CsGy1G003970 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATAGCCATTGAAAAGAAAACTAAAAGTGATGAATATATAAATCCTCTATTATCTCAGCAACCATTGATATCTACAATCTCTTTTTCCTTCTCTCTCTCTCTGCTTCGGTTTCTCCTTTCATGTCTACGGTATGCTCAAACCCTAATTCTAAGTCCTCATCACTTTTTCATTTTTGCTGTTCAATTCATACTTACTTACACAACAAATATATTTTAACTTTTTTCTTTTCTCACTTTAGTTGTTCTTCATCATTGCTTTCTCTAAATTTCAATTTATGTGTACCTTCTTTTGATGATAAATTATAAACGAGTATATAAATGAGTACTTTTGGAAACGAAAGAACTAAGTTTAGACCAAAAAGAGTTATATGACTGAATTTTATACTATATTTAGCTCTAATTTAAGAAGATATATATAAACTTGACTCATTTTTATTTTTGAGGAAGAAGATCATGGAGAGAAAAGGAAAAATAAAAAGAGGAAAACAAAGTAAAAGTAAAATAATATTAAAAGAATAATTTGTTTTTAACAATATTTCATTTTTTCTATATTATATAAGGATGTAATAAATAAACTAATAATTGAAACAAAAATTAAATAAGTTCATCAACTTTCAATTTCATGTCAATTTAAGATGAGATGTTCGTATACGTCTGTCTATTGTTTCCAACTTTAGTATTTTACTTTTTCAAAAATCAATTTTGTATCAAATAAAGAAATAATAATACATTATTCTTCAACTCTCAATTTTGTATTTTATAAATTCCTCTAACTATATTCAATATTTTTTAAACTAAACAAATAGCATGAAATTAAATTTTATTTGTTTAGCAAATTAAAAAATATTAGATATTGAATTGTAATATAAAAAAAAATACTTTTTAATCTAAAAAGATCCAAAAATTTCAATTTCAAAGTTTTAAGGACTAAATTACAAGTTTAAAAATTAATTTAAAAAAAAACTAATATTATTACAATAGTAAAAGTAAAGGTTCTTCATATAATATTCAATATATAGTGGCCCTATAACATTATTATTACTACTACTACTATTATTATTCGTTTGATATAATTATATTGTTTCATCCCCCTTTTTGTAATTAGTGCCCTCTATTATTCTTTTAATTACTTGTAATTTTAGAAATTAATGTATATGTGGACATCAAGTATTTACATTATTGAAGTTTTTCCCATTAGAGAGTTAAATACTATTTAAAAATTTTCCTCTATTTATCATAGTTAATAATAATATTTTTGATGCGATAATTAGTGACCTTCTACCTTGTTTTACTATTTTGTTATTTTTTCAGATAAAAACAATGTTATTCCATCATTGGTTTCTCCAATTTACACTCATAGTGACACTATTCCTAAACTCGGAAGCCATTCAAATAAACCACCAAACCCTAAAGACCCAATCTTTTCTCTCCCCATTATTCACTTTAACTCCTGGCTCAGTAATTGAAAAATTCTACTACAATCTCAACTTTCCCAAAGGCCATATTGCAATAAAGAGCTTTGATGCCGAAGTTGTCGATGAACAAGGTAACCCCGTCTCGCTTTTCGACACATATCTCCATCACTGGACACTCGTAAGATATTACCAACACAACAAAACCACAACAACAAATCATACGACAAATACAAACTCTATTATTATCGCGGGTAATAATGGAGTTTGCCAACCAAATACATTATCGTATTTTTATGGTATGGGAACCGAAGCGAGGAAAACATCAAATTTTCTTCCTGACCCATATGGAATTGAAGTTGGGAATGAAAAGGAAGTTCCTTTAGGGTTTGAAGAGAAGTGGGTTCTTAATGTTCATGCCATTGATACTAGAGGTGTGGTGGATAGAGTTGGATGTCTTGAGTGTAAATGTAGTTTGTATGATGTTAGCAAAGATGAATTGGATGATGATTATATAGGAGGATTTAAATGTTGTTATGATAAAGCTCAATGTAAAGTGAGGGAAGGTTATAATGGAGAGGAAAGTAATTTGTATATGAAATATACAGTGCAATGGGTTGATTGGGATGATGATTTTGTGATTCCTGTTAAAGTTTATGTAATTGATGTGACTGATACTTGGAAGCCGTCGATGGACTCATCGGGATTAATATCTCAAGAACATGACTGTAAGGTACGTCATCAATTTAACTACATTGATCTCTCGTTAATTTCGTAATTATTTTGGCTATGATTTTAGTGACTTTAACTTCTCTGTGCATATGCACATAGGTTGAGTATGATGTAGAATCTTGCTCCCTCAAAAACAAGTTGCATGGGAAGTGTAATGCTAACAAAAGGTCAAAGGTGATGTTTCAAGACACTGGATTCATTGTGTATGGAGCGGCTCATCAACACATTGGTGCAACCGGTGCAACCCTCTACGGAGAGGTATATAATAATCTAAAATCCATTATATATACTTGGTTTATAACCAAATGATTTATTTTGATCTATACACACATTCAATTATCTTTAAACGGTTAAGTTATACGTTCTACGACATTGTAAAACAGGATGGGAGAGTTTTATGTTCCTCGTCACCAATATATGGAGAAGGAGACGAAATAGGAAATGAAGAAGGATATATTGTTGGAATGTCAACTTGTTATCCAAAATTAGGGGATGTGAAGATTAATAAAGGAGAAATAGGGAGTTTTGTATCAAAGTATGATCCTACACAAAACCACACAGGTGTTATGGGTATCTTTAGTATTGTGGTTGCTACCAAATTACCTAACTCATTGTCTCACATGGAAGTATGAGCAATAAATCTTGGTTAGTCACATCCTAAAGAAATTAAATAATTCATGTGAAACTTATTATTGTATTCACATATATGATATTTTGTGTAAAATTTGGCTTGTGTTTAATAGTATCTATATATGTATAAAAATTATCTACATATTTACTTTATATCATTATCACTTTGAG CATAGCCATTGAAAAGAAAACTAAAAGTGATGAATATATAAATCCTCTATTATCTCAGCAACCATTGATATCTACAATCTCTTTTTCCTTCTCTCTCTCTCTGCTTCGGTTTCTCCTTTCATGTCTACGATAAAAACAATGTTATTCCATCATTGGTTTCTCCAATTTACACTCATAGTGACACTATTCCTAAACTCGGAAGCCATTCAAATAAACCACCAAACCCTAAAGACCCAATCTTTTCTCTCCCCATTATTCACTTTAACTCCTGGCTCAGTAATTGAAAAATTCTACTACAATCTCAACTTTCCCAAAGGCCATATTGCAATAAAGAGCTTTGATGCCGAAGTTGTCGATGAACAAGGTAACCCCGTCTCGCTTTTCGACACATATCTCCATCACTGGACACTCGTAAGATATTACCAACACAACAAAACCACAACAACAAATCATACGACAAATACAAACTCTATTATTATCGCGGGTAATAATGGAGTTTGCCAACCAAATACATTATCGTATTTTTATGGTATGGGAACCGAAGCGAGGAAAACATCAAATTTTCTTCCTGACCCATATGGAATTGAAGTTGGGAATGAAAAGGAAGTTCCTTTAGGGTTTGAAGAGAAGTGGGTTCTTAATGTTCATGCCATTGATACTAGAGGTGTGGTGGATAGAGTTGGATGTCTTGAGTGTAAATGTAGTTTGTATGATGTTAGCAAAGATGAATTGGATGATGATTATATAGGAGGATTTAAATGTTGTTATGATAAAGCTCAATGTAAAGTGAGGGAAGGTTATAATGGAGAGGAAAGTAATTTGTATATGAAATATACAGTGCAATGGGTTGATTGGGATGATGATTTTGTGATTCCTGTTAAAGTTTATGTAATTGATGTGACTGATACTTGGAAGCCGTCGATGGACTCATCGGGATTAATATCTCAAGAACATGACTGTAAGGTTGAGTATGATGTAGAATCTTGCTCCCTCAAAAACAAGTTGCATGGGAAGTGTAATGCTAACAAAAGGTCAAAGGTGATGTTTCAAGACACTGGATTCATTGTGTATGGAGCGGCTCATCAACACATTGGTGCAACCGGTGCAACCCTCTACGGAGAGGATGGGAGAGTTTTATGTTCCTCGTCACCAATATATGGAGAAGGAGACGAAATAGGAAATGAAGAAGGATATATTGTTGGAATGTCAACTTGTTATCCAAAATTAGGGGATGTGAAGATTAATAAAGGAGAAATAGGGAGTTTTGTATCAAAGTATGATCCTACACAAAACCACACAGGTGTTATGGGTATCTTTAGTATTGTGGTTGCTACCAAATTACCTAACTCATTGTCTCACATGGAAGTATGAGCAATAAATCTTGGTTAGTCACATCCTAAAGAAATTAAATAATTCATGTGAAACTTATTATTGTATTCACATATATGATATTTTGTGTAAAATTTGGCTTGTGTTTAATAGTATCTATATATGTATAAAAATTATCTACATATTTACTTTATATCATTATCACTTTGAG ATGTCTACGATAAAAACAATGTTATTCCATCATTGGTTTCTCCAATTTACACTCATAGTGACACTATTCCTAAACTCGGAAGCCATTCAAATAAACCACCAAACCCTAAAGACCCAATCTTTTCTCTCCCCATTATTCACTTTAACTCCTGGCTCAGTAATTGAAAAATTCTACTACAATCTCAACTTTCCCAAAGGCCATATTGCAATAAAGAGCTTTGATGCCGAAGTTGTCGATGAACAAGGTAACCCCGTCTCGCTTTTCGACACATATCTCCATCACTGGACACTCGTAAGATATTACCAACACAACAAAACCACAACAACAAATCATACGACAAATACAAACTCTATTATTATCGCGGGTAATAATGGAGTTTGCCAACCAAATACATTATCGTATTTTTATGGTATGGGAACCGAAGCGAGGAAAACATCAAATTTTCTTCCTGACCCATATGGAATTGAAGTTGGGAATGAAAAGGAAGTTCCTTTAGGGTTTGAAGAGAAGTGGGTTCTTAATGTTCATGCCATTGATACTAGAGGTGTGGTGGATAGAGTTGGATGTCTTGAGTGTAAATGTAGTTTGTATGATGTTAGCAAAGATGAATTGGATGATGATTATATAGGAGGATTTAAATGTTGTTATGATAAAGCTCAATGTAAAGTGAGGGAAGGTTATAATGGAGAGGAAAGTAATTTGTATATGAAATATACAGTGCAATGGGTTGATTGGGATGATGATTTTGTGATTCCTGTTAAAGTTTATGTAATTGATGTGACTGATACTTGGAAGCCGTCGATGGACTCATCGGGATTAATATCTCAAGAACATGACTGTAAGGTTGAGTATGATGTAGAATCTTGCTCCCTCAAAAACAAGTTGCATGGGAAGTGTAATGCTAACAAAAGGTCAAAGGTGATGTTTCAAGACACTGGATTCATTGTGTATGGAGCGGCTCATCAACACATTGGTGCAACCGGTGCAACCCTCTACGGAGAGGATGGGAGAGTTTTATGTTCCTCGTCACCAATATATGGAGAAGGAGACGAAATAGGAAATGAAGAAGGATATATTGTTGGAATGTCAACTTGTTATCCAAAATTAGGGGATGTGAAGATTAATAAAGGAGAAATAGGGAGTTTTGTATCAAAGTATGATCCTACACAAAACCACACAGGTGTTATGGGTATCTTTAGTATTGTGGTTGCTACCAAATTACCTAACTCATTGTCTCACATGGAAGTATGA MSTIKTMLFHHWFLQFTLIVTLFLNSEAIQINHQTLKTQSFLSPLFTLTPGSVIEKFYYNLNFPKGHIAIKSFDAEVVDEQGNPVSLFDTYLHHWTLVRYYQHNKTTTTNHTTNTNSIIIAGNNGVCQPNTLSYFYGMGTEARKTSNFLPDPYGIEVGNEKEVPLGFEEKWVLNVHAIDTRGVVDRVGCLECKCSLYDVSKDELDDDYIGGFKCCYDKAQCKVREGYNGEESNLYMKYTVQWVDWDDDFVIPVKVYVIDVTDTWKPSMDSSGLISQEHDCKVEYDVESCSLKNKLHGKCNANKRSKVMFQDTGFIVYGAAHQHIGATGATLYGEDGRVLCSSSPIYGEGDEIGNEEGYIVGMSTCYPKLGDVKINKGEIGSFVSKYDPTQNHTGVMGIFSIVVATKLPNSLSHMEV
BLAST of CsGy1G003970 vs. NCBI nr
Match: XP_004137324.1 (PREDICTED: uncharacterized protein LOC101215981 [Cucumis sativus]) HSP 1 Score: 812.0 bits (2096), Expect = 9.4e-232 Identity = 414/416 (99.52%), Postives = 414/416 (99.52%), Query Frame = 0
BLAST of CsGy1G003970 vs. NCBI nr
Match: XP_008453444.1 (PREDICTED: uncharacterized protein LOC103494150 [Cucumis melo]) HSP 1 Score: 753.4 bits (1944), Expect = 4.0e-214 Identity = 361/414 (87.20%), Postives = 372/414 (89.86%), Query Frame = 0
BLAST of CsGy1G003970 vs. NCBI nr
Match: KGN43818.1 (hypothetical protein Csa_7G069440 [Cucumis sativus]) HSP 1 Score: 507.7 bits (1306), Expect = 3.8e-140 Identity = 240/431 (55.68%), Postives = 306/431 (71.00%), Query Frame = 0
BLAST of CsGy1G003970 vs. NCBI nr
Match: XP_011658854.1 (PREDICTED: uncharacterized protein LOC101210001 [Cucumis sativus]) HSP 1 Score: 506.5 bits (1303), Expect = 8.5e-140 Identity = 238/431 (55.22%), Postives = 305/431 (70.77%), Query Frame = 0
BLAST of CsGy1G003970 vs. NCBI nr
Match: XP_023515680.1 (uncharacterized protein LOC111779774 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 506.1 bits (1302), Expect = 1.1e-139 Identity = 239/413 (57.87%), Postives = 304/413 (73.61%), Query Frame = 0
BLAST of CsGy1G003970 vs. TAIR10
Match: AT5G61820.1 (FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 367.1 bits (941), Expect = 1.5e-101 Identity = 187/397 (47.10%), Postives = 246/397 (61.96%), Query Frame = 0
BLAST of CsGy1G003970 vs. TrEMBL
Match: tr|A0A1S3BVP7|A0A1S3BVP7_CUCME (uncharacterized protein LOC103494150 OS=Cucumis melo OX=3656 GN=LOC103494150 PE=4 SV=1) HSP 1 Score: 753.4 bits (1944), Expect = 2.6e-214 Identity = 361/414 (87.20%), Postives = 372/414 (89.86%), Query Frame = 0
BLAST of CsGy1G003970 vs. TrEMBL
Match: tr|A0A0A0K2U1|A0A0A0K2U1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G069440 PE=4 SV=1) HSP 1 Score: 507.7 bits (1306), Expect = 2.5e-140 Identity = 240/431 (55.68%), Postives = 306/431 (71.00%), Query Frame = 0
BLAST of CsGy1G003970 vs. TrEMBL
Match: tr|A0A1S3C023|A0A1S3C023_CUCME (uncharacterized protein LOC103495342 OS=Cucumis melo OX=3656 GN=LOC103495342 PE=4 SV=1) HSP 1 Score: 498.4 bits (1282), Expect = 1.5e-137 Identity = 242/434 (55.76%), Postives = 306/434 (70.51%), Query Frame = 0
BLAST of CsGy1G003970 vs. TrEMBL
Match: tr|A0A0A0LS56|A0A0A0LS56_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024275 PE=4 SV=1) HSP 1 Score: 458.4 bits (1178), Expect = 1.7e-125 Identity = 232/422 (54.98%), Postives = 292/422 (69.19%), Query Frame = 0
BLAST of CsGy1G003970 vs. TrEMBL
Match: tr|A0A1Q3CNW4|A0A1Q3CNW4_CEPFO (SURNod19 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_25207 PE=4 SV=1) HSP 1 Score: 456.4 bits (1173), Expect = 6.6e-125 Identity = 208/415 (50.12%), Postives = 286/415 (68.92%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |