CsGy1G002280 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G002280
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Description60S ribosomal protein L34
LocationChr1 : 1442906 .. 1444987 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGTCTCTGCAGCAGCCTCCACTCCCAGAGCAGCGAAGAAGAGAGGAAGAATCATGGTTCAGCGTCTTACATACCGCAAGCGCCATAGCTATGCTACCAAGTCTAACCAGCATCGTGTCGTGAAAACCCCTGGTAAACTCTCGGATTCCTTCTCATAGCTATTCTATCAAGTCTCTTTGAACTTCAATGTCAATCAATCGGATTTCGTATTTATTGATTCTGTTCTAATCATTTTCTTCTATTTTGTGTTTAGGTGGGAAGCTTGTGTATCAGACTACCAAGAAAAGAGCTAGTGGACCCAAATGTCCGGTTACCGGCAAAAGGATTCAGGGGGTATGTATTCGATCATTCTTATCTCCCTCTTTTATGACTTAAACTTGTTTATGTTTTGATTTATTTATGATGGTTATGTTATCTCTTTGTAGTCTACATCTTTGTGCTAAATACCTTTAAAACCTATTTTGTTGATAAGGAAGGATTAAATAAAAACTGTGATAGTTTATTCTAGTTGCCGCATTTGTGTTGCATTAGGGAAAAAATTGGTCTCCCAGTACTGAAATTTTGGATTTTGGTTCTTTATGATCGGCACATTACCTGTTACTGAATGGCAGACTTTACATGCTGAAGTGCTCTCATAATCAGAACCAGAATATACTGTTCTATACTTTTGTTTAGGTATCGTATTTTTTAACAGAAGGGTAATTTGTATTACTTCTCTATAATTGTGGTAAGGATTCTTTACTGACCTAAACATGATTCCGAATGTTGGACTCCTCATTCTTTTAAACTGAATCCTAATGGTACTCATGCAGAATATCCTTTCGTTTTATATGTTAAGATATAATAGCTGAATTATCTTAGGTCTGTTCTCAAGAAGGTGTTAATAATTGTTCGGTTTTCAATTTTGGAAATACGTATATGGGTTTAGTATAGATAGACATGTTGTGTGCGTATCTCTTTGCACCACACCAACGTGTCTATCTATACTAAATCCATTAATTGTAGATTGGTTGATTCATGAATGTAAAATTTTGCATCATTACCTGCACTATTTATATGTTGGTAGACACACTTGCATTTACATTTGGTACTTTAGTTGATTTTGAACTATATGATAGATAGCCTTGTAAAGTTAAGAATGGTTTTCAGAAATTGGGTATTTTGTAATTTAGTTCATTTGCGTTCCAACCTTTGGTTAAGATGGCTCAATCTTGATTATGTTAAGTTAATCTGTGTAAGTTTATGATTATTGTAGATTCCTCACTTGAGGCCAGCTGAATATAAGAGGTCTAGATTAGCTAGGAACCGCAGGACTGTGAATCGTGCATACGGTGGCGTTTTATCTGGCAGTGCTGTGAGGGAGAGGTTGGCTTTCCATTATTTCTCATCATCTGTTTGATTGTGTTTATGATAGTAAAAGGTATTGTGCTAATCTTTATTTGGTTTGGGATAGGATCATCCGGGCCTTCTTGGTGGAAGAGCAGAAGATTGTCAAGAAGGTATTGAAGATTCAGAAGGCTAAGGAAAAACTGGCATCAAAGAGCTAAATTGATTATGTTTGTGGTTTTGTTTTTAGAAAATCGATGAAATTTTGACGTTTTTGTGATGTGATGCTGAATTTTAGCGATTACTATTTAAAGTTTGTTTTTGGAAGAACGATGTAGAAGATGTCAAAGTATTTGACTGTTTTTAGCATTTGAGTTAATTGAAGATTTAATTGAAGACAACATGTGGTATATAAGCTTTGATTTAATATTGAATTAAGAAAGTCAGTTGAGAAGCATAAGCAGTAAGCAACTTAAGAATCTATATCTTCATGCTCATTATTTTAAAATTATTTTTCATGAGGGAATTTCTTTGTTCCAACTTCAAACATAGAGAGCTTACTTTGATTTTCTTTTCTTTACTTTTTGAAAAATTATCCTATAACTAATGGTTTATTTTCAAACACAAATCTAACTTTATGAAGTTTGATTTTAGACTAACACATGTATTTGTTGTAAATAATGCCTTTTTTTTTTTTAATGTTTTCTCTTCTCTTCCTCCCTCCTTTGATTGCCAGTAGATGGACATAAGAATAAC

mRNA sequence

AAGTCTCTGCAGCAGCCTCCACTCCCAGAGCAGCGAAGAAGAGAGGAAGAATCATGGTTCAGCGTCTTACATACCGCAAGCGCCATAGCTATGCTACCAAGTCTAACCAGCATCGTGTCGTGAAAACCCCTGGTGGGAAGCTTGTGTATCAGACTACCAAGAAAAGAGCTAGTGGACCCAAATGTCCGGTTACCGGCAAAAGGATTCAGGGGATTCCTCACTTGAGGCCAGCTGAATATAAGAGGTCTAGATTAGCTAGGAACCGCAGGACTGTGAATCGTGCATACGGTGGCGTTTTATCTGGCAGTGCTGTGAGGGAGAGGATCATCCGGGCCTTCTTGGTGGAAGAGCAGAAGATTGTCAAGAAGGTATTGAAGATTCAGAAGGCTAAGGAAAAACTGGCATCAAAGAGCTAAATTGATTATGTTTGTGGTTTTGTTTTTAGAAAATCGATGAAATTTTGACGTTTTTGTGATGTGATGCTGAATTTTAGCGATTACTATTTAAAGTTTGTTTTTGGAAGAACGATGTAGAAGATGTCAAAGTATTTGACTGTTTTTAGCATTTGAGTTAATTGAAGATTTAATTGAAGACAACATGTGGTATATAAGCTTTGATTTAATATTGAATTAAGAAAGTCAGTTGAGAAGCATAAGCAGTAAGCAACTTAAGAATCTATATCTTCATGCTCATTATTTTAAAATTATTTTTCATGAGGGAATTTCTTTGTTCCAACTTCAAACATAGAGAGCTTACTTTGATTTTCTTTTCTTTACTTTTTGAAAAATTATCCTATAACTAATGGTTTATTTTCAAACACAAATCTAACTTTATGAAGTTTGATTTTAGACTAACACATGTATTTGTTGTAAATAATGCCTTTTTTTTTTTTAATGTTTTCTCTTCTCTTCCTCCCTCCTTTGATTGCCAGTAGATGGACATAAGAATAAC

Coding sequence (CDS)

ATGGTTCAGCGTCTTACATACCGCAAGCGCCATAGCTATGCTACCAAGTCTAACCAGCATCGTGTCGTGAAAACCCCTGGTGGGAAGCTTGTGTATCAGACTACCAAGAAAAGAGCTAGTGGACCCAAATGTCCGGTTACCGGCAAAAGGATTCAGGGGATTCCTCACTTGAGGCCAGCTGAATATAAGAGGTCTAGATTAGCTAGGAACCGCAGGACTGTGAATCGTGCATACGGTGGCGTTTTATCTGGCAGTGCTGTGAGGGAGAGGATCATCCGGGCCTTCTTGGTGGAAGAGCAGAAGATTGTCAAGAAGGTATTGAAGATTCAGAAGGCTAAGGAAAAACTGGCATCAAAGAGCTAA

Protein sequence

MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Homology
[Close]
BLAST of CsGy1G002280 vs. NCBI nr
Match: XP_004147322.1 (PREDICTED: 60S ribosomal protein L34 [Cucumis sativus] >XP_008453201.1 PREDICTED: 60S ribosomal protein L34 [Cucumis melo] >XP_008453217.1 PREDICTED: 60S ribosomal protein L34 [Cucumis melo] >XP_008460833.1 PREDICTED: 60S ribosomal protein L34 [Cucumis melo] >KGN62245.1 hypothetical protein Csa_2G338890 [Cucumis sativus])

HSP 1 Score: 226.9 bits (577), Expect = 3.7e-56
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of CsGy1G002280 vs. NCBI nr
Match: XP_004138165.2 (PREDICTED: 60S ribosomal protein L34-like [Cucumis sativus] >KGN63665.1 hypothetical protein Csa_1G009690 [Cucumis sativus])

HSP 1 Score: 225.7 bits (574), Expect = 8.3e-56
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARNRRTVNRAYGGV+SGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVVSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of CsGy1G002280 vs. NCBI nr
Match: XP_022152880.1 (60S ribosomal protein L34 [Momordica charantia] >XP_022933946.1 60S ribosomal protein L34-like [Cucurbita moschata] >XP_022933947.1 60S ribosomal protein L34-like [Cucurbita moschata] >XP_022964734.1 60S ribosomal protein L34-like [Cucurbita moschata] >XP_022964735.1 60S ribosomal protein L34-like [Cucurbita moschata] >XP_022922091.1 60S ribosomal protein L34-like [Cucurbita moschata] >XP_022973066.1 60S ribosomal protein L34-like [Cucurbita maxima] >XP_022973072.1 60S ribosomal protein L34-like [Cucurbita maxima] >XP_022969674.1 60S ribosomal protein L34-like [Cucurbita maxima] >XP_022970352.1 60S ribosomal protein L34-like [Cucurbita maxima] >XP_023520847.1 60S ribosomal protein L34-like [Cucurbita pepo subsp. pepo] >XP_023529309.1 60S ribosomal protein L34-like [Cucurbita pepo subsp. pepo] >XP_023529311.1 60S ribosomal protein L34-like [Cucurbita pepo subsp. pepo] >XP_023515397.1 60S ribosomal protein L34-like [Cucurbita pepo subsp. pepo] >XP_023519212.1 60S ribosomal protein L34-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 225.3 bits (573), Expect = 1.1e-55
Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of CsGy1G002280 vs. NCBI nr
Match: XP_022134504.1 (60S ribosomal protein L34-like [Momordica charantia])

HSP 1 Score: 224.6 bits (571), Expect = 1.9e-55
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARNRRTVNR YGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of CsGy1G002280 vs. NCBI nr
Match: XP_004232223.1 (60S ribosomal protein L34 [Solanum lycopersicum] >XP_015067147.1 PREDICTED: 60S ribosomal protein L34-like isoform X1 [Solanum pennellii])

HSP 1 Score: 224.2 bits (570), Expect = 2.4e-55
Identity = 117/120 (97.50%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHR+VKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRIVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLPRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of CsGy1G002280 vs. TAIR10
Match: AT1G26880.1 (Ribosomal protein L34e superfamily protein)

HSP 1 Score: 215.3 bits (547), Expect = 2.0e-56
Identity = 111/120 (92.50%), Postives = 117/120 (97.50%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPKA 120

[Close]
BLAST of CsGy1G002280 vs. TAIR10
Match: AT1G69620.1 (ribosomal protein L34)

HSP 1 Score: 213.0 bits (541), Expect = 1.0e-55
Identity = 110/119 (92.44%), Postives = 114/119 (95.80%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASK 120
           EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPK 119

[Close]
BLAST of CsGy1G002280 vs. TAIR10
Match: AT3G28900.1 (Ribosomal protein L34e superfamily protein)

HSP 1 Score: 209.9 bits (533), Expect = 8.6e-55
Identity = 109/120 (90.83%), Postives = 112/120 (93.33%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQKIVKKVLK+QKAKEK A KS
Sbjct: 61  EYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAFLVEEQKIVKKVLKLQKAKEKTAPKS 120

[Close]
BLAST of CsGy1G002280 vs. Swiss-Prot
Match: sp|P41098|RL34_TOBAC (60S ribosomal protein L34 OS=Nicotiana tabacum OX=4097 GN=RPL34 PE=2 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 6.7e-57
Identity = 115/120 (95.83%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA+KS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120

[Close]
BLAST of CsGy1G002280 vs. Swiss-Prot
Match: sp|Q42351|RL341_ARATH (60S ribosomal protein L34-1 OS=Arabidopsis thaliana OX=3702 GN=RPL34A PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 3.7e-55
Identity = 111/120 (92.50%), Postives = 117/120 (97.50%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPKA 120

[Close]
BLAST of CsGy1G002280 vs. Swiss-Prot
Match: sp|P40590|RL34_PEA (60S ribosomal protein L34 OS=Pisum sativum OX=3888 GN=RPL34 PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 3.7e-55
Identity = 112/120 (93.33%), Postives = 116/120 (96.67%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYR+RHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLKIQK KEK A+K+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQAAKN 120

[Close]
BLAST of CsGy1G002280 vs. Swiss-Prot
Match: sp|Q9FE65|RL342_ARATH (60S ribosomal protein L34-2 OS=Arabidopsis thaliana OX=3702 GN=RPL34B PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 1.8e-54
Identity = 110/119 (92.44%), Postives = 114/119 (95.80%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASK 120
           EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPK 119

[Close]
BLAST of CsGy1G002280 vs. Swiss-Prot
Match: sp|Q9LJW6|RL343_ARATH (60S ribosomal protein L34-3 OS=Arabidopsis thaliana OX=3702 GN=RPL34C PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.5e-53
Identity = 109/120 (90.83%), Postives = 112/120 (93.33%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQKIVKKVLK+QKAKEK A KS
Sbjct: 61  EYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAFLVEEQKIVKKVLKLQKAKEKTAPKS 120

[Close]
BLAST of CsGy1G002280 vs. TrEMBL
Match: tr|A0A1S3BV34|A0A1S3BV34_CUCME (60S ribosomal protein L34 OS=Cucumis melo OX=3656 GN=LOC103493989 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.5e-56
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of CsGy1G002280 vs. TrEMBL
Match: tr|A0A0A0LK03|A0A0A0LK03_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G338890 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.5e-56
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of CsGy1G002280 vs. TrEMBL
Match: tr|A0A0A0LP37|A0A0A0LP37_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009690 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 5.5e-56
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARNRRTVNRAYGGV+SGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVVSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of CsGy1G002280 vs. TrEMBL
Match: tr|A0A059D9F6|A0A059D9F6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03442 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.6e-55
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of CsGy1G002280 vs. TrEMBL
Match: tr|A0A068TVQ9|A0A068TVQ9_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00032233001 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.6e-55
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           M QRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA+KS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120

The following BLAST results are available for this feature:
BLAST of CsGy1G002280 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004147322.13.7e-56100.00PREDICTED: 60S ribosomal protein L34 [Cucumis sativus] >XP_008453201.1 PREDICTED... [more]
XP_004138165.28.3e-5699.17PREDICTED: 60S ribosomal protein L34-like [Cucumis sativus] >KGN63665.1 hypothet... [more]
XP_022152880.11.1e-5599.1760S ribosomal protein L34 [Momordica charantia] >XP_022933946.1 60S ribosomal pr... [more]
XP_022134504.11.9e-5598.3360S ribosomal protein L34-like [Momordica charantia][more]
XP_004232223.12.4e-5597.5060S ribosomal protein L34 [Solanum lycopersicum] >XP_015067147.1 PREDICTED: 60S ... [more]
BLAST of CsGy1G002280 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G26880.12.0e-5692.50Ribosomal protein L34e superfamily protein[more]
AT1G69620.11.0e-5592.44ribosomal protein L34[more]
AT3G28900.18.6e-5590.83Ribosomal protein L34e superfamily protein[more]
BLAST of CsGy1G002280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P41098|RL34_TOBAC6.7e-5795.8360S ribosomal protein L34 OS=Nicotiana tabacum OX=4097 GN=RPL34 PE=2 SV=1[more]
sp|Q42351|RL341_ARATH3.7e-5592.5060S ribosomal protein L34-1 OS=Arabidopsis thaliana OX=3702 GN=RPL34A PE=2 SV=1[more]
sp|P40590|RL34_PEA3.7e-5593.3360S ribosomal protein L34 OS=Pisum sativum OX=3888 GN=RPL34 PE=2 SV=1[more]
sp|Q9FE65|RL342_ARATH1.8e-5492.4460S ribosomal protein L34-2 OS=Arabidopsis thaliana OX=3702 GN=RPL34B PE=3 SV=1[more]
sp|Q9LJW6|RL343_ARATH1.5e-5390.8360S ribosomal protein L34-3 OS=Arabidopsis thaliana OX=3702 GN=RPL34C PE=2 SV=1[more]
BLAST of CsGy1G002280 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BV34|A0A1S3BV34_CUCME2.5e-56100.0060S ribosomal protein L34 OS=Cucumis melo OX=3656 GN=LOC103493989 PE=4 SV=1[more]
tr|A0A0A0LK03|A0A0A0LK03_CUCSA2.5e-56100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G338890 PE=4 SV=1[more]
tr|A0A0A0LP37|A0A0A0LP37_CUCSA5.5e-5699.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009690 PE=4 SV=1[more]
tr|A0A059D9F6|A0A059D9F6_EUCGR1.6e-5598.33Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03442 PE=4 SV... [more]
tr|A0A068TVQ9|A0A068TVQ9_COFCA1.6e-5598.33Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00032233001 PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR018065Ribosomal_L34e_CS
IPR038562Ribosomal_L34Ae_sf
IPR008195Ribosomal_L34Ae
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G002280.1CsGy1G002280.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008195Ribosomal protein L34AePRINTSPR01250RIBOSOMALL34coord: 66..88
score: 45.34
coord: 13..26
score: 59.18
coord: 44..54
score: 50.0
coord: 26..43
score: 53.57
IPR008195Ribosomal protein L34AePFAMPF01199Ribosomal_L34ecoord: 1..96
e-value: 1.7E-38
score: 130.7
IPR008195Ribosomal protein L34AePANTHERPTHR1075960S RIBOSOMAL PROTEIN L34coord: 1..120
IPR038562Ribosomal protein L34Ae superfamilyGENE3DG3DSA:3.40.1800.40coord: 39..120
e-value: 5.8E-34
score: 117.8
NoneNo IPR availablePANTHERPTHR10759:SF30SUBFAMILY NOT NAMEDcoord: 1..120
IPR018065Ribosomal protein L34e, conserved sitePROSITEPS01145RIBOSOMAL_L34Ecoord: 15..28

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G002280Cla019116Watermelon (97103) v1cgybwmB094
CsGy1G002280Cla010333Watermelon (97103) v1cgybwmB004
CsGy1G002280Csa1G009690Cucumber (Chinese Long) v2cgybcuB001
CsGy1G002280MELO3C017169Melon (DHL92) v3.5.1cgybmeB048
CsGy1G002280ClCG09G018270Watermelon (Charleston Gray)cgybwcgB003
CsGy1G002280ClCG06G016240Watermelon (Charleston Gray)cgybwcgB078
CsGy1G002280CSPI01G02230Wild cucumber (PI 183967)cgybcpiB001
CsGy1G002280CmaCh10G001870Cucurbita maxima (Rimu)cgybcmaB004
CsGy1G002280CmaCh11G001480Cucurbita maxima (Rimu)cgybcmaB040
CsGy1G002280CmoCh10G002040Cucurbita moschata (Rifu)cgybcmoB005
CsGy1G002280CmoCh11G001600Cucurbita moschata (Rifu)cgybcmoB028
CsGy1G002280Lsi02G014880Bottle gourd (USVL1VR-Ls)cgyblsiB040
CsGy1G002280Lsi06G014710Bottle gourd (USVL1VR-Ls)cgyblsiB067
CsGy1G002280Cp4.1LG04g15100Cucurbita pepo (Zucchini)cgybcpeB126
CsGy1G002280Cp4.1LG18g07930Cucurbita pepo (Zucchini)cgybcpeB053
CsGy1G002280MELO3C017169.2Melon (DHL92) v3.6.1cgybmedB043
CsGy1G002280CsaV3_1G002290Cucumber (Chinese Long) v3cgybcucB002
CsGy1G002280Cla97C09G179680Watermelon (97103) v2cgybwmbB088
CsGy1G002280Cla97C06G125840Watermelon (97103) v2cgybwmbB076
CsGy1G002280Bhi02G000234Wax gourdcgybwgoB092
CsGy1G002280Bhi06G000339Wax gourdcgybwgoB009
CsGy1G002280Carg10409Silver-seed gourdcarcgybB0371
CsGy1G002280Carg18185Silver-seed gourdcarcgybB0611
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G002280Cucumber (Gy14) v2cgybcgybB002
CsGy1G002280Cucumber (Gy14) v2cgybcgybB029
CsGy1G002280Cucurbita maxima (Rimu)cgybcmaB103
CsGy1G002280Cucurbita maxima (Rimu)cgybcmaB130
CsGy1G002280Cucurbita moschata (Rifu)cgybcmoB119
CsGy1G002280Cucurbita pepo (Zucchini)cgybcpeB014
CsGy1G002280Cucurbita pepo (Zucchini)cgybcpeB061
CsGy1G002280Cucurbita pepo (Zucchini)cgybcpeB101
CsGy1G002280Cucurbita pepo (Zucchini)cgybcpeB108
CsGy1G002280Cucumber (Chinese Long) v2cgybcuB004
CsGy1G002280Bottle gourd (USVL1VR-Ls)cgyblsiB021
CsGy1G002280Melon (DHL92) v3.5.1cgybmeB007
CsGy1G002280Melon (DHL92) v3.5.1cgybmeB024
CsGy1G002280Melon (DHL92) v3.6.1cgybmedB005
CsGy1G002280Melon (DHL92) v3.6.1cgybmedB024
CsGy1G002280Watermelon (Charleston Gray)cgybwcgB054
CsGy1G002280Watermelon (Charleston Gray)cgybwcgB060
CsGy1G002280Watermelon (97103) v1cgybwmB065
CsGy1G002280Wild cucumber (PI 183967)cgybcpiB003
CsGy1G002280Wild cucumber (PI 183967)cgybcpiB031
CsGy1G002280Cucumber (Chinese Long) v3cgybcucB004
CsGy1G002280Cucumber (Chinese Long) v3cgybcucB039
CsGy1G002280Watermelon (97103) v2cgybwmbB054
CsGy1G002280Watermelon (97103) v2cgybwmbB058
CsGy1G002280Wax gourdcgybwgoB067