CsGy1G001840 (gene) Cucumber (Gy14) v2

NameCsGy1G001840
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr1 : 1183557 .. 1184425 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTAGTTTTATTCTATAGACTTAATATTTTAAAATTAAAGGAATAATTAAGATTGTTATATTTAAAAAAAATTGTGGGAAGTTATTACCAATAGATTTTGTTATCATTATTCTTAAAATTGTTATTTATAATTATCCTAATTATAATATACAAAAAGCTTGGTGGATGATAACAACGTAGAGACCAAAACAAATCATTCCATTCAACATTTCTAAAAACTAACACACAATAGAAATTGAAAATTTCATATTCATAGTAAGCATCAACTCTATCATTTTTCTCATACGGCAAGATTCCTCGCCAGAATCCCTTCAAATGAAATCCCAGGTCCAAACGCCAGAATCAATCCCCATTCCTCAATTTTCCTACCTTCCATCTTCATTTTCAAGCTTTCTTCCATCATGTATTCCAATACGTACACGATCGTGTTACTACTCGCATTTCCATAGTCCATCAGAGCTCGTCGGCTCGCTGTCAGCTTCTCAGGTAACAGTTCTAGCCTCTTCTCCAACCTGTTCAATATCGCTGGCCCACCTGGATGTACTGCCCAGAATATTTTGTTGTATTCTTTCTCATGTAACCCAAGTGTTTGAAGAAATGTCTCACAGAAACTTTCGATGTTGTCTTCTATTATCTGAGGAAGTTCTCTTGTTATTGTGAAACTAATACCTTCCTCCGACAGTTTCCCATCGATTATGTTCTGAGTATCTGGAATGAATTTCTGGGTTGTTGTGTGGAGTTCAAAGAGTGGTCGTTCAATGCCCAAAAAAGGGTCTCTCCCAATTACCATCGCCCCTGCACCATCCCCAAATAGTGCCACGCCTACGAGATCGTATGGACGATTTACACTCGGTGGCTTGAAGCTGTAA

mRNA sequence

TTTAGTTTTATTCTATAGACTTAATATTTTAAAATTAAAGGAATAATTAAGATTGTTATATTTAAAAAAAATTGTGGGAAGTTATTACCAATAGATTTTGTTATCATTATTCTTAAAATTGTTATTTATAATTATCCTAATTATAATATACAAAAAGCTTGGTGGATGATAACAACGTAGAGACCAAAACAAATCATTCCATTCAACATTTCTAAAAACTAACACACAATAGAAATTGAAAATTTCATATTCATAGTAAGCATCAACTCTATCATTTTTCTCATACGGCAAGATTCCTCGCCAGAATCCCTTCAAATGAAATCCCAGGTCCAAACGCCAGAATCAATCCCCATTCCTCAATTTTCCTACCTTCCATCTTCATTTTCAAGCTTTCTTCCATCATGTATTCCAATACGTACACGATCGTGTTACTACTCGCATTTCCATAGTCCATCAGAGCTCGTCGGCTCGCTGTCAGCTTCTCAGAGTGGTCGTTCAATGCCCAAAAAAGGGTCTCTCCCAATTACCATCGCCCCTGCACCATCCCCAAATAGTGCCACGCCTACGAGATCGTATGGACGATTTACACTCGGTGGCTTGAAGCTGTAA

Coding sequence (CDS)

ATGAAATCCCAGGTCCAAACGCCAGAATCAATCCCCATTCCTCAATTTTCCTACCTTCCATCTTCATTTTCAAGCTTTCTTCCATCATGTATTCCAATACGTACACGATCGTGTTACTACTCGCATTTCCATAGTCCATCAGAGCTCGTCGGCTCGCTGTCAGCTTCTCAGAGTGGTCGTTCAATGCCCAAAAAAGGGTCTCTCCCAATTACCATCGCCCCTGCACCATCCCCAAATAGTGCCACGCCTACGAGATCGTATGGACGATTTACACTCGGTGGCTTGAAGCTGTAA

Protein sequence

MKSQVQTPESIPIPQFSYLPSSFSSFLPSCIPIRTRSCYYSHFHSPSELVGSLSASQSGRSMPKKGSLPITIAPAPSPNSATPTRSYGRFTLGGLKL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G001840.1CsGy1G001840.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..87

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G001840Watermelon (97103) v2cgybwmbB005
CsGy1G001840Watermelon (97103) v2cgybwmbB058
CsGy1G001840Wax gourdcgybwgoB057
CsGy1G001840Wax gourdcgybwgoB067
CsGy1G001840Wax gourdcgybwgoB092
CsGy1G001840Melon (DHL92) v3.6.1cgybmedB043
CsGy1G001840Cucumber (Gy14) v2cgybcgybB029
CsGy1G001840Cucurbita maxima (Rimu)cgybcmaB004
CsGy1G001840Cucurbita maxima (Rimu)cgybcmaB040
CsGy1G001840Cucurbita maxima (Rimu)cgybcmaB066
CsGy1G001840Cucurbita maxima (Rimu)cgybcmaB099
CsGy1G001840Cucurbita maxima (Rimu)cgybcmaB130
CsGy1G001840Cucurbita moschata (Rifu)cgybcmoB005
CsGy1G001840Cucurbita moschata (Rifu)cgybcmoB028
CsGy1G001840Cucurbita moschata (Rifu)cgybcmoB062
CsGy1G001840Cucurbita moschata (Rifu)cgybcmoB093
CsGy1G001840Cucurbita moschata (Rifu)cgybcmoB119
CsGy1G001840Cucurbita pepo (Zucchini)cgybcpeB012
CsGy1G001840Cucurbita pepo (Zucchini)cgybcpeB053
CsGy1G001840Cucurbita pepo (Zucchini)cgybcpeB061
CsGy1G001840Cucurbita pepo (Zucchini)cgybcpeB085
CsGy1G001840Cucurbita pepo (Zucchini)cgybcpeB108
CsGy1G001840Cucurbita pepo (Zucchini)cgybcpeB126
CsGy1G001840Cucumber (Chinese Long) v2cgybcuB001
CsGy1G001840Cucumber (Chinese Long) v2cgybcuB010
CsGy1G001840Cucumber (Chinese Long) v2cgybcuB035
CsGy1G001840Bottle gourd (USVL1VR-Ls)cgyblsiB032
CsGy1G001840Bottle gourd (USVL1VR-Ls)cgyblsiB052
CsGy1G001840Bottle gourd (USVL1VR-Ls)cgyblsiB067
CsGy1G001840Melon (DHL92) v3.5.1cgybmeB007
CsGy1G001840Melon (DHL92) v3.5.1cgybmeB015
CsGy1G001840Melon (DHL92) v3.5.1cgybmeB048
CsGy1G001840Melon (DHL92) v3.6.1cgybmedB013
CsGy1G001840Melon (DHL92) v3.6.1cgybmedB005
CsGy1G001840Melon (DHL92) v3.6.1cgybmedB055
CsGy1G001840Watermelon (Charleston Gray)cgybwcgB015
CsGy1G001840Watermelon (Charleston Gray)cgybwcgB060
CsGy1G001840Watermelon (Charleston Gray)cgybwcgB078
CsGy1G001840Watermelon (97103) v1cgybwmB040
CsGy1G001840Watermelon (97103) v1cgybwmB055
CsGy1G001840Watermelon (97103) v1cgybwmB094
CsGy1G001840Wild cucumber (PI 183967)cgybcpiB001
CsGy1G001840Wild cucumber (PI 183967)cgybcpiB009
CsGy1G001840Wild cucumber (PI 183967)cgybcpiB031
CsGy1G001840Silver-seed gourdcarcgybB0371
CsGy1G001840Silver-seed gourdcarcgybB0501
CsGy1G001840Silver-seed gourdcarcgybB0611
CsGy1G001840Silver-seed gourdcarcgybB0990
CsGy1G001840Cucumber (Chinese Long) v3cgybcucB002
CsGy1G001840Cucumber (Chinese Long) v3cgybcucB009
CsGy1G001840Cucumber (Chinese Long) v3cgybcucB028
CsGy1G001840Cucumber (Chinese Long) v3cgybcucB039
CsGy1G001840Watermelon (97103) v2cgybwmbB076