjct: 1   MTATLCLLC--IPLRFPPNRTSFSSTSISLTP---IRAQ--NQEIRVCTNRTCRRQGSFQ 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
            LE L+ALAPP I VNPSGCLGKCGAGPNVAVLPDGFVVGHC TPARAA++I+QLSG  S
Sbjct: 61  TLETLSALAPPTITVNPSGCLGKCGAGPNVAVLPDGFVVGHCATPARAAEVIMQLSGGVS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180
           DS+G+SKSLEALALRKRA+CE+EDGNFSQA+LLLS+AI+LKPCGGIHIIFKDRSIVRLAL
Sbjct: 121 DSLGVSKSLEALALRKRAECEVEDGNFSQADLLLSKAIELKPCGGIHIIFKDRSIVRLAL 180

Query: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240
           GNH+GALEDANEALRVAP+Y EAYICQGD FL+MDHFDSAE+SYSTALEI+PSIRRSKSF
Sbjct: 181 GNHAGALEDANEALRVAPRYPEAYICQGDVFLSMDHFDSAEMSYSTALEIEPSIRRSKSF 240

Query: 241 KARVAKLQEKLSAVRTQ 258
           KARVAKLQEKL+AVRTQ
Sbjct: 241 KARVAKLQEKLNAVRTQ 250

[Close]

BLAST of CsGy1G004980 vs. NCBI nr
Match: XP_023519354.1 (small glutamine-rich tetratricopeptide repeat-containing protein beta [Cucurbita pepo subsp. pepo])

HSP 1 Score: 392.5 bits (1007), Expect = 1.1e-105
Identity = 204/257 (79.38%), Postives = 227/257 (88.33%), Query Frame = 0


Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           M  ++C LC  +P    PN  SFSS+S S++    I AQ  +QEIRVCTNRTCRRQGSF 
Sbjct: 1   MTATLCLLC--IPLRFPPNRTSFSSTSISLTP---IRAQ--NQEIRVCTNRTCRRQGSFQ 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
            LE L+ALAPP I VNPSGCLGKCGAGPNVAVLPDGFVVGHC TPARAA++I+QLSG  S
Sbjct: 61  TLETLSALAPPTITVNPSGCLGKCGAGPNVAVLPDGFVVGHCATPARAAEVIMQLSGGVS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180
           DS+G+SKSLEALAL KRA+CE+EDGNFSQA+LLLS+AI+LKPCGGIHIIFKDRSIVRLAL
Sbjct: 121 DSLGVSKSLEALALWKRAECEVEDGNFSQADLLLSKAIELKPCGGIHIIFKDRSIVRLAL 180

Query: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240
           GNH+GALEDANEALRVAP+Y EAYICQGD FL+MDHFDSAE+SYSTALEIDPSIRRSKSF
Sbjct: 181 GNHAGALEDANEALRVAPRYPEAYICQGDVFLSMDHFDSAEMSYSTALEIDPSIRRSKSF 240

Query: 241 KARVAKLQEKLSAVRTQ 258
           KARVAKLQEKL+AVRTQ
Sbjct: 241 KARVAKLQEKLNAVRTQ 250

[Close]

BLAST of CsGy1G004980 vs. NCBI nr
Match: XP_023001358.1 (uncharacterized protein LOC111495518 [Cucurbita maxima])

HSP 1 Score: 389.0 bits (998), Expect = 1.2e-104
Identity = 203/257 (78.99%), Postives = 225/257 (87.55%), Query Frame = 0


Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           M  ++C LC  +P    PN  SFSS+S S++    I AQ  +QEIRVCTNRTCRRQGSF 
Sbjct: 1   MTATLCLLC--IPLRFPPNRTSFSSTSVSLTP---IRAQ--NQEIRVCTNRTCRRQGSFQ 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
            LE L ALAPP I VNPSGCLGKCGAGPNVAV PDGFVVGHC TPARAA++I++LSG  S
Sbjct: 61  TLETLCALAPPTITVNPSGCLGKCGAGPNVAVFPDGFVVGHCATPARAAEVIMRLSGGVS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180
           DS+G+SKSLEALALRKRA+CE+EDGNFSQA+LLLS+AI+LKPCGGIHIIFKDRSIVRLAL
Sbjct: 121 DSLGVSKSLEALALRKRAECEVEDGNFSQADLLLSKAIELKPCGGIHIIFKDRSIVRLAL 180

Query: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240
           GN++ ALEDANEALRVAPQY EAYICQGD FL+MDHFDSAEISYSTALEIDPSIRRSKSF
Sbjct: 181 GNYAAALEDANEALRVAPQYPEAYICQGDVFLSMDHFDSAEISYSTALEIDPSIRRSKSF 240

Query: 241 KARVAKLQEKLSAVRTQ 258
           KARVAKLQEKL+AVRTQ
Sbjct: 241 KARVAKLQEKLNAVRTQ 250

[Close]

BLAST of CsGy1G004980 vs. TAIR10
Match: AT3G17670.2 (tetratricopeptide repeat (TPR)-containing protein)

HSP 1 Score: 245.0 bits (624), Expect = 5.1e-65
Identity = 119/212 (56.13%), Postives = 157/212 (74.06%), Query Frame = 0


Query: 43  QEIRVCTNRTCRRQGSFHALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHC 102
           +EIRVCTNRTCRRQGSF  LE L ALAPP + V    CLG+CG+GPN+  LP G ++ HC
Sbjct: 19  KEIRVCTNRTCRRQGSFQILETLTALAPPELRVTHCACLGRCGSGPNLVALPQGLILRHC 78

Query: 103 GTPARAADLIIQLSG---QDSDSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAID 162
            TP+RAA+++  L G   + S S  ++ +L ALAL   A  +++ GNFS+AE LL+QA++
Sbjct: 79  ATPSRAAEILFSLCGDGREASSSSAVTDALTALALTNNALSQIDAGNFSEAEALLTQALE 138

Query: 163 LKPCGGIHIIFKDRSIVRLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDS 222
           LKP GG+H IFK RS+ +L + ++SGALED ++AL +AP Y E YICQGD ++A   +D 
Sbjct: 139 LKPYGGLHRIFKHRSVAKLGMLDYSGALEDISQALALAPNYSEPYICQGDVYVAKGQYDL 198

Query: 223 AEISYSTALEIDPSIRRSKSFKARVAKLQEKL 252
           AE SY T LEIDPS+RRSK FKAR+AKLQ+K+
Sbjct: 199 AEKSYLTCLEIDPSLRRSKPFKARIAKLQQKV 230

[Close]

BLAST of CsGy1G004980 vs. TAIR10
Match: AT1G04130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 46.2 bits (108), Expect = 3.5e-05
Identity = 30/84 (35.71%), Postives = 46/84 (54.76%), Query Frame = 0


Query: 168 IIFKDRSIVRLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTA 227
           I+F +RS V L LGN+  AL DA E++R++P  ++A      A +++D  + A+      
Sbjct: 72  ILFSNRSHVNLLLGNYRRALTDAEESMRLSPHNVKAVYRAAKASMSLDLLNEAKSYCEKG 131

Query: 228 LEIDPSIRRSKSFKARV-AKLQEK 251
           +E DPS    K     V +K QEK
Sbjct: 132 IENDPSNEDMKKLLKLVNSKKQEK 155

[Close]

BLAST of CsGy1G004980 vs. Swiss-Prot
Match: sp|P15705|STI1_YEAST (Heat shock protein STI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=STI1 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.1e-07
Identity = 36/126 (28.57%), Postives = 64/126 (50.79%), Query Frame = 0


Query: 128 SLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLALGNHSGAL 187
           SL A   +++        ++ +A  L ++AI++      H+++ +RS    +L   S AL
Sbjct: 2   SLTADEYKQQGNAAFTAKDYDKAIELFTKAIEVSETPN-HVLYSNRSACYTSLKKFSDAL 61

Query: 188 EDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSFKARVAKL 247
            DANE +++ P + + Y   G A L +   D AE +Y  ALE+D S + +K    +V + 
Sbjct: 62  NDANECVKINPSWSKGYNRLGAAHLGLGDLDEAESNYKKALELDASNKAAKEGLDQVHRT 121

Query: 248 QEKLSA 254
           Q+   A
Sbjct: 122 QQARQA 126

[Close]

BLAST of CsGy1G004980 vs. Swiss-Prot
Match: sp|P0CT30|SGT2_USTMA (Small glutamine-rich tetratricopeptide repeat-containing protein 2 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=UMAG_10205 PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 9.8e-05
Identity = 28/98 (28.57%), Postives = 54/98 (55.10%), Query Frame = 0


Query: 156 QAIDLKPCGGIHIIFKDRSIVRLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMD 215
           +AI+L P   ++  F +R+     +G H  A++DA +A ++ P++ +AY   G A  +  
Sbjct: 130 KAIELNPNSPVY--FSNRAAAFSQIGQHDSAIDDAKQASKIDPKFGKAYSRLGHALFSSG 189

Query: 216 HFDSAEISYSTALEIDPSIRRSKSFKARVAKLQEKLSA 254
            +  A  +Y   +E+DPS   ++  K  +A  +E+LS+
Sbjct: 190 RYQEAVEAYQKGVEVDPS---NEVLKKGLAASKEQLSS 222

[Close]

BLAST of CsGy1G004980 vs. TrEMBL
Match: tr|A0A0A0LQA2|A0A0A0LQA2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G031840 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 3.1e-141
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH
Sbjct: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
           ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS
Sbjct: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180
           DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL
Sbjct: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180

Query: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240
           GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF
Sbjct: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240

Query: 241 KARVAKLQEKLSAVRTQ 258
           KARVAKLQEKLSAVRTQ
Sbjct: 241 KARVAKLQEKLSAVRTQ 257

[Close]

BLAST of CsGy1G004980 vs. TrEMBL
Match: tr|A0A1S3AUF9|A0A1S3AUF9_CUCME (tetratricopeptide repeat protein 1 OS=Cucumis melo OX=3656 GN=LOC103482942 PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 9.1e-133
Identity = 243/257 (94.55%), Postives = 249/257 (96.89%), Query Frame = 0


Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           MKGSVCFLC SLPFLPNPN+ SFSSSSDSISKRS IHAQTHHQEIRVCTNRTCRRQGSF 
Sbjct: 1   MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFL 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
           ALEIL+ALAPP IVVNPSGCLGKCGAGPNVAVLPDGFV+GHCGTPARAADLIIQLSG+DS
Sbjct: 61  ALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSGRDS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180
           DSVG+SKSLEALALRKRAQCELEDGNFSQAELLLSQAIDL PCGGIHIIFKDRS+VRLAL
Sbjct: 121 DSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDRSVVRLAL 180

Query: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240
           GNHSGALEDANEALRVAPQYLEAYICQGD FLAMD FDSAEISYSTALEIDPSIRRSKSF
Sbjct: 181 GNHSGALEDANEALRVAPQYLEAYICQGDVFLAMDKFDSAEISYSTALEIDPSIRRSKSF 240

Query: 241 KARVAKLQEKLSAVRTQ 258
           KARVAKLQEKLSAVRTQ
Sbjct: 241 KARVAKLQEKLSAVRTQ 257

[Close]

BLAST of CsGy1G004980 vs. TrEMBL
Match: tr|F6HVT9|F6HVT9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_17s0053g00600 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 4.2e-77
Identity = 163/259 (62.93%), Postives = 192/259 (74.13%), Query Frame = 0


Query: 1   MKGSVCFLCGS-LP-FLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGS 60
           MKG V FL  S +P  LP PN +  S +    SKR  + A+    E+RVC NRTCRRQGS
Sbjct: 40  MKGGVSFLNASPIPQLLPLPN-DRLSIARVYTSKRRRLRAEI---ELRVCVNRTCRRQGS 99

Query: 61  FHALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQ 120
              LE L+ +A P++ V   GCLG+CGAGPN+  LPDG +VGHCGT ARAA++++     
Sbjct: 100 LQTLETLSGIASPDVAVKSCGCLGRCGAGPNLVALPDGVIVGHCGTAARAAEVMMSFVAG 159

Query: 121 DSDSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRL 180
           D+       SL ALALRKRA+ ELE  NFS+AELLLSQAIDLKP GGIHII+K RS  RL
Sbjct: 160 DAQG-----SLAALALRKRAENELEKNNFSEAELLLSQAIDLKPSGGIHIIYKVRSSARL 219

Query: 181 ALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSK 240
            +GN++GALEDANEAL +AP+Y EAYICQGDAFLAMD FD AE SYST LE+DPSIRRSK
Sbjct: 220 TMGNYAGALEDANEALTLAPRYPEAYICQGDAFLAMDQFDDAEKSYSTCLELDPSIRRSK 279

Query: 241 SFKARVAKLQEKLSAVRTQ 258
           SF+ARVAKLQEKLSA  T+
Sbjct: 280 SFRARVAKLQEKLSAASTR 289

[Close]

BLAST of CsGy1G004980 vs. TrEMBL
Match: tr|A0A2I4DMN1|A0A2I4DMN1_9ROSI (uncharacterized protein LOC108981612 OS=Juglans regia OX=51240 GN=LOC108981612 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.0e-75
Identity = 162/259 (62.55%), Postives = 193/259 (74.52%), Query Frame = 0


Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           M+G +  L  + P LP       S+SS+    R  I A+   QEIRVCTNRTCRRQGS  
Sbjct: 1   MEGGLSLLRNARPSLP-------SASSEIQPIRHRIKAEI--QEIRVCTNRTCRRQGSLQ 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLP-DG---FVVGHCGTPARAADLIIQL- 120
            L+ L+ALAPPN+ VN  GCLG+CGAGPN+A +P DG    +VGHCGTP+RAA +++ L 
Sbjct: 61  TLQTLSALAPPNVSVNSCGCLGRCGAGPNLAAIPEDGGRVILVGHCGTPSRAAQVLVGLL 120

Query: 121 -SGQDSDSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRS 180
             G DSD       LEALALRKRA+ E + GN S AE LLSQAI LKP GGIH+++KDRS
Sbjct: 121 SFGLDSDDGDAKTGLEALALRKRAENESDMGNLSLAEQLLSQAIQLKPFGGIHVLYKDRS 180

Query: 181 IVRLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSI 240
           I RLALGN+SGALEDA EAL +AP+Y EAYICQGDAFLAMD FDSAE SY  +L+IDPS+
Sbjct: 181 IARLALGNYSGALEDAREALTLAPRYPEAYICQGDAFLAMDQFDSAEKSYLMSLQIDPSL 240

Query: 241 RRSKSFKARVAKLQEKLSA 254
           RRSKSFKAR+AKL+EKL+A
Sbjct: 241 RRSKSFKARIAKLEEKLAA 250

[Close]

BLAST of CsGy1G004980 vs. TrEMBL
Match: tr|I1K580|I1K580_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100813823 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.3e-74
Identity = 150/218 (68.81%), Postives = 170/218 (77.98%), Query Frame = 0


Query: 43  QEIRVCTNRTCRRQGSFHALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHC 102
           QEIRVCTNRTCRRQGSF  LE L+ LAPPN+ V   GCLG+CG GPN+ VLPDG +VGHC
Sbjct: 24  QEIRVCTNRTCRRQGSFQTLETLSGLAPPNVAVKSCGCLGRCGGGPNLVVLPDGLIVGHC 83

Query: 103 GTPARAADLIIQL----SGQDSDSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAI 162
           GT ARAA++I  L     G D  +      L+ALALRKRA+ E    NF++AELLLSQAI
Sbjct: 84  GTAARAAEVIATLFAGAGGHDPKT-----CLDALALRKRAEIEFAKRNFTEAELLLSQAI 143

Query: 163 DLKPCGGIHIIFKDRSIVRLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFD 222
           DLKP GGIHI FK RS VRL LGN+SGALEDA EAL +AP Y EAYICQGDAFLA++ FD
Sbjct: 144 DLKPFGGIHITFKCRSFVRLELGNYSGALEDAEEALALAPGYSEAYICQGDAFLALNKFD 203

Query: 223 SAEISYSTALEIDPSIRRSKSFKARVAKLQEKLSAVRT 257
            AE SYS +L IDPSIR SKSFKAR+AKLQEKL+AV+T
Sbjct: 204 LAEQSYSASLVIDPSIRHSKSFKARIAKLQEKLAAVKT 236

The following BLAST results are available for this feature:

BLAST of CsGy1G004980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137391.1	4.7e-141	100.00	PREDICTED: uncharacterized protein LOC101213093 [Cucumis sativus] >KGN63963.1 hy...	[more]
XP_008437609.1	1.4e-132	94.55	PREDICTED: tetratricopeptide repeat protein 1 [Cucumis melo]	[more]
XP_022923908.1	3.8e-106	79.38	small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1...	[more]
XP_023519354.1	1.1e-105	79.38	small glutamine-rich tetratricopeptide repeat-containing protein beta [Cucurbita...	[more]
XP_023001358.1	1.2e-104	78.99	uncharacterized protein LOC111495518 [Cucurbita maxima]	[more]

BLAST of CsGy1G004980 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G17670.2	5.1e-65	56.13	tetratricopeptide repeat (TPR)-containing protein	[more]
AT1G04130.1	3.5e-05	35.71	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of CsGy1G004980 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P15705\|STI1_YEAST	6.1e-07	28.57	Heat shock protein STI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)...	[more]
sp\|P0CT30\|SGT2_USTMA	9.8e-05	28.57	Small glutamine-rich tetratricopeptide repeat-containing protein 2 OS=Ustilago m...	[more]

BLAST of CsGy1G004980 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LQA2\|A0A0A0LQA2_CUCSA	3.1e-141	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G031840 PE=4 SV=1	[more]
tr\|A0A1S3AUF9\|A0A1S3AUF9_CUCME	9.1e-133	94.55	tetratricopeptide repeat protein 1 OS=Cucumis melo OX=3656 GN=LOC103482942 PE=4 ...	[more]
tr\|F6HVT9\|F6HVT9_VITVI	4.2e-77	62.93	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_17s0053g00600 PE=4 SV=...	[more]
tr\|A0A2I4DMN1\|A0A2I4DMN1_9ROSI	1.0e-75	62.55	uncharacterized protein LOC108981612 OS=Juglans regia OX=51240 GN=LOC108981612 P...	[more]
tr\|I1K580\|I1K580_SOYBN	4.3e-74	68.81	Uncharacterized protein OS=Glycine max OX=3847 GN=100813823 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf
IPR013026	TPR-contain_dom
IPR011990	TPR-like_helical_dom_sf
IPR019734	TPR_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G004980.1	CsGy1G004980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 131..164 e-value: 59.0 score: 8.2 coord: 167..200 e-value: 20.0 score: 12.3 coord: 201..234 e-value: 0.013 score: 24.7
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 167..200 score: 6.166
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 201..234 score: 9.381
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 131..164 score: 6.992
None	No IPR available	GENE3D	G3DSA:3.40.30.10		coord: 40..126 e-value: 3.0E-8 score: 35.7
None	No IPR available	PANTHER	PTHR22904	TPR REPEAT CONTAINING PROTEIN	coord: 25..255
None	No IPR available	PANTHER	PTHR22904:SF368	TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 25..255
None	No IPR available	CDD	cd02980	TRX_Fd_family	coord: 45..112 e-value: 1.20454E-12 score: 60.3336
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 127..257 e-value: 5.7E-19 score: 70.5
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 131..250
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 131..234 score: 18.019
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	SSF52833	Thioredoxin-like	coord: 45..112

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G004980	Cucurbita maxima (Rimu)	cgybcmaB064
CsGy1G004980	Cucurbita maxima (Rimu)	cgybcmaB105
CsGy1G004980	Cucurbita moschata (Rifu)	cgybcmoB060
CsGy1G004980	Cucurbita moschata (Rifu)	cgybcmoB099
CsGy1G004980	Cucurbita pepo (Zucchini)	cgybcpeB081
CsGy1G004980	Cucurbita pepo (Zucchini)	cgybcpeB098
CsGy1G004980	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G004980	Bottle gourd (USVL1VR-Ls)	cgyblsiB018
CsGy1G004980	Melon (DHL92) v3.5.1	cgybmeB022
CsGy1G004980	Melon (DHL92) v3.6.1	cgybmedB020
CsGy1G004980	Watermelon (Charleston Gray)	cgybwcgB053
CsGy1G004980	Watermelon (97103) v1	cgybwmB064
CsGy1G004980	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G004980	Silver-seed gourd	carcgybB0395
CsGy1G004980	Silver-seed gourd	carcgybB0526
CsGy1G004980	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G004980	Watermelon (97103) v2	cgybwmbB053
CsGy1G004980	Wax gourd	cgybwgoB031