CsGy1G002460 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G002460
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Description60S ribosomal protein L34
LocationChr1 : 1511292 .. 1513401 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCAGCGTCTTACATACCGCAAGCGCCATAGCTATGCTACCAAGTCTAACCAGCACCGTGTTGTCAAAACCCCGGGTAAACTCTCGGATTCCTTCTCACAGCTGTTATATCAAGCGTTTTTTTAACTTCATTGTCAATCAATCGGTTTTCGTATTTATTGATTCTGTTCTTATGAGCTTTTTCTATTTTGTGTTTAGGTGGGAAGCTTGTGTATCAGACTACCAAGAAAAGAGCTAGTGGACCCAAATGTCCGGTTACCGGCAAAAGGATTCAGGGGGTATGTATTTGATTACTCTTATCTGCTTCTTTTATCACTTAATCTTATTTATGTTTTGATTTGTTTATGATGGTTATGTTATCTCTTTGTAGTTTAGATCTTTGCCGTAAATTTCCTTTGAAACTTGTTTGTTGATAAGGAAAGATGAAATAAAAAATGATGCAGAAAATTTGTTCTAGTTGCCGCATTTGTGTTGCATTAGAGAAAAAATTTGTCTCCACTTACTGAAATTTTGGATTTTGGTTCTCTGTGATCGCTACACACCACCTGTTACTGATTTTTTTTTCCGAGTTCATTTATAGTTTTTGTTTCCCTTTGTAATAAAATGGCTATGGCGAAATGGTTTCTGATTAAGTTGTTATTAGCGGATTCTAAAGGAATCTCGATTAGCTGCTGTTCCACTAGCCTCCTGAGTAATCGATATACTATCATCGAGCTTAATGAATAACAGACTTCACAGGCTACAGTGATCTTATAATCACAATATACTGCTCTATACCTTTGTTTGAATATCATATTTTACCCAGAAGGGTCAATCTGTACTACTTCTACTTAATGGTCGGAAGGATTCTTCATTGGCTTAAACTTGATTCAGATTTATTTTTCTGAAAAAAAATTCATTCAAGAACCCATAGAACCGTATATTAAGTTGATTCAGAAAGTACAAATCTTCACTCTTTTAAACTGCACCCTAATGACACTCCTGCAAAATATGCCTTCATTTTATATGTTAAGATAAGATTGCTGCATTGTCTTAGGTCTTTCCTCCAAAAGTTGTGAATAATTATTCGGTTATCAATCTTGCATATACGTATATATTCACACTTTTGCACCACACCAACTTATGTATCTATACTAAATTCATTCATTGTAGATTGGTTGATGCATGCATGTAAATTTTTGCATCATTACATTCATTGTTTATATGGTGGTAGACACGCTTGCATTTACATTTGGTACTTTGGTTGATTTTTGAACTATATGATAGATAGCCTTGTAAATTTATGTATGGTTTTTAGAAATTGGGTATGTTATATTTTGTTCATTTGTAACGATGGCTCAATCCGATTATGTTAAGTTAATCTGTGTAAGTTTATGATTGTTGCAGATTCCTCACTTGAGGCCAGCTGAATATAAGAGGTCTAGACTGGCTAGGAACCGTAGGACCGTGAATCGTGCATACGGTGGTGTTTTATCTGGTGGTGCTGTGAGGGAGAGGTTGGCTTCCCATTATTTCTCATCATCTGTTTGCTTGTGTTTATGATAGTAAGGTATTGTGCTAATCTTTATTTGGTTTGGGATAGGATCATCCGGGCCTTTTTGGTGGAAGAGCAGAAGATTGTCAAGAAGGTATTGAAGATTCAGAAGGCTAAGGAAAAGCTGGCATCAAAGAGCTAAATTAATTATGTTTAAATTTTGACTTTTTTGTGGCGTGATGCTGAATTCTAGCAATTACTACTTAAAGTTTGTTTGTGGAAGAACGAAATTTTAGGCCAGGAGTTCACTTCTATGATATGATGGCATTTCTTCAACCAATTTTTTTTAGTGCGTTTGATTAATTGTCTCCTTTCCAGCATCTTCTGTTTCCTCAAATTAGAACGTGTTCCACATAGGGTGTTCATCGGCCATAAATCTTTAGCGAAACACCAATAGTTTTCTCTTAAATTCGATTTGGTTATTGGAAATCTGATTTATTACGGTGTTGACAGTTTATCGGTGATCGAAGTAAAAGACAACGAAGAAGACCTCTTGGTCGAAGTAGGTGGTTAGTGTGGTGAGGAATGACCCTATAAGCTCTGAATTAAATATTGAATTAAGCAAGTCGATTG

mRNA sequence

ATGGTTCAGCGTCTTACATACCGCAAGCGCCATAGCTATGCTACCAAGTCTAACCAGCACCGTGTTGTCAAAACCCCGGGTGGGAAGCTTGTGTATCAGACTACCAAGAAAAGAGCTAGTGGACCCAAATGTCCGGTTACCGGCAAAAGGATTCAGGGGATTCCTCACTTGAGGCCAGCTGAATATAAGAGGTCTAGACTGGCTAGGAACCGTAGGACCGTGAATCGTGCATACGGTGGTGTTTTATCTGGTGGTGCTGTGAGGGAGAGGATCATCCGGGCCTTTTTGGTGGAAGAGCAGAAGATTGTCAAGAAGGTATTGAAGATTCAGAAGGCTAAGGAAAAGCTGGCATCAAAGAGCTAAATTAATTATGTTTAAATTTTGACTTTTTTGTGGCGTGATGCTGAATTCTAGCAATTACTACTTAAAGTTTGTTTGTGGAAGAACGAAATTTTAGGCCAGGAGTTCACTTCTATGATATGATGGCATTTCTTCAACCAATTTTTTTTAGTGCGTTTGATTAATTGTCTCCTTTCCAGCATCTTCTGTTTCCTCAAATTAGAACGTGTTCCACATAGGGTGTTCATCGGCCATAAATCTTTAGCGAAACACCAATAGTTTTCTCTTAAATTCGATTTGGTTATTGGAAATCTGATTTATTACGGTGTTGACAGTTTATCGGTGATCGAAGTAAAAGACAACGAAGAAGACCTCTTGGTCGAAGTAGGTGGTTAGTGTGGTGAGGAATGACCCTATAAGCTCTGAATTAAATATTGAATTAAGCAAGTCGATTG

Coding sequence (CDS)

ATGGTTCAGCGTCTTACATACCGCAAGCGCCATAGCTATGCTACCAAGTCTAACCAGCACCGTGTTGTCAAAACCCCGGGTGGGAAGCTTGTGTATCAGACTACCAAGAAAAGAGCTAGTGGACCCAAATGTCCGGTTACCGGCAAAAGGATTCAGGGGATTCCTCACTTGAGGCCAGCTGAATATAAGAGGTCTAGACTGGCTAGGAACCGTAGGACCGTGAATCGTGCATACGGTGGTGTTTTATCTGGTGGTGCTGTGAGGGAGAGGATCATCCGGGCCTTTTTGGTGGAAGAGCAGAAGATTGTCAAGAAGGTATTGAAGATTCAGAAGGCTAAGGAAAAGCTGGCATCAAAGAGCTAA

Protein sequence

MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Homology
[Close]
BLAST of CsGy1G002460 vs. NCBI nr
Match: XP_022152880.1 (60S ribosomal protein L34 [Momordica charantia] >XP_022933946.1 60S ribosomal protein L34-like [Cucurbita moschata] >XP_022933947.1 60S ribosomal protein L34-like [Cucurbita moschata] >XP_022964734.1 60S ribosomal protein L34-like [Cucurbita moschata] >XP_022964735.1 60S ribosomal protein L34-like [Cucurbita moschata] >XP_022922091.1 60S ribosomal protein L34-like [Cucurbita moschata] >XP_022973066.1 60S ribosomal protein L34-like [Cucurbita maxima] >XP_022973072.1 60S ribosomal protein L34-like [Cucurbita maxima] >XP_022969674.1 60S ribosomal protein L34-like [Cucurbita maxima] >XP_022970352.1 60S ribosomal protein L34-like [Cucurbita maxima] >XP_023520847.1 60S ribosomal protein L34-like [Cucurbita pepo subsp. pepo] >XP_023529309.1 60S ribosomal protein L34-like [Cucurbita pepo subsp. pepo] >XP_023529311.1 60S ribosomal protein L34-like [Cucurbita pepo subsp. pepo] >XP_023515397.1 60S ribosomal protein L34-like [Cucurbita pepo subsp. pepo] >XP_023519212.1 60S ribosomal protein L34-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228.0 bits (580), Expect = 1.7e-56
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of CsGy1G002460 vs. NCBI nr
Match: XP_010044743.1 (PREDICTED: 60S ribosomal protein L34 [Eucalyptus grandis] >KCW86845.1 hypothetical protein EUGRSUZ_B03442 [Eucalyptus grandis])

HSP 1 Score: 226.9 bits (577), Expect = 3.7e-56
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of CsGy1G002460 vs. NCBI nr
Match: XP_022938256.1 (60S ribosomal protein L34-like [Cucurbita moschata])

HSP 1 Score: 226.9 bits (577), Expect = 3.7e-56
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKE+LASKS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS 120

[Close]
BLAST of CsGy1G002460 vs. NCBI nr
Match: XP_022987206.1 (60S ribosomal protein L34-like [Cucurbita maxima])

HSP 1 Score: 226.9 bits (577), Expect = 3.7e-56
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYAT+SNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATRSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of CsGy1G002460 vs. NCBI nr
Match: PON67321.1 (Ribosomal protein [Trema orientalis])

HSP 1 Score: 226.5 bits (576), Expect = 4.9e-56
Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of CsGy1G002460 vs. TAIR10
Match: AT1G26880.1 (Ribosomal protein L34e superfamily protein)

HSP 1 Score: 214.2 bits (544), Expect = 4.5e-56
Identity = 110/120 (91.67%), Postives = 116/120 (96.67%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPKA 120

[Close]
BLAST of CsGy1G002460 vs. TAIR10
Match: AT1G69620.1 (ribosomal protein L34)

HSP 1 Score: 211.8 bits (538), Expect = 2.3e-55
Identity = 109/119 (91.60%), Postives = 113/119 (94.96%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASK 120
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPK 119

[Close]
BLAST of CsGy1G002460 vs. TAIR10
Match: AT3G28900.1 (Ribosomal protein L34e superfamily protein)

HSP 1 Score: 209.9 bits (533), Expect = 8.6e-55
Identity = 109/120 (90.83%), Postives = 112/120 (93.33%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQKIVKKVLK+QKAKEK A KS
Sbjct: 61  EYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAFLVEEQKIVKKVLKLQKAKEKTAPKS 120

[Close]
BLAST of CsGy1G002460 vs. Swiss-Prot
Match: sp|P41098|RL34_TOBAC (60S ribosomal protein L34 OS=Nicotiana tabacum OX=4097 GN=RPL34 PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.5e-56
Identity = 114/120 (95.00%), Postives = 118/120 (98.33%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA+KS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120

[Close]
BLAST of CsGy1G002460 vs. Swiss-Prot
Match: sp|P40590|RL34_PEA (60S ribosomal protein L34 OS=Pisum sativum OX=3888 GN=RPL34 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 5.7e-56
Identity = 113/120 (94.17%), Postives = 117/120 (97.50%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYR+RHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQK KEK A+K+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQAAKN 120

[Close]
BLAST of CsGy1G002460 vs. Swiss-Prot
Match: sp|Q42351|RL341_ARATH (60S ribosomal protein L34-1 OS=Arabidopsis thaliana OX=3702 GN=RPL34A PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 8.2e-55
Identity = 110/120 (91.67%), Postives = 116/120 (96.67%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPKA 120

[Close]
BLAST of CsGy1G002460 vs. Swiss-Prot
Match: sp|Q9FE65|RL342_ARATH (60S ribosomal protein L34-2 OS=Arabidopsis thaliana OX=3702 GN=RPL34B PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 4.1e-54
Identity = 109/119 (91.60%), Postives = 113/119 (94.96%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASK 120
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPK 119

[Close]
BLAST of CsGy1G002460 vs. Swiss-Prot
Match: sp|Q9LJW6|RL343_ARATH (60S ribosomal protein L34-3 OS=Arabidopsis thaliana OX=3702 GN=RPL34C PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.5e-53
Identity = 109/120 (90.83%), Postives = 112/120 (93.33%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQKIVKKVLK+QKAKEK A KS
Sbjct: 61  EYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAFLVEEQKIVKKVLKLQKAKEKTAPKS 120

[Close]
BLAST of CsGy1G002460 vs. TrEMBL
Match: tr|A0A059D9F6|A0A059D9F6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03442 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.5e-56
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of CsGy1G002460 vs. TrEMBL
Match: tr|A0A2P5D1Z7|A0A2P5D1Z7_9ROSA (Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_264940 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 3.2e-56
Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of CsGy1G002460 vs. TrEMBL
Match: tr|A0A1S3BV34|A0A1S3BV34_CUCME (60S ribosomal protein L34 OS=Cucumis melo OX=3656 GN=LOC103493989 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 5.5e-56
Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of CsGy1G002460 vs. TrEMBL
Match: tr|A0A059D8U9|A0A059D8U9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03433 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 5.5e-56
Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASK+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKN 120

[Close]
BLAST of CsGy1G002460 vs. TrEMBL
Match: tr|A0A0A0LK03|A0A0A0LK03_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G338890 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 5.5e-56
Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

The following BLAST results are available for this feature:
BLAST of CsGy1G002460 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022152880.11.7e-56100.0060S ribosomal protein L34 [Momordica charantia] >XP_022933946.1 60S ribosomal pr... [more]
XP_010044743.13.7e-5699.17PREDICTED: 60S ribosomal protein L34 [Eucalyptus grandis] >KCW86845.1 hypothetic... [more]
XP_022938256.13.7e-5699.1760S ribosomal protein L34-like [Cucurbita moschata][more]
XP_022987206.13.7e-5699.1760S ribosomal protein L34-like [Cucurbita maxima][more]
PON67321.14.9e-5698.33Ribosomal protein [Trema orientalis][more]
BLAST of CsGy1G002460 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G26880.14.5e-5691.67Ribosomal protein L34e superfamily protein[more]
AT1G69620.12.3e-5591.60ribosomal protein L34[more]
AT3G28900.18.6e-5590.83Ribosomal protein L34e superfamily protein[more]
BLAST of CsGy1G002460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P41098|RL34_TOBAC1.5e-5695.0060S ribosomal protein L34 OS=Nicotiana tabacum OX=4097 GN=RPL34 PE=2 SV=1[more]
sp|P40590|RL34_PEA5.7e-5694.1760S ribosomal protein L34 OS=Pisum sativum OX=3888 GN=RPL34 PE=2 SV=1[more]
sp|Q42351|RL341_ARATH8.2e-5591.6760S ribosomal protein L34-1 OS=Arabidopsis thaliana OX=3702 GN=RPL34A PE=2 SV=1[more]
sp|Q9FE65|RL342_ARATH4.1e-5491.6060S ribosomal protein L34-2 OS=Arabidopsis thaliana OX=3702 GN=RPL34B PE=3 SV=1[more]
sp|Q9LJW6|RL343_ARATH1.5e-5390.8360S ribosomal protein L34-3 OS=Arabidopsis thaliana OX=3702 GN=RPL34C PE=2 SV=1[more]
BLAST of CsGy1G002460 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A059D9F6|A0A059D9F6_EUCGR2.5e-5699.17Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03442 PE=4 SV... [more]
tr|A0A2P5D1Z7|A0A2P5D1Z7_9ROSA3.2e-5698.33Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_264940 PE=4 SV=1[more]
tr|A0A1S3BV34|A0A1S3BV34_CUCME5.5e-5699.1760S ribosomal protein L34 OS=Cucumis melo OX=3656 GN=LOC103493989 PE=4 SV=1[more]
tr|A0A059D8U9|A0A059D8U9_EUCGR5.5e-5698.33Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03433 PE=4 SV... [more]
tr|A0A0A0LK03|A0A0A0LK03_CUCSA5.5e-5699.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G338890 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR018065Ribosomal_L34e_CS
IPR038562Ribosomal_L34Ae_sf
IPR008195Ribosomal_L34Ae
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G002460.1CsGy1G002460.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008195Ribosomal protein L34AePRINTSPR01250RIBOSOMALL34coord: 13..26
score: 59.18
coord: 44..54
score: 50.0
coord: 26..43
score: 53.57
coord: 66..88
score: 44.72
IPR008195Ribosomal protein L34AePFAMPF01199Ribosomal_L34ecoord: 1..96
e-value: 2.8E-38
score: 130.0
IPR008195Ribosomal protein L34AePANTHERPTHR1075960S RIBOSOMAL PROTEIN L34coord: 1..120
IPR038562Ribosomal protein L34Ae superfamilyGENE3DG3DSA:3.40.1800.40coord: 39..120
e-value: 1.1E-33
score: 116.8
NoneNo IPR availablePANTHERPTHR10759:SF30SUBFAMILY NOT NAMEDcoord: 1..120
IPR018065Ribosomal protein L34e, conserved sitePROSITEPS01145RIBOSOMAL_L34Ecoord: 15..28

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G002460Csa1G009860Cucumber (Chinese Long) v2cgybcuB001
CsGy1G002460MELO3C017184Melon (DHL92) v3.5.1cgybmeB048
CsGy1G002460CSPI01G02410Wild cucumber (PI 183967)cgybcpiB001
CsGy1G002460MELO3C017184.2Melon (DHL92) v3.6.1cgybmedB043
CsGy1G002460CsaV3_1G002460Cucumber (Chinese Long) v3cgybcucB002
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G002460Watermelon (97103) v2cgybwmbB054
CsGy1G002460Watermelon (97103) v2cgybwmbB058
CsGy1G002460Watermelon (97103) v2cgybwmbB088
CsGy1G002460Wax gourdcgybwgoB009
CsGy1G002460Wax gourdcgybwgoB050
CsGy1G002460Wax gourdcgybwgoB067
CsGy1G002460Wax gourdcgybwgoB085
CsGy1G002460Wax gourdcgybwgoB092
CsGy1G002460Cucumber (Gy14) v2cgybcgybB002
CsGy1G002460Cucurbita maxima (Rimu)cgybcmaB004
CsGy1G002460Cucurbita maxima (Rimu)cgybcmaB040
CsGy1G002460Cucurbita maxima (Rimu)cgybcmaB103
CsGy1G002460Cucurbita maxima (Rimu)cgybcmaB106
CsGy1G002460Cucurbita maxima (Rimu)cgybcmaB130
CsGy1G002460Cucurbita moschata (Rifu)cgybcmoB005
CsGy1G002460Cucurbita moschata (Rifu)cgybcmoB028
CsGy1G002460Cucurbita moschata (Rifu)cgybcmoB100
CsGy1G002460Cucurbita moschata (Rifu)cgybcmoB119
CsGy1G002460Cucurbita pepo (Zucchini)cgybcpeB014
CsGy1G002460Cucurbita pepo (Zucchini)cgybcpeB053
CsGy1G002460Cucurbita pepo (Zucchini)cgybcpeB061
CsGy1G002460Cucurbita pepo (Zucchini)cgybcpeB101
CsGy1G002460Cucurbita pepo (Zucchini)cgybcpeB126
CsGy1G002460Cucumber (Chinese Long) v2cgybcuB004
CsGy1G002460Bottle gourd (USVL1VR-Ls)cgyblsiB021
CsGy1G002460Bottle gourd (USVL1VR-Ls)cgyblsiB040
CsGy1G002460Bottle gourd (USVL1VR-Ls)cgyblsiB067
CsGy1G002460Melon (DHL92) v3.5.1cgybmeB024
CsGy1G002460Melon (DHL92) v3.6.1cgybmedB005
CsGy1G002460Melon (DHL92) v3.6.1cgybmedB024
CsGy1G002460Watermelon (Charleston Gray)cgybwcgB003
CsGy1G002460Watermelon (Charleston Gray)cgybwcgB054
CsGy1G002460Watermelon (Charleston Gray)cgybwcgB078
CsGy1G002460Watermelon (97103) v1cgybwmB004
CsGy1G002460Watermelon (97103) v1cgybwmB065
CsGy1G002460Watermelon (97103) v1cgybwmB094
CsGy1G002460Wild cucumber (PI 183967)cgybcpiB003
CsGy1G002460Silver-seed gourdcarcgybB0053
CsGy1G002460Silver-seed gourdcarcgybB0470
CsGy1G002460Silver-seed gourdcarcgybB0611
CsGy1G002460Cucumber (Chinese Long) v3cgybcucB004
CsGy1G002460Cucumber (Chinese Long) v3cgybcucB039
CsGy1G002460Watermelon (97103) v2cgybwmbB076