CsGy1G000460 (gene) Cucumber (Gy14) v2

NameCsGy1G000460
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr1 : 240971 .. 241523 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATATTAGCCTTCTTATTGGTGTTGCCTTTCACACGAGGGGGTTGTTGGAAACACTTTAAGGTGATATGTTTGTTTATTTCAGAAATGGAGATGAAGACAACTATCCAACAACTAAAATAAGAAGTCAATGGCTAGAATATAACCAACTTTCCATCGGATCTTCTTCGTGGGAATGCATTTTGATATATTGTTTATTAAAAAGACAAGTTTATAGATATTGCCCAAAACAAAAACGAAGATCCACAATCTTGGTGCTAAAACCTAATACCTTGTCGCATTTAAACCACTTTTGAAAGCTTAATTCATGGAGAATGGCCTAACATTACCTAAAACGCCTATTTTTTGATCGATATCCCTTTCATGACCTGAGGCAAGAAAAGATACCATTTATATATCTGTATATATAACTAAAAAACAGTTCATTCACACACTATAACAAGCAGGCCTCCCATGGATTCCTCCAACTCAAATAAATTAATGGCTGGATACCATAAAACCCAAGAGAAGCAGCAAAGAGAATATAAGTACAAGCACGAACTAAACTAG

mRNA sequence

ATGGAAGATATTAGCCTTCTTATTGGTGTTGCCTTTCACACGAGGGGAAATGGAGATGAAGACAACTATCCAACAACTAAAATAAGAATTCATTCACACACTATAACAAGCAGGCCTCCCATGGATTCCTCCAACTCAAATAAATTAATGGCTGGATACCATAAAACCCAAGAGAAGCAGCAAAGAGAATATAAGTACAAGCACGAACTAAACTAG

Coding sequence (CDS)

ATGGAAGATATTAGCCTTCTTATTGGTGTTGCCTTTCACACGAGGGGAAATGGAGATGAAGACAACTATCCAACAACTAAAATAAGAATTCATTCACACACTATAACAAGCAGGCCTCCCATGGATTCCTCCAACTCAAATAAATTAATGGCTGGATACCATAAAACCCAAGAGAAGCAGCAAAGAGAATATAAGTACAAGCACGAACTAAACTAG

Protein sequence

MEDISLLIGVAFHTRGNGDEDNYPTTKIRIHSHTITSRPPMDSSNSNKLMAGYHKTQEKQQREYKYKHELN
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G000460.1CsGy1G000460.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..54

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G000460Melon (DHL92) v3.6.1cgybmedB043
CsGy1G000460Cucumber (Gy14) v2cgybcgybB005
CsGy1G000460Cucumber (Gy14) v2cgybcgybB015
CsGy1G000460Cucurbita maxima (Rimu)cgybcmaB004
CsGy1G000460Cucurbita maxima (Rimu)cgybcmaB028
CsGy1G000460Cucurbita maxima (Rimu)cgybcmaB045
CsGy1G000460Cucurbita maxima (Rimu)cgybcmaB081
CsGy1G000460Cucurbita maxima (Rimu)cgybcmaB082
CsGy1G000460Cucurbita moschata (Rifu)cgybcmoB005
CsGy1G000460Cucurbita moschata (Rifu)cgybcmoB028
CsGy1G000460Cucurbita moschata (Rifu)cgybcmoB032
CsGy1G000460Cucurbita moschata (Rifu)cgybcmoB076
CsGy1G000460Cucurbita moschata (Rifu)cgybcmoB078
CsGy1G000460Cucurbita moschata (Rifu)cgybcmoB097
CsGy1G000460Cucurbita pepo (Zucchini)cgybcpeB015
CsGy1G000460Cucurbita pepo (Zucchini)cgybcpeB053
CsGy1G000460Cucurbita pepo (Zucchini)cgybcpeB078
CsGy1G000460Cucurbita pepo (Zucchini)cgybcpeB106
CsGy1G000460Cucurbita pepo (Zucchini)cgybcpeB117
CsGy1G000460Cucurbita pepo (Zucchini)cgybcpeB126
CsGy1G000460Cucumber (Chinese Long) v2cgybcuB001
CsGy1G000460Cucumber (Chinese Long) v2cgybcuB012
CsGy1G000460Cucumber (Chinese Long) v2cgybcuB022
CsGy1G000460Bottle gourd (USVL1VR-Ls)cgyblsiB035
CsGy1G000460Bottle gourd (USVL1VR-Ls)cgyblsiB067
CsGy1G000460Melon (DHL92) v3.5.1cgybmeB020
CsGy1G000460Melon (DHL92) v3.5.1cgybmeB048
CsGy1G000460Melon (DHL92) v3.6.1cgybmedB017
CsGy1G000460Watermelon (Charleston Gray)cgybwcgB048
CsGy1G000460Watermelon (Charleston Gray)cgybwcgB062
CsGy1G000460Watermelon (Charleston Gray)cgybwcgB078
CsGy1G000460Watermelon (97103) v1cgybwmB028
CsGy1G000460Watermelon (97103) v1cgybwmB094
CsGy1G000460Wild cucumber (PI 183967)cgybcpiB001
CsGy1G000460Wild cucumber (PI 183967)cgybcpiB012
CsGy1G000460Wild cucumber (PI 183967)cgybcpiB019
CsGy1G000460Silver-seed gourdcarcgybB0371
CsGy1G000460Silver-seed gourdcarcgybB0442
CsGy1G000460Silver-seed gourdcarcgybB0608
CsGy1G000460Cucumber (Chinese Long) v3cgybcucB002
CsGy1G000460Cucumber (Chinese Long) v3cgybcucB011
CsGy1G000460Cucumber (Chinese Long) v3cgybcucB026
CsGy1G000460Watermelon (97103) v2cgybwmbB076
CsGy1G000460Watermelon (97103) v2cgybwmbB048
CsGy1G000460Watermelon (97103) v2cgybwmbB062
CsGy1G000460Wax gourdcgybwgoB060
CsGy1G000460Wax gourdcgybwgoB077