CsGy1G003400 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G003400
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 2125406 .. 2130681 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGATTTGAACACCTTCACAATCAAGTCGCTTTGTTGGAAATGCGTTCGCGAATACCAAAGCGAAAAGGAGATTGGAGCTTCGAAGTATAAATGTCTGCTGCCAATGAGAGACTCCATGGCGTAAAGGTACAGTGGTCGATGAGCTCTCAGAATGTGATGGATGATAGAAACCAATTGATCCTTCTTAGGCTCTGGATATTGAGAACTCGCACAAAGAGGATGCAAATTCATGGGAGCTCTCTCAACCTTTTCTTATTGCAATTTAATTTCTTGAATCATGATCCTAAAACCTCAAACTATTCACACACATATATACATTGAGTATAAATATTAGATATCTTATGACGTTTGGAGCGAAGAGTGACTTCTTAAGATTATAATAGTCTGAAGATTAGTAGTATGCTTTTGAGGTGTAGACTATTATCACAACTTTTATCGGTTTGCTTACTTTTGTGGTAGCTAGGATTTCCGTTTTGGCTTGGCCTTCTTCGATAAATATTTAGAGTTTAGTGAGAGAGGAGATATGAGAAAGAGAAGTTTAGTATTATCACGATCACCGGCAGATTTAGTATAGACCCGGGCGCTCGAGTCCCTCTCAACTTTATTGTCTCAATTAATATTTAATATTTGTAAACAGTTTAGTGGTAATTATGCTTGTTAACCCCCTTCCAACCAGAGTTCAAGTCTGATCATGATACTAGGATTAGGAAGGGCCAAGCATGAAGTGGGCAGCCTTTCACTCTAATCCTTGCGACAAACACCTAAATAAATATCTCAAAGAAAAGATCTAGAAATATTCTAGGTTTTCTTCGGGTTTAAAGAACTGTGAAATTCAAATAAGAAGAATATAAGAAATATCTATAATATTTGTAGAATCCAAAAAGAACATAGAAAGATCCTTTTATTTGGATTCCAAGGATCTTCCAAATGATTGTCTCATGCTTTTACATTTGCTAACTAGGAGTGGTTAAGGTATATTGGTTTTCACATTGCACAAATATAATTCGAACGTAAAAGAGCCCTCTAAACCTCTAATTCATTTCATATACATCAAGTTTGAGTGTTATATATATGTTACGGATTGATCAAATCAGGCTCTAAAAAAACTCATGACTGGTGCATTCTAGAGAAATGTTCTGCTTGCTGTCTTTGTTCTGAAAACGAAATTCTCAGAAAATGTGCATGAAAGTCAGGGCTTTGAACATCTGGAAACTCCAAGTCACCAAATAACCAAAGCCCAAGATCACTAAGCTTGAAAGTTTACAGGAGAAAACTCAAAGAAAGTCAACTGTTTCACCCTCTCTTTCTATTGGAGATGGGTTTGGATTCCATTGCATCACCATCCAATGTATGTACACCCTCTATTGCCTCATATTCATTCACTGAAAAAATATGCTACATGTACATTTTACAAAAGTTTATAGCATTTTCTTGGGAGGGATAGTACAATGTGACATGTGAGCCTGAATTTTAGTTCAATTCAAGTCAAATTTTAGTGTTACTGAATCTAGTCTCTCTAGACCAATGCAGCAAAAGGTATTGAACATCAGCGGAGTTGTTTTTGCTCCAATGAAGGGCTTTTTTATGTATTCATCTTTGGGAAGCCAATTAAACCCAAAAGTAAAATTGTAAGTAGAGTTGATAGCCTAGTAATTTTGAAATTAGGAGACTTTTGTTATGACAACTTCTGATTATATCAATCACTAGACCCTCCAAAATCAATAGTCACAATTCCAAGGGAGTGTTAGAGGAAATTGCCTTGTAATTGAAGACTAAGAATTTTAAATGTACGATGATGATGAGCCTTAGTCATCAAACACAGAGACTTTCATTTTAGAAACCAAAAATCCAGCAAACAGTTCTTTCCATTTTTTGATAAGAAATAAATTTTGATGATGTATGAAATTTACAAAATTTGTTTCTTATCAACCATACAAAACCCTTAAACCTATTTTGCTTAGCTAGTTAGCTAAAAGACCTTTCCACCCATAACTAAAAAACAATACATACTAAAACAGTAATCCTAATTAAGTCATAAGTCTCATATCAAAGGCTCAAAACATAAACACTTAAAATAAATCATACTTGCAAAACAATTTCAACAGTAAATTTTTCTAGCAGAGCATTTAGCAAAAGTATACATCAGTTAGTTTTCGTTCCTTGAAACTCTGCTGCTGCGTTCATCTTTTGTTTATATGTGAAAATTGAAAGCTAAATTAGCTTCTTAGCTCTTGAACGGTTGATTGGTCTTAGAGGTAAAGTGAGGATATCTTGATTAGATCACAAACTCTCCACAAAGCATAAGTAGGCCCCAAAAACAATCTGTGTTAGACTTAGCTCCTTCTTGTATGTGTGGGACACCCTCATGAAGCTACTACAGTATCAAGGGTAGCCACCTTTAAATCAACAATGTTGTTGAGAATATTTTACTACACATGTCCAACATTGTAAAGTTGATCTCTGAATACAAAATATTTAAAAGAATAATGCATGCAAAAGGACAATATAAAAGCATCTTACAATTTTTTTTATGGTTTAGCCAATCATATATGATTGTTTCACTTTTACATTCATACAGTACTAAAGTTTTATTAATTTATTTTACTATCCCATTAAAAATACCTTCAAAAGTAATTAAACAAGAGCATGTTCTTAGGGAGACTCTTCACTAGCTAGGTGACAAAAATGAGAGAACAGGTGAAGAAAGCAGGTGGGGAGTTTCAAATTTTGAAGTAAAGCAGGTGAAGATGAGCACAAAGTCAGATAACAACATCAGGGTCCTGTCTGTTTTTGGGCTTTTGAGGTGGGAGTTTTGTTTGGAAGCTGTTGGAATTATACTCTCAAGGTATTTATCTGAGTTAACATCAATTAATTTATTATAATCATTCATTTATTCACATATAGTTTGTCAGTCTCTCCTAATTTGCTTTGGAGCTTTCTCCAACTACTTGAACTATATAATATTAATCAACCCCAGCTCATCAACTTGGCAAGTTGTAAGTTTTCTAACTAATTCCCTCTCTCCCTCTCTTTCTTATTTACACATACCATAATCCCTCCTTCTCAACACATCTTTTTTATTTTGATTGATATAAATTCATCCAACCACGTCCTTTTATCTATAAATCTTTCCTCAAACAACTACTTGAACATATTTGGATGGATTTTCTTCGAAAAATACTTTTTAAGCACTTAGAAAATTAGTCTAAGTAAGCCTTCCATTATTGATTATTAATAAATGGTAAGGGTGTGTTTAGATTGACTTTTTTGTTTCCAAGATAACCAAAGTGATCGAAATAGAGGATCATTGTTTTAATACAATCCAACAAAATAGCTGAAGGTTTTAAGGTAACTTTTTCAAGGTTGATATCAATCTGCAAGTACTTAGGTTGTCCTACACTCTTAAGGCTTTCTGCTTGTCCAAATTAGCAAGTACAGAGAGAAGCTAAGGGACCCATATTCCTACACTAGTTTGCCAATTTATATATTATGGTTTTTGAAGGACATCAGTTCTTTAGCTAACAACAATAATCATTTTACCTAATCTCAATAGTAACTTTGATCTCTCCTCTGTCATTTCAAGAACTAGCTTCTGACACCTACATGGTTTTTGTAGCATCTTAGTACTACTCCTTAGGTAAATATAAATGTGTAGAAATGTATTTAAAGGTTCTCCAAGTTTGTTTGAATCTATTTGGAATGACTTCTCAAATGCTTAATCACGTTTTAAAAAAATAATGATCGATTTTTTTTAAAATAAAAAGGGAAATGTTGTCCTACTAAGGGCTTGGACACCACTAAGCTTTTGGTATGTGTTTACTCCATGAAAAGAGATTGTTTCTCTTTTTTTTTTGGTGAGTATAAAATTTCCTATTCTTCAATATTATATAATATATACTTATTATTTCAAGAGAGAGTTTATAAAAACTATTTCAGAAAATAAAATAATAATATTAATTACAAAACAAAGACTTTACTTTGTTATTTTCGTATGCTTTTTTTCTGTATTGCTTCTTAAATCAACTGTTCATACACAATTCATTAGCAAATTTTCTTACCTACCATAGTATTTGAATAAAAGTACAGATAACACAATGAAAATTTATCATTAGTCACCACTTTCTTAGGAATTAATTTCCTACAAGCTTCCTTTGAGACTTAAATGTTGTAAGGTCAAAAGGGTTGTTGCATGAGATTAGTTGTGATAATATGGACACTCATGGTTTTATATATATATATATAACAATAAGAAAAAGGATGAAGATCATTTTAATGATAGAGGGAAATGCACATGATCTGATCCCAACCCAAGGGAAAGAACCTCCCCAATAAGACAATAAACAAGTAATTTAATTTTTAGTTAGAAGCATTCTATAAATTCCTTTGCAGCCTATGATATTCAGTGGATGCTATTTTGCTGACACCTAGCTCCTGCTGCTGCCAACCAAACCTTTTTTCTTTCCATTAATGGCTACCAATTCTTCATCTCTACCTCCAAATCAAGAGATCAACCATGGAAGAAGAAGGTTTCTTGGAGTAAGACAACGCCCTTCAGGAAGATGGGTTGCTGAAATCAAAGTCTCCTCACAGAAACTTAGGCTATGGCTTGGAACTTTCAACAGAGCTGAAGATGCTGCCATGGCTTATGACAGAGCTGCAAGGCTTCTCAGAGGAAGATCTGCAAAGACAAATTTCTCATATGATTATCATCATGGCTTCTTCAATTCCACCATTAATCAAGAACAAACTCCTTCATTGTTTGAACATAGTCCTAAACTCTGTCGTTTGCTTCAACATGCTCTTATGAAAAACAGAAGCCGTTTGATATCAACAACTGATCATCAGTATCATCATCGTCGTCGTCATCAACAACAACAGATATCGAGAAATAATGGGGGTATTGATTCGGTTGTTGAAGATACCATTTTCTGTTCTTCAACGAATTTGGTTGAAAATAATAATAATAGTAGTAATAAAGGGTGTGGATGTGGATTTTCTTTTGGAGGTTCTAAAGTTTATACTTCTGTGTTTGTAGCTCCTTCTTTTAGCTCTGATGTTCAGAAGTGAAGTATGGAAGGAGTGATATATATGATGTTGATGAATTCATTAAGCTTTGATTTAGTGTAGTTTCTTTAGTTGGGAACCTGTTTGTATTTCTAATTCTACGTAGTTTCGTCCATGTAAAATTACAGTTCTCTCTTCCATTGTTGCTACCATTCTGTGTTAGTGGAGAAGCTGAAGAATAAAGAATTGACTTCCTACATGTCATGAGTCTG

mRNA sequence

GGATTTGAACACCTTCACAATCAAGTCGCTTTGTTGGAAATGCGTTCGCGAATACCAAAGCGAAAAGGAGATTGGAGCTTCGAAGTGAAGATGAGCACAAAGTCAGATAACAACATCAGGGTCCTGTCTGTTTTTGGGCTTTTGAGGTGGGAGTTTTGTTTGGAAGCTGTTGGAATTATACTCTCAAGCTCCTGCTGCTGCCAACCAAACCTTTTTTCTTTCCATTAATGGCTACCAATTCTTCATCTCTACCTCCAAATCAAGAGATCAACCATGGAAGAAGAAGGTTTCTTGGAGTAAGACAACGCCCTTCAGGAAGATGGGTTGCTGAAATCAAAGTCTCCTCACAGAAACTTAGGCTATGGCTTGGAACTTTCAACAGAGCTGAAGATGCTGCCATGGCTTATGACAGAGCTGCAAGGCTTCTCAGAGGAAGATCTGCAAAGACAAATTTCTCATATGATTATCATCATGGCTTCTTCAATTCCACCATTAATCAAGAACAAACTCCTTCATTGTTTGAACATAGTCCTAAACTCTGTCGTTTGCTTCAACATGCTCTTATGAAAAACAGAAGCCGTTTGATATCAACAACTGATCATCAGTATCATCATCGTCGTCGTCATCAACAACAACAGATATCGAGAAATAATGGGGGTATTGATTCGGTTGTTGAAGATACCATTTTCTGTTCTTCAACGAATTTGGTTGAAAATAATAATAATAGTAGTAATAAAGGGTGTGGATGTGGATTTTCTTTTGGAGGTTCTAAAGTTTATACTTCTGTGTTTGTAGCTCCTTCTTTTAGCTCTGATGTTCAGAAGTGAAGTATGGAAGGAGTGATATATATGATGTTGATGAATTCATTAAGCTTTGATTTAGTGTAGTTTCTTTAGTTGGGAACCTGTTTGTATTTCTAATTCTACGTAGTTTCGTCCATGTAAAATTACAGTTCTCTCTTCCATTGTTGCTACCATTCTGTGTTAGTGGAGAAGCTGAAGAATAAAGAATTGACTTCCTACATGTCATGAGTCTG

Coding sequence (CDS)

GGATTTGAACACCTTCACAATCAAGTCGCTTTGTTGGAAATGCGTTCGCGAATACCAAAGCGAAAAGGAGATTGGAGCTTCGAAGTGAAGATGAGCACAAAGTCAGATAACAACATCAGGGTCCTGTCTGTTTTTGGGCTTTTGAGGTGGGAGTTTTGTTTGGAAGCTGTTGGAATTATACTCTCAAGCTCCTGCTGCTGCCAACCAAACCTTTTTTCTTTCCATTAA

Protein sequence

GFEHLHNQVALLEMRSRIPKRKGDWSFEVKMSTKSDNNIRVLSVFGLLRWEFCLEAVGIILSSSCCCQPNLFSFH
Homology
[Close]
BLAST of CsGy1G003400 vs. NCBI nr
Match: XP_008453342.1 (PREDICTED: uncharacterized protein LOC103494092 isoform X2 [Cucumis melo])

HSP 1 Score: 69.3 bits (168), Expect = 6.2e-09
Identity = 34/40 (85.00%), Postives = 35/40 (87.50%), Query Frame = 0 

Query: 28 EVKMSTKSDNNIRVLSVFGLLRWEFCLEAVGIILSSSCCC 68
          +VKMSTKSDNN RVLSVFGLLRWEFCLEAVGII SS   C
Sbjct: 54 QVKMSTKSDNNTRVLSVFGLLRWEFCLEAVGIIPSSLLIC 93

[Close]
BLAST of CsGy1G003400 vs. TrEMBL
Match: tr|A0A1S3BW03|A0A1S3BW03_CUCME (uncharacterized protein LOC103494092 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494092 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.1e-09
Identity = 34/40 (85.00%), Postives = 35/40 (87.50%), Query Frame = 0 

Query: 28 EVKMSTKSDNNIRVLSVFGLLRWEFCLEAVGIILSSSCCC 68
          +VKMSTKSDNN RVLSVFGLLRWEFCLEAVGII SS   C
Sbjct: 54 QVKMSTKSDNNTRVLSVFGLLRWEFCLEAVGIIPSSLLIC 93

The following BLAST results are available for this feature:
BLAST of CsGy1G003400 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008453342.16.2e-0985.00PREDICTED: uncharacterized protein LOC103494092 isoform X2 [Cucumis melo][more]
BLAST of CsGy1G003400 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G003400 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G003400 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BW03|A0A1S3BW03_CUCME4.1e-0985.00uncharacterized protein LOC103494092 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G003400.1CsGy1G003400.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G003400Cucumber (Gy14) v2cgybcgybB002
CsGy1G003400Cucurbita maxima (Rimu)cgybcmaB018
CsGy1G003400Cucurbita maxima (Rimu)cgybcmaB029
CsGy1G003400Cucurbita maxima (Rimu)cgybcmaB051
CsGy1G003400Cucurbita maxima (Rimu)cgybcmaB077
CsGy1G003400Cucurbita maxima (Rimu)cgybcmaB088
CsGy1G003400Cucurbita moschata (Rifu)cgybcmoB017
CsGy1G003400Cucurbita moschata (Rifu)cgybcmoB028
CsGy1G003400Cucurbita moschata (Rifu)cgybcmoB045
CsGy1G003400Cucurbita moschata (Rifu)cgybcmoB088
CsGy1G003400Cucurbita pepo (Zucchini)cgybcpeB020
CsGy1G003400Cucurbita pepo (Zucchini)cgybcpeB041
CsGy1G003400Cucurbita pepo (Zucchini)cgybcpeB063
CsGy1G003400Cucurbita pepo (Zucchini)cgybcpeB073
CsGy1G003400Cucurbita pepo (Zucchini)cgybcpeB096
CsGy1G003400Cucurbita pepo (Zucchini)cgybcpeB116
CsGy1G003400Cucumber (Chinese Long) v2cgybcuB001
CsGy1G003400Cucumber (Chinese Long) v2cgybcuB004
CsGy1G003400Bottle gourd (USVL1VR-Ls)cgyblsiB021
CsGy1G003400Bottle gourd (USVL1VR-Ls)cgyblsiB068
CsGy1G003400Melon (DHL92) v3.5.1cgybmeB006
CsGy1G003400Melon (DHL92) v3.5.1cgybmeB050
CsGy1G003400Melon (DHL92) v3.6.1cgybmedB044
CsGy1G003400Watermelon (Charleston Gray)cgybwcgB054
CsGy1G003400Watermelon (Charleston Gray)cgybwcgB079
CsGy1G003400Watermelon (97103) v1cgybwmB065
CsGy1G003400Watermelon (97103) v1cgybwmB095
CsGy1G003400Wild cucumber (PI 183967)cgybcpiB001
CsGy1G003400Wild cucumber (PI 183967)cgybcpiB003
CsGy1G003400Silver-seed gourdcarcgybB0394
CsGy1G003400Silver-seed gourdcarcgybB0468
CsGy1G003400Silver-seed gourdcarcgybB0519
CsGy1G003400Silver-seed gourdcarcgybB0593
CsGy1G003400Silver-seed gourdcarcgybB0594
CsGy1G003400Cucumber (Chinese Long) v3cgybcucB002
CsGy1G003400Cucumber (Chinese Long) v3cgybcucB004
CsGy1G003400Watermelon (97103) v2cgybwmbB054
CsGy1G003400Watermelon (97103) v2cgybwmbB077
CsGy1G003400Wax gourdcgybwgoB109