Cp4.1LG20g07070 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGTAAATGAAGAGGGAGGTGGTGACAGCTGAAAATTTAAATTGTAAGTTTAAAAAAGAGGTAGTAGCAGTTGGTCGTATGCTGTGGCTAGCGGCCTCCATAGTAAAAAGAATACACATAAAAGGATAGAGGATTGATAGAGGAAGGAGATGGGTCGGCCACCTACTCGAATTCGTTCATCACTTCGATAGATCTTGGGACGATTGGATAGTGACATACGCATGTGCCACAAGGTAGCTCGCTTAGACCACAGGGTCTAGAGGTGGTGGAGAGTTGACACCATGTCATCCCTTAAGGTACATTTTCAGACATTTCCAATCATTTTTGGGTAGACGTCATTATTAACTAAGGGAGAGAAAACCAATGGAATAAAAAAATTTAAAATAAAAGATAAATAATAGGAGAAAATGTCCTTTTTTAAAAAATTTCCTTCCCTCTTTATAGCATATTTTAAACCTAAACCTAAACCCATCTTCTTCTTATTGTTTTTCATTATCTTCATATTGTCCTCGGACAACACTAGACGTTGCTCATCTACTGAATCCATGCACATATCTAGGTAAATTTATTTTAGTTCCACTATTATAATGGCTTATTCATCACCTTCCTCATATATTTTCTTACAAATACCTATTTTTGCACCCAAAAAATTTAATGCTAATATACTATGCAAGCCCATAACTAATCATGAAGATTAGGAGTTGACCTTGCCAAGAAGAGGATTGGGTGGGCCGGGATCGTCGCCGCCAAACTGCAGCTCAAAGTGTGGGAGCTGCACGCCCTGCACTACTGTTCTTGTGTCGGTGCTGCCGGGACCTCCAGGCATCGATGATGATTTCCCGGAAGTCTGGAGATGCAAATGTGGGAACAAGCTCTACATGCCCTGA ATGGTTGAGTTGACCTTGCCAAGAAGAGGATTGGGTGGGCCGGGATCGTCGCCGCCAAACTGCAGCTCAAAGTGTGGGAGCTGCACGCCCTGCACTACTGTTCTTGTGTCGGTGCTGCCGGGACCTCCAGGCATCGATGATGATTTCCCGGAAGTCTGGAGATGCAAATGTGGGAACAAGCTCTACATGCCCTGA ATGGTTGAGTTGACCTTGCCAAGAAGAGGATTGGGTGGGCCGGGATCGTCGCCGCCAAACTGCAGCTCAAAGTGTGGGAGCTGCACGCCCTGCACTACTGTTCTTGTGTCGGTGCTGCCGGGACCTCCAGGCATCGATGATGATTTCCCGGAAGTCTGGAGATGCAAATGTGGGAACAAGCTCTACATGCCCTGA MVELTLPRRGLGGPGSSPPNCSSKCGSCTPCTTVLVSVLPGPPGIDDDFPEVWRCKCGNKLYMP
BLAST of Cp4.1LG20g07070 vs. Swiss-Prot
Match: EPFL6_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana GN=EPFL6 PE=1 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 3.6e-17 Identity = 39/57 (68.42%), Postives = 41/57 (71.93%), Query Frame = 1
BLAST of Cp4.1LG20g07070 vs. Swiss-Prot
Match: EPFL4_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana GN=EPFL4 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 9.7e-15 Identity = 33/53 (62.26%), Postives = 37/53 (69.81%), Query Frame = 1
BLAST of Cp4.1LG20g07070 vs. Swiss-Prot
Match: EPFL5_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana GN=EPFL5 PE=1 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 1.1e-13 Identity = 32/57 (56.14%), Postives = 38/57 (66.67%), Query Frame = 1
BLAST of Cp4.1LG20g07070 vs. Swiss-Prot
Match: PGLR2_JUNAS (Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.8e-08 Identity = 24/49 (48.98%), Postives = 30/49 (61.22%), Query Frame = 1
BLAST of Cp4.1LG20g07070 vs. Swiss-Prot
Match: PGLR2_CHAOB (Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.3e-08 Identity = 24/49 (48.98%), Postives = 29/49 (59.18%), Query Frame = 1
BLAST of Cp4.1LG20g07070 vs. TrEMBL
Match: A0A0A0LXR9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G533610 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 1.8e-20 Identity = 44/61 (72.13%), Postives = 48/61 (78.69%), Query Frame = 1
BLAST of Cp4.1LG20g07070 vs. TrEMBL
Match: A0A151U159_CAJCA (Polygalacturonase OS=Cajanus cajan GN=KK1_005584 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 1.7e-18 Identity = 42/64 (65.62%), Postives = 46/64 (71.88%), Query Frame = 1
BLAST of Cp4.1LG20g07070 vs. TrEMBL
Match: A0A061GXY6_THECC (Allergen-related OS=Theobroma cacao GN=TCM_042272 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 5.0e-18 Identity = 42/61 (68.85%), Postives = 46/61 (75.41%), Query Frame = 1
BLAST of Cp4.1LG20g07070 vs. TrEMBL
Match: A0A0D2MH03_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G152400 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 8.5e-18 Identity = 41/60 (68.33%), Postives = 45/60 (75.00%), Query Frame = 1
BLAST of Cp4.1LG20g07070 vs. TrEMBL
Match: A0A0B0MS25_GOSAR (Epidermal patterning factor-like protein 6 OS=Gossypium arboreum GN=F383_21220 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 8.5e-18 Identity = 41/60 (68.33%), Postives = 45/60 (75.00%), Query Frame = 1
BLAST of Cp4.1LG20g07070 vs. TAIR10
Match: AT2G30370.1 (AT2G30370.1 allergen-related) HSP 1 Score: 88.2 bits (217), Expect = 2.0e-18 Identity = 39/57 (68.42%), Postives = 41/57 (71.93%), Query Frame = 1
BLAST of Cp4.1LG20g07070 vs. TAIR10
Match: AT4G14723.1 (AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)) HSP 1 Score: 80.1 bits (196), Expect = 5.5e-16 Identity = 33/53 (62.26%), Postives = 37/53 (69.81%), Query Frame = 1
BLAST of Cp4.1LG20g07070 vs. TAIR10
Match: AT3G22820.1 (AT3G22820.1 allergen-related) HSP 1 Score: 76.6 bits (187), Expect = 6.0e-15 Identity = 32/57 (56.14%), Postives = 38/57 (66.67%), Query Frame = 1
BLAST of Cp4.1LG20g07070 vs. TAIR10
Match: AT2G20875.1 (AT2G20875.1 epidermal patterning factor 1) HSP 1 Score: 48.1 bits (113), Expect = 2.3e-06 Identity = 20/48 (41.67%), Postives = 27/48 (56.25%), Query Frame = 1
BLAST of Cp4.1LG20g07070 vs. NCBI nr
Match: gi|778661835|ref|XP_011658830.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 6 [Cucumis sativus]) HSP 1 Score: 105.9 bits (263), Expect = 2.6e-20 Identity = 44/61 (72.13%), Postives = 48/61 (78.69%), Query Frame = 1
BLAST of Cp4.1LG20g07070 vs. NCBI nr
Match: gi|659114962|ref|XP_008457315.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 6 [Cucumis melo]) HSP 1 Score: 105.9 bits (263), Expect = 2.6e-20 Identity = 44/61 (72.13%), Postives = 48/61 (78.69%), Query Frame = 1
BLAST of Cp4.1LG20g07070 vs. NCBI nr
Match: gi|694431848|ref|XP_009343315.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Pyrus x bretschneideri]) HSP 1 Score: 101.7 bits (252), Expect = 5.0e-19 Identity = 43/64 (67.19%), Postives = 49/64 (76.56%), Query Frame = 1
BLAST of Cp4.1LG20g07070 vs. NCBI nr
Match: gi|694398360|ref|XP_009374360.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 6 [Pyrus x bretschneideri]) HSP 1 Score: 100.9 bits (250), Expect = 8.5e-19 Identity = 43/64 (67.19%), Postives = 49/64 (76.56%), Query Frame = 1
BLAST of Cp4.1LG20g07070 vs. NCBI nr
Match: gi|694310757|ref|XP_009354667.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 6 [Pyrus x bretschneideri]) HSP 1 Score: 100.9 bits (250), Expect = 8.5e-19 Identity = 43/64 (67.19%), Postives = 49/64 (76.56%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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