CsGy1G002340 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G002340
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	pentatricopeptide repeat-containing protein At3g47530
Location	Chr1 : 1471872 .. 1473680 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGTCATCTTCCGCTCTCCTTCTATCCTCTCTTTGAAATACCGCCATCATTCTATTTCTTTTTCTCACTTCGAAAGAGAGCCTCTGATTTCTCTCATAAAATCATGCACCCACAAATCCCAATTGCTCCAAATCCATGCCCACATCATCACAACTTCTTCCGTTCAAGACCCCATTGTTTCCCTCCGCTTCTTGACGCGTACCGCCTCCGCCCCTTTTCGCGATTTGGGCTATTCTCGACGACTCTTTGATCTCCTGACTAACCCATTTGTTTCTCATTATAATGCGATGTTAAGAGCTTACTCTTTGAGCCGTTCACCACTAGAAGGATTGTACATGTACAGAGACATGGAGAGGCAAGGAGTTCGTGCTGATCCTTTGTCTTCTTCTTTTGCTGTTAAGTCGTGTATAAAATTGCTCTCGTTACTTTTCGGGATTCAGATTCACGCGAGGATTTTTAGAAATGGGCATCAAGCGGATAGTCTATTGCTCACTTCCATGATGGACCTGTATTCTCATTGTGGCAAACCTGAGGAAGCGTGCAAATTGTTCGATGAAGTTCCTCAAAAAGATGTTGTTGCTTGGAACGTTTTGATTTCTTGTTTAACTCGCAATAAACGAACTAGGGATGCTTTGGGTCTGTTTGAGATCATGCAGAGTCCAACGTATCTCTGCCAACCTGATAAAGTTACTTGTTTACTCCTCCTCCAAGCCTGTGCAGACTTGAATGCATTGGAGTTCGGTGAAAGGATTCATGGTTATATTCAACAACACGGTTATAATACTGAGAGTAATTTGTGTAATTCGCTGATATCAATGTATTCGCGGTGTGGGCGTATGGATAAGGCTTATGAGGTGTTTGATAAAATGACAGAGAAGAATGTTGTTTCATGGAGTGCGATGATTTCCGGGTTATCGATGAATGGGCACGGGAGGGAAGCTATTGAAGCATTTTGGGAGATGCAAAAGAATGGTGTCGAACCTGGTGATCATACTTTCACTGCTGTTCTTTCTGCTTGTAGCCACTGTGGCCTGGTTGATGAAGGAATGGCATTTTTTGATCGTATGAGACAGGAGTTCATGATAGCTCCCAACGTCCATCACTATGGATGTATAGTTGATCTTTTGGGTCGTGCTGGAATGCTCGATCAAGCCTACGAGCTCATAATGTCAATGGAGGTAAGACCAGATGCGACAATGTGGAGAACCCTTCTTGGAGCTTGCAGAATTCACGGTCATGGAAACCTTGGGGAGCGCATAGTTGAACATTTGATTGAACTCAAATCTCAAGAAGCAGGAGATTATGTGTTGTTGCTGAACATTTATTCTTCGGCTGGCAACTGGGACAAGGTAACTGAATTGAGGAAACTTATGAAGGAGAAGGGTATTTATACCACACCTTGCTGCACCACAATAGAACTGAACGGGGTGGTGCATCAATTTGCTGTGGATGATATTTCACATCCTATGAAAGACAAGATCTACAAGCAGTTGGATGAGATCAACAAGCAGCTAAAGATTGCAGGTTATGAAGCTGAAATGTCATCTGAATTACATAGATTAGAGCCAAAAGATAAAGGGTATGCACTTTCTAACCATAGTGAGAAATTGGCCATAGCCTTTGGGGTTCTTGCAACTCCGCCAGGAAGAACCATCAGAATCGCAAATAATATTCGTACTTGCATGGATTGTCATAACTTTGCTAAGTACATATCAAGTGTTTATAACAGAAAAGTGGTTGTTAGAGACCGAAGTCGGTTCCATCATTTCCAAGAGGGTCGGTGTTCCTGCAACGATTTTTGGTAA

mRNA sequence

ATGTGTGTCATCTTCCGCTCTCCTTCTATCCTCTCTTTGAAATACCGCCATCATTCTATTTCTTTTTCTCACTTCGAAAGAGAGCCTCTGATTTCTCTCATAAAATCATGCACCCACAAATCCCAATTGCTCCAAATCCATGCCCACATCATCACAACTTCTTCCGTTCAAGACCCCATTGTTTCCCTCCGCTTCTTGACGCGTACCGCCTCCGCCCCTTTTCGCGATTTGGGCTATTCTCGACGACTCTTTGATCTCCTGACTAACCCATTTGTTTCTCATTATAATGCGATGTTAAGAGCTTACTCTTTGAGCCGTTCACCACTAGAAGGATTGTACATGTACAGAGACATGGAGAGGCAAGGAGTTCGTGCTGATCCTTTGTCTTCTTCTTTTGCTGTTAAGTCGTGTATAAAATTGCTCTCGTTACTTTTCGGGATTCAGATTCACGCGAGGATTTTTAGAAATGGGCATCAAGCGGATAGTCTATTGCTCACTTCCATGATGGACCTGTATTCTCATTGTGGCAAACCTGAGGAAGCGTGCAAATTGTTCGATGAAGTTCCTCAAAAAGATGTTGTTGCTTGGAACGTTTTGATTTCTTGTTTAACTCGCAATAAACGAACTAGGGATGCTTTGGGTCTGTTTGAGATCATGCAGAGTCCAACGTATCTCTGCCAACCTGATAAAGTTACTTGTTTACTCCTCCTCCAAGCCTGTGCAGACTTGAATGCATTGGAGTTCGGTGAAAGGATTCATGGTTATATTCAACAACACGGTTATAATACTGAGAGTAATTTGTGTAATTCGCTGATATCAATGTATTCGCGGTGTGGGCGTATGGATAAGGCTTATGAGGTGTTTGATAAAATGACAGAGAAGAATGTTGTTTCATGGAGTGCGATGATTTCCGGGTTATCGATGAATGGGCACGGGAGGGAAGCTATTGAAGCATTTTGGGAGATGCAAAAGAATGGTGTCGAACCTGGTGATCATACTTTCACTGCTGTTCTTTCTGCTTGTAGCCACTGTGGCCTGGTTGATGAAGGAATGGCATTTTTTGATCGTATGAGACAGGAGTTCATGATAGCTCCCAACGTCCATCACTATGGATGTATAGTTGATCTTTTGGGTCGTGCTGGAATGCTCGATCAAGCCTACGAGCTCATAATGTCAATGGAGGTAAGACCAGATGCGACAATGTGGAGAACCCTTCTTGGAGCTTGCAGAATTCACGGTCATGGAAACCTTGGGGAGCGCATAGTTGAACATTTGATTGAACTCAAATCTCAAGAAGCAGGAGATTATGTGTTGTTGCTGAACATTTATTCTTCGGCTGGCAACTGGGACAAGGTAACTGAATTGAGGAAACTTATGAAGGAGAAGGGTATTTATACCACACCTTGCTGCACCACAATAGAACTGAACGGGGTGGTGCATCAATTTGCTGTGGATGATATTTCACATCCTATGAAAGACAAGATCTACAAGCAGTTGGATGAGATCAACAAGCAGCTAAAGATTGCAGGTTATGAAGCTGAAATGTCATCTGAATTACATAGATTAGAGCCAAAAGATAAAGGGTATGCACTTTCTAACCATAGTGAGAAATTGGCCATAGCCTTTGGGGTTCTTGCAACTCCGCCAGGAAGAACCATCAGAATCGCAAATAATATTCGTACTTGCATGGATTGTCATAACTTTGCTAAGTACATATCAAGTGTTTATAACAGAAAAGTGGTTGTTAGAGACCGAAGTCGGTTCCATCATTTCCAAGAGGGTCGGTGTTCCTGCAACGATTTTTGGTAA

Coding sequence (CDS)

ATGTGTGTCATCTTCCGCTCTCCTTCTATCCTCTCTTTGAAATACCGCCATCATTCTATTTCTTTTTCTCACTTCGAAAGAGAGCCTCTGATTTCTCTCATAAAATCATGCACCCACAAATCCCAATTGCTCCAAATCCATGCCCACATCATCACAACTTCTTCCGTTCAAGACCCCATTGTTTCCCTCCGCTTCTTGACGCGTACCGCCTCCGCCCCTTTTCGCGATTTGGGCTATTCTCGACGACTCTTTGATCTCCTGACTAACCCATTTGTTTCTCATTATAATGCGATGTTAAGAGCTTACTCTTTGAGCCGTTCACCACTAGAAGGATTGTACATGTACAGAGACATGGAGAGGCAAGGAGTTCGTGCTGATCCTTTGTCTTCTTCTTTTGCTGTTAAGTCGTGTATAAAATTGCTCTCGTTACTTTTCGGGATTCAGATTCACGCGAGGATTTTTAGAAATGGGCATCAAGCGGATAGTCTATTGCTCACTTCCATGATGGACCTGTATTCTCATTGTGGCAAACCTGAGGAAGCGTGCAAATTGTTCGATGAAGTTCCTCAAAAAGATGTTGTTGCTTGGAACGTTTTGATTTCTTGTTTAACTCGCAATAAACGAACTAGGGATGCTTTGGGTCTGTTTGAGATCATGCAGAGTCCAACGTATCTCTGCCAACCTGATAAAGTTACTTGTTTACTCCTCCTCCAAGCCTGTGCAGACTTGAATGCATTGGAGTTCGGTGAAAGGATTCATGGTTATATTCAACAACACGGTTATAATACTGAGAGTAATTTGTGTAATTCGCTGATATCAATGTATTCGCGGTGTGGGCGTATGGATAAGGCTTATGAGGTGTTTGATAAAATGACAGAGAAGAATGTTGTTTCATGGAGTGCGATGATTTCCGGGTTATCGATGAATGGGCACGGGAGGGAAGCTATTGAAGCATTTTGGGAGATGCAAAAGAATGGTGTCGAACCTGGTGATCATACTTTCACTGCTGTTCTTTCTGCTTGTAGCCACTGTGGCCTGGTTGATGAAGGAATGGCATTTTTTGATCGTATGAGACAGGAGTTCATGATAGCTCCCAACGTCCATCACTATGGATGTATAGTTGATCTTTTGGGTCGTGCTGGAATGCTCGATCAAGCCTACGAGCTCATAATGTCAATGGAGGTAAGACCAGATGCGACAATGTGGAGAACCCTTCTTGGAGCTTGCAGAATTCACGGTCATGGAAACCTTGGGGAGCGCATAGTTGAACATTTGATTGAACTCAAATCTCAAGAAGCAGGAGATTATGTGTTGTTGCTGAACATTTATTCTTCGGCTGGCAACTGGGACAAGGTAACTGAATTGAGGAAACTTATGAAGGAGAAGGGTATTTATACCACACCTTGCTGCACCACAATAGAACTGAACGGGGTGGTGCATCAATTTGCTGTGGATGATATTTCACATCCTATGAAAGACAAGATCTACAAGCAGTTGGATGAGATCAACAAGCAGCTAAAGATTGCAGGTTATGAAGCTGAAATGTCATCTGAATTACATAGATTAGAGCCAAAAGATAAAGGGTATGCACTTTCTAACCATAGTGAGAAATTGGCCATAGCCTTTGGGGTTCTTGCAACTCCGCCAGGAAGAACCATCAGAATCGCAAATAATATTCGTACTTGCATGGATTGTCATAACTTTGCTAAGTACATATCAAGTGTTTATAACAGAAAAGTGGTTGTTAGAGACCGAAGTCGGTTCCATCATTTCCAAGAGGGTCGGTGTTCCTGCAACGATTTTTGGTAA

Protein sequence

MCVIFRSPSILSLKYRHHSISFSHFEREPLISLIKSCTHKSQLLQIHAHIITTSSVQDPIVSLRFLTRTASAPFRDLGYSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW

Homology

[Close]

BLAST of CsGy1G002340 vs. NCBI nr
Match: XP_011660092.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g47530 [Cucumis sativus] >KGN63671.1 hypothetical protein Csa_1G009750 [Cucumis sativus])

HSP 1 Score: 1233.8 bits (3191), Expect = 0.0e+00
Identity = 599/602 (99.50%), Postives = 600/602 (99.67%), Query Frame = 0


Query: 1   MCVIFRSPSILSLKYRHHSISFSHFEREPLISLIKSCTHKSQLLQIHAHIITTSSVQDPI 60
           MCVIFRSPSILSLKY HHSISFSHFEREPLISLIKSCTHKSQLLQIHAHIITTSS+QDPI
Sbjct: 1   MCVIFRSPSILSLKYHHHSISFSHFEREPLISLIKSCTHKSQLLQIHAHIITTSSIQDPI 60

Query: 61  VSLRFLTRTASAPFRDLGYSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMER 120
           VSLRFLTRTASAPFRDLGYSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMER
Sbjct: 61  VSLRFLTRTASAPFRDLGYSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMER 120

Query: 121 QGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNGHQADSLLLTSMMDLYSHCGKPEE 180
           QGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIF NGHQADSLLLTSMMDLYSHCGKPEE
Sbjct: 121 QGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFINGHQADSLLLTSMMDLYSHCGKPEE 180

Query: 181 ACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQAC 240
           ACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQAC
Sbjct: 181 ACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQAC 240

Query: 241 ADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWS 300
           ADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWS
Sbjct: 241 ADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWS 300

Query: 301 AMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQE 360
           AMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQE
Sbjct: 301 AMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQE 360

Query: 361 FMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGER 420
           FMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGER
Sbjct: 361 FMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGER 420

Query: 421 IVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVH 480
           IVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVH
Sbjct: 421 IVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVH 480

Query: 481 QFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLAI 540
           QFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLAI
Sbjct: 481 QFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLAI 540

Query: 541 AFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCND 600
           AFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCND
Sbjct: 541 AFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCND 600

Query: 601 FW 603
           FW
Sbjct: 601 FW 602

[Close]

BLAST of CsGy1G002340 vs. NCBI nr
Match: XP_008453206.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g47530 [Cucumis melo])

HSP 1 Score: 1143.6 bits (2957), Expect = 0.0e+00
Identity = 561/602 (93.19%), Postives = 570/602 (94.68%), Query Frame = 0


Query: 1   MCVIFRSPSILSLKYRHHSISFSHFEREPLISLIKSCTHKSQLLQIHAHIITTSSVQDPI 60
           M VIF  PSILS                 LISLIKSCTHKSQLLQIHAHII TSS+QDPI
Sbjct: 1   MYVIFHRPSILS-----------------LISLIKSCTHKSQLLQIHAHIIRTSSIQDPI 60

Query: 61  VSLRFLTRTASAPFRDLGYSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMER 120
           VSLRFLTRTASAPFRDLGYSRR  DLLTNP VSHYNAMLRAYS+SRSPLEGLY+YRDMER
Sbjct: 61  VSLRFLTRTASAPFRDLGYSRRFLDLLTNPLVSHYNAMLRAYSVSRSPLEGLYVYRDMER 120

Query: 121 QGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNGHQADSLLLTSMMDLYSHCGKPEE 180
           QGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIF  GHQADSLLLTSMMDLYSHCGKPEE
Sbjct: 121 QGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFIYGHQADSLLLTSMMDLYSHCGKPEE 180

Query: 181 ACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQAC 240
           ACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQAC
Sbjct: 181 ACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQAC 240

Query: 241 ADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWS 300
           ADLNALEFGERIHGYIQQH YNTESNLCNSLISMYSRCGR+DKAYEVFDKM EKNVVSWS
Sbjct: 241 ADLNALEFGERIHGYIQQHCYNTESNLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWS 300

Query: 301 AMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQE 360
           AMISGLSMNGHGREAIEAFWEMQKNGVEP DHTFTAVLSACSHCGLVDEGMAFFDRMRQE
Sbjct: 301 AMISGLSMNGHGREAIEAFWEMQKNGVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQE 360

Query: 361 FMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGER 420
            MIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGH NLGER
Sbjct: 361 LMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHANLGER 420

Query: 421 IVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVH 480
           IVEHLIELKSQEAGDYVLLLNIYSSAG WDKVTELRKLMKEKGIYTTPCCTTIELNGVVH
Sbjct: 421 IVEHLIELKSQEAGDYVLLLNIYSSAGKWDKVTELRKLMKEKGIYTTPCCTTIELNGVVH 480

Query: 481 QFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLAI 540
           +FAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRL+P+DKGYALSNHSEKLAI
Sbjct: 481 EFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLKPEDKGYALSNHSEKLAI 540

Query: 541 AFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCND 600
           AFGVLATPPGRTIR+ANNIRTCMDCHNFAKYISSVYNRKVV+RDRSRFHHFQEGRCSCND
Sbjct: 541 AFGVLATPPGRTIRVANNIRTCMDCHNFAKYISSVYNRKVVLRDRSRFHHFQEGRCSCND 585

Query: 601 FW 603
           FW
Sbjct: 601 FW 585

[Close]

BLAST of CsGy1G002340 vs. NCBI nr
Match: XP_023515406.1 (pentatricopeptide repeat-containing protein At3g47530 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1100.1 bits (2844), Expect = 0.0e+00
Identity = 530/600 (88.33%), Postives = 563/600 (93.83%), Query Frame = 0


Query: 4   IFRSP-SILSLKYRHHSISFSHFEREPLISLIKSCTHKSQLLQIHAHIITTSSVQDPIVS 63
           +  SP S+LS K+R  + S   F+REPLISLIKSCTHKSQLLQIHAH+I TS +QDPIVS
Sbjct: 30  LLHSPISLLSSKFREQN-STLRFDREPLISLIKSCTHKSQLLQIHAHMIRTSFIQDPIVS 89

Query: 64  LRFLTRTASAPFRDLGYSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQG 123
           LRFLTR  SAPFR+LGYSRR F  LTNPFVSHYN +LRAYSLSRSPLEGLYMYRDMERQG
Sbjct: 90  LRFLTRIVSAPFRELGYSRRFFSQLTNPFVSHYNTLLRAYSLSRSPLEGLYMYRDMERQG 149

Query: 124 VRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNGHQADSLLLTSMMDLYSHCGKPEEAC 183
           V ADPLSSSFAVKSCI++LSL  GIQIHARIFRNGHQ+DSLLLTSMMDLYSHCGK E+AC
Sbjct: 150 VHADPLSSSFAVKSCIRMLSLFSGIQIHARIFRNGHQSDSLLLTSMMDLYSHCGKLEDAC 209

Query: 184 KLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACAD 243
           KLFDE+PQ+DVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLC+PDKVTCLLLLQACAD
Sbjct: 210 KLFDEIPQRDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCKPDKVTCLLLLQACAD 269

Query: 244 LNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAM 303
           LNALEFGERIH YIQQ+ YNTESNLCNSLISMYSRCGR+DKAYEVFDKM EKNVVSWSAM
Sbjct: 270 LNALEFGERIHSYIQQNDYNTESNLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAM 329

Query: 304 ISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFM 363
           ISGLSMNGHGREAIEAFW MQK GVEP DHTFTAVLSACSHCGLVDEGMAFFDRMRQEFM
Sbjct: 330 ISGLSMNGHGREAIEAFWAMQKKGVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFM 389

Query: 364 IAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGERIV 423
           I P VHHYGC+VDLLGRAGMLDQAY+L+MSMEV PDATMWRTLLGACRIHGH NLGERI+
Sbjct: 390 IVPTVHHYGCMVDLLGRAGMLDQAYQLVMSMEVNPDATMWRTLLGACRIHGHANLGERII 449

Query: 424 EHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHQF 483
           EHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRK MKE+GIYTTP CTTIELNGVVH+F
Sbjct: 450 EHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKFMKERGIYTTPGCTTIELNGVVHEF 509

Query: 484 AVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLAIAF 543
           AVDDISHPMKDKIYKQLDEIN+QLKIAGYEAE+SSELH L+ +DKGYALS HSEKLAIAF
Sbjct: 510 AVDDISHPMKDKIYKQLDEINQQLKIAGYEAEISSELHNLKAEDKGYALSYHSEKLAIAF 569

Query: 544 GVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW 603
           GVLATPPGRTIR+ANN+RTCMDCHNFAKY+SSVYNRKVVVRDRSRFHHF+EGRCSCND+W
Sbjct: 570 GVLATPPGRTIRVANNLRTCMDCHNFAKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 628

[Close]

BLAST of CsGy1G002340 vs. NCBI nr
Match: XP_022921651.1 (pentatricopeptide repeat-containing protein At3g47530 [Cucurbita moschata])

HSP 1 Score: 1097.8 bits (2838), Expect = 0.0e+00
Identity = 528/600 (88.00%), Postives = 563/600 (93.83%), Query Frame = 0


Query: 4   IFRSP-SILSLKYRHHSISFSHFEREPLISLIKSCTHKSQLLQIHAHIITTSSVQDPIVS 63
           +  SP S+LS K+R  + S   F+REPLISLIKSCTHKSQLLQIHAH+I TS +QDPIVS
Sbjct: 30  LLHSPISLLSSKFREQN-STLRFDREPLISLIKSCTHKSQLLQIHAHMIRTSFIQDPIVS 89

Query: 64  LRFLTRTASAPFRDLGYSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQG 123
           LRFLTR  SAPFR+LGYSRR F  LTNPFVSHYN +LRAYSLSRSPLEGLYMYRDMER+G
Sbjct: 90  LRFLTRIVSAPFRELGYSRRFFSQLTNPFVSHYNTLLRAYSLSRSPLEGLYMYRDMERRG 149

Query: 124 VRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNGHQADSLLLTSMMDLYSHCGKPEEAC 183
           V ADPLSSSFAVKSCI++LSL  G+QIHARIFRNGHQ+DSLLLTSMMDLYSHCGK E+AC
Sbjct: 150 VHADPLSSSFAVKSCIRMLSLFSGVQIHARIFRNGHQSDSLLLTSMMDLYSHCGKLEDAC 209

Query: 184 KLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACAD 243
           KLFDE+PQ+DVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLC+PDKVTCLLLLQACAD
Sbjct: 210 KLFDEIPQRDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCKPDKVTCLLLLQACAD 269

Query: 244 LNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAM 303
           LNALEFGERIH +IQQHGYNTESNLCNSLISMYSRCGR+DKAYEVFDKM EKNVVSWSAM
Sbjct: 270 LNALEFGERIHSHIQQHGYNTESNLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAM 329

Query: 304 ISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFM 363
           ISGLSMNGHGREAIEAFW MQK GVEP DHTFTAVLSACSHCGLVDEGMAFFDRMRQEFM
Sbjct: 330 ISGLSMNGHGREAIEAFWAMQKKGVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFM 389

Query: 364 IAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGERIV 423
           I P VHHYGC+VDLLGRAGMLDQAY+L+MSMEV PDATMWRTLLGACRIHGH NLGERI+
Sbjct: 390 IVPTVHHYGCMVDLLGRAGMLDQAYQLVMSMEVNPDATMWRTLLGACRIHGHANLGERII 449

Query: 424 EHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHQF 483
           EHLIELKSQEAGDYVLLLNIYSSAGNW KVTELRK MKE+GIYTTP CTTIELNGVVH+F
Sbjct: 450 EHLIELKSQEAGDYVLLLNIYSSAGNWVKVTELRKFMKERGIYTTPGCTTIELNGVVHEF 509

Query: 484 AVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLAIAF 543
           AVDDISHPMKDKIY+QLDEINKQLKIAGYEAE+SSELH L+ +DKGYALS HSEKLAIAF
Sbjct: 510 AVDDISHPMKDKIYEQLDEINKQLKIAGYEAEISSELHNLKAEDKGYALSFHSEKLAIAF 569

Query: 544 GVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW 603
           GVLATPPGRTIR+ANN+RTCMDCHNFAKY+SSVYNRKVVVRDRSRFHHF+EGRCSCND+W
Sbjct: 570 GVLATPPGRTIRVANNLRTCMDCHNFAKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 628

[Close]

BLAST of CsGy1G002340 vs. NCBI nr
Match: XP_022987181.1 (pentatricopeptide repeat-containing protein At3g47530 [Cucurbita maxima])

HSP 1 Score: 1097.4 bits (2837), Expect = 0.0e+00
Identity = 525/600 (87.50%), Postives = 564/600 (94.00%), Query Frame = 0


Query: 4   IFRSP-SILSLKYRHHSISFSHFEREPLISLIKSCTHKSQLLQIHAHIITTSSVQDPIVS 63
           +  SP S+LS K+R  + S  HF+REPLISLIKSCTHKSQLLQIHAH+I TS +QDPIVS
Sbjct: 30  LLHSPISLLSSKFRQQN-STLHFDREPLISLIKSCTHKSQLLQIHAHMIRTSFIQDPIVS 89

Query: 64  LRFLTRTASAPFRDLGYSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQG 123
           LRFLTR  SAPFR+LGYSRR F  LTNPFVSHYN +LRAYSLSRSPLEGLYMYRDMERQG
Sbjct: 90  LRFLTRIVSAPFRELGYSRRFFSQLTNPFVSHYNTLLRAYSLSRSPLEGLYMYRDMERQG 149

Query: 124 VRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNGHQADSLLLTSMMDLYSHCGKPEEAC 183
           V ADPLSSSFA+KSCI++LSL  GIQIHARIFRNGHQ+DSLLLTSMMDLYSHCGK ++AC
Sbjct: 150 VHADPLSSSFALKSCIRMLSLFSGIQIHARIFRNGHQSDSLLLTSMMDLYSHCGKLKDAC 209

Query: 184 KLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACAD 243
           KLFDE+PQ+DVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLC+PDKVTCLLLLQACAD
Sbjct: 210 KLFDEIPQRDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCKPDKVTCLLLLQACAD 269

Query: 244 LNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAM 303
           LNALEFGERIH +IQQHGYNTESNLCNSLISMYSRCGR+DKAYEVFDKM EKNVVSWSAM
Sbjct: 270 LNALEFGERIHSHIQQHGYNTESNLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAM 329

Query: 304 ISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFM 363
           ISGLSMNGHGREAIEAFW MQK GVEP DHTFTAVLSACSHCGLVDEGMAFFDRMRQEFM
Sbjct: 330 ISGLSMNGHGREAIEAFWAMQKKGVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFM 389

Query: 364 IAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGERIV 423
           I P VHHYGC+VDLLGRAGMLDQAY+L+MSMEV PDATMWRTLLGACRIHGH NLGER++
Sbjct: 390 IVPTVHHYGCMVDLLGRAGMLDQAYQLVMSMEVNPDATMWRTLLGACRIHGHANLGERVI 449

Query: 424 EHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHQF 483
           EHL+ELKSQEAGDYVLLLNIYSSAGNWDKVTELRK MKE+GIYTTP CTTIELNGVVH+F
Sbjct: 450 EHLVELKSQEAGDYVLLLNIYSSAGNWDKVTELRKFMKERGIYTTPGCTTIELNGVVHEF 509

Query: 484 AVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLAIAF 543
           AVDDISHPMKDKIYKQLDEIN+QLKIAGYEAE+SSELH L+ +DKGYALS HSEKLAIAF
Sbjct: 510 AVDDISHPMKDKIYKQLDEINQQLKIAGYEAEISSELHNLKAEDKGYALSFHSEKLAIAF 569

Query: 544 GVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW 603
           GVLATPPG TIR+ANN+RTC+DCHNFAKY+SSVYNRKVVVRDRS+FHHF+EGRCSCND+W
Sbjct: 570 GVLATPPGGTIRVANNLRTCLDCHNFAKYVSSVYNRKVVVRDRSQFHHFREGRCSCNDYW 628

[Close]

BLAST of CsGy1G002340 vs. TAIR10
Match: AT3G47530.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 733.0 bits (1891), Expect = 1.5e-211
Identity = 358/578 (61.94%), Postives = 450/578 (77.85%), Query Frame = 0


Query: 30  LISLIKSCTHKSQLLQIHAHIITTSSVQDPIVSLRFLTRTA-SAPFRDLGYSRRLFDLLT 89
           L+SLI S T K  L QIHA ++ TS +++  V   FL+R A S   RD+ YS R+F    
Sbjct: 14  LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRL 73

Query: 90  NPFVSHYNAMLRAYSLSRSPLEGLYMYRDMER-QGVRADPLSSSFAVKSCIKLLSLLFGI 149
           NP +SH N M+RA+SLS++P EG  ++R + R   + A+PLSSSFA+K CIK   LL G+
Sbjct: 74  NPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGL 133

Query: 150 QIHARIFRNGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNK 209
           QIH +IF +G  +DSLL+T++MDLYS C    +ACK+FDE+P++D V+WNVL SC  RNK
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNK 193

Query: 210 RTRDALGLFEIMQSPTYLC-QPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESN 269
           RTRD L LF+ M++    C +PD VTCLL LQACA+L AL+FG+++H +I ++G +   N
Sbjct: 194 RTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALN 253

Query: 270 LCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNG 329
           L N+L+SMYSRCG MDKAY+VF  M E+NVVSW+A+ISGL+MNG G+EAIEAF EM K G
Sbjct: 254 LSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG 313

Query: 330 VEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQ-EFMIAPNVHHYGCIVDLLGRAGMLDQ 389
           + P + T T +LSACSH GLV EGM FFDRMR  EF I PN+HHYGC+VDLLGRA +LD+
Sbjct: 314 ISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDK 373

Query: 390 AYELIMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSS 449
           AY LI SME++PD+T+WRTLLGACR+HG   LGER++ HLIELK++EAGDYVLLLN YS+
Sbjct: 374 AYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYST 433

Query: 450 AGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQ 509
            G W+KVTELR LMKEK I+T P C+ IEL G VH+F VDD+SHP K++IYK L EIN+Q
Sbjct: 434 VGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQ 493

Query: 510 LKIAGYEAEMSSELHRLE-PKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMD 569
           LKIAGY AE++SELH LE  ++KGYAL  HSEKLAIAFG+L TPPG TIR+  N+RTC+D
Sbjct: 494 LKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVD 553

Query: 570 CHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW 603
           CHNFAK++S VY+R V+VRDRSRFHHF+ G CSCNDFW
Sbjct: 554 CHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591

[Close]

BLAST of CsGy1G002340 vs. TAIR10
Match: AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 437.6 bits (1124), Expect = 1.3e-122
Identity = 220/580 (37.93%), Postives = 351/580 (60.52%), Query Frame = 0


Query: 33  LIKSCTHKSQL---LQIHAHIITTSSVQDPIVSLRFLTRTASAPFRDLG---YSRRLFDL 92
           LI  C H+S L   L++H HI+   S QDP     FL       + DLG   Y+R++FD 
Sbjct: 83  LILCCGHRSSLSDALRVHRHILDNGSDQDP-----FLATKLIGMYSDLGSVDYARKVFDK 142

Query: 93  LTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCI----KLLS 152
                +  +NA+ RA +L+    E L +Y  M R GV +D  + ++ +K+C+     +  
Sbjct: 143 TRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNH 202

Query: 153 LLFGIQIHARIFRNGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISC 212
           L+ G +IHA + R G+ +   ++T+++D+Y+  G  + A  +F  +P ++VV+W+ +I+C
Sbjct: 203 LMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIAC 262

Query: 213 LTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYN 272
             +N +  +AL  F  M   T    P+ VT + +LQACA L ALE G+ IHGYI + G +
Sbjct: 263 YAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLD 322

Query: 273 TESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEM 332
           +   + ++L++MY RCG+++    VFD+M +++VVSW+++IS   ++G+G++AI+ F EM
Sbjct: 323 SILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEM 382

Query: 333 QKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGM 392
             NG  P   TF +VL ACSH GLV+EG   F+ M ++  I P + HY C+VDLLGRA  
Sbjct: 383 LANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANR 442

Query: 393 LDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNI 452
           LD+A +++  M   P   +W +LLG+CRIHG+  L ER    L  L+ + AG+YVLL +I
Sbjct: 443 LDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADI 502

Query: 453 YSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEI 512
           Y+ A  WD+V  ++KL++ +G+   P    +E+   ++ F   D  +P+ ++I+  L ++
Sbjct: 503 YAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKL 562

Query: 513 NKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTC 572
            + +K  GY  +    L+ LE ++K   +  HSEKLA+AFG++ T  G  IRI  N+R C
Sbjct: 563 AEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLC 622

Query: 573 MDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW 603
            DCH F K+IS    ++++VRD +RFH F+ G CSC D+W
Sbjct: 623 EDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657

[Close]

BLAST of CsGy1G002340 vs. TAIR10
Match: AT3G56550.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 436.8 bits (1122), Expect = 2.2e-122
Identity = 223/576 (38.72%), Postives = 348/576 (60.42%), Query Frame = 0


Query: 30  LISLIKSCTHKSQLLQIHAHIITTSSVQDPIVSLRFLTRTASAPFRDLGYSRRLFDLL-T 89
           ++ +++ C    +L +IH+H+I       P +    L   A +    L +++ LFD   +
Sbjct: 8   IVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDS 67

Query: 90  NPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGV-RADPLSSSFAVKSCIKLLSLLFGI 149
           +P  S +N ++R +S S SPL  +  Y  M    V R D  + +FA+KSC ++ S+   +
Sbjct: 68  DPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCL 127

Query: 150 QIHARIFRNGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNK 209
           +IH  + R+G   D+++ TS++  YS  G  E A K+FDE+P +D+V+WNV+I C +   
Sbjct: 128 EIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVG 187

Query: 210 RTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNL 269
               AL +++ M +   +C  D  T + LL +CA ++AL  G  +H         +   +
Sbjct: 188 LHNQALSMYKRMGNEG-VC-GDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFV 247

Query: 270 CNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGV 329
            N+LI MY++CG ++ A  VF+ M +++V++W++MI G  ++GHG EAI  F +M  +GV
Sbjct: 248 SNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGV 307

Query: 330 EPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAY 389
            P   TF  +L  CSH GLV EG+  F+ M  +F + PNV HYGC+VDL GRAG L+ + 
Sbjct: 308 RPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSL 367

Query: 390 ELIMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAG 449
           E+I +     D  +WRTLLG+C+IH +  LGE  ++ L++L++  AGDYVL+ +IYS+A 
Sbjct: 368 EMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAAN 427

Query: 450 NWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLK 509
           +      +RKL++   + T P  + IE+   VH+F VDD  HP    IY +L E+  +  
Sbjct: 428 DAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAI 487

Query: 510 IAGYEAEMSSE-LHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCH 569
           +AGY+ E S+     L  +  G A ++HSEKLAIA+G++ T  G T+RI  N+R C DCH
Sbjct: 488 LAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCH 547

Query: 570 NFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW 603
           +F KY+S  +NR+++VRDR RFHHF +G CSCND+W
Sbjct: 548 SFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581

[Close]

BLAST of CsGy1G002340 vs. TAIR10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 429.9 bits (1104), Expect = 2.6e-120
Identity = 204/486 (41.98%), Postives = 312/486 (64.20%), Query Frame = 0


Query: 120 RQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNGHQADSLLLTSMMDLYSHCGKPE 179
           +  VR D  +    V +C +  S+  G Q+H  I  +G  ++  ++ +++DLYS CG+ E
Sbjct: 259 KTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELE 318

Query: 180 EACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLF-EIMQSPTYLCQPDKVTCLLLLQ 239
            AC LF+ +P KDV++WN LI   T     ++AL LF E+++S      P+ VT L +L 
Sbjct: 319 TACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE---TPNDVTMLSILP 378

Query: 240 ACADLNALEFGERIHGYIQQH--GYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNV 299
           ACA L A++ G  IH YI +   G    S+L  SLI MY++CG ++ A++VF+ +  K++
Sbjct: 379 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 438

Query: 300 VSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDR 359
            SW+AMI G +M+G    + + F  M+K G++P D TF  +LSACSH G++D G   F  
Sbjct: 439 SSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRT 498

Query: 360 MRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGN 419
           M Q++ + P + HYGC++DLLG +G+  +A E+I  ME+ PD  +W +LL AC++HG+  
Sbjct: 499 MTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVE 558

Query: 420 LGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELN 479
           LGE   E+LI+++ +  G YVLL NIY+SAG W++V + R L+ +KG+   P C++IE++
Sbjct: 559 LGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEID 618

Query: 480 GVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSE 539
            VVH+F + D  HP   +IY  L+E+   L+ AG+  + S  L  +E + K  AL +HSE
Sbjct: 619 SVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSE 678

Query: 540 KLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRC 599
           KLAIAFG+++T PG  + I  N+R C +CH   K IS +Y R+++ RDR+RFHHF++G C
Sbjct: 679 KLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVC 738

Query: 600 SCNDFW 603
           SCND+W
Sbjct: 739 SCNDYW 741

[Close]

BLAST of CsGy1G002340 vs. TAIR10
Match: AT1G34160.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 422.5 bits (1085), Expect = 4.2e-118
Identity = 219/582 (37.63%), Postives = 346/582 (59.45%), Query Frame = 0


Query: 32  SLIKSCTHKSQLLQIHAHIITTSSVQDPIVSLRFLTRTASAPFRDLGYSRRLFDLLTNPF 91
           ++I+ C   SQ+ Q+ +H +T    Q   +  R L R A +PF DL ++ ++F  +  P 
Sbjct: 8   TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67

Query: 92  VSHYNAMLRAYSLSRSPLEGLYMYRDMERQG------VRADPLSSSFAVKSCIKLLSLLF 151
            + +NA++R ++ S  P      YR M +Q        R D L+ SF +K+C + L    
Sbjct: 68  TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127

Query: 152 GIQIHARIFRNGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTR 211
             Q+H +I R G  ADSLL T+++D YS  G    A KLFDE+P +DV +WN LI+ L  
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVS 187

Query: 212 NKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTES 271
             R  +A+ L++ M+  T   +  +VT +  L AC+ L  ++ GE I      HGY+ ++
Sbjct: 188 GNRASEAMELYKRME--TEGIRRSEVTVVAALGACSHLGDVKEGENIF-----HGYSNDN 247

Query: 272 NL-CNSLISMYSRCGRMDKAYEVFDKMT-EKNVVSWSAMISGLSMNGHGREAIEAFWEMQ 331
            +  N+ I MYS+CG +DKAY+VF++ T +K+VV+W+ MI+G +++G    A+E F +++
Sbjct: 248 VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLE 307

Query: 332 KNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGML 391
            NG++P D ++ A L+AC H GLV+ G++ F+ M  +  +  N+ HYGC+VDLL RAG L
Sbjct: 308 DNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRL 367

Query: 392 DQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIY 451
            +A+++I SM + PD  +W++LLGA  I+    + E     + E+     GD+VLL N+Y
Sbjct: 368 REAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVY 427

Query: 452 SSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEIN 511
           ++ G W  V  +R  M+ K +   P  + IE  G +H+F   D SH    +IY+++DEI 
Sbjct: 428 AAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIR 487

Query: 512 KQLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLAIAFGVL---ATPPGRTIRIANNIR 571
            +++  GY A+    LH +  ++K  AL  HSEKLA+A+G++          +R+ NN+R
Sbjct: 488 FKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLR 547

Query: 572 TCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW 603
            C DCH   K+IS +Y R+++VRDR RFH F++G CSC DFW
Sbjct: 548 ICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581

[Close]

BLAST of CsGy1G002340 vs. Swiss-Prot
Match: sp|Q9SN85|PP267_ARATH (Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H76 PE=2 SV=1)

HSP 1 Score: 733.0 bits (1891), Expect = 2.6e-210
Identity = 358/578 (61.94%), Postives = 450/578 (77.85%), Query Frame = 0


Query: 30  LISLIKSCTHKSQLLQIHAHIITTSSVQDPIVSLRFLTRTA-SAPFRDLGYSRRLFDLLT 89
           L+SLI S T K  L QIHA ++ TS +++  V   FL+R A S   RD+ YS R+F    
Sbjct: 14  LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRL 73

Query: 90  NPFVSHYNAMLRAYSLSRSPLEGLYMYRDMER-QGVRADPLSSSFAVKSCIKLLSLLFGI 149
           NP +SH N M+RA+SLS++P EG  ++R + R   + A+PLSSSFA+K CIK   LL G+
Sbjct: 74  NPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGL 133

Query: 150 QIHARIFRNGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNK 209
           QIH +IF +G  +DSLL+T++MDLYS C    +ACK+FDE+P++D V+WNVL SC  RNK
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNK 193

Query: 210 RTRDALGLFEIMQSPTYLC-QPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESN 269
           RTRD L LF+ M++    C +PD VTCLL LQACA+L AL+FG+++H +I ++G +   N
Sbjct: 194 RTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALN 253

Query: 270 LCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNG 329
           L N+L+SMYSRCG MDKAY+VF  M E+NVVSW+A+ISGL+MNG G+EAIEAF EM K G
Sbjct: 254 LSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG 313

Query: 330 VEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQ-EFMIAPNVHHYGCIVDLLGRAGMLDQ 389
           + P + T T +LSACSH GLV EGM FFDRMR  EF I PN+HHYGC+VDLLGRA +LD+
Sbjct: 314 ISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDK 373

Query: 390 AYELIMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSS 449
           AY LI SME++PD+T+WRTLLGACR+HG   LGER++ HLIELK++EAGDYVLLLN YS+
Sbjct: 374 AYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYST 433

Query: 450 AGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQ 509
            G W+KVTELR LMKEK I+T P C+ IEL G VH+F VDD+SHP K++IYK L EIN+Q
Sbjct: 434 VGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQ 493

Query: 510 LKIAGYEAEMSSELHRLE-PKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMD 569
           LKIAGY AE++SELH LE  ++KGYAL  HSEKLAIAFG+L TPPG TIR+  N+RTC+D
Sbjct: 494 LKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVD 553

Query: 570 CHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW 603
           CHNFAK++S VY+R V+VRDRSRFHHF+ G CSCNDFW
Sbjct: 554 CHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591

[Close]

BLAST of CsGy1G002340 vs. Swiss-Prot
Match: sp|Q9STF3|PP265_ARATH (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 2.3e-121
Identity = 220/580 (37.93%), Postives = 351/580 (60.52%), Query Frame = 0


Query: 33  LIKSCTHKSQL---LQIHAHIITTSSVQDPIVSLRFLTRTASAPFRDLG---YSRRLFDL 92
           LI  C H+S L   L++H HI+   S QDP     FL       + DLG   Y+R++FD 
Sbjct: 83  LILCCGHRSSLSDALRVHRHILDNGSDQDP-----FLATKLIGMYSDLGSVDYARKVFDK 142

Query: 93  LTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCI----KLLS 152
                +  +NA+ RA +L+    E L +Y  M R GV +D  + ++ +K+C+     +  
Sbjct: 143 TRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNH 202

Query: 153 LLFGIQIHARIFRNGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISC 212
           L+ G +IHA + R G+ +   ++T+++D+Y+  G  + A  +F  +P ++VV+W+ +I+C
Sbjct: 203 LMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIAC 262

Query: 213 LTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYN 272
             +N +  +AL  F  M   T    P+ VT + +LQACA L ALE G+ IHGYI + G +
Sbjct: 263 YAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLD 322

Query: 273 TESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEM 332
           +   + ++L++MY RCG+++    VFD+M +++VVSW+++IS   ++G+G++AI+ F EM
Sbjct: 323 SILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEM 382

Query: 333 QKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGM 392
             NG  P   TF +VL ACSH GLV+EG   F+ M ++  I P + HY C+VDLLGRA  
Sbjct: 383 LANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANR 442

Query: 393 LDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNI 452
           LD+A +++  M   P   +W +LLG+CRIHG+  L ER    L  L+ + AG+YVLL +I
Sbjct: 443 LDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADI 502

Query: 453 YSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEI 512
           Y+ A  WD+V  ++KL++ +G+   P    +E+   ++ F   D  +P+ ++I+  L ++
Sbjct: 503 YAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKL 562

Query: 513 NKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTC 572
            + +K  GY  +    L+ LE ++K   +  HSEKLA+AFG++ T  G  IRI  N+R C
Sbjct: 563 AEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLC 622

Query: 573 MDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW 603
            DCH F K+IS    ++++VRD +RFH F+ G CSC D+W
Sbjct: 623 EDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657

[Close]

BLAST of CsGy1G002340 vs. Swiss-Prot
Match: sp|Q9LXY5|PP284_ARATH (Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H80 PE=2 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 3.9e-121
Identity = 223/576 (38.72%), Postives = 348/576 (60.42%), Query Frame = 0


Query: 30  LISLIKSCTHKSQLLQIHAHIITTSSVQDPIVSLRFLTRTASAPFRDLGYSRRLFDLL-T 89
           ++ +++ C    +L +IH+H+I       P +    L   A +    L +++ LFD   +
Sbjct: 8   IVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDS 67

Query: 90  NPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGV-RADPLSSSFAVKSCIKLLSLLFGI 149
           +P  S +N ++R +S S SPL  +  Y  M    V R D  + +FA+KSC ++ S+   +
Sbjct: 68  DPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCL 127

Query: 150 QIHARIFRNGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNK 209
           +IH  + R+G   D+++ TS++  YS  G  E A K+FDE+P +D+V+WNV+I C +   
Sbjct: 128 EIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVG 187

Query: 210 RTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNL 269
               AL +++ M +   +C  D  T + LL +CA ++AL  G  +H         +   +
Sbjct: 188 LHNQALSMYKRMGNEG-VC-GDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFV 247

Query: 270 CNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGV 329
            N+LI MY++CG ++ A  VF+ M +++V++W++MI G  ++GHG EAI  F +M  +GV
Sbjct: 248 SNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGV 307

Query: 330 EPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAY 389
            P   TF  +L  CSH GLV EG+  F+ M  +F + PNV HYGC+VDL GRAG L+ + 
Sbjct: 308 RPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSL 367

Query: 390 ELIMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAG 449
           E+I +     D  +WRTLLG+C+IH +  LGE  ++ L++L++  AGDYVL+ +IYS+A 
Sbjct: 368 EMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAAN 427

Query: 450 NWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLK 509
           +      +RKL++   + T P  + IE+   VH+F VDD  HP    IY +L E+  +  
Sbjct: 428 DAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAI 487

Query: 510 IAGYEAEMSSE-LHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCH 569
           +AGY+ E S+     L  +  G A ++HSEKLAIA+G++ T  G T+RI  N+R C DCH
Sbjct: 488 LAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCH 547

Query: 570 NFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW 603
           +F KY+S  +NR+++VRDR RFHHF +G CSCND+W
Sbjct: 548 SFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581

[Close]

BLAST of CsGy1G002340 vs. Swiss-Prot
Match: sp|Q9LN01|PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 4.8e-119
Identity = 204/486 (41.98%), Postives = 312/486 (64.20%), Query Frame = 0


Query: 120 RQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNGHQADSLLLTSMMDLYSHCGKPE 179
           +  VR D  +    V +C +  S+  G Q+H  I  +G  ++  ++ +++DLYS CG+ E
Sbjct: 259 KTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELE 318

Query: 180 EACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLF-EIMQSPTYLCQPDKVTCLLLLQ 239
            AC LF+ +P KDV++WN LI   T     ++AL LF E+++S      P+ VT L +L 
Sbjct: 319 TACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE---TPNDVTMLSILP 378

Query: 240 ACADLNALEFGERIHGYIQQH--GYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNV 299
           ACA L A++ G  IH YI +   G    S+L  SLI MY++CG ++ A++VF+ +  K++
Sbjct: 379 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 438

Query: 300 VSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDR 359
            SW+AMI G +M+G    + + F  M+K G++P D TF  +LSACSH G++D G   F  
Sbjct: 439 SSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRT 498

Query: 360 MRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGN 419
           M Q++ + P + HYGC++DLLG +G+  +A E+I  ME+ PD  +W +LL AC++HG+  
Sbjct: 499 MTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVE 558

Query: 420 LGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELN 479
           LGE   E+LI+++ +  G YVLL NIY+SAG W++V + R L+ +KG+   P C++IE++
Sbjct: 559 LGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEID 618

Query: 480 GVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSE 539
            VVH+F + D  HP   +IY  L+E+   L+ AG+  + S  L  +E + K  AL +HSE
Sbjct: 619 SVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSE 678

Query: 540 KLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRC 599
           KLAIAFG+++T PG  + I  N+R C +CH   K IS +Y R+++ RDR+RFHHF++G C
Sbjct: 679 KLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVC 738

Query: 600 SCNDFW 603
           SCND+W
Sbjct: 739 SCNDYW 741

[Close]

BLAST of CsGy1G002340 vs. Swiss-Prot
Match: sp|B8YEK4|OGR1_ORYSJ (Pentatricopeptide repeat-containing protein OGR1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=OGR1 PE=2 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 9.0e-118
Identity = 237/594 (39.90%), Postives = 342/594 (57.58%), Query Frame = 0


Query: 19  SISFSHFEREPLISLIKSCTHKSQLLQIHAHIITTSSV-QDPIVSLRFLTRTASAPF-RD 78
           S+S +    E L+  + S  H    LQ HA ++T+  +   P +  RFL R A +P    
Sbjct: 2   SVSAAARHLESLLPRLASLRH---YLQFHARLLTSGHLGAHPGLRARFLDRLALSPHPAA 61

Query: 79  LGYSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMY--RDMERQGVRADPLSSSFAV 138
           L ++  L   L  P  +  NA LR  + S  P   L +   R +     R D LS SFA+
Sbjct: 62  LPHALLLLRSLPTPATNDLNAALRGLAASPHPARSLLLLAGRLLPALLPRPDALSLSFAL 121

Query: 139 KSCIKLLSLLFGIQIHARIFRNGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVV 198
           K+  +       +Q+HA + R G  AD  LLT+++D Y+ CG    A K+FDE+  +DV 
Sbjct: 122 KASARCSDAHTTVQLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARKVFDEMTVRDVA 181

Query: 199 AWNVLISCLTRNKRTRDALGLFEIM----QSPTYLCQPDKVTCLLLLQACADLNALEFGE 258
            WN L++ L +      AL LF  +    Q      +P++VT +  L ACA +  L+ G 
Sbjct: 182 TWNSLLAGLAQGTEPNLALALFHRLANSFQELPSREEPNEVTIVAALSACAQIGLLKDGM 241

Query: 259 RIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFD--KMTEKNVVSWSAMISGLSM 318
            +H + ++ G +    +CNSLI MYS+CG + +A +VF   K  ++ +VS++A I   SM
Sbjct: 242 YVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDQTLVSYNAAIQAHSM 301

Query: 319 NGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVH 378
           +GHG +A+  F EM    +EP   T+ AVL  C+H GLVD+G+  F+ MR    +APN+ 
Sbjct: 302 HGHGGDALRLFDEMPTR-IEPDGVTYLAVLCGCNHSGLVDDGLRVFNSMR----VAPNMK 361

Query: 379 HYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIEL 438
           HYG IVDLLGRAG L +AY+ ++SM    D  +W+TLLGA ++HG   L E     L EL
Sbjct: 362 HYGTIVDLLGRAGRLTEAYDTVISMPFPADIVLWQTLLGAAKMHGVVELAELAANKLAEL 421

Query: 439 KSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDIS 498
            S   GDYVLL N+Y+S   W  V  +R  M+   +   P  +  E++GV+H+F   D  
Sbjct: 422 GSNVDGDYVLLSNVYASKARWMDVGRVRDTMRSNDVRKVPGFSYTEIDGVMHKFINGDKE 481

Query: 499 HPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLAIAFGVLATP 558
           HP   +IY+ L++I  ++   GYE E S+ LH +  ++K YAL  HSEKLAIAFG++ATP
Sbjct: 482 HPRWQEIYRALEDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATP 541

Query: 559 PGRTIRIANNIRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW 603
           PG T+R+  N+R C DCH  AK IS  Y R +V+RDR+RFH F++G+CSC D+W
Sbjct: 542 PGETLRVIKNLRICGDCHVVAKLISKAYGRVIVIRDRARFHRFEDGQCSCRDYW 587

[Close]

BLAST of CsGy1G002340 vs. TrEMBL
Match: tr|A0A0A0LUH9|A0A0A0LUH9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009750 PE=4 SV=1)

HSP 1 Score: 1233.8 bits (3191), Expect = 0.0e+00
Identity = 599/602 (99.50%), Postives = 600/602 (99.67%), Query Frame = 0


Query: 1   MCVIFRSPSILSLKYRHHSISFSHFEREPLISLIKSCTHKSQLLQIHAHIITTSSVQDPI 60
           MCVIFRSPSILSLKY HHSISFSHFEREPLISLIKSCTHKSQLLQIHAHIITTSS+QDPI
Sbjct: 1   MCVIFRSPSILSLKYHHHSISFSHFEREPLISLIKSCTHKSQLLQIHAHIITTSSIQDPI 60

Query: 61  VSLRFLTRTASAPFRDLGYSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMER 120
           VSLRFLTRTASAPFRDLGYSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMER
Sbjct: 61  VSLRFLTRTASAPFRDLGYSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMER 120

Query: 121 QGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNGHQADSLLLTSMMDLYSHCGKPEE 180
           QGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIF NGHQADSLLLTSMMDLYSHCGKPEE
Sbjct: 121 QGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFINGHQADSLLLTSMMDLYSHCGKPEE 180

Query: 181 ACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQAC 240
           ACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQAC
Sbjct: 181 ACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQAC 240

Query: 241 ADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWS 300
           ADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWS
Sbjct: 241 ADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWS 300

Query: 301 AMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQE 360
           AMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQE
Sbjct: 301 AMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQE 360

Query: 361 FMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGER 420
           FMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGER
Sbjct: 361 FMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGER 420

Query: 421 IVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVH 480
           IVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVH
Sbjct: 421 IVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVH 480

Query: 481 QFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLAI 540
           QFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLAI
Sbjct: 481 QFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLAI 540

Query: 541 AFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCND 600
           AFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCND
Sbjct: 541 AFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCND 600

Query: 601 FW 603
           FW
Sbjct: 601 FW 602

[Close]

BLAST of CsGy1G002340 vs. TrEMBL
Match: tr|A0A1S3BV40|A0A1S3BV40_CUCME (pentatricopeptide repeat-containing protein At3g47530 OS=Cucumis melo OX=3656 GN=LOC103493993 PE=4 SV=1)

HSP 1 Score: 1143.6 bits (2957), Expect = 0.0e+00
Identity = 561/602 (93.19%), Postives = 570/602 (94.68%), Query Frame = 0


Query: 1   MCVIFRSPSILSLKYRHHSISFSHFEREPLISLIKSCTHKSQLLQIHAHIITTSSVQDPI 60
           M VIF  PSILS                 LISLIKSCTHKSQLLQIHAHII TSS+QDPI
Sbjct: 1   MYVIFHRPSILS-----------------LISLIKSCTHKSQLLQIHAHIIRTSSIQDPI 60

Query: 61  VSLRFLTRTASAPFRDLGYSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMER 120
           VSLRFLTRTASAPFRDLGYSRR  DLLTNP VSHYNAMLRAYS+SRSPLEGLY+YRDMER
Sbjct: 61  VSLRFLTRTASAPFRDLGYSRRFLDLLTNPLVSHYNAMLRAYSVSRSPLEGLYVYRDMER 120

Query: 121 QGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNGHQADSLLLTSMMDLYSHCGKPEE 180
           QGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIF  GHQADSLLLTSMMDLYSHCGKPEE
Sbjct: 121 QGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFIYGHQADSLLLTSMMDLYSHCGKPEE 180

Query: 181 ACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQAC 240
           ACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQAC
Sbjct: 181 ACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQAC 240

Query: 241 ADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWS 300
           ADLNALEFGERIHGYIQQH YNTESNLCNSLISMYSRCGR+DKAYEVFDKM EKNVVSWS
Sbjct: 241 ADLNALEFGERIHGYIQQHCYNTESNLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWS 300

Query: 301 AMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQE 360
           AMISGLSMNGHGREAIEAFWEMQKNGVEP DHTFTAVLSACSHCGLVDEGMAFFDRMRQE
Sbjct: 301 AMISGLSMNGHGREAIEAFWEMQKNGVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQE 360

Query: 361 FMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGER 420
            MIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGH NLGER
Sbjct: 361 LMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHANLGER 420

Query: 421 IVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVH 480
           IVEHLIELKSQEAGDYVLLLNIYSSAG WDKVTELRKLMKEKGIYTTPCCTTIELNGVVH
Sbjct: 421 IVEHLIELKSQEAGDYVLLLNIYSSAGKWDKVTELRKLMKEKGIYTTPCCTTIELNGVVH 480

Query: 481 QFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLAI 540
           +FAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRL+P+DKGYALSNHSEKLAI
Sbjct: 481 EFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLKPEDKGYALSNHSEKLAI 540

Query: 541 AFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCND 600
           AFGVLATPPGRTIR+ANNIRTCMDCHNFAKYISSVYNRKVV+RDRSRFHHFQEGRCSCND
Sbjct: 541 AFGVLATPPGRTIRVANNIRTCMDCHNFAKYISSVYNRKVVLRDRSRFHHFQEGRCSCND 585

Query: 601 FW 603
           FW
Sbjct: 601 FW 585

[Close]

BLAST of CsGy1G002340 vs. TrEMBL
Match: tr|A0A2I4G1Y4|A0A2I4G1Y4_9ROSI (pentatricopeptide repeat-containing protein At3g47530 OS=Juglans regia OX=51240 GN=LOC109004001 PE=4 SV=1)

HSP 1 Score: 876.7 bits (2264), Expect = 3.0e-251
Identity = 412/577 (71.40%), Postives = 484/577 (83.88%), Query Frame = 0


Query: 26  EREPLISLIKSCTHKSQLLQIHAHIITTSSVQDPIVSLRFLTRTASAPFRDLGYSRRLFD 85
           ER  L SLIKSCT K+ LLQIHAH++ T  +QDP +SL FL+R A +P RD+ YSR+ F 
Sbjct: 30  ERRQLPSLIKSCTQKTHLLQIHAHLVCTGLLQDPTISLIFLSRLALSPARDVDYSRQFFT 89

Query: 86  LLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLF 145
            +++P   HYN M+RAYS+S SPLEG YMYR+M+RQ VR +PLSSSFA+KSCIKL SLL 
Sbjct: 90  QISDPLTFHYNTMIRAYSMSNSPLEGFYMYREMKRQSVRVNPLSSSFAIKSCIKLSSLLG 149

Query: 146 GIQIHARIFRNGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTR 205
           G+Q+HARI  +GHQ+DSLLLT++MDLYS C + +EACK+FD++  +D VAWNVLISC  R
Sbjct: 150 GVQVHARILTDGHQSDSLLLTNLMDLYSCCERCDEACKVFDDIRDRDTVAWNVLISCCMR 209

Query: 206 NKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTES 265
           N RTRDA+GLF+IMQS +  C+PD VTCLLLLQACA LNALEFGE+IH YI QHGY T  
Sbjct: 210 NNRTRDAMGLFDIMQSGSDGCEPDDVTCLLLLQACAHLNALEFGEKIHAYIGQHGYGTAG 269

Query: 266 NLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKN 325
            LCNSLI+MYSRCG ++KAY VF  M  KNVVSWSAMISGL+MNGHGREAIEAFWEMQK 
Sbjct: 270 KLCNSLIAMYSRCGCLEKAYGVFKGMRNKNVVSWSAMISGLAMNGHGREAIEAFWEMQKL 329

Query: 326 GVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQ 385
           G+ P D TFT VLSACSHCGLVDEGM FFD M +EF IAPN  HYGC+VDLLGRAG+LDQ
Sbjct: 330 GIPPDDQTFTGVLSACSHCGLVDEGMMFFDLMSKEFGIAPNTRHYGCVVDLLGRAGLLDQ 389

Query: 386 AYELIMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSS 445
           AY+LI+SM V+PD+TMWRTLLGACRIHGH  LGER+V HLIELK+QEAGDY LLLNIYSS
Sbjct: 390 AYQLILSMSVKPDSTMWRTLLGACRIHGHVTLGERVVGHLIELKAQEAGDYALLLNIYSS 449

Query: 446 AGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQ 505
           AG WDKV E+RK M+EK I TTP C+TI L GVVH+F VDD+SHP K +IY+ L+EIN+Q
Sbjct: 450 AGKWDKVMEVRKFMQEKAIQTTPGCSTIVLKGVVHEFVVDDVSHPRKGEIYEMLNEINQQ 509

Query: 506 LKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDC 565
           LKIAGY AE+S+ELH L  ++KG ALS HSEKLAIAFGVL+TPPG TIR+A N+RTC+DC
Sbjct: 510 LKIAGYVAEVSAELHNLGAEEKGDALSYHSEKLAIAFGVLSTPPGTTIRVAKNLRTCIDC 569

Query: 566 HNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW 603
           HNFAK +S VYNR+V+VRDR+RFHHF+EGRCSCND+W
Sbjct: 570 HNFAKVLSGVYNREVIVRDRTRFHHFKEGRCSCNDYW 606

[Close]

BLAST of CsGy1G002340 vs. TrEMBL
Match: tr|A0A251PAT0|A0A251PAT0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G194000 PE=4 SV=1)

HSP 1 Score: 857.4 bits (2214), Expect = 1.9e-245
Identity = 400/603 (66.33%), Postives = 490/603 (81.26%), Query Frame = 0


Query: 9   SILSLKYRHH---------SISFSHFEREPLISLIKSCTHKSQLLQIHAHIITTSSVQDP 68
           S LS    HH         +IS +   ++ L+ LIKSCT +S LLQIHAHI+ TS V +P
Sbjct: 11  SSLSSSQSHHPNVPVCFTTNISHTQTPKQSLLDLIKSCTRRSHLLQIHAHIVRTSLVLEP 70

Query: 69  IVSLRFLTRTASAPFRDLGYSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDME 128
            + L+FL+    +P + + YSRR FD +  P    YN M+RAYS+S SP EG  MYRD+ 
Sbjct: 71  TICLQFLSLVGLSPLKSISYSRRFFDQIAKPTAFQYNTMVRAYSISDSPEEGFSMYRDLL 130

Query: 129 RQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNGHQADSLLLTSMMDLYSHCGKPE 188
           R+G+RAD L+SSF +KSCI++ SLL GIQ+HARI R GH++DS LLT++MDLYS CGK +
Sbjct: 131 RRGLRADALASSFVIKSCIRVSSLLGGIQVHARILRGGHESDSRLLTTLMDLYSICGKCD 190

Query: 189 EACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQA 248
           EACKLFDE+P++DVVAWNVLISC   N RTRDA+ LF+IM+S T+ C+PD+VTCLL+LQA
Sbjct: 191 EACKLFDEMPKRDVVAWNVLISCCLHNNRTRDAVSLFDIMRSETHRCEPDEVTCLLMLQA 250

Query: 249 CADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSW 308
           C++LNALEFGER+H YI++HGY+  SNLCNSLI+MYSRCG +DKAYEVF  M +KNVVSW
Sbjct: 251 CSNLNALEFGERVHKYIEEHGYDGASNLCNSLIAMYSRCGCLDKAYEVFKGMKDKNVVSW 310

Query: 309 SAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQ 368
           SAMISGL++NG+GREAIEAF EMQK GV P D TFT VL ACSHCGLVDEGM FFDRM +
Sbjct: 311 SAMISGLAVNGYGREAIEAFGEMQKMGVLPDDQTFTGVLCACSHCGLVDEGMVFFDRMSK 370

Query: 369 EFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGE 428
           +F + PN+HHYGC+VDLLGRAG LDQAY+LI+SM+++PD+T+WRTLLG CRIHGH  L E
Sbjct: 371 DFGVVPNIHHYGCMVDLLGRAGRLDQAYQLILSMDIKPDSTIWRTLLGGCRIHGHDALAE 430

Query: 429 RIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVV 488
            ++ HLIELK+QEAGDYVLL+NIYSSAGNW+K+TE+RK MKEK I TTP C+TIEL GV 
Sbjct: 431 SVIGHLIELKAQEAGDYVLLMNIYSSAGNWEKLTEVRKFMKEKAIQTTPGCSTIELKGVA 490

Query: 489 HQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLA 548
           H+F VDD+SHP KD+IY  LDEIN QLKIAGY A++SSELH L  ++KG+ALS HSEKLA
Sbjct: 491 HEFVVDDVSHPRKDEIYNMLDEINSQLKIAGYVADVSSELHNLGTEEKGHALSYHSEKLA 550

Query: 549 IAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCN 603
           IAFGVLATPPG  IR+A N+R C+DCHNFA  +S VYNR+V++RDR+RFHHF+EGRCSCN
Sbjct: 551 IAFGVLATPPGTPIRVAKNLRICVDCHNFAMVLSGVYNREVIIRDRTRFHHFREGRCSCN 610

[Close]

BLAST of CsGy1G002340 vs. TrEMBL
Match: tr|A0A067K583|A0A067K583_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_11633 PE=4 SV=1)

HSP 1 Score: 846.7 bits (2186), Expect = 3.3e-242
Identity = 391/573 (68.24%), Postives = 476/573 (83.07%), Query Frame = 0


Query: 30  LISLIKSCTHKSQLLQIHAHIITTSSVQDPIVSLRFLTRTASAPFRDLGYSRRLFDLLTN 89
           LISLIKSCT KS LLQIHA +I T   Q P +S  FL+R A +PF+D+ YSR++F    N
Sbjct: 31  LISLIKSCTQKSHLLQIHAQLIRTFLFQKPTISFPFLSRVALSPFQDVSYSRQIFSQTPN 90

Query: 90  PFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQI 149
           P V HYN M+R YS S SP+EG YMY+ M ++G+RADP+S SFAVK  +K+ SL+ G+Q+
Sbjct: 91  PSVFHYNTMIRVYSSSNSPIEGFYMYQQMRKRGLRADPISLSFAVKCFVKVCSLVGGVQV 150

Query: 150 HARIFRNGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRT 209
           HARI R+GHQ+DSLLLT++MDLYS C K  EA K+FD++PQ+D VAWNVLISC  RN RT
Sbjct: 151 HARILRDGHQSDSLLLTNLMDLYSICQKGNEAYKVFDDIPQRDTVAWNVLISCYIRNHRT 210

Query: 210 RDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCN 269
           +D LG+F+ + S  + C+PD VTCLLLLQAC++L ALEFGE++HGY+++HGY    NLCN
Sbjct: 211 KDVLGVFDHLASGDFGCEPDDVTCLLLLQACSNLGALEFGEKVHGYVEEHGYGDAMNLCN 270

Query: 270 SLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEP 329
           SLI+MYSRCG +DKAY VF +M +KNVV+WSAMISG +MNGHGREAI+AF EMQ+ G+ P
Sbjct: 271 SLIAMYSRCGCLDKAYNVFKRMPKKNVVTWSAMISGFAMNGHGREAIQAFEEMQRIGILP 330

Query: 330 GDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYEL 389
            D TFT VLSACSHCGLVDEGM FF+RM +EF IAPNVHHYGCIVDLLGRA  LD+AY+L
Sbjct: 331 DDQTFTGVLSACSHCGLVDEGMLFFERMNREFGIAPNVHHYGCIVDLLGRASQLDRAYQL 390

Query: 390 IMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNW 449
           IMSM+V+PD+T+WRTLLGACRIH H  L ER+V HLIELK+QEAGDY+LLLNIYSS GNW
Sbjct: 391 IMSMKVKPDSTIWRTLLGACRIHRHVMLAERVVGHLIELKAQEAGDYILLLNIYSSVGNW 450

Query: 450 DKVTELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIA 509
           +KVTELR+ MKEKGI TTP C++IELNG VH+F VDD+SHP KD+IY+ LDEIN QLKIA
Sbjct: 451 EKVTELRRFMKEKGIQTTPGCSSIELNGQVHEFVVDDVSHPRKDEIYEMLDEINTQLKIA 510

Query: 510 GYEAEMSSELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFA 569
           GY  E++SELH L  ++K Y LS HSEKLAIAFG+L+TPPG TIR+A N+RTC+DCHNFA
Sbjct: 511 GYVVEITSELHNLGAEEKQYVLSYHSEKLAIAFGILSTPPGTTIRVAKNLRTCVDCHNFA 570

Query: 570 KYISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW 603
           K++S VYNR+V +RDR+RFHHF+EG CSCND+W
Sbjct: 571 KFVSGVYNRQVNIRDRTRFHHFREGSCSCNDYW 603

The following BLAST results are available for this feature:

BLAST of CsGy1G002340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011660092.1	0.0e+00	99.50	PREDICTED: pentatricopeptide repeat-containing protein At3g47530 [Cucumis sativu...	[more]
XP_008453206.1	0.0e+00	93.19	PREDICTED: pentatricopeptide repeat-containing protein At3g47530 [Cucumis melo]	[more]
XP_023515406.1	0.0e+00	88.33	pentatricopeptide repeat-containing protein At3g47530 [Cucurbita pepo subsp. pep...	[more]
XP_022921651.1	0.0e+00	88.00	pentatricopeptide repeat-containing protein At3g47530 [Cucurbita moschata]	[more]
XP_022987181.1	0.0e+00	87.50	pentatricopeptide repeat-containing protein At3g47530 [Cucurbita maxima]	[more]

BLAST of CsGy1G002340 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G47530.1	1.5e-211	61.94	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G46790.1	1.3e-122	37.93	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G56550.1	2.2e-122	38.72	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G08070.1	2.6e-120	41.98	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G34160.1	4.2e-118	37.63	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of CsGy1G002340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SN85\|PP267_ARATH	2.6e-210	61.94	Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9STF3\|PP265_ARATH	2.3e-121	37.93	Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop...	[more]
sp\|Q9LXY5\|PP284_ARATH	3.9e-121	38.72	Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9LN01\|PPR21_ARATH	4.8e-119	41.98	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
sp\|B8YEK4\|OGR1_ORYSJ	9.0e-118	39.90	Pentatricopeptide repeat-containing protein OGR1, mitochondrial OS=Oryza sativa ...	[more]

BLAST of CsGy1G002340 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LUH9\|A0A0A0LUH9_CUCSA	0.0e+00	99.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009750 PE=4 SV=1	[more]
tr\|A0A1S3BV40\|A0A1S3BV40_CUCME	0.0e+00	93.19	pentatricopeptide repeat-containing protein At3g47530 OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A2I4G1Y4\|A0A2I4G1Y4_9ROSI	3.0e-251	71.40	pentatricopeptide repeat-containing protein At3g47530 OS=Juglans regia OX=51240 ...	[more]
tr\|A0A251PAT0\|A0A251PAT0_PRUPE	1.9e-245	66.33	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G194000 PE=4 SV=1	[more]
tr\|A0A067K583\|A0A067K583_JATCU	3.3e-242	68.24	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_11633 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat
IPR032867	DYW_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G002340.1	CsGy1G002340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 469..592 e-value: 3.4E-34 score: 117.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 191..241 e-value: 2.2E-8 score: 34.0 coord: 294..342 e-value: 4.8E-13 score: 49.0
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 269..292 e-value: 4.1E-6 score: 26.3
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 95..126 e-value: 1.8E-5 score: 22.6 coord: 194..221 e-value: 9.3E-5 score: 20.4 coord: 267..296 e-value: 4.1E-7 score: 27.8 coord: 436..465 e-value: 0.0025 score: 15.9 coord: 332..360 e-value: 2.1E-4 score: 19.3 coord: 297..330 e-value: 1.0E-5 score: 23.4 coord: 166..193 e-value: 0.0026 score: 15.8
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 94..123 e-value: 0.0025 score: 17.8 coord: 436..464 e-value: 0.0019 score: 18.2 coord: 369..394 e-value: 0.17 score: 12.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 161..195 score: 9.668
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 229..263 score: 6.467
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 264..294 score: 10.326
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 398..428 score: 5.338
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 366..396 score: 7.783
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 330..360 score: 8.802
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 432..466 score: 8.32
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 91..125 score: 8.802
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 295..329 score: 12.047
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 196..226 score: 5.831
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 93..243 e-value: 2.2E-25 score: 91.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 361..536 e-value: 1.7E-16 score: 62.7 coord: 244..360 e-value: 7.1E-31 score: 109.9
None	No IPR available	PANTHER	PTHR24015:SF1054	SUBFAMILY NOT NAMED	coord: 58..519
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 58..519

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G002340	Cla019111	Watermelon (97103) v1	cgybwmB094
CsGy1G002340	Csa1G009750	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G002340	ClCG06G016200	Watermelon (Charleston Gray)	cgybwcgB078
CsGy1G002340	CSPI01G02290	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G002340	CmaCh10G001910	Cucurbita maxima (Rimu)	cgybcmaB004
CsGy1G002340	CmoCh10G002080	Cucurbita moschata (Rifu)	cgybcmoB005
CsGy1G002340	Lsi06G014630	Bottle gourd (USVL1VR-Ls)	cgyblsiB067
CsGy1G002340	Cp4.1LG18g08010	Cucurbita pepo (Zucchini)	cgybcpeB053
CsGy1G002340	CsaV3_1G002340	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G002340	Cla97C06G125770	Watermelon (97103) v2	cgybwmbB076
CsGy1G002340	Bhi02G000224	Wax gourd	cgybwgoB092
CsGy1G002340	Carg17962	Silver-seed gourd	carcgybB0470

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G002340	Cucumber (Chinese Long) v3	cgybcucB004
CsGy1G002340	Cucumber (Chinese Long) v3	cgybcucB039
CsGy1G002340	Watermelon (97103) v2	cgybwmbB054
CsGy1G002340	Watermelon (97103) v2	cgybwmbB058
CsGy1G002340	Watermelon (97103) v2	cgybwmbB088
CsGy1G002340	Wax gourd	cgybwgoB009
CsGy1G002340	Wax gourd	cgybwgoB050
CsGy1G002340	Wax gourd	cgybwgoB067
CsGy1G002340	Melon (DHL92) v3.6.1	cgybmedB043
CsGy1G002340	Cucumber (Gy14) v2	cgybcgybB002
CsGy1G002340	Cucumber (Gy14) v2	cgybcgybB029
CsGy1G002340	Cucurbita maxima (Rimu)	cgybcmaB040
CsGy1G002340	Cucurbita maxima (Rimu)	cgybcmaB103
CsGy1G002340	Cucurbita maxima (Rimu)	cgybcmaB106
CsGy1G002340	Cucurbita maxima (Rimu)	cgybcmaB130
CsGy1G002340	Cucurbita moschata (Rifu)	cgybcmoB028
CsGy1G002340	Cucurbita moschata (Rifu)	cgybcmoB100
CsGy1G002340	Cucurbita moschata (Rifu)	cgybcmoB119
CsGy1G002340	Cucurbita pepo (Zucchini)	cgybcpeB014
CsGy1G002340	Cucurbita pepo (Zucchini)	cgybcpeB061
CsGy1G002340	Cucurbita pepo (Zucchini)	cgybcpeB101
CsGy1G002340	Cucurbita pepo (Zucchini)	cgybcpeB108
CsGy1G002340	Cucurbita pepo (Zucchini)	cgybcpeB126
CsGy1G002340	Cucumber (Chinese Long) v2	cgybcuB004
CsGy1G002340	Bottle gourd (USVL1VR-Ls)	cgyblsiB021
CsGy1G002340	Bottle gourd (USVL1VR-Ls)	cgyblsiB040
CsGy1G002340	Melon (DHL92) v3.5.1	cgybmeB007
CsGy1G002340	Melon (DHL92) v3.5.1	cgybmeB024
CsGy1G002340	Melon (DHL92) v3.5.1	cgybmeB048
CsGy1G002340	Melon (DHL92) v3.6.1	cgybmedB005
CsGy1G002340	Melon (DHL92) v3.6.1	cgybmedB024
CsGy1G002340	Watermelon (Charleston Gray)	cgybwcgB003
CsGy1G002340	Watermelon (Charleston Gray)	cgybwcgB054
CsGy1G002340	Watermelon (Charleston Gray)	cgybwcgB060
CsGy1G002340	Watermelon (97103) v1	cgybwmB004
CsGy1G002340	Watermelon (97103) v1	cgybwmB065
CsGy1G002340	Wild cucumber (PI 183967)	cgybcpiB003
CsGy1G002340	Wild cucumber (PI 183967)	cgybcpiB031
CsGy1G002340	Silver-seed gourd	carcgybB0053
CsGy1G002340	Silver-seed gourd	carcgybB0611