CsGy1G003760 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G003760
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 2364190 .. 2364946 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATATTTTCAGGTACTTTACTCTTTCCCTTAAAGGCCTTTGTTTGGTGGCCTGAGATTCCTTACGTGCTTTGGATCTATATGATACTGGTAATGAATTCTCCCAAGTAACTGTGAGGATACTACTAAACATTTAGCTGGATTAAAATATATTTTATGGTACGGCAGTCTTAGGATTATTCATTTAGATCAGAAAGGATCCCTCTTTCCTCTGCCCTTGCAATTCAGCCCGAGTCACCTGGTGGAAACAATTGAAAAACAGAACATTATTATTTAAATCTTCTATCATCTGATTCAACTTCATGTTAAAGAGTTAAACACAATCTGATCCACAGTTCCTCGCTTCTATAACTAAGTCGAATGTCCTCATTTCGGTCCCCATACCAGGTTGAAGGATGTGGAAAATGTAACAATCCCGAACCCAATTTCTGCCTTAGTTGGCCCGAACACTTTCATTGCTGTTTCCCATCGAAAGCTGGGTAATTTACAAGAAGCTCTGGGTCATTTGCTTCAAGTTCAATCCAAAACGGGTATGATTTATTTTCTTCTTTGAAGAATGGAGTAATGGGTTCCTCTAGATTCTGTAGAGACATTATTCTTTTTCTAATCTTTCCTTCTCATTTTTTTCTTTTGTAAATTCAATTCGGATAACTTTTTAGCTCACAAAGTGCAGGAATTATGTATGAATTCAGCCAATATCTGGTTCTATGCCGCTTCCAAATGGGCTCCCTATTTATTAATATATTGTGTATTTGA

mRNA sequence

ATGCATATTTTCAGGTTGAAGGATGTGGAAAATGTAACAATCCCGAACCCAATTTCTGCCTTAGTTGGCCCGAACACTTTCATTGCTGTTTCCCATCGAAAGCTGGGTAATTTACAAGAAGCTCTGGGTCATTTGCTTCAAGTTCAATCCAAAACGGGAATTATGTATGAATTCAGCCAATATCTGGTTCTATGCCGCTTCCAAATGGGCTCCCTATTTATTAATATATTGTGTATTTGA

Coding sequence (CDS)

ATGCATATTTTCAGGTTGAAGGATGTGGAAAATGTAACAATCCCGAACCCAATTTCTGCCTTAGTTGGCCCGAACACTTTCATTGCTGTTTCCCATCGAAAGCTGGGTAATTTACAAGAAGCTCTGGGTCATTTGCTTCAAGTTCAATCCAAAACGGGAATTATGTATGAATTCAGCCAATATCTGGTTCTATGCCGCTTCCAAATGGGCTCCCTATTTATTAATATATTGTGTATTTGA

Protein sequence

MHIFRLKDVENVTIPNPISALVGPNTFIAVSHRKLGNLQEALGHLLQVQSKTGIMYEFSQYLVLCRFQMGSLFINILCI
Homology
[Close]
BLAST of CsGy1G003760 vs. NCBI nr
Match: KGN63822.1 (hypothetical protein Csa_1G023590 [Cucumis sativus])

HSP 1 Score: 159.1 bits (401), Expect = 6.3e-36
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MHIFRLKDVENVTIPNPISALVGPNTFIAVSHRKLGNLQEALGHLLQVQSKTGIMYEFSQ 60
          MHIFRLKDVENVTIPNPISALVGPNTFIAVSHRKLGNLQEALGHLLQVQSKTGIMYEFSQ
Sbjct: 1  MHIFRLKDVENVTIPNPISALVGPNTFIAVSHRKLGNLQEALGHLLQVQSKTGIMYEFSQ 60

Query: 61 YLVLCRFQMGSLFINILCI 80
          YLVLCRFQMGSLFINILCI
Sbjct: 61 YLVLCRFQMGSLFINILCI 79

[Close]
BLAST of CsGy1G003760 vs. TrEMBL
Match: tr|A0A0A0LSN6|A0A0A0LSN6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G023590 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.2e-36
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MHIFRLKDVENVTIPNPISALVGPNTFIAVSHRKLGNLQEALGHLLQVQSKTGIMYEFSQ 60
          MHIFRLKDVENVTIPNPISALVGPNTFIAVSHRKLGNLQEALGHLLQVQSKTGIMYEFSQ
Sbjct: 1  MHIFRLKDVENVTIPNPISALVGPNTFIAVSHRKLGNLQEALGHLLQVQSKTGIMYEFSQ 60

Query: 61 YLVLCRFQMGSLFINILCI 80
          YLVLCRFQMGSLFINILCI
Sbjct: 61 YLVLCRFQMGSLFINILCI 79

The following BLAST results are available for this feature:
BLAST of CsGy1G003760 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63822.16.3e-36100.00hypothetical protein Csa_1G023590 [Cucumis sativus][more]
BLAST of CsGy1G003760 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G003760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G003760 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LSN6|A0A0A0LSN6_CUCSA4.2e-36100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G023590 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G003760.1CsGy1G003760.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G003760Csa1G023590Cucumber (Chinese Long) v2cgybcuB001
CsGy1G003760CsaV3_1G003850Cucumber (Chinese Long) v3cgybcucB002
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G003760Wild cucumber (PI 183967)cgybcpiB001
CsGy1G003760Wild cucumber (PI 183967)cgybcpiB003
CsGy1G003760Wild cucumber (PI 183967)cgybcpiB030
CsGy1G003760Silver-seed gourdcarcgybB0394
CsGy1G003760Silver-seed gourdcarcgybB0468
CsGy1G003760Silver-seed gourdcarcgybB0519
CsGy1G003760Silver-seed gourdcarcgybB0594
CsGy1G003760Silver-seed gourdcarcgybB0830
CsGy1G003760Cucumber (Chinese Long) v3cgybcucB004
CsGy1G003760Cucumber (Chinese Long) v3cgybcucB038
CsGy1G003760Watermelon (97103) v2cgybwmbB054
CsGy1G003760Watermelon (97103) v2cgybwmbB059
CsGy1G003760Watermelon (97103) v2cgybwmbB077
CsGy1G003760Wax gourdcgybwgoB011
CsGy1G003760Wax gourdcgybwgoB036
CsGy1G003760Wax gourdcgybwgoB068
CsGy1G003760Cucumber (Gy14) v2cgybcgybB002
CsGy1G003760Cucumber (Gy14) v2cgybcgybB028
CsGy1G003760Cucurbita maxima (Rimu)cgybcmaB018
CsGy1G003760Cucurbita maxima (Rimu)cgybcmaB029
CsGy1G003760Cucurbita maxima (Rimu)cgybcmaB077
CsGy1G003760Cucurbita maxima (Rimu)cgybcmaB088
CsGy1G003760Cucurbita maxima (Rimu)cgybcmaB098
CsGy1G003760Cucurbita maxima (Rimu)cgybcmaB131
CsGy1G003760Cucurbita moschata (Rifu)cgybcmoB017
CsGy1G003760Cucurbita moschata (Rifu)cgybcmoB028
CsGy1G003760Cucurbita moschata (Rifu)cgybcmoB071
CsGy1G003760Cucurbita moschata (Rifu)cgybcmoB091
CsGy1G003760Cucurbita moschata (Rifu)cgybcmoB123
CsGy1G003760Cucurbita pepo (Zucchini)cgybcpeB010
CsGy1G003760Cucurbita pepo (Zucchini)cgybcpeB020
CsGy1G003760Cucurbita pepo (Zucchini)cgybcpeB041
CsGy1G003760Cucurbita pepo (Zucchini)cgybcpeB063
CsGy1G003760Cucurbita pepo (Zucchini)cgybcpeB073
CsGy1G003760Cucurbita pepo (Zucchini)cgybcpeB096
CsGy1G003760Cucurbita pepo (Zucchini)cgybcpeB127
CsGy1G003760Cucumber (Chinese Long) v2cgybcuB004
CsGy1G003760Cucumber (Chinese Long) v2cgybcuB033
CsGy1G003760Bottle gourd (USVL1VR-Ls)cgyblsiB021
CsGy1G003760Bottle gourd (USVL1VR-Ls)cgyblsiB049
CsGy1G003760Bottle gourd (USVL1VR-Ls)cgyblsiB068
CsGy1G003760Melon (DHL92) v3.5.1cgybmeB006
CsGy1G003760Melon (DHL92) v3.5.1cgybmeB026
CsGy1G003760Melon (DHL92) v3.5.1cgybmeB050
CsGy1G003760Melon (DHL92) v3.6.1cgybmedB006
CsGy1G003760Melon (DHL92) v3.6.1cgybmedB025
CsGy1G003760Melon (DHL92) v3.6.1cgybmedB044
CsGy1G003760Watermelon (Charleston Gray)cgybwcgB054
CsGy1G003760Watermelon (Charleston Gray)cgybwcgB059
CsGy1G003760Watermelon (Charleston Gray)cgybwcgB079
CsGy1G003760Watermelon (97103) v1cgybwmB038
CsGy1G003760Watermelon (97103) v1cgybwmB065
CsGy1G003760Watermelon (97103) v1cgybwmB095