CsGy1G004870 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G004870
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	chaperone protein DnaJ isoform X2
Location	Chr1 : 3290656 .. 3295674 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTCCTACACTCAGCCACGAGCAAGAATGATGCCACCCAATGGTATTTGCAGTCCCTGCAATGCGAACCTTAACCCAGCACCTAAATTTCGACTACTTTCTCTATCTGCAATTCCAAACGTGTTACATTTTCCAAATCCACCTTCTCTCTACCTCGGTTCCAGCTCAAACTATTCCGGATTTTCCCGCTTGGTTGGTCCACCAAGGAAGATGGATTCTCAAACCAGAAGTCGCTTAACATTTGTAAATTATGGTGCAGGAGCTACAAGGGCCGCCGCTACTGATCACTATTCGACGTTGAATGTTAGCCGGAATGCAACATTGCAGGATATAAAAAACTCATATAAGAAACTCGCTCGCAAGGTATTTTATGTTTTGTTTTCTGCTATTAGTATATTCTTGATTTTTACGGGGCTTCTTGGTCCCCAGTAAAGCGAATTAGAGGGTTAAAAATCGAATGGAACTGCACTGTTGGAGGGGTAATGAGAAACTAGAGATTTGAAAGATAAGTGAAATTTCAAATGCTACATGTGTATCTGTTAAGGTTCCAAACCTGAAACTCAGAAAACCACAACAAAGGCAGCACTCTGTTACAATATATTGAAATAACAAGCCAAATGTCTAGAACCAGTCAAGAACATAAGCAAGGATGATAAAAACAATAAGAACACTAAACTTAGTTTCTTCGAGAAGGCTGTAAACCTCTCCTAATAAAGCCTACGGCAGCTTTCACAGAAAACAAAACGTAAAAACTTCAATCGCTAAACATTCCATATAAATACGAATACCCATCACAGCAATGGGCCCTCAGGTGTTACTTCGTCTCTCCTCAGCTCCTCATTAGCTATATTCTGTGTTATTCCCCTTTTTGCCCCTTCTCTTGTATGTGTGTAATATTGGGGGTCTAACATTACCGCTCAGCTTGAAACTCACCTTGTCCTCAAGGTGGAATGTGGGAAATTGCTGATTCATTAAGCACATCTCCTCCCAAGTCGTTTCGCTGTCTGGCATCCCCTTCCACTTCACCAGCCACTCGTTTGTGGCCATTTCTCTATTCCATCTGATCCCCAAAACTGCCTCCCACTTCAGCTGCAATTCAAATTCTTCAGTCAATATGGGGGGAAATGTTGGACCTTTTGAGTTTGACCCAATTTCAACTTCTTCTGGGATACATGAAAAACATTATGGATACATGCTTCCGGTGGTAATTCTAAGCGATATGCCACTTCTCCTATTCTTTCCATGATTCTGTAGGGTCCATAAAACTTAGGGAAAAGCTTCTCACTTCTCTTTTTTTCTAAGGATCTTTGCCGATAGGGCCTTAATTTCAAATACACTTCATCACCTACTTGAAAGGTCAACTCCCTTCAGTGTAGATCCACTTGCCTTTTCATCCCATTCCGAGCCAAAACAAAATTCTCCTTCAGTGCTCTAATTATCAACTCTCTCTTCTTCAACAGTTGATTAGTACTATTATTTGTTGTCTTGCTTTCACCGTAAGAGACGACAGGGGGTCGGGGCCTCCCATAAACAACTTGGAATGGGGTTGTCTTTGAAGAGGCATGGAATGTGGTGTTGTATCAAAGTTCAGCCCACGGAATACACTTGTTCCACTTCCCTGGTTGCTCGTTGCAAAAACACCTAAAGAAAGTCTCTTGACATCTATTAACTCTCTCTATTTTCCTGTTGGTTTGAGGATGGAGGGCTGTGCTTCGTTTCAATAACGTTCCCATGGCTGTGAACAATTACGTTTTACATTTCCTGGCTTACGGCAACTTAAGAAGCATGGACATGGACACGAGACACGACACAGACACGATAGGACACGGCGATACACCAATTTCTAAAATAATAAGATACGGACACGTTAGGGATACACTCTTTTTTAAAATTAATTTTTTTTATAATATATGTAAATTTGTCACAAAATACTAAACATTCTTCATTTCCTCACAAAGAAAAAAAAAAAAAACTAAATGCTCTTCACTAAAAAAAAAACATAAAATGTCATTGTGTCATTGACCACAAGATGGGGATGAAAGAAGTGAGGGAGAGTGCACAACAAGGAGATTTGAGGGTTATGTTAATCTGTATATAATATTTTTATATTTTGTCTTTATTAAAGTAACTGGACTTGGGCTTCACCTAATATACATATTAATAACATTAAAGTAAGTGGGCTTGGGCTTCACCTAAAAATTGCAATTGGGAGTGTCCGGACGTGTCTGAAACGTGTCCGGACAATTAAAAAAAGGAAAAAATAGGACACGGTATTTGGCGTATTGGACACGTGTCCCCAACGTGTCCGGACGAATCCGTGTCCTCCAAGTGTCCGACACCGATACCACCTCTAATATGAAGTGTCCGTGCTTCTTAGACGGCAACAGTGACAAACAATCTTCTAAGAGTCGGATTTTCAAATATCAGAACTAGGCTTCTGAAAATTGTTAGGTATCCCTGAAGGACCTTGAGAGTTATTATTATTCTTGCTAGTTAGGGCACTACTAGGTTGAGAAACAAGTGAACCAGATTGGGAACTCTTAATACGAAGAACACGATTGAAGGGCTCATCTAGTTACGGAATCTCAGAAGCAGAAAGGACATGTGTTTTAGCCATTCCAAATCCAAGTAATAGTCCGTTTAAGAATATCATAATTGCCATCTTTTCACGCTGATCTTGTTGAACCTTGACATCAAAGCTAAAAGGTAATAGTAAAGCAAGTTCAGTAGCTGTCTTCTTAAGCCTCATAAAGTAGCTTGTAACAGATTCTGCCTTCTGTTCAGCTCAAAAAAATTGCATACAGACATCAAACATTCGATGAACTTGTTCTTTTCCATAGTATAGAAAGTCTAAGAACTCTAGGAGCTCTTTCACAGAATCACAATGATTTACTAAACCAACATCACTTTCAATAGAATTCTTAATTTGAAGATAAAGTCGAGTGTCATCATGAAGCGAAGCCTTTTTCTTATCATCTTTTTGTGATTCCTTAGTCACATGATCATCCATATCTGCACTAAGTAAAATTGAATCATGTGACGCCAATCATAGTAGTTAGATCCATTTAATTCATGTTCAATTATCTTCAATGCTAGGGGAATAACATTAGATACAACTATATGCTTCACCTCACCCATTATGAGCTAACCAACAGTTTGAAGATCTCACAAGTGAAACAAAAACAAATAAAAAATACAGAACAGCCCCAAATTGGATAGAAACAACAACAAATCCTTAGAACAAATGGGTATTTTCGAATAACTTCAAACCTTGAATAGACTTCGATGATACCAAATGCAGAGACCAGCCGGAAAACGCAAATCAACACGAACCCCGGTGGAAACAAAGACGATGCTCTCACATGCCCCATGCGCTGGCGCATGGTGATGGATGCCCATCTTTCTGGCAGTGCGTAAACCTCACATGCAGTTGTTTTCGGCAAACGATGACCCTAGATTGCGACGGGAATAGGAGACACTCCTTCTAAGGTTGGTGGTGTAGATCGATGGCCACTTTAACTTGATGGCCCAAACTTACACCCTAACCCTAACCTCAAGTGGAGTAGCCGTGAAACAGAAAGGCAAAGAAACAAATGTATGAAACCCTAGTTGGGCTCTAATACCATGTAAATGTAAATTATACTCTTGGAGAATATACATATCCATTAATTAGATTGAAGATACATATATATTGGCAACTAAAAAAATTCTAATCTAGAGAATGTGAAATCACAATAAAGGACGACTGTACATAATTACAATATAAACATGTATTATAACAGTCTTCACCATGCCGCATAGAGGTTCGTTTGGTTGGTTTGGACGCATACATGCTCAACTAGGCTGCATAGAGAACTAGGCCGCATAGAGTACTCGGCACAACACAACTCACTTACTCATGCCGCCTAGCCCTTCCTGCACTTGGCTGCCTAGGGCACTCATGTGGTCGTCTCACCAACACTCTTGGTCGCATGGAGGTTATTTTGGAAAAGGCTGGCCGCCTAGGGTCACGAGCATGCTTGTCCAAGGCGTTGTTTGCCTATGGCCGCATGCCCAAACATCCTCACACCACCTTATGTTTATGCTTTTGTTCTTAGTTTAGCTCGTTTCCTTTAATTTCTATGTCGTTTGCTTGTAAGTGACATTTCACACTTTTCATATGCAAACCTGTCATATATGAAAAAGTCTAGAATGTACTATAGGGGAAACCCACTAGTCAATTTCCCGACTAAGCCTTATTGTACTCTTTGCAAACCAAACTTTCTTGCAATTGCCTATCTTCAATGCTTTTTTTAATGGTGTTTTCAACACTTTTCTTTCTCTCTCACGTTTTATAAAATAATTTTCTCTCAAAACGTGAAGGGAGGTTACATCATACTGCGAGTTTGCATGTGGCTTTTGGATTTAGTATCATTGACTTGTTCGCCGAGTTAGAGCAAGTGCCGCACAATCATCTGTCTTGTATTTGAAAAGTTGCGATTGTGACACCTAGCATCCCCCTGGATGGAATGCGTTCTAAATAACTGACCTGTTTGAAGTAGAGGGGGCTTGATGGTGGGCACAATTTGTCTCTAACAAATCATGATTTTGATCTGCAATCAACTTTGCCTTTGTGAATCTCTTTTTAGAGGCCTCCTTCAACCTCTTTCTTCTAACAAAGCATTTCGGAAATGGTTTAAAAAGGGTAGGAACATGCCTTTTTTCATTATATTGATGTAAAGTTAGTTTTCTTTTATAAAAACTGTCTTCTTCTTCTTTGGTAAAGGTATACAAGTTAAAATTACTGTCTTTTTACAAATGGGAATCTCGTTTTCCACCTCATGGAATAGGCCCAGGAGCATCTACTTTGTATTTAATTAATAAGATAATATAGATTACACAATATTCCAAATGATTCCCCCCCTTTTATTTTTATTCGAACAGTACCATCCAGATGTGAACAAGGATCCTGGATCTGAAGACAGGTTCAAAGAGATAAGTGCTGCATATGAGGTGAGAATCAAGACTCTCATTTGA

mRNA sequence

ATGAAGTCCTACACTCAGCCACGAGCAAGAATGATGCCACCCAATGGTATTTGCAGTCCCTGCAATGCGAACCTTAACCCAGCACCTAAATTTCGACTACTTTCTCTATCTGCAATTCCAAACGTGTTACATTTTCCAAATCCACCTTCTCTCTACCTCGGTTCCAGCTCAAACTATTCCGGATTTTCCCGCTTGGTTGGTCCACCAAGGAAGATGGATTCTCAAACCAGAAGTCGCTTAACATTTGTAAATTATGGTGCAGGAGCTACAAGGGCCGCCGCTACTGATCACTATTCGACGTTGAATGTTAGCCGGAATGCAACATTGCAGGATATAAAAAACTCATATAAGAAACTCGCTCGCAAGTACCATCCAGATGTGAACAAGGATCCTGGATCTGAAGACAGGTTCAAAGAGATAAGTGCTGCATATGAGGTGAGAATCAAGACTCTCATTTGA

Coding sequence (CDS)

ATGAAGTCCTACACTCAGCCACGAGCAAGAATGATGCCACCCAATGGTATTTGCAGTCCCTGCAATGCGAACCTTAACCCAGCACCTAAATTTCGACTACTTTCTCTATCTGCAATTCCAAACGTGTTACATTTTCCAAATCCACCTTCTCTCTACCTCGGTTCCAGCTCAAACTATTCCGGATTTTCCCGCTTGGTTGGTCCACCAAGGAAGATGGATTCTCAAACCAGAAGTCGCTTAACATTTGTAAATTATGGTGCAGGAGCTACAAGGGCCGCCGCTACTGATCACTATTCGACGTTGAATGTTAGCCGGAATGCAACATTGCAGGATATAAAAAACTCATATAAGAAACTCGCTCGCAAGTACCATCCAGATGTGAACAAGGATCCTGGATCTGAAGACAGGTTCAAAGAGATAAGTGCTGCATATGAGGTGAGAATCAAGACTCTCATTTGA

Protein sequence

MKSYTQPRARMMPPNGICSPCNANLNPAPKFRLLSLSAIPNVLHFPNPPSLYLGSSSNYSGFSRLVGPPRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLARKYHPDVNKDPGSEDRFKEISAAYEVRIKTLI

Homology

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BLAST of CsGy1G004870 vs. NCBI nr
Match: XP_011649531.1 (PREDICTED: chaperone protein dnaJ 1, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 296.6 bits (758), Expect = 4.9e-77
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MKSYTQPRARMMPPNGICSPCNANLNPAPKFRLLSLSAIPNVLHFPNPPSLYLGSSSNYS 60
           MKSYTQPRARMMPPNGICSPCNANLNPAPKFRLLSLSAIPNVLHFPNPPSLYLGSSSNYS
Sbjct: 1   MKSYTQPRARMMPPNGICSPCNANLNPAPKFRLLSLSAIPNVLHFPNPPSLYLGSSSNYS 60

Query: 61  GFSRLVGPPRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA 120
           GFSRLVGPPRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA
Sbjct: 61  GFSRLVGPPRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA 120

Query: 121 RKYHPDVNKDPGSEDRFKEISAAYEV 147
           RKYHPDVNKDPGSEDRFKEISAAYEV
Sbjct: 121 RKYHPDVNKDPGSEDRFKEISAAYEV 146

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BLAST of CsGy1G004870 vs. NCBI nr
Match: XP_011649534.1 (PREDICTED: dnaJ homolog subfamily A member 3, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 296.6 bits (758), Expect = 4.9e-77
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MKSYTQPRARMMPPNGICSPCNANLNPAPKFRLLSLSAIPNVLHFPNPPSLYLGSSSNYS 60
           MKSYTQPRARMMPPNGICSPCNANLNPAPKFRLLSLSAIPNVLHFPNPPSLYLGSSSNYS
Sbjct: 1   MKSYTQPRARMMPPNGICSPCNANLNPAPKFRLLSLSAIPNVLHFPNPPSLYLGSSSNYS 60

Query: 61  GFSRLVGPPRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA 120
           GFSRLVGPPRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA
Sbjct: 61  GFSRLVGPPRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA 120

Query: 121 RKYHPDVNKDPGSEDRFKEISAAYEV 147
           RKYHPDVNKDPGSEDRFKEISAAYEV
Sbjct: 121 RKYHPDVNKDPGSEDRFKEISAAYEV 146

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BLAST of CsGy1G004870 vs. NCBI nr
Match: XP_011649542.1 (PREDICTED: dnaJ homolog subfamily A member 3, mitochondrial isoform X3 [Cucumis sativus])

HSP 1 Score: 296.6 bits (758), Expect = 4.9e-77
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MKSYTQPRARMMPPNGICSPCNANLNPAPKFRLLSLSAIPNVLHFPNPPSLYLGSSSNYS 60
           MKSYTQPRARMMPPNGICSPCNANLNPAPKFRLLSLSAIPNVLHFPNPPSLYLGSSSNYS
Sbjct: 1   MKSYTQPRARMMPPNGICSPCNANLNPAPKFRLLSLSAIPNVLHFPNPPSLYLGSSSNYS 60

Query: 61  GFSRLVGPPRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA 120
           GFSRLVGPPRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA
Sbjct: 61  GFSRLVGPPRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA 120

Query: 121 RKYHPDVNKDPGSEDRFKEISAAYEV 147
           RKYHPDVNKDPGSEDRFKEISAAYEV
Sbjct: 121 RKYHPDVNKDPGSEDRFKEISAAYEV 146

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BLAST of CsGy1G004870 vs. NCBI nr
Match: KGN63947.1 (hypothetical protein Csa_1G031710 [Cucumis sativus])

HSP 1 Score: 281.2 bits (718), Expect = 2.1e-72
Identity = 146/175 (83.43%), Postives = 146/175 (83.43%), Query Frame = 0


Query: 1   MKSYTQPRARMMPPNGICSPCNANLNPAPKFRLLSLSAIPNVLHFPNPPSLYLGSSSNYS 60
           MKSYTQPRARMMPPNGICSPCNANLNPAPKFRLLSLSAIPNVLHFPNPPSLYLGSSSNYS
Sbjct: 1   MKSYTQPRARMMPPNGICSPCNANLNPAPKFRLLSLSAIPNVLHFPNPPSLYLGSSSNYS 60

Query: 61  GFSRLVGPPRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA 120
           GFSRLVGPPRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA
Sbjct: 61  GFSRLVGPPRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA 120

Query: 121 RK-----------------------------YHPDVNKDPGSEDRFKEISAAYEV 147
           RK                             YHPDVNKDPGSEDRFKEISAAYEV
Sbjct: 121 RKYILDFYGASWSPVKRIRGLKIEWNCTVGGYHPDVNKDPGSEDRFKEISAAYEV 175

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BLAST of CsGy1G004870 vs. NCBI nr
Match: XP_008439676.1 (PREDICTED: chaperone protein DnaJ isoform X1 [Cucumis melo])

HSP 1 Score: 259.6 bits (662), Expect = 6.6e-66
Identity = 131/146 (89.73%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MKSYTQPRARMMPPNGICSPCNANLNPAPKFRLLSLSAIPNVLHFPNPPSLYLGSSSNYS 60
           MKSYTQPRA +MPPNGICSPCNANLN  PKFRLLSLSAIPN+LHFPN P+LY GSSSNYS
Sbjct: 16  MKSYTQPRA-IMPPNGICSPCNANLNLTPKFRLLSLSAIPNMLHFPNQPNLYFGSSSNYS 75

Query: 61  GFSRLVGPPRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA 120
           GFSRL GP R+ D QTRSRLTFVN GAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA
Sbjct: 76  GFSRLFGPLRRRDFQTRSRLTFVNCGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA 135

Query: 121 RKYHPDVNKDPGSEDRFKEISAAYEV 147
           RKYHPDVNK+PGSEDRFKEISAAYEV
Sbjct: 136 RKYHPDVNKEPGSEDRFKEISAAYEV 160

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BLAST of CsGy1G004870 vs. TAIR10
Match: AT3G17830.1 (Molecular chaperone Hsp40/DnaJ family protein)

HSP 1 Score: 99.8 bits (247), Expect = 1.6e-21
Identity = 46/57 (80.70%), Postives = 55/57 (96.49%), Query Frame = 0


Query: 90  TRAAATDHYSTLNVSRNATLQDIKNSYKKLARKYHPDVNKDPGSEDRFKEISAAYEV 147
           T AA TDHYSTLNV+RNATLQ+IK+SY+KLARKYHPD+NK+PG+ED+FK+ISAAYEV
Sbjct: 57  TMAAGTDHYSTLNVNRNATLQEIKSSYRKLARKYHPDMNKNPGAEDKFKQISAAYEV 113

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BLAST of CsGy1G004870 vs. TAIR10
Match: AT2G22360.1 (DNAJ heat shock family protein)

HSP 1 Score: 84.3 bits (207), Expect = 6.9e-17
Identity = 45/87 (51.72%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 60  SGFSRLVGPPRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKL 119
           +G SR + PPR+              G+  T  A  D+YS L VS+NAT  +IK++Y+KL
Sbjct: 64  TGMSRNMHPPRR--------------GSRFTVRADADYYSVLGVSKNATKAEIKSAYRKL 123

Query: 120 ARKYHPDVNKDPGSEDRFKEISAAYEV 147
           AR YHPDVNKDPG+E++FKEIS AYEV
Sbjct: 124 ARNYHPDVNKDPGAEEKFKEISNAYEV 136

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BLAST of CsGy1G004870 vs. TAIR10
Match: AT4G39960.1 (Molecular chaperone Hsp40/DnaJ family protein)

HSP 1 Score: 81.3 bits (199), Expect = 5.8e-16
Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 0


Query: 86  GAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLARKYHPDVNKDPGSEDRFKEISAAYE 145
           GA  T  A TD YS L VS+NAT  +IK++Y+KLAR YHPDVNKD G+ED+FKEIS AYE
Sbjct: 75  GARFTVRADTDFYSVLGVSKNATKAEIKSAYRKLARSYHPDVNKDAGAEDKFKEISNAYE 134

Query: 146 V 147
           +
Sbjct: 135 I 135

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BLAST of CsGy1G004870 vs. TAIR10
Match: AT1G80030.1 (Molecular chaperone Hsp40/DnaJ family protein)

HSP 1 Score: 73.2 bits (178), Expect = 1.6e-13
Identity = 50/122 (40.98%), Postives = 69/122 (56.56%), Query Frame = 0


Query: 33  LLSLSAIPNVLHFPNPPSLYLGSSSNYSGFS------RLVGPPRKMDSQTRSRLTFVNYG 92
           L S S IP+ L F          SSN+S FS      R       + S       + N  
Sbjct: 4   LASPSLIPSSLCFAAAADGPRSLSSNFSAFSDGGSNFRYHKSFLSLSSXXXXXTPYRNRR 63

Query: 93  AGATRAAAT--DHYSTLNVSRNATLQDIKNSYKKLARKYHPDVNKDPGSEDRFKEISAAY 147
             +    AT  D+Y+TL VS++A  ++IK +Y++LAR+YHPDVNK+PG+ ++FKEISAAY
Sbjct: 64  GRSLVVFATSGDYYATLGVSKSANNKEIKAAYRRLARQYHPDVNKEPGATEKFKEISAAY 123

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BLAST of CsGy1G004870 vs. TAIR10
Match: AT5G48030.1 (gametophytic factor 2)

HSP 1 Score: 64.3 bits (155), Expect = 7.4e-11
Identity = 36/90 (40.00%), Postives = 53/90 (58.89%), Query Frame = 0


Query: 58  NYSGFSRLVGPPRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYK 117
           N+ GF+   G  R              +G G++  +A D+YS L VS+NA   +IK +Y 
Sbjct: 68  NFGGFNTNFGSTRSF------------HGTGSSFMSAKDYYSVLGVSKNAQEGEIKKAYY 127

Query: 118 KLARKYHPDVNK-DPGSEDRFKEISAAYEV 147
            LA+K HPD+NK DP +E +F+E+S AYE+
Sbjct: 128 GLAKKLHPDMNKDDPEAETKFQEVSKAYEI 145

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BLAST of CsGy1G004870 vs. Swiss-Prot
Match: sp|Q9SJZ7|DNJA6_ARATH (Chaperone protein dnaJ A6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DJA6 PE=2 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-15
Identity = 45/87 (51.72%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 60  SGFSRLVGPPRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKL 119
           +G SR + PPR+              G+  T  A  D+YS L VS+NAT  +IK++Y+KL
Sbjct: 64  TGMSRNMHPPRR--------------GSRFTVRADADYYSVLGVSKNATKAEIKSAYRKL 123

Query: 120 ARKYHPDVNKDPGSEDRFKEISAAYEV 147
           AR YHPDVNKDPG+E++FKEIS AYEV
Sbjct: 124 ARNYHPDVNKDPGAEEKFKEISNAYEV 136

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BLAST of CsGy1G004870 vs. Swiss-Prot
Match: sp|P0DO01|DJA7A_ORYSJ (Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=DJA7A PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.7e-15
Identity = 49/107 (45.79%), Postives = 63/107 (58.88%), Query Frame = 0


Query: 49  PSLYLGSSSNYSGFSRLVGPPRKMDSQTRSRLTFVNYGAGATR---------AAATDHYS 108
           P   +  S +      LV P   + S+T SRL F +  +   R          A  D YS
Sbjct: 35  PRFLVSKSGSGGRLKHLVSPTASLQSRTSSRL-FNHAPSPRFRHRRSSRFIVRADADFYS 94

Query: 109 TLNVSRNATLQDIKNSYKKLARKYHPDVNKDPGSEDRFKEISAAYEV 147
           TL VSRNA+  +IK++Y+KLAR YHPDVNKDPG+E +FK+IS AYEV
Sbjct: 95  TLGVSRNASKSEIKSAYRKLARSYHPDVNKDPGAEQKFKDISNAYEV 140

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BLAST of CsGy1G004870 vs. Swiss-Prot
Match: sp|P0DO02|DJA7B_ORYSJ (Chaperone protein dnaJ A7B, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=DJA7B PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.7e-15
Identity = 49/107 (45.79%), Postives = 63/107 (58.88%), Query Frame = 0


Query: 49  PSLYLGSSSNYSGFSRLVGPPRKMDSQTRSRLTFVNYGAGATR---------AAATDHYS 108
           P   +  S +      LV P   + S+T SRL F +  +   R          A  D YS
Sbjct: 35  PRFLVSKSGSGGRLKHLVSPTASLQSRTSSRL-FNHAPSPRFRHRRSSRFIVRADADFYS 94

Query: 109 TLNVSRNATLQDIKNSYKKLARKYHPDVNKDPGSEDRFKEISAAYEV 147
           TL VSRNA+  +IK++Y+KLAR YHPDVNKDPG+E +FK+IS AYEV
Sbjct: 95  TLGVSRNASKSEIKSAYRKLARSYHPDVNKDPGAEQKFKDISNAYEV 140

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BLAST of CsGy1G004870 vs. Swiss-Prot
Match: sp|P0DO03|DJA8_ORYSJ (Chaperone protein dnaJ A8, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=DJA8 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.7e-15
Identity = 49/107 (45.79%), Postives = 63/107 (58.88%), Query Frame = 0


Query: 49  PSLYLGSSSNYSGFSRLVGPPRKMDSQTRSRLTFVNYGAGATR---------AAATDHYS 108
           P   +  S +      LV P   + S+T SRL F +  +   R          A  D YS
Sbjct: 35  PRFLVSKSGSGGRLKHLVSPTASLQSRTSSRL-FNHAPSPRFRHRRSSRFIVRADADFYS 94

Query: 109 TLNVSRNATLQDIKNSYKKLARKYHPDVNKDPGSEDRFKEISAAYEV 147
           TL VSRNA+  +IK++Y+KLAR YHPDVNKDPG+E +FK+IS AYEV
Sbjct: 95  TLGVSRNASKSEIKSAYRKLARSYHPDVNKDPGAEQKFKDISNAYEV 140

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BLAST of CsGy1G004870 vs. Swiss-Prot
Match: sp|Q7NDG8|DNAJ_GLOVI (Chaperone protein DnaJ OS=Gloeobacter violaceus (strain PCC 7421) OX=251221 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.2e-14
Identity = 37/53 (69.81%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 94  ATDHYSTLNVSRNATLQDIKNSYKKLARKYHPDVNKDPGSEDRFKEISAAYEV 147
           A D Y TLNVSR+A+ +DIK +Y+KLAR+YHPDVNKD G+ED FKE+S AYEV
Sbjct: 2   ARDLYETLNVSRDASKEDIKRAYRKLARQYHPDVNKDAGAEDTFKELSRAYEV 54

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BLAST of CsGy1G004870 vs. TrEMBL
Match: tr|A0A0A0LT51|A0A0A0LT51_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G031710 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.4e-72
Identity = 146/175 (83.43%), Postives = 146/175 (83.43%), Query Frame = 0


Query: 1   MKSYTQPRARMMPPNGICSPCNANLNPAPKFRLLSLSAIPNVLHFPNPPSLYLGSSSNYS 60
           MKSYTQPRARMMPPNGICSPCNANLNPAPKFRLLSLSAIPNVLHFPNPPSLYLGSSSNYS
Sbjct: 1   MKSYTQPRARMMPPNGICSPCNANLNPAPKFRLLSLSAIPNVLHFPNPPSLYLGSSSNYS 60

Query: 61  GFSRLVGPPRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA 120
           GFSRLVGPPRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA
Sbjct: 61  GFSRLVGPPRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA 120

Query: 121 RK-----------------------------YHPDVNKDPGSEDRFKEISAAYEV 147
           RK                             YHPDVNKDPGSEDRFKEISAAYEV
Sbjct: 121 RKYILDFYGASWSPVKRIRGLKIEWNCTVGGYHPDVNKDPGSEDRFKEISAAYEV 175

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BLAST of CsGy1G004870 vs. TrEMBL
Match: tr|A0A1S4DUT2|A0A1S4DUT2_CUCME (chaperone protein DnaJ isoform X4 OS=Cucumis melo OX=3656 GN=LOC103484140 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 4.4e-66
Identity = 131/146 (89.73%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MKSYTQPRARMMPPNGICSPCNANLNPAPKFRLLSLSAIPNVLHFPNPPSLYLGSSSNYS 60
           MKSYTQPRA +MPPNGICSPCNANLN  PKFRLLSLSAIPN+LHFPN P+LY GSSSNYS
Sbjct: 16  MKSYTQPRA-IMPPNGICSPCNANLNLTPKFRLLSLSAIPNMLHFPNQPNLYFGSSSNYS 75

Query: 61  GFSRLVGPPRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA 120
           GFSRL GP R+ D QTRSRLTFVN GAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA
Sbjct: 76  GFSRLFGPLRRRDFQTRSRLTFVNCGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA 135

Query: 121 RKYHPDVNKDPGSEDRFKEISAAYEV 147
           RKYHPDVNK+PGSEDRFKEISAAYEV
Sbjct: 136 RKYHPDVNKEPGSEDRFKEISAAYEV 160

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BLAST of CsGy1G004870 vs. TrEMBL
Match: tr|A0A1S3AZY1|A0A1S3AZY1_CUCME (chaperone protein DnaJ isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484140 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 4.4e-66
Identity = 131/146 (89.73%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MKSYTQPRARMMPPNGICSPCNANLNPAPKFRLLSLSAIPNVLHFPNPPSLYLGSSSNYS 60
           MKSYTQPRA +MPPNGICSPCNANLN  PKFRLLSLSAIPN+LHFPN P+LY GSSSNYS
Sbjct: 16  MKSYTQPRA-IMPPNGICSPCNANLNLTPKFRLLSLSAIPNMLHFPNQPNLYFGSSSNYS 75

Query: 61  GFSRLVGPPRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA 120
           GFSRL GP R+ D QTRSRLTFVN GAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA
Sbjct: 76  GFSRLFGPLRRRDFQTRSRLTFVNCGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA 135

Query: 121 RKYHPDVNKDPGSEDRFKEISAAYEV 147
           RKYHPDVNK+PGSEDRFKEISAAYEV
Sbjct: 136 RKYHPDVNKEPGSEDRFKEISAAYEV 160

[Close]

BLAST of CsGy1G004870 vs. TrEMBL
Match: tr|A0A1S3B179|A0A1S3B179_CUCME (chaperone protein DnaJ isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484140 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 4.4e-66
Identity = 131/146 (89.73%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MKSYTQPRARMMPPNGICSPCNANLNPAPKFRLLSLSAIPNVLHFPNPPSLYLGSSSNYS 60
           MKSYTQPRA +MPPNGICSPCNANLN  PKFRLLSLSAIPN+LHFPN P+LY GSSSNYS
Sbjct: 16  MKSYTQPRA-IMPPNGICSPCNANLNLTPKFRLLSLSAIPNMLHFPNQPNLYFGSSSNYS 75

Query: 61  GFSRLVGPPRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA 120
           GFSRL GP R+ D QTRSRLTFVN GAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA
Sbjct: 76  GFSRLFGPLRRRDFQTRSRLTFVNCGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLA 135

Query: 121 RKYHPDVNKDPGSEDRFKEISAAYEV 147
           RKYHPDVNK+PGSEDRFKEISAAYEV
Sbjct: 136 RKYHPDVNKEPGSEDRFKEISAAYEV 160

[Close]

BLAST of CsGy1G004870 vs. TrEMBL
Match: tr|A0A1S3B2L3|A0A1S3B2L3_CUCME (chaperone protein DnaJ isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484140 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 9.2e-24
Identity = 63/78 (80.77%), Postives = 66/78 (84.62%), Query Frame = 0


Query: 69  PRKMDSQTRSRLTFVNYGAGATRAAATDHYSTLNVSRNATLQDIKNSYKKLARKYHPDVN 128
           P  M S T+ R   +    GATRAAATDHYSTLNVSRNATLQDIKNSYKKLARKYHPDVN
Sbjct: 13  PASMKSYTQPRA--IMPPNGATRAAATDHYSTLNVSRNATLQDIKNSYKKLARKYHPDVN 72

Query: 129 KDPGSEDRFKEISAAYEV 147
           K+PGSEDRFKEISAAYEV
Sbjct: 73  KEPGSEDRFKEISAAYEV 88

The following BLAST results are available for this feature:

BLAST of CsGy1G004870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649531.1	4.9e-77	100.00	PREDICTED: chaperone protein dnaJ 1, mitochondrial isoform X1 [Cucumis sativus]	[more]
XP_011649534.1	4.9e-77	100.00	PREDICTED: dnaJ homolog subfamily A member 3, mitochondrial isoform X2 [Cucumis ...	[more]
XP_011649542.1	4.9e-77	100.00	PREDICTED: dnaJ homolog subfamily A member 3, mitochondrial isoform X3 [Cucumis ...	[more]
KGN63947.1	2.1e-72	83.43	hypothetical protein Csa_1G031710 [Cucumis sativus]	[more]
XP_008439676.1	6.6e-66	89.73	PREDICTED: chaperone protein DnaJ isoform X1 [Cucumis melo]	[more]

BLAST of CsGy1G004870 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G17830.1	1.6e-21	80.70	Molecular chaperone Hsp40/DnaJ family protein	[more]
AT2G22360.1	6.9e-17	51.72	DNAJ heat shock family protein	[more]
AT4G39960.1	5.8e-16	65.57	Molecular chaperone Hsp40/DnaJ family protein	[more]
AT1G80030.1	1.6e-13	40.98	Molecular chaperone Hsp40/DnaJ family protein	[more]
AT5G48030.1	7.4e-11	40.00	gametophytic factor 2	[more]

BLAST of CsGy1G004870 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SJZ7\|DNJA6_ARATH	1.2e-15	51.72	Chaperone protein dnaJ A6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DJA6...	[more]
sp\|P0DO01\|DJA7A_ORYSJ	4.7e-15	45.79	Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica OX=399...	[more]
sp\|P0DO02\|DJA7B_ORYSJ	4.7e-15	45.79	Chaperone protein dnaJ A7B, chloroplastic OS=Oryza sativa subsp. japonica OX=399...	[more]
sp\|P0DO03\|DJA8_ORYSJ	4.7e-15	45.79	Chaperone protein dnaJ A8, chloroplastic OS=Oryza sativa subsp. japonica OX=3994...	[more]
sp\|Q7NDG8\|DNAJ_GLOVI	5.2e-14	69.81	Chaperone protein DnaJ OS=Gloeobacter violaceus (strain PCC 7421) OX=251221 GN=d...	[more]

BLAST of CsGy1G004870 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LT51\|A0A0A0LT51_CUCSA	1.4e-72	83.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G031710 PE=4 SV=1	[more]
tr\|A0A1S4DUT2\|A0A1S4DUT2_CUCME	4.4e-66	89.73	chaperone protein DnaJ isoform X4 OS=Cucumis melo OX=3656 GN=LOC103484140 PE=3 S...	[more]
tr\|A0A1S3AZY1\|A0A1S3AZY1_CUCME	4.4e-66	89.73	chaperone protein DnaJ isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484140 PE=3 S...	[more]
tr\|A0A1S3B179\|A0A1S3B179_CUCME	4.4e-66	89.73	chaperone protein DnaJ isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484140 PE=3 S...	[more]
tr\|A0A1S3B2L3\|A0A1S3B2L3_CUCME	9.2e-24	80.77	chaperone protein DnaJ isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484140 PE=3 S...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036869	J_dom_sf
IPR001623	DnaJ_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G004870.1	CsGy1G004870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 116..131 score: 58.82 coord: 132..152 score: 35.82 coord: 98..116 score: 42.06
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 95..152 e-value: 5.0E-20 score: 82.5
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 96..146 e-value: 1.2E-18 score: 66.9
IPR001623	DnaJ domain	PROSITE	PS50076	DNAJ_2	coord: 96..152 score: 14.667
IPR001623	DnaJ domain	CDD	cd06257	DnaJ	coord: 96..146 e-value: 8.96164E-21 score: 80.2821
IPR036869	Chaperone J-domain superfamily	GENE3D	G3DSA:1.10.287.110		coord: 73..150 e-value: 8.4E-21 score: 75.7
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	SSF46565	Chaperone J-domain	coord: 92..146
None	No IPR available	PANTHER	PTHR43096	FAMILY NOT NAMED	coord: 57..146
None	No IPR available	PANTHER	PTHR43096:SF26	SUBFAMILY NOT NAMED	coord: 57..146

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G004870	Csa1G031710	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G004870	CSPI01G05080	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G004870	CmaCh01G007430	Cucurbita maxima (Rimu)	cgybcmaB111
CsGy1G004870	CmoCh01G007770	Cucurbita moschata (Rifu)	cgybcmoB106
CsGy1G004870	CsaV3_1G004980	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G004870	Bhi08G001582	Wax gourd	cgybwgoB055
CsGy1G004870	Carg07000	Silver-seed gourd	carcgybB0522

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G004870	Cucurbita maxima (Rimu)	cgybcmaB105
CsGy1G004870	Cucurbita moschata (Rifu)	cgybcmoB099
CsGy1G004870	Cucurbita pepo (Zucchini)	cgybcpeB098
CsGy1G004870	Bottle gourd (USVL1VR-Ls)	cgyblsiB018
CsGy1G004870	Bottle gourd (USVL1VR-Ls)	cgyblsiB033
CsGy1G004870	Melon (DHL92) v3.5.1	cgybmeB018
CsGy1G004870	Melon (DHL92) v3.6.1	cgybmedB016
CsGy1G004870	Watermelon (Charleston Gray)	cgybwcgB051
CsGy1G004870	Watermelon (Charleston Gray)	cgybwcgB053
CsGy1G004870	Watermelon (97103) v1	cgybwmB062
CsGy1G004870	Watermelon (97103) v1	cgybwmB064
CsGy1G004870	Silver-seed gourd	carcgybB0526
CsGy1G004870	Watermelon (97103) v2	cgybwmbB051
CsGy1G004870	Watermelon (97103) v2	cgybwmbB053
CsGy1G004870	Wax gourd	cgybwgoB031