Cp4.1LG20g07810 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG20g07810
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLaccase
LocationCp4.1LG20 : 7974148 .. 7975545 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAATGGTTCGACAGAGACCCGATAAGTGTGCTGCGGCAGGCGCTTTTCACTGGCGCGGCTCCTAATGTCTCTGATGCCTACACCATCAACGGCCAGCCCGGCGACTTCTACCGCTGCTCCGGCAAAGGTTGGTGCTTGGTGCTTGGTGCTGTCTTCTTTATTACAAATTTGGAATGGGTTTTGGTTACGATGAAACAAAAAGGGTTTTGGTGTTTGATATTTGGCAGAGACGGTGAGATTCGCGGTGGATTCCGGCGAGACAATTCTTTTGAGGATTATAAACTCAGCATTGAATCAGGAGCTGTTCTTCTCCGTCGCTAACCACCAATTGACGGTGGTGGCCGTCGACGCGTCTTACACCAAACCATTCACAACAAATGTGATTATGATCGGACCCGGACAGACCACCGATGTCCTTCTGACAGCCAACCAACAACCAGCTCACTACTACATGGCTGCCACCGCCTACAACACCGCCCTCAACGCCGCCTTCGACAACACCACCACCACTGCCATCCTCGAATACAAAAATTGCCAGCAACACCAGCAGCACCCACCGCGACCCATTATGGCTCAGCTCCCAAATTTCAACGACACCCCCACCGCCACCCGATTCACCTCCCAACTCCGGAGCCCAAACAGAGTGAACGTCCCGACCCAAATCGACGACAGCTTACTCTTCACCGTCGGATTAGGCCTCATCAACTGCACGAACCCAAACAGCCCCCGCTGCCAAGGCCCCAACGGCACTCGCTTCGCCGCCAGCATCAACAACGTCTCCTTCGTTTTCCCAAAATCCAATTCCATCATGCAAGCCTTTTACCAGGGCGTTCCGGGGGTTTTCACCACCGACTTTCCGCCGGTTCCGCCGCTGCAATTTGATTACACAGGGAACGTGAGCAGAGGGCTTTGGCAGCCCGGTCGAGGGACCAAGGGTTATAGACTTAAATATGGGTCAAATGTGCAGATTGTGCTGCAGGACACCAGCATTGTAACCACCGAAGATCACCCGATGCATCTCCATGGCTACCATTTCTACGTCGTTGGTTCGGGTTTTGGCAATTTCAACCCAGCCACGGATCCGGCGAGGTTCAATCTCATCGACCCACCGGTGAGAAACACGATTGGAACGCCCCCCGGTGGTTGGGTTGCCATCCGATTCGTGGCTGATAATCCAGGTAAGCTCCGATTGCAACAAATAAATGTGTGTTCTATATAATTAAATGGTTTTGAATTCCCCGTAATAAATGGATTGCGCGCTGAAAAACAGGGGCTTGGTTGATGCATTGCCATATAGACTCGCACCTTGCTTGGGGATTGGCGATGGTGTTTCTGGTTGAGAATGGCGAAGGAGAGCTGCAGTCTGTTCTTCCTCCCCCGCCGGATCTGCCTCCTTGT

mRNA sequence

GAATGGTTCGACAGAGACCCGATAAGTGTGCTGCGGCAGGCGCTTTTCACTGGCGCGGCTCCTAATGTCTCTGATGCCTACACCATCAACGGCCAGCCCGGCGACTTCTACCGCTGCTCCGGCAAAGGGGCTTGGTTGATGCATTGCCATATAGACTCGCACCTTGCTTGGGGATTGGCGATGGTGTTTCTGGTTGAGAATGGCGAAGGAGAGCTGCAGTCTGTTCTTCCTCCCCCGCCGGATCTGCCTCCTTGT

Coding sequence (CDS)

GAATGGTTCGACAGAGACCCGATAAGTGTGCTGCGGCAGGCGCTTTTCACTGGCGCGGCTCCTAATGTCTCTGATGCCTACACCATCAACGGCCAGCCCGGCGACTTCTACCGCTGCTCCGGCAAAGGGGCTTGGTTGATGCATTGCCATATAGACTCGCACCTTGCTTGGGGATTGGCGATGGTGTTTCTGGTTGAGAATGGCGAAGGAGAGCTGCAGTCTGTTCTTCCTCCCCCGCCGGATCTGCCTCCTTGT

Protein sequence

EWFDRDPISVLRQALFTGAAPNVSDAYTINGQPGDFYRCSGKGAWLMHCHIDSHLAWGLAMVFLVENGEGELQSVLPPPPDLPPC
Homology
[Close]
BLAST of Cp4.1LG20g07810 vs. Swiss-Prot
Match: LAC13_ARATH (Laccase-13 OS=Arabidopsis thaliana GN=LAC13 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 5.2e-16
Identity = 40/62 (64.52%), Postives = 44/62 (70.97%), Query Frame = 1 

Query: 28  TINGQPGDF----YRCSGKGAWLMHCHIDSHLAWGLAMVFLVENGEGELQSVLPPPPDLP 86
           TI   PG +    +  +  GAWLMHCHIDSH+ WGLAMVFLVENGEG LQSV  PP DLP
Sbjct: 508 TIGTPPGGWVAIRFVANNPGAWLMHCHIDSHIFWGLAMVFLVENGEGHLQSVQSPPLDLP 567

[Close]
BLAST of Cp4.1LG20g07810 vs. Swiss-Prot
Match: LAC3_ARATH (Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=2)

HSP 1 Score: 82.8 bits (203), Expect = 2.0e-15
Identity = 39/62 (62.90%), Postives = 42/62 (67.74%), Query Frame = 1 

Query: 28  TINGQPGDF----YRCSGKGAWLMHCHIDSHLAWGLAMVFLVENGEGELQSVLPPPPDLP 86
           TI   PG +    +     GAW MHCHIDSHL WGLAMVFLVENG G+LQSV  PP DLP
Sbjct: 509 TIGTPPGGWVAIRFVADNPGAWFMHCHIDSHLGWGLAMVFLVENGRGQLQSVQAPPLDLP 568

[Close]
BLAST of Cp4.1LG20g07810 vs. Swiss-Prot
Match: LAC17_ORYSJ (Putative laccase-17 OS=Oryza sativa subsp. japonica GN=LAC17 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.4e-13
Identity = 32/57 (56.14%), Postives = 39/57 (68.42%), Query Frame = 1 

Query: 29  INGQPGDFYRCSGKGAWLMHCHIDSHLAWGLAMVFLVENGEGELQSVLPPPPDLPPC 86
           +NG     +     G WLMHCH+D H+ WGLAM FLV++G GELQS+  PPPDLP C
Sbjct: 511 VNGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVDDGVGELQSLEAPPPDLPLC 567

[Close]
BLAST of Cp4.1LG20g07810 vs. Swiss-Prot
Match: LAC23_ORYSJ (Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC23 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.4e-13
Identity = 32/57 (56.14%), Postives = 39/57 (68.42%), Query Frame = 1 

Query: 29  INGQPGDFYRCSGKGAWLMHCHIDSHLAWGLAMVFLVENGEGELQSVLPPPPDLPPC 86
           +NG     +     G WLMHCH+D H+ WGLAM FLV++G GELQS+  PPPDLP C
Sbjct: 511 VNGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVDDGVGELQSLEAPPPDLPLC 567

[Close]
BLAST of Cp4.1LG20g07810 vs. Swiss-Prot
Match: LAC4_ARATH (Laccase-4 OS=Arabidopsis thaliana GN=IRX12 PE=2 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 4.1e-13
Identity = 29/49 (59.18%), Postives = 34/49 (69.39%), Query Frame = 1 

Query: 37  YRCSGKGAWLMHCHIDSHLAWGLAMVFLVENGEGELQSVLPPPPDLPPC 86
           +R    G W MHCH++ H  WGL M FLVENG+G  QS+LPPP DLP C
Sbjct: 510 FRADNPGVWFMHCHLEVHTTWGLKMAFLVENGKGPNQSILPPPKDLPKC 558

[Close]
BLAST of Cp4.1LG20g07810 vs. TrEMBL
Match: A0A103XNP2_CYNCS (Cupredoxin (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_003833 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.7e-27
Identity = 60/85 (70.59%), Postives = 66/85 (77.65%), Query Frame = 1 

Query: 1   EWFDRDPISVLRQALFTGAAPNVSDAYTINGQPGDFYRCSGKGAWLMHCHIDSHLAWGLA 60
           EW+DR  ISVLRQALFTGAAPNVSDA TINGQPG          WLMHCHID+HLAWG A
Sbjct: 103 EWWDRKVISVLRQALFTGAAPNVSDALTINGQPG---------VWLMHCHIDTHLAWGFA 162

Query: 61  MVFLVENGEGELQSVLPPPPDLPPC 86
           M F+VENG GE +++LPPP DLP C
Sbjct: 163 MSFIVENGVGESETLLPPPSDLPQC 178

[Close]
BLAST of Cp4.1LG20g07810 vs. TrEMBL
Match: B8AZ35_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20213 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 4.0e-23
Identity = 46/85 (54.12%), Postives = 61/85 (71.76%), Query Frame = 1 

Query: 1   EWFDRDPISVLRQALFTGAAPNVSDAYTINGQPGDFYRCSGKGAWLMHCHIDSHLAWGLA 60
           EW++ D  +V+ QAL TG  PN+SDAYT+NG PG  Y CS +G W+MHCH+D HL+WGL+
Sbjct: 88  EWWNNDTEAVISQALQTGGGPNISDAYTLNGLPGPLYNCSAQGVWIMHCHLDVHLSWGLS 147

Query: 61  MVFLVENGEGELQSVLPPPPDLPPC 86
           M +LV +G    Q + PPP D+P C
Sbjct: 148 MAWLVNDGPLPNQKLPPPPSDIPMC 172

[Close]
BLAST of Cp4.1LG20g07810 vs. TrEMBL
Match: A0A059CUX3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03118 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 5.8e-22
Identity = 45/85 (52.94%), Postives = 56/85 (65.88%), Query Frame = 1 

Query: 1   EWFDRDPISVLRQALFTGAAPNVSDAYTINGQPGDFYRCSGKGAWLMHCHIDSHLAWGLA 60
           EW+ +  + V  + L  G  PNVSDAYTINGQPGD Y CS +G W MHCHI+ H+ WG+ 
Sbjct: 164 EWWKKPIMEVYHEMLIIGGDPNVSDAYTINGQPGDLYPCSMQGVWFMHCHIERHMTWGMD 223

Query: 61  MVFLVENGEGELQSVLPPPPDLPPC 86
             F+V NG      +L PPPD+PPC
Sbjct: 224 TAFIVRNGVPLNTHLLSPPPDMPPC 248

[Close]
BLAST of Cp4.1LG20g07810 vs. TrEMBL
Match: A0A0K9S221_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_003940 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.9e-21
Identity = 44/85 (51.76%), Postives = 59/85 (69.41%), Query Frame = 1 

Query: 1   EWFDRDPISVLRQALFTGAAPNVSDAYTINGQPGDFYRCSGKGAWLMHCHIDSHLAWGLA 60
           EW++ D  ++++Q    G  PN+SDA+TING+PG  + CS K  W MHCH++ H  WGL 
Sbjct: 171 EWWNGDVETLVKQGDQMGLPPNISDAHTINGKPGPMFPCSEKRVWFMHCHLELHTGWGLK 230

Query: 61  MVFLVENGEGELQSVLPPPPDLPPC 86
           + F+VE+G G   SVLPPP DLPPC
Sbjct: 231 IAFVVEDGPGPEYSVLPPPKDLPPC 255

[Close]
BLAST of Cp4.1LG20g07810 vs. TrEMBL
Match: A2WSY7_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_02977 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.2e-20
Identity = 47/86 (54.65%), Postives = 58/86 (67.44%), Query Frame = 1 

Query: 1   EWFDRDPISVLRQALFTGAAPNVSDAYTINGQPGDFYR-CSGKGAWLMHCHIDSHLAWGL 60
           EW+  D  +V RQ    G APN+SDA+TING+PG     CS K  W +HCH++ H +WGL
Sbjct: 168 EWWHADVETVERQGSMLGMAPNMSDAHTINGKPGPLVPFCSEKRVWFLHCHLEVHTSWGL 227

Query: 61  AMVFLVENGEGELQSVLPPPPDLPPC 86
            M FLVE+G G  +SVLPPP DLP C
Sbjct: 228 KMAFLVEDGSGPDESVLPPPKDLPKC 253

[Close]
BLAST of Cp4.1LG20g07810 vs. TAIR10
Match: AT5G07130.1 (AT5G07130.1 laccase 13)

HSP 1 Score: 84.7 bits (208), Expect = 2.9e-17
Identity = 40/62 (64.52%), Postives = 44/62 (70.97%), Query Frame = 1 

Query: 28  TINGQPGDF----YRCSGKGAWLMHCHIDSHLAWGLAMVFLVENGEGELQSVLPPPPDLP 86
           TI   PG +    +  +  GAWLMHCHIDSH+ WGLAMVFLVENGEG LQSV  PP DLP
Sbjct: 508 TIGTPPGGWVAIRFVANNPGAWLMHCHIDSHIFWGLAMVFLVENGEGHLQSVQSPPLDLP 567

[Close]
BLAST of Cp4.1LG20g07810 vs. TAIR10
Match: AT2G30210.1 (AT2G30210.1 laccase 3)

HSP 1 Score: 82.8 bits (203), Expect = 1.1e-16
Identity = 39/62 (62.90%), Postives = 42/62 (67.74%), Query Frame = 1 

Query: 28  TINGQPGDF----YRCSGKGAWLMHCHIDSHLAWGLAMVFLVENGEGELQSVLPPPPDLP 86
           TI   PG +    +     GAW MHCHIDSHL WGLAMVFLVENG G+LQSV  PP DLP
Sbjct: 509 TIGTPPGGWVAIRFVADNPGAWFMHCHIDSHLGWGLAMVFLVENGRGQLQSVQAPPLDLP 568

[Close]
BLAST of Cp4.1LG20g07810 vs. TAIR10
Match: AT2G38080.1 (AT2G38080.1 Laccase/Diphenol oxidase family protein)

HSP 1 Score: 75.1 bits (183), Expect = 2.3e-14
Identity = 29/49 (59.18%), Postives = 34/49 (69.39%), Query Frame = 1 

Query: 37  YRCSGKGAWLMHCHIDSHLAWGLAMVFLVENGEGELQSVLPPPPDLPPC 86
           +R    G W MHCH++ H  WGL M FLVENG+G  QS+LPPP DLP C
Sbjct: 510 FRADNPGVWFMHCHLEVHTTWGLKMAFLVENGKGPNQSILPPPKDLPKC 558

[Close]
BLAST of Cp4.1LG20g07810 vs. TAIR10
Match: AT2G40370.1 (AT2G40370.1 laccase 5)

HSP 1 Score: 74.3 bits (181), Expect = 4.0e-14
Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 1 

Query: 29  INGQPGDFYRCSGKGAWLMHCHIDSHLAWGLAMVFLVENGEGELQSVLPPPPDLPPC 86
           +NG     +     G W+MHCH+D+H++WGLAM FLVENG G LQ++  PP DLP C
Sbjct: 524 VNGWAVIRFIADNPGVWIMHCHLDAHISWGLAMAFLVENGNGVLQTIEQPPHDLPVC 580

[Close]
BLAST of Cp4.1LG20g07810 vs. TAIR10
Match: AT5G01190.1 (AT5G01190.1 laccase 10)

HSP 1 Score: 72.8 bits (177), Expect = 1.2e-13
Identity = 28/49 (57.14%), Postives = 33/49 (67.35%), Query Frame = 1 

Query: 37  YRCSGKGAWLMHCHIDSHLAWGLAMVFLVENGEGELQSVLPPPPDLPPC 86
           +R    G W MHCH++ H  WGL M FLVENG+G  QS+ PPP DLP C
Sbjct: 510 FRADNPGVWFMHCHLEVHTTWGLKMAFLVENGKGPNQSIRPPPSDLPKC 558

[Close]
BLAST of Cp4.1LG20g07810 vs. NCBI nr
Match: gi|976906687|gb|KVH94097.1| (Cupredoxin, partial [Cynara cardunculus var. scolymus])

HSP 1 Score: 129.0 bits (323), Expect = 3.9e-27
Identity = 60/85 (70.59%), Postives = 66/85 (77.65%), Query Frame = 1 

Query: 1   EWFDRDPISVLRQALFTGAAPNVSDAYTINGQPGDFYRCSGKGAWLMHCHIDSHLAWGLA 60
           EW+DR  ISVLRQALFTGAAPNVSDA TINGQPG          WLMHCHID+HLAWG A
Sbjct: 103 EWWDRKVISVLRQALFTGAAPNVSDALTINGQPG---------VWLMHCHIDTHLAWGFA 162

Query: 61  MVFLVENGEGELQSVLPPPPDLPPC 86
           M F+VENG GE +++LPPP DLP C
Sbjct: 163 MSFIVENGVGESETLLPPPSDLPQC 178

[Close]
BLAST of Cp4.1LG20g07810 vs. NCBI nr
Match: gi|218196921|gb|EEC79348.1| (hypothetical protein OsI_20213 [Oryza sativa Indica Group])

HSP 1 Score: 115.2 bits (287), Expect = 5.8e-23
Identity = 46/85 (54.12%), Postives = 61/85 (71.76%), Query Frame = 1 

Query: 1   EWFDRDPISVLRQALFTGAAPNVSDAYTINGQPGDFYRCSGKGAWLMHCHIDSHLAWGLA 60
           EW++ D  +V+ QAL TG  PN+SDAYT+NG PG  Y CS +G W+MHCH+D HL+WGL+
Sbjct: 88  EWWNNDTEAVISQALQTGGGPNISDAYTLNGLPGPLYNCSAQGVWIMHCHLDVHLSWGLS 147

Query: 61  MVFLVENGEGELQSVLPPPPDLPPC 86
           M +LV +G    Q + PPP D+P C
Sbjct: 148 MAWLVNDGPLPNQKLPPPPSDIPMC 172

[Close]
BLAST of Cp4.1LG20g07810 vs. NCBI nr
Match: gi|629117080|gb|KCW81755.1| (hypothetical protein EUGRSUZ_C03118 [Eucalyptus grandis])

HSP 1 Score: 111.3 bits (277), Expect = 8.3e-22
Identity = 45/85 (52.94%), Postives = 56/85 (65.88%), Query Frame = 1 

Query: 1   EWFDRDPISVLRQALFTGAAPNVSDAYTINGQPGDFYRCSGKGAWLMHCHIDSHLAWGLA 60
           EW+ +  + V  + L  G  PNVSDAYTINGQPGD Y CS +G W MHCHI+ H+ WG+ 
Sbjct: 164 EWWKKPIMEVYHEMLIIGGDPNVSDAYTINGQPGDLYPCSMQGVWFMHCHIERHMTWGMD 223

Query: 61  MVFLVENGEGELQSVLPPPPDLPPC 86
             F+V NG      +L PPPD+PPC
Sbjct: 224 TAFIVRNGVPLNTHLLSPPPDMPPC 248

[Close]
BLAST of Cp4.1LG20g07810 vs. NCBI nr
Match: gi|902239850|gb|KNA25758.1| (hypothetical protein SOVF_003940 [Spinacia oleracea])

HSP 1 Score: 108.2 bits (269), Expect = 7.0e-21
Identity = 44/85 (51.76%), Postives = 59/85 (69.41%), Query Frame = 1 

Query: 1   EWFDRDPISVLRQALFTGAAPNVSDAYTINGQPGDFYRCSGKGAWLMHCHIDSHLAWGLA 60
           EW++ D  ++++Q    G  PN+SDA+TING+PG  + CS K  W MHCH++ H  WGL 
Sbjct: 171 EWWNGDVETLVKQGDQMGLPPNISDAHTINGKPGPMFPCSEKRVWFMHCHLELHTGWGLK 230

Query: 61  MVFLVENGEGELQSVLPPPPDLPPC 86
           + F+VE+G G   SVLPPP DLPPC
Sbjct: 231 IAFVVEDGPGPEYSVLPPPKDLPPC 255

[Close]
BLAST of Cp4.1LG20g07810 vs. NCBI nr
Match: gi|125526969|gb|EAY75083.1| (hypothetical protein OsI_02977 [Oryza sativa Indica Group])

HSP 1 Score: 105.5 bits (262), Expect = 4.6e-20
Identity = 47/86 (54.65%), Postives = 58/86 (67.44%), Query Frame = 1 

Query: 1   EWFDRDPISVLRQALFTGAAPNVSDAYTINGQPGDFYR-CSGKGAWLMHCHIDSHLAWGL 60
           EW+  D  +V RQ    G APN+SDA+TING+PG     CS K  W +HCH++ H +WGL
Sbjct: 168 EWWHADVETVERQGSMLGMAPNMSDAHTINGKPGPLVPFCSEKRVWFLHCHLEVHTSWGL 227

Query: 61  AMVFLVENGEGELQSVLPPPPDLPPC 86
            M FLVE+G G  +SVLPPP DLP C
Sbjct: 228 KMAFLVEDGSGPDESVLPPPKDLPKC 253

The following BLAST results are available for this feature:
BLAST of Cp4.1LG20g07810 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LAC13_ARATH5.2e-1664.52Laccase-13 OS=Arabidopsis thaliana GN=LAC13 PE=2 SV=1[more]
LAC3_ARATH2.0e-1562.90Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=2[more]
LAC17_ORYSJ2.4e-1356.14Putative laccase-17 OS=Oryza sativa subsp. japonica GN=LAC17 PE=3 SV=1[more]
LAC23_ORYSJ2.4e-1356.14Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC23 PE=3 SV=1[more]
LAC4_ARATH4.1e-1359.18Laccase-4 OS=Arabidopsis thaliana GN=IRX12 PE=2 SV=2[more]
BLAST of Cp4.1LG20g07810 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A103XNP2_CYNCS2.7e-2770.59Cupredoxin (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_003833 PE=4 SV... [more]
B8AZ35_ORYSI4.0e-2354.12Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20213 PE=3... [more]
A0A059CUX3_EUCGR5.8e-2252.94Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03118 PE=3 SV=1[more]
A0A0K9S221_SPIOL4.9e-2151.76Uncharacterized protein OS=Spinacia oleracea GN=SOVF_003940 PE=3 SV=1[more]
A2WSY7_ORYSI3.2e-2054.65Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_02977 PE=3... [more]
BLAST of Cp4.1LG20g07810 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07130.12.9e-1764.52 laccase 13[more]
AT2G30210.11.1e-1662.90 laccase 3[more]
AT2G38080.12.3e-1459.18 Laccase/Diphenol oxidase family protein[more]
AT2G40370.14.0e-1452.63 laccase 5[more]
AT5G01190.11.2e-1357.14 laccase 10[more]
BLAST of Cp4.1LG20g07810 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|976906687|gb|KVH94097.1|3.9e-2770.59Cupredoxin, partial [Cynara cardunculus var. scolymus][more]
gi|218196921|gb|EEC79348.1|5.8e-2354.12hypothetical protein OsI_20213 [Oryza sativa Indica Group][more]
gi|629117080|gb|KCW81755.1|8.3e-2252.94hypothetical protein EUGRSUZ_C03118 [Eucalyptus grandis][more]
gi|902239850|gb|KNA25758.1|7.0e-2151.76hypothetical protein SOVF_003940 [Spinacia oleracea][more]
gi|125526969|gb|EAY75083.1|4.6e-2054.65hypothetical protein OsI_02977 [Oryza sativa Indica Group][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0005507copper ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011706Cu-oxidase_2
IPR008972Cupredoxin
IPR002355Cu_oxidase_Cu_BS
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046274 lignin catabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0048046 apoplast
cellular_component GO:0031410 cytoplasmic vesicle
molecular_function GO:0005507 copper ion binding
molecular_function GO:0052716 hydroquinone:oxygen oxidoreductase activity
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG20g07810.1Cp4.1LG20g07810.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002355Multicopper oxidase, copper-binding sitePROSITEPS00080MULTICOPPER_OXIDASE2coord: 48..59
scor
IPR008972CupredoxinGENE3DG3DSA:2.60.40.420coord: 1..40
score: 4.2E-5coord: 42..85
score: 1.9
IPR008972CupredoxinunknownSSF49503Cupredoxinscoord: 42..85
score: 2.69
IPR011706Multicopper oxidase, type 2PFAMPF07731Cu-oxidase_2coord: 42..68
score: 7.
NoneNo IPR availablePANTHERPTHR11709MULTI-COPPER OXIDASEcoord: 43..85
score: 6.5
NoneNo IPR availablePANTHERPTHR11709:SF68LACCASE-13-RELATEDcoord: 43..85
score: 6.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG20g07810MELO3C020517.2Melon (DHL92) v3.6.1cpemedB555
Cp4.1LG20g07810CsaV3_1G036510Cucumber (Chinese Long) v3cpecucB0641
Cp4.1LG20g07810Bhi08G000388Wax gourdcpewgoB0644
Cp4.1LG20g07810CsGy1G023690Cucumber (Gy14) v2cgybcpeB088
Cp4.1LG20g07810Carg26952Silver-seed gourdcarcpeB0459
Cp4.1LG20g07810Carg07037Silver-seed gourdcarcpeB0737
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG20g07810Bottle gourd (USVL1VR-Ls)cpelsiB412
Cp4.1LG20g07810Bottle gourd (USVL1VR-Ls)cpelsiB420
Cp4.1LG20g07810Bottle gourd (USVL1VR-Ls)cpelsiB422
Cp4.1LG20g07810Watermelon (Charleston Gray)cpewcgB462
Cp4.1LG20g07810Watermelon (Charleston Gray)cpewcgB465
Cp4.1LG20g07810Watermelon (Charleston Gray)cpewcgB467
Cp4.1LG20g07810Watermelon (97103) v1cpewmB507
Cp4.1LG20g07810Watermelon (97103) v1cpewmB505
Cp4.1LG20g07810Watermelon (97103) v1cpewmB526
Cp4.1LG20g07810Melon (DHL92) v3.5.1cpemeB475
Cp4.1LG20g07810Melon (DHL92) v3.5.1cpemeB479
Cp4.1LG20g07810Cucumber (Gy14) v2cgybcpeB071
Cp4.1LG20g07810Melon (DHL92) v3.6.1cpemedB561
Cp4.1LG20g07810Silver-seed gourdcarcpeB0942
Cp4.1LG20g07810Cucumber (Chinese Long) v3cpecucB0625
Cp4.1LG20g07810Wax gourdcpewgoB0628
Cp4.1LG20g07810Wax gourdcpewgoB0650
Cp4.1LG20g07810Cucurbita pepo (Zucchini)cpecpeB387
Cp4.1LG20g07810Cucurbita pepo (Zucchini)cpecpeB434
Cp4.1LG20g07810Cucurbita pepo (Zucchini)cpecpeB444
Cp4.1LG20g07810Cucumber (Gy14) v1cgycpeB0405
Cp4.1LG20g07810Cucumber (Gy14) v1cgycpeB0407
Cp4.1LG20g07810Cucurbita maxima (Rimu)cmacpeB235
Cp4.1LG20g07810Cucurbita maxima (Rimu)cmacpeB483
Cp4.1LG20g07810Cucurbita maxima (Rimu)cmacpeB636
Cp4.1LG20g07810Cucurbita maxima (Rimu)cmacpeB742
Cp4.1LG20g07810Cucurbita moschata (Rifu)cmocpeB202
Cp4.1LG20g07810Cucurbita moschata (Rifu)cmocpeB441
Cp4.1LG20g07810Cucurbita moschata (Rifu)cmocpeB586
Cp4.1LG20g07810Cucurbita moschata (Rifu)cmocpeB694
Cp4.1LG20g07810Cucurbita moschata (Rifu)cmocpeB695
Cp4.1LG20g07810Wild cucumber (PI 183967)cpecpiB507
Cp4.1LG20g07810Wild cucumber (PI 183967)cpecpiB524
Cp4.1LG20g07810Cucumber (Chinese Long) v2cpecuB507
Cp4.1LG20g07810Cucumber (Chinese Long) v2cpecuB522