CsGy1G000260 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G000260
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	ATP/DNA binding protein
Location	Chr1 : 138389 .. 139121 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCCCTAAACAGCACATTGAAGACATAAGGCGAAGCAAGTTTTCAATAGGAGGACCTCCAAATCCCTTAACTGAGGATCTCCATCAGGCTGTAAGGAACCTTTCTGCGGAGCTTTACACCAAGGATGTTCACTTTCTCATGGAGCTTATTCAGGTACCTACAAATAATAATTCATTTCCATGGTCGTTATTAATTCAGTATTTGGATCTGATTATATATATACATTTCGTTCAGAATGCCGAAGACAACGAGTATTCTACCTCCGTAAAGCCGTCGTTAGAGTTCATCATAACATCTAGAGACGTCACTGGAACTGGAGCTGCTACCACACTTTTGATTTTCAACAACGAGATTGGTTTCTCTTTTAAAAACATTGACTCCATTTGCAGCGTTGGTCGCTCCACAAAAAAGAATAACAGGGAACGCGGTTATATTGGCGAGAAAGGTACATACCTCCCCGCCACACCCTATATTCTATACTATTCCATATTATTATATTATATGCTTTGCTTCAATATTGTTTCAACCCCAATGACTAACTTTCCATTGAAGAAAAAAACAAAAAAACAAATAATACATACAAATCTTAACAAGTTTACCTTTTTGGGTTATAAACTTGTTAACATTTCAAATATTAATTATATATATTTTTTACTTTTAGTCTTGGCTTGGATTTACTTTTTACAAATTAGCACTAGTTCCAATATATTTGACTAACAATATCTAA

mRNA sequence

ATGGATTCCCCTAAACAGCACATTGAAGACATAAGGCGAAGCAAGTTTTCAATAGGAGGACCTCCAAATCCCTTAACTGAGGATCTCCATCAGGCTGTAAGGAACCTTTCTGCGGAGCTTTACACCAAGGATGTTCACTTTCTCATGGAGCTTATTCAGGTACCTACAAATAATAATTCATTTCCATGGTCGTTATTAATTCAGTATTTGGATCTGATTATATATATACATTTCGTTCAGAATGCCGAAGACAACGAGTATTCTACCTCCGTAAAGCCGTCGTTAGAGTTCATCATAACATCTAGAGACGTCACTGGAACTGGAGCTGCTACCACACTTTTGATTTTCAACAACGAGATTGGTTTCTCTTTTAAAAACATTGACTCCATTTGCAGCGTTGGTCGCTCCACAAAAAAGAATAACAGGGAACGCGGTTATATTGGCGAGAAAGGTACATACCTCCCCGCCACACCCTATATTCTATACTATTCCATATTATTATATTATATGCTTTGCTTCAATATTGTTTCAACCCCAATGACTAACTTTCCATTGAAGAAAAAAACAAAAAAACAAATAATACATACAAATCTTAACAAGTTTACCTTTTTGGGTTATAAACTTTCTTGGCTTGGATTTACTTTTTACAAATTAGCACTAGTTCCAATATATTTGACTAACAATATCTAA

Coding sequence (CDS)

ATGGATTCCCCTAAACAGCACATTGAAGACATAAGGCGAAGCAAGTTTTCAATAGGAGGACCTCCAAATCCCTTAACTGAGGATCTCCATCAGGCTGTAAGGAACCTTTCTGCGGAGCTTTACACCAAGGATGTTCACTTTCTCATGGAGCTTATTCAGGTACCTACAAATAATAATTCATTTCCATGGTCGTTATTAATTCAGTATTTGGATCTGATTATATATATACATTTCGTTCAGAATGCCGAAGACAACGAGTATTCTACCTCCGTAAAGCCGTCGTTAGAGTTCATCATAACATCTAGAGACGTCACTGGAACTGGAGCTGCTACCACACTTTTGATTTTCAACAACGAGATTGGTTTCTCTTTTAAAAACATTGACTCCATTTGCAGCGTTGGTCGCTCCACAAAAAAGAATAACAGGGAACGCGGTTATATTGGCGAGAAAGGTACATACCTCCCCGCCACACCCTATATTCTATACTATTCCATATTATTATATTATATGCTTTGCTTCAATATTGTTTCAACCCCAATGACTAACTTTCCATTGAAGAAAAAAACAAAAAAACAAATAATACATACAAATCTTAACAAGTTTACCTTTTTGGGTTATAAACTTTCTTGGCTTGGATTTACTTTTTACAAATTAGCACTAGTTCCAATATATTTGACTAACAATATCTAA

Protein sequence

MDSPKQHIEDIRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELIQVPTNNNSFPWSLLIQYLDLIIYIHFVQNAEDNEYSTSVKPSLEFIITSRDVTGTGAATTLLIFNNEIGFSFKNIDSICSVGRSTKKNNRERGYIGEKGTYLPATPYILYYSILLYYMLCFNIVSTPMTNFPLKKKTKKQIIHTNLNKFTFLGYKLSWLGFTFYKLALVPIYLTNNI

Homology

[Close]

BLAST of CsGy1G000260 vs. NCBI nr
Match: XP_011649712.1 (PREDICTED: uncharacterized protein LOC101220895 isoform X1 [Cucumis sativus])

HSP 1 Score: 307.8 bits (787), Expect = 3.2e-80
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MDSPKQHIEDIRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELIQVPTNNNS 60
           MDSPKQHIEDIRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELIQVPTNNNS
Sbjct: 1   MDSPKQHIEDIRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELIQVPTNNNS 60

Query: 61  FPWSLLIQYLDLIIYIHFVQNAEDNEYSTSVKPSLEFIITSRDVTGTGAATTLLIFNNEI 120
           FPWSLLIQYLDLIIYIHFVQNAEDNEYSTSVKPSLEFIITSRDVTGTGAATTLLIFNNEI
Sbjct: 61  FPWSLLIQYLDLIIYIHFVQNAEDNEYSTSVKPSLEFIITSRDVTGTGAATTLLIFNNEI 120

Query: 121 GFSFKNIDSICSVGRSTKKNNRERGYIGEKG 152
           GFSFKNIDSICSVGRSTKKNNRERGYIGEKG
Sbjct: 121 GFSFKNIDSICSVGRSTKKNNRERGYIGEKG 151

[Close]

BLAST of CsGy1G000260 vs. NCBI nr
Match: XP_011649750.1 (PREDICTED: uncharacterized protein LOC101220895 isoform X2 [Cucumis sativus] >KGN63452.1 hypothetical protein Csa_1G000750 [Cucumis sativus])

HSP 1 Score: 236.9 bits (603), Expect = 6.9e-59
Identity = 124/151 (82.12%), Postives = 124/151 (82.12%), Query Frame = 0


Query: 1   MDSPKQHIEDIRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELIQVPTNNNS 60
           MDSPKQHIEDIRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELI        
Sbjct: 1   MDSPKQHIEDIRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELI-------- 60

Query: 61  FPWSLLIQYLDLIIYIHFVQNAEDNEYSTSVKPSLEFIITSRDVTGTGAATTLLIFNNEI 120
                              QNAEDNEYSTSVKPSLEFIITSRDVTGTGAATTLLIFNNEI
Sbjct: 61  -------------------QNAEDNEYSTSVKPSLEFIITSRDVTGTGAATTLLIFNNEI 120

Query: 121 GFSFKNIDSICSVGRSTKKNNRERGYIGEKG 152
           GFSFKNIDSICSVGRSTKKNNRERGYIGEKG
Sbjct: 121 GFSFKNIDSICSVGRSTKKNNRERGYIGEKG 124

[Close]

BLAST of CsGy1G000260 vs. NCBI nr
Match: XP_008464388.1 (PREDICTED: uncharacterized protein LOC103502291 [Cucumis melo])

HSP 1 Score: 223.8 bits (569), Expect = 6.0e-55
Identity = 117/149 (78.52%), Postives = 120/149 (80.54%), Query Frame = 0


Query: 3   SPKQHIEDIRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELIQVPTNNNSFP 62
           SPKQHI++IRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELI          
Sbjct: 5   SPKQHIQEIRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELI---------- 64

Query: 63  WSLLIQYLDLIIYIHFVQNAEDNEYSTSVKPSLEFIITSRDVTGTGAATTLLIFNNEIGF 122
                            QNAEDNEYSTSVKPSLEFIITSRDVTG+GA TTLLIFNNEIGF
Sbjct: 65  -----------------QNAEDNEYSTSVKPSLEFIITSRDVTGSGAGTTLLIFNNEIGF 124

Query: 123 SFKNIDSICSVGRSTKKNNRERGYIGEKG 152
           S KNIDSICSVGRSTKKNNRERGYIGEKG
Sbjct: 125 SSKNIDSICSVGRSTKKNNRERGYIGEKG 126

[Close]

BLAST of CsGy1G000260 vs. NCBI nr
Match: XP_022921426.1 (uncharacterized protein LOC111429710 [Cucurbita moschata])

HSP 1 Score: 220.7 bits (561), Expect = 5.1e-54
Identity = 126/207 (60.87%), Postives = 140/207 (67.63%), Query Frame = 0


Query: 1   MDSPKQHIEDIRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELIQVPTNNNS 60
           M +PKQHIEDIRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELI        
Sbjct: 1   MCTPKQHIEDIRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELI-------- 60

Query: 61  FPWSLLIQYLDLIIYIHFVQNAEDNEYSTSVKPSLEFIITSRDVTGTGAATTLLIFNNEI 120
                              QNAEDNEYSTS+KPSLEFI+TSRDVT TGAA TL+IFNNEI
Sbjct: 61  -------------------QNAEDNEYSTSLKPSLEFIVTSRDVTATGAAATLMIFNNEI 120

Query: 121 GFSFKNIDSICSVGRSTKKNNRERGYIGEKGT------YLPATPYILYYSILLYYMLCFN 180
           GFS KNIDSICSVGRSTKKNNR+RGYIGEKG        + + PYI        Y + FN
Sbjct: 121 GFSAKNIDSICSVGRSTKKNNRKRGYIGEKGIGFKSVFLITSRPYIFSNG----YQIRFN 176

Query: 181 IVSTPM--TNFPLKKKTKKQIIHTNLN 200
               P+    F + +  +   I +N+N
Sbjct: 181 EEPCPVCGVGFVVPEWVEDASILSNIN 176

[Close]

BLAST of CsGy1G000260 vs. NCBI nr
Match: XP_022988601.1 (uncharacterized protein LOC111485804 [Cucurbita maxima])

HSP 1 Score: 219.2 bits (557), Expect = 1.5e-53
Identity = 124/208 (59.62%), Postives = 141/208 (67.79%), Query Frame = 0


Query: 1   MDSPKQHIEDIRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELIQVPTNNNS 60
           M +P+QHIEDIRR+KFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELI        
Sbjct: 1   MCTPRQHIEDIRRTKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELI-------- 60

Query: 61  FPWSLLIQYLDLIIYIHFVQNAEDNEYSTSVKPSLEFIITSRDVTGTGAATTLLIFNNEI 120
                              QNAEDNEYSTS+KPSLEFI+TSRDVT TGAA TL+IFNNE+
Sbjct: 61  -------------------QNAEDNEYSTSLKPSLEFIVTSRDVTATGAAATLMIFNNEV 120

Query: 121 GFSFKNIDSICSVGRSTKKNNRERGYIGEKGT------YLPATPYILYYSILLYYMLCFN 180
           GFS KNIDSICSVGRSTKKNNR+RGYIGEKG        + + PYI        Y + FN
Sbjct: 121 GFSAKNIDSICSVGRSTKKNNRKRGYIGEKGIGFKSVFLITSRPYIFSNG----YHIRFN 177

Query: 181 IVSTPM--TNFPLKKKTKKQIIHTNLNK 201
               P+    F + +  +   I +N+NK
Sbjct: 181 EEPCPLCGVGFVVPEWVEDTSILSNINK 177

[Close]

BLAST of CsGy1G000260 vs. TAIR10
Match: AT3G48770.1 (DNA binding;ATP binding)

HSP 1 Score: 185.3 bits (469), Expect = 4.3e-47
Identity = 99/150 (66.00%), Postives = 106/150 (70.67%), Query Frame = 0


Query: 2   DSPKQHIEDIRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELIQVPTNNNSF 61
           +S KQHIE IRR+KFSIGG  NPLTEDLHQAV+NLSAELY KDVHFLMELI         
Sbjct: 194 ESAKQHIERIRRTKFSIGGAENPLTEDLHQAVKNLSAELYAKDVHFLMELI--------- 253

Query: 62  PWSLLIQYLDLIIYIHFVQNAEDNEYSTSVKPSLEFIITSRDVTGTGAATTLLIFNNEIG 121
                             QNAEDNEY   V PSLEF+ITS D+T TGA  TLLIFNNE G
Sbjct: 254 ------------------QNAEDNEYPEGVDPSLEFVITSEDITNTGAPATLLIFNNEKG 313

Query: 122 FSFKNIDSICSVGRSTKKNNRERGYIGEKG 152
           FS KNI+SICSVGRSTKK NR+ GYIGEKG
Sbjct: 314 FSEKNIESICSVGRSTKKGNRKCGYIGEKG 316

[Close]

BLAST of CsGy1G000260 vs. TAIR10
Match: AT4G13750.1 (Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein)

HSP 1 Score: 75.1 bits (183), Expect = 6.3e-14
Identity = 52/158 (32.91%), Postives = 79/158 (50.00%), Query Frame = 0


Query: 2    DSPKQHIEDIRRSKFSI----GGPPNPLTEDLH----QAVRNLSAELYTKDVHFLMELIQ 61
            D+    I+ IRR +F +     G    + +  H    +A++ LS ELY++D HF++EL  
Sbjct: 1156 DNRASVIDSIRRDEFGLDLTSSGSEMSMLQKQHARLGRALQCLSQELYSQDSHFILEL-- 1215

Query: 62   VPTNNNSFPWSLLIQYLDLIIYIHFVQNAEDNEYSTSVKPSLEFIITSRDVTGTGAATTL 121
                                     VQNA+DN+Y   V+P+L FI+           T +
Sbjct: 1216 -------------------------VQNADDNKYPEHVEPTLTFILQK---------TGI 1275

Query: 122  LIFNNEIGFSFKNIDSICSVGRSTKKNNRERGYIGEKG 152
            ++ NNE GF  +NI ++C VG+STKK +   GYIG+KG
Sbjct: 1276 VVLNNECGFMPENIRALCDVGQSTKKGS--GGYIGKKG 1275

[Close]

BLAST of CsGy1G000260 vs. TAIR10
Match: AT3G28020.1 (BEST Arabidopsis thaliana protein match is: DNA binding;ATP binding (TAIR:AT3G48770.1))

HSP 1 Score: 50.1 bits (118), Expect = 2.2e-06
Identity = 24/34 (70.59%), Postives = 27/34 (79.41%), Query Frame = 0


Query: 2  DSPKQHIEDIRRSKFSIGGPPNPLTEDLHQAVRN 36
          +S KQHI+ IR +KFSIG   NPLTEDLHQA RN
Sbjct: 3  ESTKQHIDLIRETKFSIGRAYNPLTEDLHQAHRN 36

[Close]

BLAST of CsGy1G000260 vs. TrEMBL
Match: tr|A0A0A0LRN6|A0A0A0LRN6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000750 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 4.6e-59
Identity = 124/151 (82.12%), Postives = 124/151 (82.12%), Query Frame = 0


Query: 1   MDSPKQHIEDIRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELIQVPTNNNS 60
           MDSPKQHIEDIRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELI        
Sbjct: 1   MDSPKQHIEDIRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELI-------- 60

Query: 61  FPWSLLIQYLDLIIYIHFVQNAEDNEYSTSVKPSLEFIITSRDVTGTGAATTLLIFNNEI 120
                              QNAEDNEYSTSVKPSLEFIITSRDVTGTGAATTLLIFNNEI
Sbjct: 61  -------------------QNAEDNEYSTSVKPSLEFIITSRDVTGTGAATTLLIFNNEI 120

Query: 121 GFSFKNIDSICSVGRSTKKNNRERGYIGEKG 152
           GFSFKNIDSICSVGRSTKKNNRERGYIGEKG
Sbjct: 121 GFSFKNIDSICSVGRSTKKNNRERGYIGEKG 124

[Close]

BLAST of CsGy1G000260 vs. TrEMBL
Match: tr|A0A1S3CMW6|A0A1S3CMW6_CUCME (uncharacterized protein LOC103502291 OS=Cucumis melo OX=3656 GN=LOC103502291 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.0e-55
Identity = 117/149 (78.52%), Postives = 120/149 (80.54%), Query Frame = 0


Query: 3   SPKQHIEDIRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELIQVPTNNNSFP 62
           SPKQHI++IRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELI          
Sbjct: 5   SPKQHIQEIRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELI---------- 64

Query: 63  WSLLIQYLDLIIYIHFVQNAEDNEYSTSVKPSLEFIITSRDVTGTGAATTLLIFNNEIGF 122
                            QNAEDNEYSTSVKPSLEFIITSRDVTG+GA TTLLIFNNEIGF
Sbjct: 65  -----------------QNAEDNEYSTSVKPSLEFIITSRDVTGSGAGTTLLIFNNEIGF 124

Query: 123 SFKNIDSICSVGRSTKKNNRERGYIGEKG 152
           S KNIDSICSVGRSTKKNNRERGYIGEKG
Sbjct: 125 SSKNIDSICSVGRSTKKNNRERGYIGEKG 126

[Close]

BLAST of CsGy1G000260 vs. TrEMBL
Match: tr|A0A2I0JGZ1|A0A2I0JGZ1_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_024717 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.3e-47
Identity = 105/164 (64.02%), Postives = 116/164 (70.73%), Query Frame = 0


Query: 3   SPKQHIEDIRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELIQVPTNNNSFP 62
           +PK+HIE +RRSKFSIGGPPNPLTEDLHQAV+NLSAELY KDVHFLMELI          
Sbjct: 12  TPKEHIEHLRRSKFSIGGPPNPLTEDLHQAVKNLSAELYAKDVHFLMELI---------- 71

Query: 63  WSLLIQYLDLIIYIHFVQNAEDNEYSTSVKPSLEFIITSRDVTGTGAATTLLIFNNEIGF 122
                            QNAEDNEY   VKPSLEF+ITSRD+T TGA  TLLIFNNE GF
Sbjct: 72  -----------------QNAEDNEYPEGVKPSLEFVITSRDITATGALATLLIFNNEKGF 131

Query: 123 SFKNIDSICSVGRSTKKNNRERGYIGEKGT------YLPATPYI 161
           + +NIDSICSVGRSTKK NR++GYIGEKG        + A PYI
Sbjct: 132 APRNIDSICSVGRSTKKGNRKQGYIGEKGIGFKSVFLITAQPYI 148

[Close]

BLAST of CsGy1G000260 vs. TrEMBL
Match: tr|A0A218Y056|A0A218Y056_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr006550 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.3e-47
Identity = 105/164 (64.02%), Postives = 116/164 (70.73%), Query Frame = 0


Query: 3   SPKQHIEDIRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELIQVPTNNNSFP 62
           +PK+HIE +RRSKFSIGGPPNPLTEDLHQAV+NLSAELY KDVHFLMELI          
Sbjct: 12  TPKEHIEHLRRSKFSIGGPPNPLTEDLHQAVKNLSAELYAKDVHFLMELI---------- 71

Query: 63  WSLLIQYLDLIIYIHFVQNAEDNEYSTSVKPSLEFIITSRDVTGTGAATTLLIFNNEIGF 122
                            QNAEDNEY   VKPSLEF+ITSRD+T TGA  TLLIFNNE GF
Sbjct: 72  -----------------QNAEDNEYPEGVKPSLEFVITSRDITATGALATLLIFNNEKGF 131

Query: 123 SFKNIDSICSVGRSTKKNNRERGYIGEKGT------YLPATPYI 161
           + +NIDSICSVGRSTKK NR++GYIGEKG        + A PYI
Sbjct: 132 APRNIDSICSVGRSTKKGNRKQGYIGEKGIGFKSVFLITAQPYI 148

[Close]

BLAST of CsGy1G000260 vs. TrEMBL
Match: tr|A0A1R3IZN7|A0A1R3IZN7_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_08596 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.0e-47
Identity = 108/164 (65.85%), Postives = 114/164 (69.51%), Query Frame = 0


Query: 3   SPKQHIEDIRRSKFSIGGPPNPLTEDLHQAVRNLSAELYTKDVHFLMELIQVPTNNNSFP 62
           +PKQHIE IR+ KFSIGG  NPLTEDLHQAVRNLSAELYTKDVHFLMELI          
Sbjct: 4   TPKQHIEQIRKGKFSIGGEANPLTEDLHQAVRNLSAELYTKDVHFLMELI---------- 63

Query: 63  WSLLIQYLDLIIYIHFVQNAEDNEYSTSVKPSLEFIITSRDVTGTGAATTLLIFNNEIGF 122
                            QNAEDNEYS  VKPSLEF+ITSRD+T TGA  TLLIFNNE GF
Sbjct: 64  -----------------QNAEDNEYSDGVKPSLEFVITSRDITATGAPATLLIFNNEKGF 123

Query: 123 SFKNIDSICSVGRSTKKNNRERGYIGEKGT------YLPATPYI 161
           S KNI+SICSVGRSTKK  RERGYIGEKG        + A PYI
Sbjct: 124 SSKNIESICSVGRSTKKAYRERGYIGEKGIGFKSVFLITAQPYI 140

The following BLAST results are available for this feature:

BLAST of CsGy1G000260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649712.1	3.2e-80	100.00	PREDICTED: uncharacterized protein LOC101220895 isoform X1 [Cucumis sativus]	[more]
XP_011649750.1	6.9e-59	82.12	PREDICTED: uncharacterized protein LOC101220895 isoform X2 [Cucumis sativus] >KG...	[more]
XP_008464388.1	6.0e-55	78.52	PREDICTED: uncharacterized protein LOC103502291 [Cucumis melo]	[more]
XP_022921426.1	5.1e-54	60.87	uncharacterized protein LOC111429710 [Cucurbita moschata]	[more]
XP_022988601.1	1.5e-53	59.62	uncharacterized protein LOC111485804 [Cucurbita maxima]	[more]

BLAST of CsGy1G000260 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G48770.1	4.3e-47	66.00	DNA binding;ATP binding	[more]
AT4G13750.1	6.3e-14	32.91	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein	[more]
AT3G28020.1	2.2e-06	70.59	BEST Arabidopsis thaliana protein match is: DNA binding;ATP binding (TAIR:AT3G48...	[more]

BLAST of CsGy1G000260 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy1G000260 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LRN6\|A0A0A0LRN6_CUCSA	4.6e-59	82.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000750 PE=4 SV=1	[more]
tr\|A0A1S3CMW6\|A0A1S3CMW6_CUCME	4.0e-55	78.52	uncharacterized protein LOC103502291 OS=Cucumis melo OX=3656 GN=LOC103502291 PE=...	[more]
tr\|A0A2I0JGZ1\|A0A2I0JGZ1_PUNGR	2.3e-47	64.02	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_024717 PE=4 SV=1	[more]
tr\|A0A218Y056\|A0A218Y056_PUNGR	2.3e-47	64.02	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr006550 PE=4 SV=1	[more]
tr\|A0A1R3IZN7\|A0A1R3IZN7_COCAP	4.0e-47	65.85	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_08596 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036890	HATPase_C_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G000260.1	CsGy1G000260.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036890	Histidine kinase/HSP90-like ATPase superfamily	GENE3D	G3DSA:3.30.565.10		coord: 25..152 e-value: 2.1E-5 score: 25.9
None	No IPR available	PANTHER	PTHR32387	FAMILY NOT NAMED	coord: 1..151
None	No IPR available	PANTHER	PTHR32387:SF3	ATP/DNA BINDING PROTEIN	coord: 1..151

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G000260	Cla019306	Watermelon (97103) v1	cgybwmB094
CsGy1G000260	Csa1G000750	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G000260	MELO3C026178	Melon (DHL92) v3.5.1	cgybmeB048
CsGy1G000260	ClCG06G018190	Watermelon (Charleston Gray)	cgybwcgB078
CsGy1G000260	CSPI01G00250	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G000260	CmaCh10G000350	Cucurbita maxima (Rimu)	cgybcmaB004
CsGy1G000260	CmoCh10G000310	Cucurbita moschata (Rifu)	cgybcmoB005
CsGy1G000260	Lsi06G016670	Bottle gourd (USVL1VR-Ls)	cgyblsiB067
CsGy1G000260	Cp4.1LG18g09390	Cucurbita pepo (Zucchini)	cgybcpeB053
CsGy1G000260	MELO3C026178.2	Melon (DHL92) v3.6.1	cgybmedB043
CsGy1G000260	CsaV3_1G000240	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G000260	Cla97C06G127960	Watermelon (97103) v2	cgybwmbB076
CsGy1G000260	Bhi02G000488	Wax gourd	cgybwgoB077
CsGy1G000260	Carg10257	Silver-seed gourd	carcgybB0371

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G000260	Cucumber (Gy14) v2	cgybcgybB005
CsGy1G000260	Cucurbita maxima (Rimu)	cgybcmaB028
CsGy1G000260	Cucurbita maxima (Rimu)	cgybcmaB045
CsGy1G000260	Cucurbita maxima (Rimu)	cgybcmaB081
CsGy1G000260	Cucurbita moschata (Rifu)	cgybcmoB028
CsGy1G000260	Cucurbita moschata (Rifu)	cgybcmoB032
CsGy1G000260	Cucurbita moschata (Rifu)	cgybcmoB076
CsGy1G000260	Cucurbita moschata (Rifu)	cgybcmoB097
CsGy1G000260	Cucurbita pepo (Zucchini)	cgybcpeB015
CsGy1G000260	Cucurbita pepo (Zucchini)	cgybcpeB078
CsGy1G000260	Cucurbita pepo (Zucchini)	cgybcpeB117
CsGy1G000260	Cucurbita pepo (Zucchini)	cgybcpeB126
CsGy1G000260	Cucumber (Chinese Long) v2	cgybcuB012
CsGy1G000260	Bottle gourd (USVL1VR-Ls)	cgyblsiB035
CsGy1G000260	Melon (DHL92) v3.5.1	cgybmeB020
CsGy1G000260	Melon (DHL92) v3.6.1	cgybmedB017
CsGy1G000260	Watermelon (Charleston Gray)	cgybwcgB048
CsGy1G000260	Watermelon (97103) v1	cgybwmB028
CsGy1G000260	Wild cucumber (PI 183967)	cgybcpiB012
CsGy1G000260	Silver-seed gourd	carcgybB0608
CsGy1G000260	Cucumber (Chinese Long) v3	cgybcucB011
CsGy1G000260	Watermelon (97103) v2	cgybwmbB048
CsGy1G000260	Wax gourd	cgybwgoB060