CsGy1G002920 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATCTGGGCAAAAGATCGAGGCCATTGAATCAAAAACACATTCTATCAGCAGTACAAGCGGAGTTGATCATTCTATTTCGAGCAATAAATTAGCCTCTTCTTTATCCTCAGCATCTGATTCATCCTCTGACAGCTCCTTTGAATTGATTGTAACTGGGCTCGACGGTTCCATTGGTGTTGCAAGTGATTCTTTAAAAAAGGACGAGTTGCACGTTGTAGGACGCTCGGACTCTGGATTCGTGTTTATTACTAGTGATGATGTTGGAACTCATTCTCCAAAGACTGATCTTCCTGGGACAGCCAAGATACCAAGTCAGTCGTTGTCACGGTCGTCATCGTCCTCATCTGAATCTTCCCTGCACGATCATGTGATTGAACTCCCAAAGCCTGTGGAGCCAGATTCGAAAAAAAGACTACCAGGTCTTAAACATGGTGAAACCAATAATGTTGAAAGTAGGAAAAGTATACAAACTTGTTCTTCCACCTCGTCTTCCTCGTCATCCGAATCTGAATCTAAACATAAACTTCAAAAGGGTAGAGATGTTGATAATTTATTGTCGAAAAATCCTAGCTCTCCAAGCGTGGTAAAGGACAACAGGTTGGTTACAGATTTCAGTGATGATGATGTTCCCACCAGCAATGGACAATCAGCAGTAACTCCTACCCATAGGGTAGACTCAAGCTCGGGTTGCGAGACACCTACTCAATATCCTCAAACTCAAATGATGGATAGAGTTGAGGATCCTACTTCTCCTGCATATAGAATTCCATCTCGTGTCTTTTCAAGAACTAAATCTACAGCGCCTATGGAATGGAGTGTTGCTTCAAATGAATCATTGTTCAGCATTCAGATGGGGAACATGAGTTTTACTAGAGAACAGTTGTGTTGGCTAGGAAAATCAGGCGAGCTATGTAGGCCTGGTGAATCCACAATCGACATGTCCCAACATTTGGCTATGAAAACTTCTGATTGTGGATTGAAGAGCAAAAGTCCAAATGGTGATCTATCAGCAACTGAGGCACGAGCTGCAGAAACAATGAGGGAGGTTATACGAGAAAACTCAGAGAACCAACGAAAGGAGAGTTCAACACTAACGGAGTCGTCGTCTCAATCGGCCAGCATCTCTCATCAGTCAGAAGGAAGCACAAAATCTTTCCAGTTTCCAATGTAAGCCACCTAAATTCTCAAATCTTTATCAACTAAAACGACAACTAATCTCCAAAACTAATTGGTTTAGTTAACTCACGAAATCTTAGAATATAATGTCACCTTTAACGCATTTAGTTCAACAAACATATGAATGTTTTGCGGTGGAAATTGAAGATTGACAGGAGAAGGAGGAAAAAGCATTTCATTGAAGGGAGGCGACCTGGAGAAGGCGAAACAAGAAGGGAAACCAGAATCACCAGAAACACCTTCAAATCCACAAACCCCAAAAGAGAAAAATTCAGACGAATCGCCAAAAGCAACTACAAACACGGGGCAAAAGAGATGGTTTTCTTGCTTTTCTTGCTGCCCGTTCTGTAGTTAAGAAGTGTACAGGTTCATCAACGATGCCCCTCATTTCTTATGCTAACTAGGATAATCCCAACAGGATAGTTTGCACAGTTTAATTAGTTCTGTTAACAACACGAGTTTTGTTTTATTAGGCACAGTTTCTTTTTTCTCAGTTCATGGTAACTGGCTAAACGATCTTTGGACTCTGAATCGATCTTATACGCATATTGTTTTGTGTGATATTGACAAATTTTTGGTGAAGAAATCACTGATCTGATGAGATTAAAAAGACAGAAAAAAATAAAATGGTTCAAAG ATGGAATCTGGGCAAAAGATCGAGGCCATTGAATCAAAAACACATTCTATCAGCAGTACAAGCGGAGTTGATCATTCTATTTCGAGCAATAAATTAGCCTCTTCTTTATCCTCAGCATCTGATTCATCCTCTGACAGCTCCTTTGAATTGATTGTAACTGGGCTCGACGGTTCCATTGGTGTTGCAAGTGATTCTTTAAAAAAGGACGAGTTGCACGTTGTAGGACGCTCGGACTCTGGATTCGTGTTTATTACTAGTGATGATGTTGGAACTCATTCTCCAAAGACTGATCTTCCTGGGACAGCCAAGATACCAAGTCAGTCGTTGTCACGGTCGTCATCGTCCTCATCTGAATCTTCCCTGCACGATCATGTGATTGAACTCCCAAAGCCTGTGGAGCCAGATTCGAAAAAAAGACTACCAGGTCTTAAACATGGTGAAACCAATAATGTTGAAAGTAGGAAAAGTATACAAACTTGTTCTTCCACCTCGTCTTCCTCGTCATCCGAATCTGAATCTAAACATAAACTTCAAAAGGGTAGAGATGTTGATAATTTATTGTCGAAAAATCCTAGCTCTCCAAGCGTGGTAAAGGACAACAGGTTGGTTACAGATTTCAGTGATGATGATGTTCCCACCAGCAATGGACAATCAGCAGTAACTCCTACCCATAGGGTAGACTCAAGCTCGGGTTGCGAGACACCTACTCAATATCCTCAAACTCAAATGATGGATAGAGTTGAGGATCCTACTTCTCCTGCATATAGAATTCCATCTCGTGTCTTTTCAAGAACTAAATCTACAGCGCCTATGGAATGGAGTGTTGCTTCAAATGAATCATTGTTCAGCATTCAGATGGGGAACATGAGTTTTACTAGAGAACAGTTGTGTTGGCTAGGAAAATCAGGCGAGCTATGTAGGCCTGGTGAATCCACAATCGACATGTCCCAACATTTGGCTATGAAAACTTCTGATTGTGGATTGAAGAGCAAAAGTCCAAATGGTGATCTATCAGCAACTGAGGCACGAGCTGCAGAAACAATGAGGGAGGTTATACGAGAAAACTCAGAGAACCAACGAAAGGAGAGTTCAACACTAACGGAGTCGTCGTCTCAATCGGCCAGCATCTCTCATCAGTCAGAAGGAAGCACAAAATCTTTCCAGTTTCCAATATTGACAGGAGAAGGAGGAAAAAGCATTTCATTGAAGGGAGGCGACCTGGAGAAGGCGAAACAAGAAGGGAAACCAGAATCACCAGAAACACCTTCAAATCCACAAACCCCAAAAGAGAAAAATTCAGACGAATCGCCAAAAGCAACTACAAACACGGGGCAAAAGAGATGGTTTTCTTGCTTTTCTTGCTGCCCGTTCTGTAGTTAAGAAGTGTACAGGTTCATCAACGATGCCCCTCATTTCTTATGCTAACTAGGATAATCCCAACAGGATAGTTTGCACAGTTTAATTAGTTCTGTTAACAACACGAGTTTTGTTTTATTAGGCACAGTTTCTTTTTTCTCAGTTCATGGTAACTGGCTAAACGATCTTTGGACTCTGAATCGATCTTATACGCATATTGTTTTGTGTGATATTGACAAATTTTTGGTGAAGAAATCACTGATCTGATGAGATTAAAAAGACAGAAAAAAATAAAATGGTTCAAAG ATGGAATCTGGGCAAAAGATCGAGGCCATTGAATCAAAAACACATTCTATCAGCAGTACAAGCGGAGTTGATCATTCTATTTCGAGCAATAAATTAGCCTCTTCTTTATCCTCAGCATCTGATTCATCCTCTGACAGCTCCTTTGAATTGATTGTAACTGGGCTCGACGGTTCCATTGGTGTTGCAAGTGATTCTTTAAAAAAGGACGAGTTGCACGTTGTAGGACGCTCGGACTCTGGATTCGTGTTTATTACTAGTGATGATGTTGGAACTCATTCTCCAAAGACTGATCTTCCTGGGACAGCCAAGATACCAAGTCAGTCGTTGTCACGGTCGTCATCGTCCTCATCTGAATCTTCCCTGCACGATCATGTGATTGAACTCCCAAAGCCTGTGGAGCCAGATTCGAAAAAAAGACTACCAGGTCTTAAACATGGTGAAACCAATAATGTTGAAAGTAGGAAAAGTATACAAACTTGTTCTTCCACCTCGTCTTCCTCGTCATCCGAATCTGAATCTAAACATAAACTTCAAAAGGGTAGAGATGTTGATAATTTATTGTCGAAAAATCCTAGCTCTCCAAGCGTGGTAAAGGACAACAGGTTGGTTACAGATTTCAGTGATGATGATGTTCCCACCAGCAATGGACAATCAGCAGTAACTCCTACCCATAGGGTAGACTCAAGCTCGGGTTGCGAGACACCTACTCAATATCCTCAAACTCAAATGATGGATAGAGTTGAGGATCCTACTTCTCCTGCATATAGAATTCCATCTCGTGTCTTTTCAAGAACTAAATCTACAGCGCCTATGGAATGGAGTGTTGCTTCAAATGAATCATTGTTCAGCATTCAGATGGGGAACATGAGTTTTACTAGAGAACAGTTGTGTTGGCTAGGAAAATCAGGCGAGCTATGTAGGCCTGGTGAATCCACAATCGACATGTCCCAACATTTGGCTATGAAAACTTCTGATTGTGGATTGAAGAGCAAAAGTCCAAATGGTGATCTATCAGCAACTGAGGCACGAGCTGCAGAAACAATGAGGGAGGTTATACGAGAAAACTCAGAGAACCAACGAAAGGAGAGTTCAACACTAACGGAGTCGTCGTCTCAATCGGCCAGCATCTCTCATCAGTCAGAAGGAAGCACAAAATCTTTCCAGTTTCCAATATTGACAGGAGAAGGAGGAAAAAGCATTTCATTGAAGGGAGGCGACCTGGAGAAGGCGAAACAAGAAGGGAAACCAGAATCACCAGAAACACCTTCAAATCCACAAACCCCAAAAGAGAAAAATTCAGACGAATCGCCAAAAGCAACTACAAACACGGGGCAAAAGAGATGGTTTTCTTGCTTTTCTTGCTGCCCGTTCTGTAGTTAA MESGQKIEAIESKTHSISSTSGVDHSISSNKLASSLSSASDSSSDSSFELIVTGLDGSIGVASDSLKKDELHVVGRSDSGFVFITSDDVGTHSPKTDLPGTAKIPSQSLSRSSSSSSESSLHDHVIELPKPVEPDSKKRLPGLKHGETNNVESRKSIQTCSSTSSSSSSESESKHKLQKGRDVDNLLSKNPSSPSVVKDNRLVTDFSDDDVPTSNGQSAVTPTHRVDSSSGCETPTQYPQTQMMDRVEDPTSPAYRIPSRVFSRTKSTAPMEWSVASNESLFSIQMGNMSFTREQLCWLGKSGELCRPGESTIDMSQHLAMKTSDCGLKSKSPNGDLSATEARAAETMREVIRENSENQRKESSTLTESSSQSASISHQSEGSTKSFQFPILTGEGGKSISLKGGDLEKAKQEGKPESPETPSNPQTPKEKNSDESPKATTNTGQKRWFSCFSCCPFCS
BLAST of CsGy1G002920 vs. NCBI nr
Match: XP_011648451.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 1 [Cucumis sativus] >XP_011648455.1 PREDICTED: mediator of RNA polymerase II transcription subunit 1 [Cucumis sativus] >KGN63731.1 hypothetical protein Csa_1G013790 [Cucumis sativus]) HSP 1 Score: 728.4 bits (1879), Expect = 1.5e-206 Identity = 459/459 (100.00%), Postives = 459/459 (100.00%), Query Frame = 0
BLAST of CsGy1G002920 vs. NCBI nr
Match: XP_008453279.1 (PREDICTED: uncharacterized protein LOC103494046 [Cucumis melo]) HSP 1 Score: 619.8 bits (1597), Expect = 7.6e-174 Identity = 375/424 (88.44%), Postives = 381/424 (89.86%), Query Frame = 0
BLAST of CsGy1G002920 vs. NCBI nr
Match: XP_022135351.1 (uncharacterized protein LOC111007326 isoform X2 [Momordica charantia]) HSP 1 Score: 399.1 bits (1024), Expect = 2.1e-107 Identity = 271/472 (57.42%), Postives = 297/472 (62.92%), Query Frame = 0
BLAST of CsGy1G002920 vs. NCBI nr
Match: XP_022135339.1 (suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135340.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135341.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135342.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135343.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135344.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135345.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135346.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135347.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135349.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135350.1 suppressor protein SRP40 isoform X1 [Momordica charantia]) HSP 1 Score: 374.8 bits (961), Expect = 4.2e-100 Identity = 274/470 (58.30%), Postives = 300/470 (63.83%), Query Frame = 0
BLAST of CsGy1G002920 vs. NCBI nr
Match: XP_023516806.1 (uncharacterized protein LOC111780597 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 370.5 bits (950), Expect = 8.0e-99 Identity = 271/466 (58.15%), Postives = 309/466 (66.31%), Query Frame = 0
BLAST of CsGy1G002920 vs. TAIR10
Match: AT1G74220.1 (unknown protein) HSP 1 Score: 63.2 bits (152), Expect = 5.0e-10 Identity = 67/185 (36.22%), Postives = 93/185 (50.27%), Query Frame = 0
BLAST of CsGy1G002920 vs. TAIR10
Match: AT2G03630.1 (unknown protein) HSP 1 Score: 60.1 bits (144), Expect = 4.2e-09 Identity = 31/54 (57.41%), Postives = 35/54 (64.81%), Query Frame = 0
BLAST of CsGy1G002920 vs. TrEMBL
Match: tr|A0A0A0LUN5|A0A0A0LUN5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G013790 PE=4 SV=1) HSP 1 Score: 728.4 bits (1879), Expect = 1.0e-206 Identity = 459/459 (100.00%), Postives = 459/459 (100.00%), Query Frame = 0
BLAST of CsGy1G002920 vs. TrEMBL
Match: tr|A0A1S3BVA3|A0A1S3BVA3_CUCME (uncharacterized protein LOC103494046 OS=Cucumis melo OX=3656 GN=LOC103494046 PE=4 SV=1) HSP 1 Score: 619.8 bits (1597), Expect = 5.0e-174 Identity = 375/424 (88.44%), Postives = 381/424 (89.86%), Query Frame = 0
BLAST of CsGy1G002920 vs. TrEMBL
Match: tr|A0A2I4EZK5|A0A2I4EZK5_9ROSI (uncharacterized serine-rich protein C215.13-like OS=Juglans regia OX=51240 GN=LOC108994162 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 2.2e-36 Identity = 116/288 (40.28%), Postives = 157/288 (54.51%), Query Frame = 0
BLAST of CsGy1G002920 vs. TrEMBL
Match: tr|A0A251PBC7|A0A251PBC7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G205600 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 1.4e-35 Identity = 109/258 (42.25%), Postives = 147/258 (56.98%), Query Frame = 0
BLAST of CsGy1G002920 vs. TrEMBL
Match: tr|M5WFW2|M5WFW2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa021832mg PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 3.2e-35 Identity = 113/245 (46.12%), Postives = 136/245 (55.51%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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