CsGy1G001050 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G001050
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionPentatricopeptide repeat-containing protein, putative
LocationChr1 : 593021 .. 594919 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGAGGAGAAACGCAATTTTCACTTCCCTCAGATTGGCAAATTCCTTCTTTTCGACTCGGTCTCGATATCCCCAGGTGACTCGGTTTTCACCTTCTTCTTATGTTTCTCATCAGTCCCTCGTCTCCCATTTCACAATCAACCATCCTGTTCTGTTTTTCTCGTCGAACCCCCAATCGCTTCTCCAGCTTGTTTCGACCAACGATTGGTCGGAAATGTTAGAAACTGAATTAGAGACTTTAAACCCTACGCTCACACACGAAACTGTTGTCTATGTTTTGAAAAGACTTGACAAACAACCCCAAAAGGCCTCTGAGTTCTTCAACTGGGCTTCTGGGAAGAATGGGTCTACTCAAAGTTCTTCCATTTATAGCATGTTGCTTAGGATTTTTGTTCAGAATGAGTCCATGAAATTGTTCTGGATTACGTTAAGGTTAATGAAAGAACGAGGGTTTTACCTAGATGAGGAAACTTATAAGACCATTTTAGGGGTTTTGAGAAAGTCGAAGAAGGCTGCAGATGCCACGGGTTTGACTCATTTTTACAATCGAATGCTTCAACAAAATGCCATGGACAGTGTGGTGCAGAAGGTGGTTGATATTGTTTTAGGATCTGATTGGAGTAATGATGTTCCTGGAAAACTTGAGGAGCTTGGTATTGCGTTATCAGATAACTTTGTAATTAGAGTGTTGAAGGAACTTCGAAATTCTCCACTGAAAGCCTTGAGTTTTTTTCATTGGGTTGGTTGTAGGCCGGATTATGATCATAACACAGTTTCATACAATGCAATTGCTAGGGTTCTTGGACGGGATGACTCCATCGAGGCTTTTTGGGGCGTGATTGAAGAAATGAAGCATGCTAATCATGAAATTGACATCGACACTTACATAAAGATCTCCAGGCAGTTTCAGAAGAGCAAGATGATGGGTGAGGCTGTCAAGCTTTATGAGCTTATGATGGATGGGCCATACAAGCCCTCGTTGCAGGATTGCAGCGTTCTTTTGCGGACCATCGCTGCTAGTGACAATCCAGATTTGAGCTTGGTTTACAGAGTGGCCAAGAAATTCGAGGCTACAGGGTACAGTCTCTCCAAAGCTATGTACGACGGAATCCATAGGTCATTGACAAGCACAGGAAAGTTTGATGATGCGGAGAATATCGTGAAGTCCATGAGAAATGCAGGATATGAACCTGATAATGTTACATACAGTCAGCTGGTATTTGGACTTTGCAAGGCTAGGAGACTTGAGGAAGCCCGTAAAGTGCTGGATGAGATGGAAGCACAAGGATGTATTCCTGATATCAAGACTTGGACTATTTTAATTCAAGGACATTGTAATGCCAATGAACTTGACATTGCTTTAGTTTGTTTTGCAAAGATGATAGAGAAGAACTGTGATCCAGATGCTGATCTTTTGGATGTGTTGATTAGTGGTTTCCTTAACCAGAAAAAGTTAAATGGTGCATATCAGTTGCTGATTGAGTTGACAAATAAGGCTCATGTAAGACCATGGCAGGCAACATATAAACAGTTAATTAAAAATCTTTTGGAAGTTAGGAAACTTGAGGAAGCCATTGCCCTCCTTCGTTTAATGAAGAAACAAAATTACCCACCTTTTCCAGAACCCTTTGTTCAATATATCTCCAAGTTTGGTACTGTGCAGGATGCTGATGATTTTCTGAAGGTTCTTAGTTCAAAAGAATATCCTTCCGTGTCTGCTTATCTTCATATTTTTAATTCATTTTTTAATGAAGGCAGATATTCTGAGGCCAAAGATCTGCTCTTCAAATGCCCACATCACATTCGAAAGCATAACGAAGTTTGTAAGCTCTTTGGATCTGCAGAAAGCAATACCACTGCTGCTACTCAATCTTCCTCCAATCCGATTGAAACTTAA

mRNA sequence

ATGACGAGGAGAAACGCAATTTTCACTTCCCTCAGATTGGCAAATTCCTTCTTTTCGACTCGGTCTCGATATCCCCAGGTGACTCGGTTTTCACCTTCTTCTTATGTTTCTCATCAGTCCCTCGTCTCCCATTTCACAATCAACCATCCTGTTCTGTTTTTCTCGTCGAACCCCCAATCGCTTCTCCAGCTTGTTTCGACCAACGATTGGTCGGAAATGTTAGAAACTGAATTAGAGACTTTAAACCCTACGCTCACACACGAAACTGTTGTCTATGTTTTGAAAAGACTTGACAAACAACCCCAAAAGGCCTCTGAGTTCTTCAACTGGGCTTCTGGGAAGAATGGGTCTACTCAAAGTTCTTCCATTTATAGCATGTTGCTTAGGATTTTTGTTCAGAATGAGTCCATGAAATTGTTCTGGATTACGTTAAGGTTAATGAAAGAACGAGGGTTTTACCTAGATGAGGAAACTTATAAGACCATTTTAGGGGTTTTGAGAAAGTCGAAGAAGGCTGCAGATGCCACGGGTTTGACTCATTTTTACAATCGAATGCTTCAACAAAATGCCATGGACAGTGTGGTGCAGAAGGTGGTTGATATTGTTTTAGGATCTGATTGGAGTAATGATGTTCCTGGAAAACTTGAGGAGCTTGGTATTGCGTTATCAGATAACTTTGTAATTAGAGTGTTGAAGGAACTTCGAAATTCTCCACTGAAAGCCTTGAGTTTTTTTCATTGGGTTGGTTGTAGGCCGGATTATGATCATAACACAGTTTCATACAATGCAATTGCTAGGGTTCTTGGACGGGATGACTCCATCGAGGCTTTTTGGGGCGTGATTGAAGAAATGAAGCATGCTAATCATGAAATTGACATCGACACTTACATAAAGATCTCCAGGCAGTTTCAGAAGAGCAAGATGATGGGTGAGGCTGTCAAGCTTTATGAGCTTATGATGGATGGGCCATACAAGCCCTCGTTGCAGGATTGCAGCGTTCTTTTGCGGACCATCGCTGCTAGTGACAATCCAGATTTGAGCTTGGTTTACAGAGTGGCCAAGAAATTCGAGGCTACAGGGTACAGTCTCTCCAAAGCTATGTACGACGGAATCCATAGGTCATTGACAAGCACAGGAAAGTTTGATGATGCGGAGAATATCGTGAAGTCCATGAGAAATGCAGGATATGAACCTGATAATGTTACATACAGTCAGCTGGTATTTGGACTTTGCAAGGCTAGGAGACTTGAGGAAGCCCGTAAAGTGCTGGATGAGATGGAAGCACAAGGATGTATTCCTGATATCAAGACTTGGACTATTTTAATTCAAGGACATTGTAATGCCAATGAACTTGACATTGCTTTAGTTTGTTTTGCAAAGATGATAGAGAAGAACTGTGATCCAGATGCTGATCTTTTGGATGTGTTGATTAGTGGTTTCCTTAACCAGAAAAAGTTAAATGGTGCATATCAGTTGCTGATTGAGTTGACAAATAAGGCTCATGTAAGACCATGGCAGGCAACATATAAACAGTTAATTAAAAATCTTTTGGAAGTTAGGAAACTTGAGGAAGCCATTGCCCTCCTTCGTTTAATGAAGAAACAAAATTACCCACCTTTTCCAGAACCCTTTGTTCAATATATCTCCAAGTTTGGTACTGTGCAGGATGCTGATGATTTTCTGAAGGTTCTTAGTTCAAAAGAATATCCTTCCGTGTCTGCTTATCTTCATATTTTTAATTCATTTTTTAATGAAGGCAGATATTCTGAGGCCAAAGATCTGCTCTTCAAATGCCCACATCACATTCGAAAGCATAACGAAGTTTGTAAGCTCTTTGGATCTGCAGAAAGCAATACCACTGCTGCTACTCAATCTTCCTCCAATCCGATTGAAACTTAA

Coding sequence (CDS)

ATGACGAGGAGAAACGCAATTTTCACTTCCCTCAGATTGGCAAATTCCTTCTTTTCGACTCGGTCTCGATATCCCCAGGTGACTCGGTTTTCACCTTCTTCTTATGTTTCTCATCAGTCCCTCGTCTCCCATTTCACAATCAACCATCCTGTTCTGTTTTTCTCGTCGAACCCCCAATCGCTTCTCCAGCTTGTTTCGACCAACGATTGGTCGGAAATGTTAGAAACTGAATTAGAGACTTTAAACCCTACGCTCACACACGAAACTGTTGTCTATGTTTTGAAAAGACTTGACAAACAACCCCAAAAGGCCTCTGAGTTCTTCAACTGGGCTTCTGGGAAGAATGGGTCTACTCAAAGTTCTTCCATTTATAGCATGTTGCTTAGGATTTTTGTTCAGAATGAGTCCATGAAATTGTTCTGGATTACGTTAAGGTTAATGAAAGAACGAGGGTTTTACCTAGATGAGGAAACTTATAAGACCATTTTAGGGGTTTTGAGAAAGTCGAAGAAGGCTGCAGATGCCACGGGTTTGACTCATTTTTACAATCGAATGCTTCAACAAAATGCCATGGACAGTGTGGTGCAGAAGGTGGTTGATATTGTTTTAGGATCTGATTGGAGTAATGATGTTCCTGGAAAACTTGAGGAGCTTGGTATTGCGTTATCAGATAACTTTGTAATTAGAGTGTTGAAGGAACTTCGAAATTCTCCACTGAAAGCCTTGAGTTTTTTTCATTGGGTTGGTTGTAGGCCGGATTATGATCATAACACAGTTTCATACAATGCAATTGCTAGGGTTCTTGGACGGGATGACTCCATCGAGGCTTTTTGGGGCGTGATTGAAGAAATGAAGCATGCTAATCATGAAATTGACATCGACACTTACATAAAGATCTCCAGGCAGTTTCAGAAGAGCAAGATGATGGGTGAGGCTGTCAAGCTTTATGAGCTTATGATGGATGGGCCATACAAGCCCTCGTTGCAGGATTGCAGCGTTCTTTTGCGGACCATCGCTGCTAGTGACAATCCAGATTTGAGCTTGGTTTACAGAGTGGCCAAGAAATTCGAGGCTACAGGGTACAGTCTCTCCAAAGCTATGTACGACGGAATCCATAGGTCATTGACAAGCACAGGAAAGTTTGATGATGCGGAGAATATCGTGAAGTCCATGAGAAATGCAGGATATGAACCTGATAATGTTACATACAGTCAGCTGGTATTTGGACTTTGCAAGGCTAGGAGACTTGAGGAAGCCCGTAAAGTGCTGGATGAGATGGAAGCACAAGGATGTATTCCTGATATCAAGACTTGGACTATTTTAATTCAAGGACATTGTAATGCCAATGAACTTGACATTGCTTTAGTTTGTTTTGCAAAGATGATAGAGAAGAACTGTGATCCAGATGCTGATCTTTTGGATGTGTTGATTAGTGGTTTCCTTAACCAGAAAAAGTTAAATGGTGCATATCAGTTGCTGATTGAGTTGACAAATAAGGCTCATGTAAGACCATGGCAGGCAACATATAAACAGTTAATTAAAAATCTTTTGGAAGTTAGGAAACTTGAGGAAGCCATTGCCCTCCTTCGTTTAATGAAGAAACAAAATTACCCACCTTTTCCAGAACCCTTTGTTCAATATATCTCCAAGTTTGGTACTGTGCAGGATGCTGATGATTTTCTGAAGGTTCTTAGTTCAAAAGAATATCCTTCCGTGTCTGCTTATCTTCATATTTTTAATTCATTTTTTAATGAAGGCAGATATTCTGAGGCCAAAGATCTGCTCTTCAAATGCCCACATCACATTCGAAAGCATAACGAAGTTTGTAAGCTCTTTGGATCTGCAGAAAGCAATACCACTGCTGCTACTCAATCTTCCTCCAATCCGATTGAAACTTAA

Protein sequence

MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQSLLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQSSSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTHFYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLKALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKISRQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATGYSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEARKVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGFLNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESNTTAATQSSSNPIET
Homology
[Close]
BLAST of CsGy1G001050 vs. NCBI nr
Match: XP_004138087.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucumis sativus] >KGN63535.1 hypothetical protein Csa_1G003530 [Cucumis sativus])

HSP 1 Score: 1003.8 bits (2594), Expect = 2.6e-289
Identity = 632/632 (100.00%), Postives = 632/632 (100.00%), Query Frame = 0 

Query: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60
           MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS
Sbjct: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60

Query: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120
           LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS
Sbjct: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120

Query: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180
           SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH
Sbjct: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180

Query: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240
           FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK
Sbjct: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240

Query: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300
           ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS
Sbjct: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300

Query: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360
           RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG
Sbjct: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360

Query: 361 YSLSKAMYDGIHRSLTSTGKFDDAENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           YSLSKAMYDGIHRSLTSTGKFDDAENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 YSLSKAMYDGIHRSLTSTGKFDDAENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540
           XXXXXXXXXXQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF
Sbjct: 481 XXXXXXXXXXQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540

Query: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
           PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600

Query: 601 HIRKHNEVCKLFGSAESNTTAATQSSSNPIET 633
           HIRKHNEVCKLFGSAESNTTAATQSSSNPIET
Sbjct: 601 HIRKHNEVCKLFGSAESNTTAATQSSSNPIET 632

[Close]
BLAST of CsGy1G001050 vs. NCBI nr
Match: XP_008464511.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucumis melo])

HSP 1 Score: 917.9 bits (2371), Expect = 1.9e-263
Identity = 586/623 (94.06%), Postives = 604/623 (96.95%), Query Frame = 0 

Query: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60
           MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSL+  F INHPVLFFSSNP S
Sbjct: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLIPLFRINHPVLFFSSNPHS 60

Query: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120
           LL+LVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKAS+FFNWASGKNGSTQS
Sbjct: 61  LLELVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASDFFNWASGKNGSTQS 120

Query: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180
           SSIYS+LLRIFVQNESMKLFWITLRLMKERGFYLDEETY TILGVLRK+KKAADAT L H
Sbjct: 121 SSIYSILLRIFVQNESMKLFWITLRLMKERGFYLDEETYLTILGVLRKAKKAADATALAH 180

Query: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240
           FYNRMLQ+NAMDSVVQKVV IVLGSDWSNDV GKLEELGIALSDNFVIRVLKELRNSPLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVHIVLGSDWSNDVAGKLEELGIALSDNFVIRVLKELRNSPLK 240

Query: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300
           ALSFF+WVGCRPDYDHNTVSYNAIARVL R+DSI+AFWGVIEEMK+A+ +IDIDTYIKIS
Sbjct: 241 ALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAFWGVIEEMKNASLDIDIDTYIKIS 300

Query: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360
           RQFQKSKMMG+AVKLYELMMDGPYKPSL DCS+LLRTIAASDNPDLSLVYRVAKKFEA+G
Sbjct: 301 RQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLRTIAASDNPDLSLVYRVAKKFEASG 360

Query: 361 YSLSKAMYDGIHRSLTSTGKFDDAENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           YSLSKA+YDGIHRSLTS GKFDDAE+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 YSLSKAIYDGIHRSLTSRGKFDDAEDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540
           XXXXXXXXXX  LIELTNKAHVRPWQATYK LIKNLLEVRKLEEA+ALLRLMKKQNYPPF
Sbjct: 481 XXXXXXXXXXXXLIELTNKAHVRPWQATYKHLIKNLLEVRKLEEAMALLRLMKKQNYPPF 540

Query: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
           PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600

Query: 601 HIRKHNEVCKLFGSAESNTTAAT 624
           HIRKHNEVCKLFGSAES TT AT
Sbjct: 601 HIRKHNEVCKLFGSAESKTTGAT 623

[Close]
BLAST of CsGy1G001050 vs. NCBI nr
Match: XP_022135299.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Momordica charantia])

HSP 1 Score: 830.5 bits (2144), Expect = 3.9e-237
Identity = 547/636 (86.01%), Postives = 583/636 (91.67%), Query Frame = 0 

Query: 1   MTRRNAIFTSLRLANSFF-----STRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFS 60
           MTRR AI TSLRLANSF      STRS YPQVTRFSP+S VSH+S    F   HP+LFFS
Sbjct: 1   MTRRTAILTSLRLANSFLSAQISSTRSLYPQVTRFSPTS-VSHRSHFLDFKSTHPLLFFS 60

Query: 61  SNPQSLLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKN 120
           S P SLLQ V  NDWS+ LE ELETLNPTLTHETVVYVLKRLDK+PQKAS FFNWA GKN
Sbjct: 61  SKPHSLLQFVLANDWSQDLENELETLNPTLTHETVVYVLKRLDKEPQKASGFFNWACGKN 120

Query: 121 GSTQSSSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADA 180
           G TQSSSIYS+LLRIFVQNESMK FWITLR+MKERGFYLDEETY T+LG+LR++KKAADA
Sbjct: 121 GFTQSSSIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTMLGILRRAKKAADA 180

Query: 181 TGLTHFYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELR 240
           T LTHFYNRMLQ+NAMDSVVQKVV+IVLGS+WS+DV   LE LGI LSDNFVIR LKELR
Sbjct: 181 TALTHFYNRMLQENAMDSVVQKVVNIVLGSEWSSDVAENLEGLGIVLSDNFVIRALKELR 240

Query: 241 NSPLKALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDT 300
           N PLKALSFFHWVGCR D+DHNTV+YNAIARVLGRDDSIEAFWGV++EMK+A HEIDIDT
Sbjct: 241 NFPLKALSFFHWVGCRLDFDHNTVTYNAIARVLGRDDSIEAFWGVVDEMKNAGHEIDIDT 300

Query: 301 YIKISRQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKK 360
           YIKISRQFQ+SKMMGEAVKLYELMMDGPY+PSLQDCSVLLR+I+ASDNPDLSLV+RVAKK
Sbjct: 301 YIKISRQFQRSKMMGEAVKLYELMMDGPYRPSLQDCSVLLRSISASDNPDLSLVFRVAKK 360

Query: 361 FEATGYSLSKAMYDGIHRSLTSTGKFDDAENXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           +EATGYSLSKA+YDGIHRSLTS GKFD+AENXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 YEATGYSLSKAIYDGIHRSLTSAGKFDEAENXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQ 540
           XXXXXXXXXXXXXXX   IEL NKAH+RPWQATYKQLI+ LLEVRKLEEAI LLRLMKKQ
Sbjct: 481 XXXXXXXXXXXXXXXXXXIELVNKAHLRPWQATYKQLIEKLLEVRKLEEAITLLRLMKKQ 540

Query: 541 NYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLL 600
           NYPPF EPFV YISKFGTV+DA DFLKVLSSKEYPSVSAYLH+FNSFFNEGR SEAKDLL
Sbjct: 541 NYPPFSEPFVLYISKFGTVEDAADFLKVLSSKEYPSVSAYLHVFNSFFNEGRCSEAKDLL 600

Query: 601 FKCPHHIRKHNEVCKLFGSAESNTTAATQSSSNPIE 632
           FKCPHHIRKH+EVCKLFGSAES +T AT+SSS P+E
Sbjct: 601 FKCPHHIRKHSEVCKLFGSAESKSTDATKSSSKPLE 635

[Close]
BLAST of CsGy1G001050 vs. NCBI nr
Match: XP_023530746.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 820.8 bits (2119), Expect = 3.1e-234
Identity = 534/617 (86.55%), Postives = 573/617 (92.87%), Query Frame = 0 

Query: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60
           M RR AI TSL LANS FSTRS + QVTRF PSS +SHQS    FT NH ++FFSS P S
Sbjct: 1   MARRKAILTSLTLANSLFSTRSSHSQVTRFLPSS-LSHQSRFPPFTTNHRIMFFSSKPHS 60

Query: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120
           LL+LV  NDWSE+LETELETLNPTLTHET+VYVLKRLDK+PQKAS+FFNWA GKNGSTQS
Sbjct: 61  LLELVLANDWSEILETELETLNPTLTHETMVYVLKRLDKEPQKASDFFNWACGKNGSTQS 120

Query: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180
           S IYS+LLRIFVQNESMK FWITLR+MKERGFYLDEETY TILGVL+++KKAADAT LTH
Sbjct: 121 SPIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTH 180

Query: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240
           FYNRMLQ+NAMDSVVQKVV+IVL S+W+NDV  KLE LGI LSD+FVIRVLKELRN PLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLK 240

Query: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300
            LSFFHWVGCRPDYDHNTV+YNAIARVLGRDDSIEAFWG++EEMK+A HEIDIDTYIKIS
Sbjct: 241 GLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKIS 300

Query: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360
           RQFQ+SKMMG+AVKLYELMMDGPYKPSLQDCSVLLR+I+ASDNPDLSLV+RVAKKFEATG
Sbjct: 301 RQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATG 360

Query: 361 YSLSKAMYDGIHRSLTSTGKFDDAENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           YSLSKA+YDGIHRSLTS GKFD+AENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 YSLSKAVYDGIHRSLTSAGKFDEAENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540
           XXXXXXXXXX       NKAH+RPWQATYK LI+ LLEVRKLEEAI+LLRLMKKQNYPPF
Sbjct: 481 XXXXXXXXXXXXXXXXXNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPF 540

Query: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
           PEPFVQYISKFGTV+DA +FLK LSSKEYPS+SAYLHIFNSFFNEGR+SEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHIFNSFFNEGRHSEAKDLLFKCPH 600

Query: 601 HIRKHNEVCKLFGSAES 618
           HIRKH+E+CKLFGSAES
Sbjct: 601 HIRKHSEICKLFGSAES 616

[Close]
BLAST of CsGy1G001050 vs. NCBI nr
Match: XP_022933685.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita moschata])

HSP 1 Score: 814.3 bits (2102), Expect = 2.9e-232
Identity = 531/616 (86.20%), Postives = 570/616 (92.53%), Query Frame = 0 

Query: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60
           M RR AI TSL LANS +STRS Y QVTRF PSS +SHQS    FT NH +LFFSS P S
Sbjct: 1   MARRKAILTSLTLANSLYSTRSCYSQVTRFLPSS-LSHQSRFPPFTTNHRILFFSSKPHS 60

Query: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120
           LL+LV  NDWSE LETELETLNPTLTHET+VYVLKRLDK+PQKAS+FF+WA GKNGSTQS
Sbjct: 61  LLELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQS 120

Query: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180
           S IYS+LLRI VQNESMK FWITLR+MKERGFYLDEETY TILGVL+++KKAADAT LTH
Sbjct: 121 SPIYSILLRIVVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTH 180

Query: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240
           FYNRMLQ+NAMDSVVQKVV+IVL S+W+NDV  KLE LGI LSD+FVIRVLKELRN PLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVNIVLRSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLK 240

Query: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300
            LSFFHWVGCRPDYDHNTV+YNAIARVLGRDDSIEAFWG++EEMK+A HEIDIDTYIKIS
Sbjct: 241 GLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKIS 300

Query: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360
           RQFQ+SKMMG+AVKLYELMMDGPYKPSLQDCSVLLR+I+ASDNPDLSLV+RVAKKFEATG
Sbjct: 301 RQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATG 360

Query: 361 YSLSKAMYDGIHRSLTSTGKFDDAENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           YSLSKA+YDGIHRSLTS GKFD+AENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 YSLSKAVYDGIHRSLTSAGKFDEAENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540
           XXXXXXXXXX       NKAH+RPWQATYK LI+ LLEVRKLEEAI+LLRLMKKQNYPPF
Sbjct: 481 XXXXXXXXXXXXXXXXXNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPF 540

Query: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
           PEPFVQYISKFGTV+DA +FLK LSSKEYPS+SAYLH+FNSFFNEGR+SEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPH 600

Query: 601 HIRKHNEVCKLFGSAE 617
           HIRKH+E+CKLFGSAE
Sbjct: 601 HIRKHSEICKLFGSAE 615

[Close]
BLAST of CsGy1G001050 vs. TAIR10
Match: AT3G48250.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 407.5 bits (1046), Expect = 1.5e-113
Identity = 218/392 (55.61%), Postives = 280/392 (71.43%), Query Frame = 0 

Query: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLF----FSS 60
           M R  AI +SLR A S  STRS Y   ++   SS +S   L S   +    L+    FSS
Sbjct: 1   MYRSMAILSSLRHAYSQISTRS-YLSRSKVGFSSNLS-SPLDSFAIVPSRFLWKFRTFSS 60

Query: 61  NPQSLLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNG 120
            P S+LQLV  NDWS+ +E  L   + +LTHET +YVL++L+K P+KA  F +W    +G
Sbjct: 61  KPDSMLQLVLENDWSKEVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDSG 120

Query: 121 STQSSSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADAT 180
            + S+ +YS++LRI VQ  SMK FW+TLR MK+ GFYLDE+TYKTI G L K K  ADA 
Sbjct: 121 LSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADAV 180

Query: 181 GLTHFYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRN 240
            + HFY RML++NAM  V  +V  +V   DWS +V  +L+E+ + LSDNFVIRVLKELR 
Sbjct: 181 AVAHFYERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELRE 240

Query: 241 SPLKALSFFHWV---GCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDI 300
            PLKAL+FFHWV   G    Y H+TV+YNA  RVL R +S+  FW V++EMK A +++D+
Sbjct: 241 HPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDL 300

Query: 301 DTYIKISRQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVA 360
           DTYIK+SRQFQKS+MM E VKLYE MMDGP+KPS+QDCS+LLR ++ S NPDL LV+RV+
Sbjct: 301 DTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVS 360

Query: 361 KKFEATGYSLSKAMYDGIHRSLTSTGKFDDAE 386
           +K+E+TG SLSKA+YDGIHRSLTS G+FD+AE
Sbjct: 361 RKYESTGKSLSKAVYDGIHRSLTSVGRFDEAE 390

[Close]
BLAST of CsGy1G001050 vs. TAIR10
Match: AT5G15980.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 208.0 bits (528), Expect = 1.7e-53
Identity = 141/576 (24.48%), Postives = 252/576 (43.75%), Query Frame = 0 

Query: 55  SSNPQSLLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGK 114
           SS   +++ + S     + +  ELE+    ++ +  + VL++L+  P  A  FF W    
Sbjct: 84  SSAEATVIDIFSRLSGEDEIRKELESSGVVISQDLALKVLRKLESNPDVAKSFFQWIKEA 143

Query: 115 NGSTQSSSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAAD 174
           +    SS  Y+M+LRI   N  +  FW  + +MK++G  L       +    +K    +D
Sbjct: 144 SPEELSSKNYNMMLRILGGNGLVDEFWGLVDVMKKKGHGLSANVRDKVGDKFQKDGLESD 203

Query: 175 ATGLTHFYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKEL 234
              L   +      N+ ++V  +V  IV+  +W +DV  ++ +L +    + V  +++ L
Sbjct: 204 LLRLRKLFTSDCLDNSAENVCDRVCKIVMKEEWGDDVEKRVRDLNVEFKSDLVKMIVERL 263

Query: 235 RNSPLKALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDID 294
              P KAL FF W+     + H+  +YNA+ARVLG++  ++ F  ++ EM+ A +E++I+
Sbjct: 264 DVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIE 323

Query: 295 TYIKISRQFQKSKMMGEAVKLYELMMDG---PYKPSLQDCSVLLRTIAASDNPDLSLVYR 354
           TY+++S +F ++K++ EAV L+E+ M G      P+     +LL+ I  +   D+ L  R
Sbjct: 324 TYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSR 383

Query: 355 VAKKFEATGYSLSKAMYDGIHRSLTSTGKFDDA-ENXXXXXXXXXXXXXXXXXXXXXXXX 414
             K +   G +L+ ++   + +SL S  + + + E                         
Sbjct: 384 AVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLS 443

Query: 415 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 474
                                                                       
Sbjct: 444 RKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYAD 503

Query: 475 XXXXXXXXXXXXXXXXXXXXQLLIELTNKAHVRPWQATYKQLIKNLLEVR-----KLEEA 534
                               +LL     K  ++P  +TYK L+ NLL  +       EEA
Sbjct: 504 YSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEA 563

Query: 535 IALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNE 594
           ++LL +MK   +PPF +PF+ Y S  G   +A  FLK ++S  +P +S  L +F +    
Sbjct: 564 LSLLPIMKDHGFPPFIDPFMSYFSSTGKSTEALGFLKAMTSNNFPYISVVLRVFETMMKS 623

Query: 595 GRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESNTTA 622
            R+SEA+DLL  CP++IR + +V +LF + + N +A
Sbjct: 624 ARHSEAQDLLSLCPNYIRNNPDVLELFNTMKPNESA 659

[Close]
BLAST of CsGy1G001050 vs. TAIR10
Match: AT3G02490.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 206.8 bits (525), Expect = 3.8e-53
Identity = 144/562 (25.62%), Postives = 244/562 (43.42%), Query Frame = 0 

Query: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120
           ++ + S  +  + +  EL++ +  ++HE  + VL+ L+  P  A  FF W         S
Sbjct: 84  VIDVFSRLNGKDEITKELDSNDVVISHELALRVLRELESSPDVAGRFFKWGLEAYPQKLS 143

Query: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180
           S  Y+ +LRIF  N  +  FW  +  MK++G  +       +    +K     D   L  
Sbjct: 144 SKSYNTMLRIFGVNGLVDEFWRLVDDMKKKGHGVSANVRDRVGDKFKKDGLENDLERLKE 203

Query: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240
            +      N+          IV+   W  DV  +L +L +    + V  VL++L   P K
Sbjct: 204 LFASGSMDNSXXXXXXXXXXIVMKEVWGADVEKQLRDLKLEFKSDVVKMVLEKLDVDPRK 263

Query: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300
           AL FF W+     + H+  +YNA+ARVLG++  ++ F  +IEE++ A +E++++TY+++S
Sbjct: 264 ALLFFRWIDESGSFKHDEKTYNAMARVLGKEKFLDRFQHMIEEIRSAGYEMEMETYVRVS 323

Query: 301 RQFQKSKMMGEAVKLYELMMDGPYK--PSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEA 360
            +F ++KM+ EAV+L+E  M G     P+   CS+LL+ I  +   D+ L  R  K +  
Sbjct: 324 ARFCQTKMIKEAVELFEFAMAGSISNTPTPHCCSLLLKKIVTAKKLDMDLFTRTLKAYTG 383

Query: 361 TGYSLSKAMYDGIHRSLTSTGKFDDA-ENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
            G  +   M   + +SL S  +F  + E                                
Sbjct: 384 NGNVVPDVMLQHVLKSLRSVDRFGQSNEVLKAMNEGGYVPSGDLQSVIASGLSRKGKKDE 443

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
                                                                       
Sbjct: 444 ANELVNFMEASGNHLDDKAMASLVEGHCDAKDLEEASECFKKMIGKEGVSYAGYAFEKLV 503

Query: 481 XXXXXXXXXXXXXQLLIELTNKAHVRPWQATYKQLIKNLLEVR-----KLEEAIALLRLM 540
                        +L  EL  +  ++PW +TYK +++NLL  +       EEA++LL +M
Sbjct: 504 LAYCNSFQARDVYKLFSELVKQNQLKPWHSTYKIMVRNLLMKKVARDGGFEEALSLLPMM 563

Query: 541 KKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAK 600
           +   +PPF +PF+ Y+S  GT  +A  FLK ++SK++PS S  L +F +     R+SEA+
Sbjct: 564 RNHGFPPFVDPFMDYLSNSGTSAEAFAFLKAVTSKKFPSNSMVLRVFEAMLKSARHSEAQ 623

Query: 601 DLLFKCPHHIRKHNEVCKLFGS 615
           DLL   P +IR++ EV +LF +
Sbjct: 624 DLLSMSPSYIRRNAEVLELFNT 645

[Close]
BLAST of CsGy1G001050 vs. TAIR10
Match: AT3G22670.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 1.8e-10
Identity = 56/204 (27.45%), Postives = 91/204 (44.61%), Query Frame = 0 

Query: 195 VQKVVDIVLGSDWSN-DVPGKLEELGIALSDNFVIRVLKELRNSPLKALSFFHWVGCRPD 254
           + KV D +   D S+ DV  +L +  + ++++ V++VL+   N   +A  FF W   +  
Sbjct: 102 IDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTG 161

Query: 255 YDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHE---IDIDTYIKISRQFQKSKMMG 314
           Y H+  +YNA+  VLG+  + +  W ++ EM + N E   + +DT  K+ R+  KS    
Sbjct: 162 YVHSGHTYNAMVDVLGKCRNFDLMWELVNEM-NKNEESKLVTLDTMSKVMRRLAKSGKYN 221

Query: 315 EAV-------KLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRV---AKKFEATG 374
           +AV       K Y +  D     SL D  V   +I  +    L L   +   A+ F    
Sbjct: 222 KAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILI 281

Query: 375 YSLSKAMYDGIHRSLTSTGKFDDA 385
           +   KA             KFDDA
Sbjct: 282 HGFCKAR------------KFDDA 292

[Close]
BLAST of CsGy1G001050 vs. TAIR10
Match: AT3G62470.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 2.0e-09
Identity = 37/144 (25.69%), Postives = 74/144 (51.39%), Query Frame = 0 

Query: 195 VQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLKALSFFHWVGCRPDY 254
           V KV+D +   D   ++   L+E+ + LS + ++ VL+  R++   A  FF W   R  +
Sbjct: 134 VCKVIDELFALD--RNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGF 193

Query: 255 DHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKISRQFQKSKMMGEAVK 314
            H++ +YN++  +L +    E    V+EEM      + ++T+    + F  +K   +AV 
Sbjct: 194 AHDSRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLTMETFTIAMKAFAAAKERKKAVG 253

Query: 315 LYELMMDGPYKPSLQDCSVLLRTI 339
           ++ELM    +K  ++  + LL ++
Sbjct: 254 IFELMKKYKFKIGVETINCLLDSL 274

[Close]
BLAST of CsGy1G001050 vs. Swiss-Prot
Match: sp|Q9STK5|PP269_ARATH (Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g48250 PE=2 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 2.7e-112
Identity = 218/392 (55.61%), Postives = 280/392 (71.43%), Query Frame = 0 

Query: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLF----FSS 60
           M R  AI +SLR A S  STRS Y   ++   SS +S   L S   +    L+    FSS
Sbjct: 1   MYRSMAILSSLRHAYSQISTRS-YLSRSKVGFSSNLS-SPLDSFAIVPSRFLWKFRTFSS 60

Query: 61  NPQSLLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNG 120
            P S+LQLV  NDWS+ +E  L   + +LTHET +YVL++L+K P+KA  F +W    +G
Sbjct: 61  KPDSMLQLVLENDWSKEVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDSG 120

Query: 121 STQSSSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADAT 180
            + S+ +YS++LRI VQ  SMK FW+TLR MK+ GFYLDE+TYKTI G L K K  ADA 
Sbjct: 121 LSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADAV 180

Query: 181 GLTHFYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRN 240
            + HFY RML++NAM  V  +V  +V   DWS +V  +L+E+ + LSDNFVIRVLKELR 
Sbjct: 181 AVAHFYERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELRE 240

Query: 241 SPLKALSFFHWV---GCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDI 300
            PLKAL+FFHWV   G    Y H+TV+YNA  RVL R +S+  FW V++EMK A +++D+
Sbjct: 241 HPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDL 300

Query: 301 DTYIKISRQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVA 360
           DTYIK+SRQFQKS+MM E VKLYE MMDGP+KPS+QDCS+LLR ++ S NPDL LV+RV+
Sbjct: 301 DTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVS 360

Query: 361 KKFEATGYSLSKAMYDGIHRSLTSTGKFDDAE 386
           +K+E+TG SLSKA+YDGIHRSLTS G+FD+AE
Sbjct: 361 RKYESTGKSLSKAVYDGIHRSLTSVGRFDEAE 390

[Close]
BLAST of CsGy1G001050 vs. Swiss-Prot
Match: sp|Q8LPF1|PP387_ARATH (Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15980 PE=2 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 3.1e-52
Identity = 141/576 (24.48%), Postives = 252/576 (43.75%), Query Frame = 0 

Query: 55  SSNPQSLLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGK 114
           SS   +++ + S     + +  ELE+    ++ +  + VL++L+  P  A  FF W    
Sbjct: 84  SSAEATVIDIFSRLSGEDEIRKELESSGVVISQDLALKVLRKLESNPDVAKSFFQWIKEA 143

Query: 115 NGSTQSSSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAAD 174
           +    SS  Y+M+LRI   N  +  FW  + +MK++G  L       +    +K    +D
Sbjct: 144 SPEELSSKNYNMMLRILGGNGLVDEFWGLVDVMKKKGHGLSANVRDKVGDKFQKDGLESD 203

Query: 175 ATGLTHFYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKEL 234
              L   +      N+ ++V  +V  IV+  +W +DV  ++ +L +    + V  +++ L
Sbjct: 204 LLRLRKLFTSDCLDNSAENVCDRVCKIVMKEEWGDDVEKRVRDLNVEFKSDLVKMIVERL 263

Query: 235 RNSPLKALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDID 294
              P KAL FF W+     + H+  +YNA+ARVLG++  ++ F  ++ EM+ A +E++I+
Sbjct: 264 DVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIE 323

Query: 295 TYIKISRQFQKSKMMGEAVKLYELMMDG---PYKPSLQDCSVLLRTIAASDNPDLSLVYR 354
           TY+++S +F ++K++ EAV L+E+ M G      P+     +LL+ I  +   D+ L  R
Sbjct: 324 TYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSR 383

Query: 355 VAKKFEATGYSLSKAMYDGIHRSLTSTGKFDDA-ENXXXXXXXXXXXXXXXXXXXXXXXX 414
             K +   G +L+ ++   + +SL S  + + + E                         
Sbjct: 384 AVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLS 443

Query: 415 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 474
                                                                       
Sbjct: 444 RKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYAD 503

Query: 475 XXXXXXXXXXXXXXXXXXXXQLLIELTNKAHVRPWQATYKQLIKNLLEVR-----KLEEA 534
                               +LL     K  ++P  +TYK L+ NLL  +       EEA
Sbjct: 504 YSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEA 563

Query: 535 IALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNE 594
           ++LL +MK   +PPF +PF+ Y S  G   +A  FLK ++S  +P +S  L +F +    
Sbjct: 564 LSLLPIMKDHGFPPFIDPFMSYFSSTGKSTEALGFLKAMTSNNFPYISVVLRVFETMMKS 623

Query: 595 GRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESNTTA 622
            R+SEA+DLL  CP++IR + +V +LF + + N +A
Sbjct: 624 ARHSEAQDLLSLCPNYIRNNPDVLELFNTMKPNESA 659

[Close]
BLAST of CsGy1G001050 vs. Swiss-Prot
Match: sp|Q9M891|PP208_ARATH (Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g02490 PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 6.9e-52
Identity = 144/562 (25.62%), Postives = 244/562 (43.42%), Query Frame = 0 

Query: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120
           ++ + S  +  + +  EL++ +  ++HE  + VL+ L+  P  A  FF W         S
Sbjct: 84  VIDVFSRLNGKDEITKELDSNDVVISHELALRVLRELESSPDVAGRFFKWGLEAYPQKLS 143

Query: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180
           S  Y+ +LRIF  N  +  FW  +  MK++G  +       +    +K     D   L  
Sbjct: 144 SKSYNTMLRIFGVNGLVDEFWRLVDDMKKKGHGVSANVRDRVGDKFKKDGLENDLERLKE 203

Query: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240
            +      N+          IV+   W  DV  +L +L +    + V  VL++L   P K
Sbjct: 204 LFASGSMDNSXXXXXXXXXXIVMKEVWGADVEKQLRDLKLEFKSDVVKMVLEKLDVDPRK 263

Query: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300
           AL FF W+     + H+  +YNA+ARVLG++  ++ F  +IEE++ A +E++++TY+++S
Sbjct: 264 ALLFFRWIDESGSFKHDEKTYNAMARVLGKEKFLDRFQHMIEEIRSAGYEMEMETYVRVS 323

Query: 301 RQFQKSKMMGEAVKLYELMMDGPYK--PSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEA 360
            +F ++KM+ EAV+L+E  M G     P+   CS+LL+ I  +   D+ L  R  K +  
Sbjct: 324 ARFCQTKMIKEAVELFEFAMAGSISNTPTPHCCSLLLKKIVTAKKLDMDLFTRTLKAYTG 383

Query: 361 TGYSLSKAMYDGIHRSLTSTGKFDDA-ENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
            G  +   M   + +SL S  +F  + E                                
Sbjct: 384 NGNVVPDVMLQHVLKSLRSVDRFGQSNEVLKAMNEGGYVPSGDLQSVIASGLSRKGKKDE 443

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
                                                                       
Sbjct: 444 ANELVNFMEASGNHLDDKAMASLVEGHCDAKDLEEASECFKKMIGKEGVSYAGYAFEKLV 503

Query: 481 XXXXXXXXXXXXXQLLIELTNKAHVRPWQATYKQLIKNLLEVR-----KLEEAIALLRLM 540
                        +L  EL  +  ++PW +TYK +++NLL  +       EEA++LL +M
Sbjct: 504 LAYCNSFQARDVYKLFSELVKQNQLKPWHSTYKIMVRNLLMKKVARDGGFEEALSLLPMM 563

Query: 541 KKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAK 600
           +   +PPF +PF+ Y+S  GT  +A  FLK ++SK++PS S  L +F +     R+SEA+
Sbjct: 564 RNHGFPPFVDPFMDYLSNSGTSAEAFAFLKAVTSKKFPSNSMVLRVFEAMLKSARHSEAQ 623

Query: 601 DLLFKCPHHIRKHNEVCKLFGS 615
           DLL   P +IR++ EV +LF +
Sbjct: 624 DLLSMSPSYIRRNAEVLELFNT 645

[Close]
BLAST of CsGy1G001050 vs. Swiss-Prot
Match: sp|Q9LUJ4|PP248_ARATH (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22670 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.2e-09
Identity = 56/204 (27.45%), Postives = 91/204 (44.61%), Query Frame = 0 

Query: 195 VQKVVDIVLGSDWSN-DVPGKLEELGIALSDNFVIRVLKELRNSPLKALSFFHWVGCRPD 254
           + KV D +   D S+ DV  +L +  + ++++ V++VL+   N   +A  FF W   +  
Sbjct: 102 IDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTG 161

Query: 255 YDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHE---IDIDTYIKISRQFQKSKMMG 314
           Y H+  +YNA+  VLG+  + +  W ++ EM + N E   + +DT  K+ R+  KS    
Sbjct: 162 YVHSGHTYNAMVDVLGKCRNFDLMWELVNEM-NKNEESKLVTLDTMSKVMRRLAKSGKYN 221

Query: 315 EAV-------KLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRV---AKKFEATG 374
           +AV       K Y +  D     SL D  V   +I  +    L L   +   A+ F    
Sbjct: 222 KAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILI 281

Query: 375 YSLSKAMYDGIHRSLTSTGKFDDA 385
           +   KA             KFDDA
Sbjct: 282 HGFCKAR------------KFDDA 292

[Close]
BLAST of CsGy1G001050 vs. Swiss-Prot
Match: sp|Q9LZP3|PP293_ARATH (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 3.6e-08
Identity = 37/144 (25.69%), Postives = 74/144 (51.39%), Query Frame = 0 

Query: 195 VQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLKALSFFHWVGCRPDY 254
           V KV+D +   D   ++   L+E+ + LS + ++ VL+  R++   A  FF W   R  +
Sbjct: 134 VCKVIDELFALD--RNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGF 193

Query: 255 DHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKISRQFQKSKMMGEAVK 314
            H++ +YN++  +L +    E    V+EEM      + ++T+    + F  +K   +AV 
Sbjct: 194 AHDSRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLTMETFTIAMKAFAAAKERKKAVG 253

Query: 315 LYELMMDGPYKPSLQDCSVLLRTI 339
           ++ELM    +K  ++  + LL ++
Sbjct: 254 IFELMKKYKFKIGVETINCLLDSL 274

[Close]
BLAST of CsGy1G001050 vs. TrEMBL
Match: tr|A0A0A0LNT7|A0A0A0LNT7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G003530 PE=4 SV=1)

HSP 1 Score: 1003.8 bits (2594), Expect = 1.7e-289
Identity = 632/632 (100.00%), Postives = 632/632 (100.00%), Query Frame = 0 

Query: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60
           MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS
Sbjct: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60

Query: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120
           LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS
Sbjct: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120

Query: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180
           SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH
Sbjct: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180

Query: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240
           FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK
Sbjct: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240

Query: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300
           ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS
Sbjct: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300

Query: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360
           RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG
Sbjct: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360

Query: 361 YSLSKAMYDGIHRSLTSTGKFDDAENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           YSLSKAMYDGIHRSLTSTGKFDDAENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 YSLSKAMYDGIHRSLTSTGKFDDAENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540
           XXXXXXXXXXQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF
Sbjct: 481 XXXXXXXXXXQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540

Query: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
           PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600

Query: 601 HIRKHNEVCKLFGSAESNTTAATQSSSNPIET 633
           HIRKHNEVCKLFGSAESNTTAATQSSSNPIET
Sbjct: 601 HIRKHNEVCKLFGSAESNTTAATQSSSNPIET 632

[Close]
BLAST of CsGy1G001050 vs. TrEMBL
Match: tr|A0A1S3CLM3|A0A1S3CLM3_CUCME (pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502372 PE=4 SV=1)

HSP 1 Score: 917.9 bits (2371), Expect = 1.2e-263
Identity = 586/623 (94.06%), Postives = 604/623 (96.95%), Query Frame = 0 

Query: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60
           MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSL+  F INHPVLFFSSNP S
Sbjct: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLIPLFRINHPVLFFSSNPHS 60

Query: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120
           LL+LVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKAS+FFNWASGKNGSTQS
Sbjct: 61  LLELVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASDFFNWASGKNGSTQS 120

Query: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180
           SSIYS+LLRIFVQNESMKLFWITLRLMKERGFYLDEETY TILGVLRK+KKAADAT L H
Sbjct: 121 SSIYSILLRIFVQNESMKLFWITLRLMKERGFYLDEETYLTILGVLRKAKKAADATALAH 180

Query: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240
           FYNRMLQ+NAMDSVVQKVV IVLGSDWSNDV GKLEELGIALSDNFVIRVLKELRNSPLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVHIVLGSDWSNDVAGKLEELGIALSDNFVIRVLKELRNSPLK 240

Query: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300
           ALSFF+WVGCRPDYDHNTVSYNAIARVL R+DSI+AFWGVIEEMK+A+ +IDIDTYIKIS
Sbjct: 241 ALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAFWGVIEEMKNASLDIDIDTYIKIS 300

Query: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360
           RQFQKSKMMG+AVKLYELMMDGPYKPSL DCS+LLRTIAASDNPDLSLVYRVAKKFEA+G
Sbjct: 301 RQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLRTIAASDNPDLSLVYRVAKKFEASG 360

Query: 361 YSLSKAMYDGIHRSLTSTGKFDDAENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           YSLSKA+YDGIHRSLTS GKFDDAE+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 YSLSKAIYDGIHRSLTSRGKFDDAEDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540
           XXXXXXXXXX  LIELTNKAHVRPWQATYK LIKNLLEVRKLEEA+ALLRLMKKQNYPPF
Sbjct: 481 XXXXXXXXXXXXLIELTNKAHVRPWQATYKHLIKNLLEVRKLEEAMALLRLMKKQNYPPF 540

Query: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
           PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600

Query: 601 HIRKHNEVCKLFGSAESNTTAAT 624
           HIRKHNEVCKLFGSAES TT AT
Sbjct: 601 HIRKHNEVCKLFGSAESKTTGAT 623

[Close]
BLAST of CsGy1G001050 vs. TrEMBL
Match: tr|A0A2N9IT19|A0A2N9IT19_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56479 PE=4 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 1.4e-182
Identity = 456/625 (72.96%), Postives = 510/625 (81.60%), Query Frame = 0 

Query: 1   MTRRNAIFTSLRLANSFFSTR--SRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNP 60
           M R   I +SLRLANSF STR  +  P  T+ +     +     SHF   H  LFFSS P
Sbjct: 198 MNRARPILSSLRLANSFLSTRVHATRPLATQVTQFLSKNQSFSNSHFLNTHQKLFFSSKP 257

Query: 61  QSLLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGST 120
            S++QLV  NDWS+ LE ELE   P LTHETV+YVLK+LDK P+KAS FFNW   K G  
Sbjct: 258 NSVIQLVLANDWSDELERELEESCPRLTHETVIYVLKKLDKDPEKASSFFNWVCEKTGFR 317

Query: 121 QSSSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGL 180
            SS +YS++LRIFV   SMK FWITLR MKE+GFY+DEETY TILG L+K+K A+D   L
Sbjct: 318 PSSLVYSLMLRIFVNKVSMKQFWITLRKMKEQGFYVDEETYLTILGQLKKAKMASDVVAL 377

Query: 181 THFYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSP 240
            HF+NRML +NAMD+VV+KVV IVL S+WS+ V  +L EL I LSDNFVIRVLKELRN P
Sbjct: 378 NHFHNRMLLENAMDNVVKKVVVIVLDSEWSDGVENELGELKIVLSDNFVIRVLKELRNYP 437

Query: 241 LKALSFFHWVG-CRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYI 300
           LKAL FFHWVG C   Y+HNTV+YNA+ARVLGRDDSIE FW V+EEMK A HE+DIDTYI
Sbjct: 438 LKALKFFHWVGRCDNGYEHNTVTYNAVARVLGRDDSIELFWSVVEEMKSAGHEMDIDTYI 497

Query: 301 KISRQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFE 360
           KISRQFQK+KMM EAVKLYE MMDGP+KPS QDCS+LLR+I+A DNPDL LV+RVAKK+E
Sbjct: 498 KISRQFQKNKMMEEAVKLYEFMMDGPFKPSDQDCSLLLRSISAGDNPDLDLVFRVAKKYE 557

Query: 361 ATGYSLSKAMYDGIHRSLTSTGKFDDAENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           + G++LSKA YDGIHRSLTS G+FD+AEN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 558 SMGHALSKAAYDGIHRSLTSAGRFDEAENIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 617

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 618 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 677

Query: 481 XXXXXXXXXXXXXQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNY 540
           XXXXXXXXXXXXX           +RPWQATYK LI+ LL VRKLEEA+ LL LMKKQNY
Sbjct: 678 XXXXXXXXXXXXXXXXXXXXXXERLRPWQATYKNLIEKLLGVRKLEEALKLLHLMKKQNY 737

Query: 541 PPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFK 600
           PPFPEPFVQYISKFGTV+DA +FLK LS KEYPS SAYLHIF SFF  GR SEAKDLLFK
Sbjct: 738 PPFPEPFVQYISKFGTVEDAAEFLKALSVKEYPSSSAYLHIFQSFFQVGRESEAKDLLFK 797

Query: 601 CPHHIRKHNEVCKLFGSAESNTTAA 623
           CPHHIRKH+E+CKLFGSA+++   +
Sbjct: 798 CPHHIRKHSEICKLFGSAQNDNATS 822

[Close]
BLAST of CsGy1G001050 vs. TrEMBL
Match: tr|A0A2I4G856|A0A2I4G856_9ROSI (pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Juglans regia OX=51240 GN=LOC109005544 PE=4 SV=1)

HSP 1 Score: 629.4 bits (1622), Expect = 8.7e-177
Identity = 443/628 (70.54%), Postives = 513/628 (81.69%), Query Frame = 0 

Query: 1   MTRRNAIFTSLRLANSFFS-----TRSRYPQVTRFSPSSYVSHQSL-VSHFTINHPVLFF 60
           M R  A  TSLRL NSF S     TR    QV  F  S  +SH+S   S+F   H  LFF
Sbjct: 1   MNRAKATLTSLRLVNSFLSTRCPATRPLASQVNHFYAS--LSHRSFHNSYFLSTHQKLFF 60

Query: 61  SSNPQSLLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGK 120
           SS P S+++L+ +NDWS+ LE +L+   P+LTHETV+Y+LK+LDK P+KAS+FFNW   K
Sbjct: 61  SSKPSSVVELLLSNDWSDELELDLKKSYPSLTHETVIYILKKLDKDPEKASDFFNWVCEK 120

Query: 121 NGSTQSSSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAAD 180
            G   SSS+YS++LRI V  ESMK FW+TLR MKE GFY+DEETY T+LG  +K K A+D
Sbjct: 121 AGFRPSSSVYSLMLRILVNKESMKQFWVTLRKMKEEGFYVDEETYLTLLGQFKKGKMASD 180

Query: 181 ATGLTHFYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKEL 240
            T L HFY+RML +NAM++VV+KVVDIVL S+W+++V  +LEEL I LSDNFVIRVLKEL
Sbjct: 181 VTALKHFYSRMLVENAMENVVKKVVDIVLESEWTDEVEHELEELKIVLSDNFVIRVLKEL 240

Query: 241 RNSPLKALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDID 300
           RN P KAL FF+WVG    Y HN V+YNAIARVLGRDDSIE FW V+EE+K A +E+DID
Sbjct: 241 RNYPSKALKFFYWVGRCSGYGHNAVTYNAIARVLGRDDSIELFWSVVEEIKSAGYEMDID 300

Query: 301 TYIKISRQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAK 360
           TYIKISRQFQK KMM +AVKLYE MMDGP+KPS+QDCS+LLRTI+A DNP+L LV+RVAK
Sbjct: 301 TYIKISRQFQKYKMMEDAVKLYEFMMDGPFKPSVQDCSMLLRTISAGDNPNLDLVFRVAK 360

Query: 361 KFEATGYSLSKAMYDGIHRSLTSTGKFDDAENXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           K+E+ G++LSKA+YDGIHRSLTS G+FD+AEN XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 KYESMGHTLSKAVYDGIHRSLTSAGRFDEAENIXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKK 540
           XXXXXXXXXXXXXXXX           +RPWQATYK +I+ LL + KLEEA+ LLRLMKK
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXRLRPWQATYKNMIEKLLGIGKLEEALNLLRLMKK 540

Query: 541 QNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDL 600
           QN+PPFPEPFVQYI+KFGTV+DA DF K LS KEYPS SAYLH+F SFF EGR+SEAKDL
Sbjct: 541 QNHPPFPEPFVQYIAKFGTVEDAADFFKALSVKEYPSSSAYLHVFKSFFKEGRHSEAKDL 600

Query: 601 LFKCPHHIRKHNEVCKLFGSAESNTTAA 623
           LFKCPHHIRKH+E+ KLFGS  ++  A+
Sbjct: 601 LFKCPHHIRKHSEIGKLFGSTGNDNAAS 626

[Close]
BLAST of CsGy1G001050 vs. TrEMBL
Match: tr|B9RAT8|B9RAT8_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis OX=3988 GN=RCOM_1508610 PE=4 SV=1)

HSP 1 Score: 620.5 bits (1599), Expect = 4.0e-174
Identity = 419/627 (66.83%), Postives = 491/627 (78.31%), Query Frame = 0 

Query: 1   MTRRNAIFTSLRLANSFFSTRSR-----YPQVTRFSPSSYVSHQSLVSHFTINHPVLFFS 60
           M R   I  SLRL+N   STR         QVT F P       S  S +   H  L+ S
Sbjct: 1   MNRARTILVSLRLSNFLLSTRISTTRPFLTQVTHFFPCFLSREHSYTSDYVNIHKKLYSS 60

Query: 61  SNPQSLLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKN 120
           S P SL++L+S NDWS  LET+LE  +P LTHETV+YVLK+LDK P KA +FFNW   +N
Sbjct: 61  SKPSSLVELLSVNDWSPELETQLENSSPLLTHETVIYVLKKLDKDPHKAWDFFNWVCDRN 120

Query: 121 GSTQSSSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADA 180
           G   SS +YS++LRI V+ +SMK FWITLR MKE+GFY DEETY TILGV RK +  +DA
Sbjct: 121 GFKPSSPLYSLMLRILVKKDSMKNFWITLRKMKEQGFYTDEETYLTILGVFRKERMDSDA 180

Query: 181 TGLTHFYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELR 240
               HF++RM+++NAMDSVV+ VV +V  ++WSN+V  +LE +GI L+DNFVIRVLKELR
Sbjct: 181 VAFKHFFDRMVEENAMDSVVKNVVSVVSATEWSNEVEKELEGMGILLTDNFVIRVLKELR 240

Query: 241 NSPLKALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDT 300
           N PLKAL FF+W G    Y+ NT++YNAIARVLGRDDSI  FW V+EEMK+A HE+DIDT
Sbjct: 241 NYPLKALQFFNWAGKCERYECNTITYNAIARVLGRDDSIGEFWSVVEEMKNAGHEMDIDT 300

Query: 301 YIKISRQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKK 360
           YIKISRQFQK+K+MG+AVKLYE MMDGP+KPS+QDCS+LLR+I+AS+ PDL+LV+RV  K
Sbjct: 301 YIKISRQFQKNKLMGDAVKLYEFMMDGPFKPSVQDCSMLLRSISASNYPDLNLVFRVVNK 360

Query: 361 FEATGYSLSKAMYDGIHRSLTSTGKFDDAENXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           +EATG SLSKA+YDGIHRSLTS G FD+A                  XXXXXXXXXXXXX
Sbjct: 361 YEATGNSLSKAVYDGIHRSLTSIGNFDEAAKMMKCMQTAGYEPDNITXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQ 540
           XXXXXXXXXXXXXX  L +++ +KA +RPWQATYK LI+ LLEVRKLEEA+ LLRLMK+ 
Sbjct: 481 XXXXXXXXXXXXXXYTLFMDMVDKARLRPWQATYKLLIEKLLEVRKLEEALNLLRLMKQH 540

Query: 541 NYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLL 600
           N+PPFPEPFVQYIS+FGTV DA DFLK LS KEYPS SAYL++F SFF  GR+SEAKDLL
Sbjct: 541 NHPPFPEPFVQYISRFGTVDDAADFLKALSVKEYPSTSAYLNVFQSFFRAGRHSEAKDLL 600

Query: 601 FKCPHHIRKHNEVCKLFGSAESNTTAA 623
           FKCPHHIRKH ++ +LFGSA++    A
Sbjct: 601 FKCPHHIRKHPKISELFGSAKTEDATA 627

The following BLAST results are available for this feature:
BLAST of CsGy1G001050 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004138087.12.6e-289100.00PREDICTED: pentatricopeptide repeat-containing protein At3g48250, chloroplastic ... [more]
XP_008464511.11.9e-26394.06PREDICTED: pentatricopeptide repeat-containing protein At3g48250, chloroplastic ... [more]
XP_022135299.13.9e-23786.01pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Momordica ... [more]
XP_023530746.13.1e-23486.55pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita ... [more]
XP_022933685.12.9e-23286.20pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita ... [more]
BLAST of CsGy1G001050 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G48250.11.5e-11355.61Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G15980.11.7e-5324.48Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G02490.13.8e-5325.62Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G22670.11.8e-1027.45Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G62470.12.0e-0925.69Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CsGy1G001050 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9STK5|PP269_ARATH2.7e-11255.61Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidop... [more]
sp|Q8LPF1|PP387_ARATH3.1e-5224.48Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidop... [more]
sp|Q9M891|PP208_ARATH6.9e-5225.62Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidop... [more]
sp|Q9LUJ4|PP248_ARATH3.2e-0927.45Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidop... [more]
sp|Q9LZP3|PP293_ARATH3.6e-0825.69Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop... [more]
BLAST of CsGy1G001050 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LNT7|A0A0A0LNT7_CUCSA1.7e-289100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G003530 PE=4 SV=1[more]
tr|A0A1S3CLM3|A0A1S3CLM3_CUCME1.2e-26394.06pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucumis ... [more]
tr|A0A2N9IT19|A0A2N9IT19_FAGSY1.4e-18272.96Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56479 PE=4 SV=1[more]
tr|A0A2I4G856|A0A2I4G856_9ROSI8.7e-17770.54pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Juglans ... [more]
tr|B9RAT8|B9RAT8_RICCO4.0e-17466.83Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis OX=398... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G001050.1CsGy1G001050.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 395..427
e-value: 1.9E-11
score: 43.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 433..470
e-value: 1.8E-7
score: 31.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 437..470
e-value: 9.4E-7
score: 26.6
coord: 401..435
e-value: 9.3E-10
score: 36.1
coord: 508..539
e-value: 0.001
score: 17.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 508..536
e-value: 0.29
score: 11.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 155..192
score: 5.568
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 571..601
score: 5.36
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 257..291
score: 7.794
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 505..539
score: 8.835
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 120..154
score: 6.884
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 364..398
score: 9.01
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 434..468
score: 10.994
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 399..433
score: 13.11
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 469..504
score: 6.577
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 292..326
score: 8.155
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 361..500
e-value: 1.9E-33
score: 118.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 501..629
e-value: 8.8E-6
score: 27.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 59..200
e-value: 6.0E-10
score: 40.7
coord: 218..359
e-value: 2.0E-15
score: 58.6
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 7..623
NoneNo IPR availablePANTHERPTHR24015:SF795SUBFAMILY NOT NAMEDcoord: 7..623

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G001050Cla019234Watermelon (97103) v1cgybwmB092
CsGy1G001050Csa1G003530Cucumber (Chinese Long) v2cgybcuB001
CsGy1G001050MELO3C026258Melon (DHL92) v3.5.1cgybmeB048
CsGy1G001050ClCG06G017440Watermelon (Charleston Gray)cgybwcgB070
CsGy1G001050CSPI01G01010Wild cucumber (PI 183967)cgybcpiB001
CsGy1G001050CmaCh11G000650Cucurbita maxima (Rimu)cgybcmaB028
CsGy1G001050CmoCh11G000680Cucurbita moschata (Rifu)cgybcmoB028
CsGy1G001050Lsi06G015930Bottle gourd (USVL1VR-Ls)cgyblsiB067
CsGy1G001050Cp4.1LG04g15780Cucurbita pepo (Zucchini)cgybcpeB118
CsGy1G001050MELO3C026258.2Melon (DHL92) v3.6.1cgybmedB043
CsGy1G001050CsaV3_1G001090Cucumber (Chinese Long) v3cgybcucB002
CsGy1G001050Cla97C06G127150Watermelon (97103) v2cgybwmbB072
CsGy1G001050Bhi02G000454Wax gourdcgybwgoB076
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G001050Watermelon (Charleston Gray)cgybwcgB002
CsGy1G001050Watermelon (Charleston Gray)cgybwcgB078
CsGy1G001050Watermelon (Charleston Gray)cgybwcgB086
CsGy1G001050Watermelon (97103) v1cgybwmB003
CsGy1G001050Watermelon (97103) v1cgybwmB094
CsGy1G001050Wild cucumber (PI 183967)cgybcpiB033
CsGy1G001050Silver-seed gourdcarcgybB0371
CsGy1G001050Silver-seed gourdcarcgybB0374
CsGy1G001050Silver-seed gourdcarcgybB0442
CsGy1G001050Silver-seed gourdcarcgybB1031
CsGy1G001050Watermelon (97103) v2cgybwmbB076
CsGy1G001050Watermelon (97103) v2cgybwmbB087
CsGy1G001050Wax gourdcgybwgoB008
CsGy1G001050Wax gourdcgybwgoB114
CsGy1G001050Cucumber (Gy14) v2cgybcgybB005
CsGy1G001050Cucurbita maxima (Rimu)cgybcmaB004
CsGy1G001050Cucurbita maxima (Rimu)cgybcmaB045
CsGy1G001050Cucurbita maxima (Rimu)cgybcmaB052
CsGy1G001050Cucurbita maxima (Rimu)cgybcmaB082
CsGy1G001050Cucurbita moschata (Rifu)cgybcmoB005
CsGy1G001050Cucurbita moschata (Rifu)cgybcmoB032
CsGy1G001050Cucurbita moschata (Rifu)cgybcmoB078
CsGy1G001050Cucurbita moschata (Rifu)cgybcmoB121
CsGy1G001050Cucurbita pepo (Zucchini)cgybcpeB052
CsGy1G001050Cucurbita pepo (Zucchini)cgybcpeB053
CsGy1G001050Cucurbita pepo (Zucchini)cgybcpeB062
CsGy1G001050Cucurbita pepo (Zucchini)cgybcpeB106
CsGy1G001050Cucurbita pepo (Zucchini)cgybcpeB117
CsGy1G001050Cucurbita pepo (Zucchini)cgybcpeB126