Cp4.1LG20g06210 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG20g06210
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Sulfiredoxin
Location	Cp4.1LG20 : 3873401 .. 3876659 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATGCTACAAAGATGGGAAGAACAAAGAACACCTCAAGAAAGATGTCCCTGCAGCCATTGGCTTCCTCAATCAACCAGAGCGAGAAAGACTTCGAAAACCTGCAAAATCAAGGTGTGTTGAACAAACAATTGATGGGTTGGGTTCAATTCAGGCCTCAAGGATTATTTGTTCATAGGAGCTCTTACTTAAATGGGTTGGGCCAAAATTCAGCCCTGAAGACAAAAAAATGGGATTTATTGGCGGCCCATTTTCTCTCATTCCATGGGCTGGATCTGCTAATGCCCATCCATACACATCTTCTTCTTACCATATTGTGCAGAGGACGAGAGCGGAAGTAGGATCGATGATGGCTAATCTTTTCGTTCTCAATTTCCCAAGTTATAGTTCCAGCTTCAGGATCGTCTCTGCTTCAGCTTCCTCAACAAATGGTTCCTCTCGCTATCCTTTATCTCATTGTTCATGCTTTTTCCCCTTATTCACTCGAATCAGTTGATGAATTGGGTATCTTAACGATGAAATGGTAGGCGCTCATCCATTATCAGCAGGGAGCGGCGGCGGCAGCGGCAGCGGGCCAGTGATCCTGGAGCTTCCTCTGGAGAAGATACGGAGGCCTCTAATGAGGACCAGATCAAACAACCCCGATAAAATCAAAGAATTAATGGAAAGTATACAAGAAATTGGGCTTCAAGTACCTGTGAGCTTTTTCGCCTCCTCCATTCATCATATCTTGATTGAACTCGTTTCTAGATCGTTTCCCACAGGATCAACAGACTGAAATGATTATAATATTGGGCGTCCATGATTTTCTTTTGCACTTTTTTCTTCTTTGATTCTAATATGCTTTAAGATTTGGATTAGTGCTAATGAATTTGATTGAAAGATGGCAACATATGCTCTAGAGGCTTACTTGTTCTCTCTCTCCTGTGGATGCAGATTGATGTTCTTGAAGTTGATGGAGTTTATTACGGTATGCTAATTTTATCCTAATCAATGTTAATACTCAGAACTTGGTACTTTTAATAAATGTTAATACTAATAACATTGTTAGTTTGAAGTTGATTTTGATCGAATTTTGTAAAATGAATTTCATTCGAGAGAGTAAATATGTTCATTCAAGACGGGAGATTGATTTTAAGATTTATTTAAAGTACGAGTTCTAAGATGGGTTATTCTAAAGTATAAGAACAGGAATTTCTTCAACCATGATAGCGTGGCCTAATGGTCAATAAAGTTCATACTAATCCTAAAGAGTTTAGAAGCAATAGAATCAAGTACAATGGTCGGCATCTAGGATGTAATATCTTGCGAGTTTTTTTGACAATTAAATGTGGTAGGGTCAGACGGCTGTCTTGTGAGAGAATAGTCGGATGTTTCAAGCATGCTTGATTTGGTACAGTAGCGTTTCAAGCATGCTTGATTTGGTATAGTAGCAAGTGGAAATGTCTCATCTAGTTTATTATTTTGGATGACTAGATTTTCTTCTCATGTCTTTGTAGGTTTCTCTGGTTGTCATCGTTACGAAGCTCATCAACGGCTCGGGCTTCCTACAATCCGTTGCAAAATTCGTCGTGGAACCAAGGAAACCCTAAGGTTTGTTGTACTACATCTTAGGACACGTTTGGAAGCTATTTTAAAATGGTTAAAATCACTTTTGTCATGTTCTAACAACGAAACATACCTTTATTCATTCAAAATCAATTCAATATTTGATTCTTCACGTTTAAACCTGATTTTCCTACCAGCAAAATTGACTTCGAATGATTAAAAATATGTTTCTAAGCGATTTTAAACCGTTTCAAAACCGCTCCCAAACGTGCATATAAGTGCTATTTCTAGTGATTGATTTTCCCCTTTATAATGCATTTGTTTGTCCATCATCTTGCAGGCACCACCTACGTTGAGGTATCAGAAGGTTGCCTGCTGGTAGTAAATTTGCAAGTTCCATCAAACTATTTATTGTTTTTAATGCCATCAAAAGCTATTAATGGATACTCAGAACAAAGCATGTGTATATGAATATTACAAATATTTTCAATCTCAAAGGTTTACATGTAAAGAAACCATTACTTGTAGATCCATTTCGATGTCTAAAACTTACTAACTCGAGCATAATGCGGAGCGTTGCTGTCTCGGGACCGTTACTGATATTGAGATTTGTTTCATGGCCAAATCTGAGCTACTACTTCCAAAAGTGATAAAAAAAATCATAATCACAATACTAAGATCTAAGGAACTACTACTTCATTTGATTGATTTTTGTTCTATCATAGAACTTGAAGCAATTTCACGTACATTTTTAACAAAATTCATACAAATTACAATGGCAGAAGAACATGGAACAAAGAGAAGTTTTACTTGTATGCTAGCGGTCCAGATCTTGAGACAGCAAACCTTGGAAGGGGGCTAGGACCTGAGCCGCCTGAAGTCGAGCCTTCAACATGTTTCACTTTGCGGCTGGAACTGTAATCCAAAGGGCCTGAACGACGAGCGTTCCGGTGTTTAGTTTCGATGCTCCTTGAGCTTCCGCTATCATGATCATGGATAGAGCCCTGACTATGCATCATTGATCCCTTAAAGTAACTCAAATCACTGCTTCCATACTGAGGAGTAGCATCGCCACGAGGCTGGCGTGGTGCAGGGGATGCATGAGTTAGCGACACAACGGGCGAGTAGCGTGGGGATGCACTGAGGAGCGCTAATGCCCCTGGAGAATTGGCATAGTATTGGCTATATATTGAACGTAGAATGGCATAAGGAACATAAGGCTCCAAAGAGCTTCTTGGAAGGTAAGGTGAGACCTCACATAGTTGATCAAGAAAGATAAGCTGTGCTACAAGATGAGATCTGTTGGAAAAAGAAGTTAGTACCTATCCTACATAGTATGCCGATTAACGATACCAAAAACGTTCGACATTATATATGAGCAGACGAATATGGAGAAAACTTAAGGCTTCAACTCGAGCAGGTTTTTAACATTCAAACAAACAGTTTCGAGTTGCACTCAGAATATAAACTAAGAAATTTATATGCAAAATTAGATTACCTGTTAGCTTCACTCCATGAATCTAAGATAATTCCAGCAGCAAGTTTTACAAAGAGCTGCATTGTTGACTTTATGCTTGCTTCAACCGATGTAAGACCATCGCCCTCGGAATTCAACGTTCCACCAGCATGACCATTTGGAAAAGGCTGCCTCTGCTCGTGTTCACGATCCAATCTCATGTACTCACTTCCAGCAATCACTGCAGTGATGCACC

mRNA sequence

AAATGCTACAAAGATGGGAAGAACAAAGAACACCTCAAGAAAGATGTCCCTGCAGCCATTGGCTTCCTCAATCAACCAGAGCGAGAAAGACTTCGAAAACCTGCAAAATCAAGCCCTGAAGACAAAAAAATGGGATTTATTGGCGGCCCATTTTCTCTCATTCCATGGGCTGGATCTGCTAATGCCCATCCATACACATCTTCTTCTTACCATATTGTGCAGAGGACGAGAGCGGAAGTAGGATCGATGATGGCTAATCTTTTCGTTCTCAATTTCCCAAGTTATAGTTCCAGCTTCAGGATCGTCTCTGCTTCAGCTTCCTCAACAAATGGCGCTCATCCATTATCAGCAGGGAGCGGCGGCGGCAGCGGCAGCGGGCCAGTGATCCTGGAGCTTCCTCTGGAGAAGATACGGAGGCCTCTAATGAGGACCAGATCAAACAACCCCGATAAAATCAAAGAATTAATGGAAAGTATACAAGAAATTGGGCTTCAAGTACCTGTTTCTCTGGTTGTCATCGTTACGAAGCTCATCAACGGCTCGGGCTTCCTACAATCCGTTGCAAAATTCGTCGTGGAACCAAGGAAACCCTAAGGCACCACCTACGTTGAGGTATCAGAAGGTTGCCTGCTGGTAGTAAATTTGCAAGTTCCATCAAACTATTTATTGTTTTTAATGCCATCAAAAGCTATTAATGGATACTCAGAACAAAGCATGTGTATATGAATATTACAAATATTTTCAATCTCAAAGGTTTACATGTAAAGAAACCATTACTTGTAGATCCATTTCGATGTCTAAAACTTACTAACTCGAGCATAATGCGGAGCGTTGCTGTCTCGGGACCGTTACTGATATTGAGATTTGTTTCATGGCCAAATCTGAGCTACTACTTCCAAAAGTGATAAAAAAAATCATAATCACAATACTAAGATCTAAGGAACTACTACTTCATTTGATTGATTTTTGTTCTATCATAGAACTTGAAGCAATTTCACGTACATTTTTAACAAAATTCATACAAATTACAATGGCAGAAGAACATGGAACAAAGAGAAGTTTTACTTGTATGCTAGCGGTCCAGATCTTGAGACAGCAAACCTTGGAAGGGGGCTAGGACCTGAGCCGCCTGAAGTCGAGCCTTCAACATGTTTCACTTTGCGGCTGGAACTGTAATCCAAAGGGCCTGAACGACGAGCGTTCCGGTGTTTAGTTTCGATGCTCCTTGAGCTTCCGCTATCATGATCATGGATAGAGCCCTGACTATGCATCATTGATCCCTTAAAGTAACTCAAATCACTGCTTCCATACTGAGGAGTAGCATCGCCACGAGGCTGGCGTGGTGCAGGGGATGCATGAGTTAGCGACACAACGGGCGAGTAGCGTGGGGATGCACTGAGGAGCGCTAATGCCCCTGGAGAATTGGCATAGTATTGGCTATATATTGAACGTAGAATGGCATAAGGAACATAAGGCTCCAAAGAGCTTCTTGGAAGGTAAGGTGAGACCTCACATAGTTGATCAAGAAAGATAAGCTGTGCTACAAGATGAGATCTGTTGGAAAAAGAAGTTAGTACCTATCCTACATAGTATGCCGATTAACGATACCAAAAACGTTCGACATTATATATGAGCAGACGAATATGGAGAAAACTTAAGGCTTCAACTCGAGCAGGTTTTTAACATTCAAACAAACAGTTTCGAGTTGCACTCAGAATATAAACTAAGAAATTTATATGCAAAATTAGATTACCTGTTAGCTTCACTCCATGAATCTAAGATAATTCCAGCAGCAAGTTTTACAAAGAGCTGCATTGTTGACTTTATGCTTGCTTCAACCGATGTAAGACCATCGCCCTCGGAATTCAACGTTCCACCAGCATGACCATTTGGAAAAGGCTGCCTCTGCTCGTGTTCACGATCCAATCTCATGTACTCACTTCCAGCAATCACTGCAGTGATGCACC

Coding sequence (CDS)

AAATGCTACAAAGATGGGAAGAACAAAGAACACCTCAAGAAAGATGTCCCTGCAGCCATTGGCTTCCTCAATCAACCAGAGCGAGAAAGACTTCGAAAACCTGCAAAATCAAGCCCTGAAGACAAAAAAATGGGATTTATTGGCGGCCCATTTTCTCTCATTCCATGGGCTGGATCTGCTAATGCCCATCCATACACATCTTCTTCTTACCATATTGTGCAGAGGACGAGAGCGGAAGTAGGATCGATGATGGCTAATCTTTTCGTTCTCAATTTCCCAAGTTATAGTTCCAGCTTCAGGATCGTCTCTGCTTCAGCTTCCTCAACAAATGGCGCTCATCCATTATCAGCAGGGAGCGGCGGCGGCAGCGGCAGCGGGCCAGTGATCCTGGAGCTTCCTCTGGAGAAGATACGGAGGCCTCTAATGAGGACCAGATCAAACAACCCCGATAAAATCAAAGAATTAATGGAAAGTATACAAGAAATTGGGCTTCAAGTACCTGTTTCTCTGGTTGTCATCGTTACGAAGCTCATCAACGGCTCGGGCTTCCTACAATCCGTTGCAAAATTCGTCGTGGAACCAAGGAAACCCTAA

Protein sequence

KCYKDGKNKEHLKKDVPAAIGFLNQPERERLRKPAKSSPEDKKMGFIGGPFSLIPWAGSANAHPYTSSSYHIVQRTRAEVGSMMANLFVLNFPSYSSSFRIVSASASSTNGAHPLSAGSGGGSGSGPVILELPLEKIRRPLMRTRSNNPDKIKELMESIQEIGLQVPVSLVVIVTKLINGSGFLQSVAKFVVEPRKP

Homology

[Close]

BLAST of Cp4.1LG20g06210 vs. Swiss-Prot
Match: SRX_ARATH (Sulfiredoxin, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SRX PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.4e-17
Identity = 52/90 (57.78%), Postives = 69/90 (76.67%), Query Frame = 1


Query: 84  MANLFVLNFPSYSSSFRIVSASASSTNGAHPLSAGSGGGSGSGPVILELPLEKIRRPLMR 143
           MANL ++  P    S R  S SASS+NG+ P+  GS GG G  P+I+ELPLEKIRRPLMR
Sbjct: 1   MANL-MMRLPI---SLRSFSVSASSSNGSPPVIGGSSGGVG--PMIVELPLEKIRRPLMR 60

Query: 144 TRSNNPDKIKELMESIQEIGLQVPVSLVVI 174
           TRSN+ +K+KELM+SI++IGLQVP+ ++ +
Sbjct: 61  TRSNDQNKVKELMDSIRQIGLQVPIDVIEV 84

[Close]

BLAST of Cp4.1LG20g06210 vs. TrEMBL
Match: A0A0A0LYK6_CUCSA (Sulfiredoxin OS=Cucumis sativus GN=Csa_1G701390 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 9.6e-28
Identity = 71/91 (78.02%), Postives = 83/91 (91.21%), Query Frame = 1


Query: 83  MMANLFVLNFPSYSSSFRIVSASASSTNGAHPLSAGSGGGSGSGPVILELPLEKIRRPLM 142
           MMANLF+L FPS+SSS R VSASASS NGAHPLSAGSG  +GSGP+ILELPLEKIRRPLM
Sbjct: 1   MMANLFILKFPSFSSSLRTVSASASS-NGAHPLSAGSG--NGSGPMILELPLEKIRRPLM 60

Query: 143 RTRSNNPDKIKELMESIQEIGLQVPVSLVVI 174
           RTR+N+PDK+KELM+SIQEIGLQVP+ ++ +
Sbjct: 61  RTRANDPDKVKELMDSIQEIGLQVPIDVLEV 88

[Close]

BLAST of Cp4.1LG20g06210 vs. TrEMBL
Match: A0A061DXV5_THECC (Sulfiredoxin isoform 3 OS=Theobroma cacao GN=TCM_006053 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.0e-22
Identity = 73/113 (64.60%), Postives = 87/113 (76.99%), Query Frame = 1


Query: 84  MANLFVLNFPSYSSSFRIVSASASSTNGAHPLSAGSGGGSGSGPVILELPLEKIRRPLMR 143
           MAN FVL  P+  S+ R  S  ASS NGA P+  GS  G   GPVILELPL+KIRRPLMR
Sbjct: 1   MAN-FVLQLPT--SNLRSFSVYASS-NGA-PMGTGSQSG---GPVILELPLDKIRRPLMR 60

Query: 144 TRSNNPDKIKELMESIQEIGLQVPVSLVVIVTKLINGSGFLQSVAKFVVEPRK 197
           TR+N+P+K++ELM+SI+EIGLQVPVSLVVIV +L +  G  QSVAKF VEP+K
Sbjct: 61  TRANDPNKVQELMDSIREIGLQVPVSLVVIVMRLTSALGSQQSVAKFDVEPKK 105

[Close]

BLAST of Cp4.1LG20g06210 vs. TrEMBL
Match: V4UI00_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017175mg PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.8e-19
Identity = 63/113 (55.75%), Postives = 81/113 (71.68%), Query Frame = 1


Query: 84  MANLFVLNFPSYSSSFRIVSASASSTNGAHPLSAGSGGGSGSGPVILELPLEKIRRPLMR 143
           MAN FV+  P  ++SF +     S+++  +P   GS    GSGPVILELPL+KIRRPLMR
Sbjct: 1   MAN-FVVQLPK-TNSFNLKRFCVSASSNGNP--PGSSESRGSGPVILELPLDKIRRPLMR 60

Query: 144 TRSNNPDKIKELMESIQEIGLQVPVSLVVIVTKLINGSGFLQSVAKFVVEPRK 197
           TR+N+ +K+KELM+SIQ+IGLQVPV L V   +L +  GF QSV KFVVE +K
Sbjct: 61  TRANDQNKVKELMDSIQQIGLQVPVFLGVTGMRLTSALGFQQSVVKFVVEQKK 109

[Close]

BLAST of Cp4.1LG20g06210 vs. TrEMBL
Match: A0A078FHH0_BRANA (BnaC08g09260D protein OS=Brassica napus GN=BnaC08g09260D PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.8e-19
Identity = 57/99 (57.58%), Postives = 75/99 (75.76%), Query Frame = 1


Query: 75  RTRAEVGSMMANLFVLNFPSYSSSFRIVSASASSTNGAHPLSAGSGGGSGSGPVILELPL 134
           + R +  + MANL +L FP   SS R  S SASS+NG+ P+  GS G  G GP+ILELPL
Sbjct: 79  KEREKTATTMANLMMLRFP---SSLRSFSVSASSSNGSPPVIGGSSG--GVGPMILELPL 138

Query: 135 EKIRRPLMRTRSNNPDKIKELMESIQEIGLQVPVSLVVI 174
           EKIRRPLMRTRSN+ +K+KELM+SI++IGLQVP+ ++ +
Sbjct: 139 EKIRRPLMRTRSNDQNKVKELMDSIRQIGLQVPIDVIEV 172

[Close]

BLAST of Cp4.1LG20g06210 vs. TrEMBL
Match: A0A0D3AU12_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea GN=ATSRX PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.4e-18
Identity = 56/99 (56.57%), Postives = 74/99 (74.75%), Query Frame = 1


Query: 75  RTRAEVGSMMANLFVLNFPSYSSSFRIVSASASSTNGAHPLSAGSGGGSGSGPVILELPL 134
           + R +  +  ANL +L FP   SS R  S SASS+NG+ P+  GS G  G GP+ILELPL
Sbjct: 79  KEREKTATTRANLMMLRFP---SSLRSFSVSASSSNGSPPVIGGSSG--GVGPMILELPL 138

Query: 135 EKIRRPLMRTRSNNPDKIKELMESIQEIGLQVPVSLVVI 174
           EKIRRPLMRTRSN+ +K+KELM+SI++IGLQVP+ ++ +
Sbjct: 139 EKIRRPLMRTRSNDQNKVKELMDSIRQIGLQVPIDVIEV 172

[Close]

BLAST of Cp4.1LG20g06210 vs. TAIR10
Match: AT1G31170.4 (AT1G31170.4 sulfiredoxin)

HSP 1 Score: 89.0 bits (219), Expect = 3.6e-18
Identity = 52/90 (57.78%), Postives = 69/90 (76.67%), Query Frame = 1


Query: 84  MANLFVLNFPSYSSSFRIVSASASSTNGAHPLSAGSGGGSGSGPVILELPLEKIRRPLMR 143
           MANL ++  P    S R  S SASS+NG+ P+  GS GG G  P+I+ELPLEKIRRPLMR
Sbjct: 1   MANL-MMRLPI---SLRSFSVSASSSNGSPPVIGGSSGGVG--PMIVELPLEKIRRPLMR 60

Query: 144 TRSNNPDKIKELMESIQEIGLQVPVSLVVI 174
           TRSN+ +K+KELM+SI++IGLQVP+ ++ +
Sbjct: 61  TRSNDQNKVKELMDSIRQIGLQVPIDVIEV 84

[Close]

BLAST of Cp4.1LG20g06210 vs. NCBI nr
Match: gi|659118241|ref|XP_008459018.1| (PREDICTED: sulfiredoxin, chloroplastic/mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 134.0 bits (336), Expect = 2.8e-28
Identity = 76/96 (79.17%), Postives = 85/96 (88.54%), Query Frame = 1


Query: 77  RAEVGSMMANLFVLNFPSYSSSFRIVSASASSTNGAHPLSAGSGGGSGSGPVILELPLEK 136
           R EV SMMANLF+L FPS+SSS R VSASASS NGA PLSAGSG  +GSGP+ILELPLEK
Sbjct: 32  REEVRSMMANLFILKFPSFSSSLRTVSASASS-NGALPLSAGSG--NGSGPMILELPLEK 91

Query: 137 IRRPLMRTRSNNPDKIKELMESIQEIGLQVPVSLVV 173
           IRRPLMRTR+N+PDK+KELM+SIQEIGLQVP S V+
Sbjct: 92  IRRPLMRTRANDPDKVKELMDSIQEIGLQVPFSTVL 124

[Close]

BLAST of Cp4.1LG20g06210 vs. NCBI nr
Match: gi|659118243|ref|XP_008459019.1| (PREDICTED: sulfiredoxin, chloroplastic/mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 133.3 bits (334), Expect = 4.7e-28
Identity = 74/97 (76.29%), Postives = 86/97 (88.66%), Query Frame = 1


Query: 77  RAEVGSMMANLFVLNFPSYSSSFRIVSASASSTNGAHPLSAGSGGGSGSGPVILELPLEK 136
           R EV SMMANLF+L FPS+SSS R VSASASS NGA PLSAGSG  +GSGP+ILELPLEK
Sbjct: 32  REEVRSMMANLFILKFPSFSSSLRTVSASASS-NGALPLSAGSG--NGSGPMILELPLEK 91

Query: 137 IRRPLMRTRSNNPDKIKELMESIQEIGLQVPVSLVVI 174
           IRRPLMRTR+N+PDK+KELM+SIQEIGLQVP+ ++ +
Sbjct: 92  IRRPLMRTRANDPDKVKELMDSIQEIGLQVPIDVLEV 125

[Close]

BLAST of Cp4.1LG20g06210 vs. NCBI nr
Match: gi|449455397|ref|XP_004145439.1| (PREDICTED: sulfiredoxin, chloroplastic/mitochondrial [Cucumis sativus])

HSP 1 Score: 131.7 bits (330), Expect = 1.4e-27
Identity = 71/91 (78.02%), Postives = 83/91 (91.21%), Query Frame = 1


Query: 83  MMANLFVLNFPSYSSSFRIVSASASSTNGAHPLSAGSGGGSGSGPVILELPLEKIRRPLM 142
           MMANLF+L FPS+SSS R VSASASS NGAHPLSAGSG  +GSGP+ILELPLEKIRRPLM
Sbjct: 1   MMANLFILKFPSFSSSLRTVSASASS-NGAHPLSAGSG--NGSGPMILELPLEKIRRPLM 60

Query: 143 RTRSNNPDKIKELMESIQEIGLQVPVSLVVI 174
           RTR+N+PDK+KELM+SIQEIGLQVP+ ++ +
Sbjct: 61  RTRANDPDKVKELMDSIQEIGLQVPIDVLEV 88

[Close]

BLAST of Cp4.1LG20g06210 vs. NCBI nr
Match: gi|590681426|ref|XP_007041085.1| (Sulfiredoxin isoform 3 [Theobroma cacao])

HSP 1 Score: 112.5 bits (280), Expect = 8.7e-22
Identity = 73/113 (64.60%), Postives = 87/113 (76.99%), Query Frame = 1


Query: 84  MANLFVLNFPSYSSSFRIVSASASSTNGAHPLSAGSGGGSGSGPVILELPLEKIRRPLMR 143
           MAN FVL  P+  S+ R  S  ASS NGA P+  GS  G   GPVILELPL+KIRRPLMR
Sbjct: 1   MAN-FVLQLPT--SNLRSFSVYASS-NGA-PMGTGSQSG---GPVILELPLDKIRRPLMR 60

Query: 144 TRSNNPDKIKELMESIQEIGLQVPVSLVVIVTKLINGSGFLQSVAKFVVEPRK 197
           TR+N+P+K++ELM+SI+EIGLQVPVSLVVIV +L +  G  QSVAKF VEP+K
Sbjct: 61  TRANDPNKVQELMDSIREIGLQVPVSLVVIVMRLTSALGSQQSVAKFDVEPKK 105

[Close]

BLAST of Cp4.1LG20g06210 vs. NCBI nr
Match: gi|567912765|ref|XP_006448696.1| (hypothetical protein CICLE_v10017175mg [Citrus clementina])

HSP 1 Score: 102.8 bits (255), Expect = 6.9e-19
Identity = 63/113 (55.75%), Postives = 81/113 (71.68%), Query Frame = 1


Query: 84  MANLFVLNFPSYSSSFRIVSASASSTNGAHPLSAGSGGGSGSGPVILELPLEKIRRPLMR 143
           MAN FV+  P  ++SF +     S+++  +P   GS    GSGPVILELPL+KIRRPLMR
Sbjct: 1   MAN-FVVQLPK-TNSFNLKRFCVSASSNGNP--PGSSESRGSGPVILELPLDKIRRPLMR 60

Query: 144 TRSNNPDKIKELMESIQEIGLQVPVSLVVIVTKLINGSGFLQSVAKFVVEPRK 197
           TR+N+ +K+KELM+SIQ+IGLQVPV L V   +L +  GF QSV KFVVE +K
Sbjct: 61  TRANDQNKVKELMDSIQQIGLQVPVFLGVTGMRLTSALGFQQSVVKFVVEQKK 109

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g06210 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SRX_ARATH	6.4e-17	57.78	Sulfiredoxin, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SRX PE=1 SV...	[more]

BLAST of Cp4.1LG20g06210 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYK6_CUCSA	9.6e-28	78.02	Sulfiredoxin OS=Cucumis sativus GN=Csa_1G701390 PE=3 SV=1	[more]
A0A061DXV5_THECC	6.0e-22	64.60	Sulfiredoxin isoform 3 OS=Theobroma cacao GN=TCM_006053 PE=4 SV=1	[more]
V4UI00_9ROSI	4.8e-19	55.75	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017175mg PE=4 SV=1	[more]
A0A078FHH0_BRANA	4.8e-19	57.58	BnaC08g09260D protein OS=Brassica napus GN=BnaC08g09260D PE=4 SV=1	[more]
A0A0D3AU12_BRAOL	2.4e-18	56.57	Uncharacterized protein OS=Brassica oleracea var. oleracea GN=ATSRX PE=4 SV=1	[more]

BLAST of Cp4.1LG20g06210 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31170.4	3.6e-18	57.78	sulfiredoxin	[more]

BLAST of Cp4.1LG20g06210 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118241\|ref\|XP_008459018.1\|	2.8e-28	79.17	PREDICTED: sulfiredoxin, chloroplastic/mitochondrial isoform X1 [Cucumis melo]	[more]
gi\|659118243\|ref\|XP_008459019.1\|	4.7e-28	76.29	PREDICTED: sulfiredoxin, chloroplastic/mitochondrial isoform X2 [Cucumis melo]	[more]
gi\|449455397\|ref\|XP_004145439.1\|	1.4e-27	78.02	PREDICTED: sulfiredoxin, chloroplastic/mitochondrial [Cucumis sativus]	[more]
gi\|590681426\|ref\|XP_007041085.1\|	8.7e-22	64.60	Sulfiredoxin isoform 3 [Theobroma cacao]	[more]
gi\|567912765\|ref\|XP_006448696.1\|	6.9e-19	55.75	hypothetical protein CICLE_v10017175mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003115	ParB/Sulfiredoxin_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0032542	sulfiredoxin activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g06210.1	Cp4.1LG20g06210.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003115	ParB/Sulfiredoxin	PFAM	PF02195	ParBc	coord: 131..169 score: 1.
IPR003115	ParB/Sulfiredoxin	unknown	SSF110849	ParB/Sulfiredoxin	coord: 126..173 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG20g06210	Cucsa.332760	Cucumber (Gy14) v1	cgycpeB0869
Cp4.1LG20g06210	CmaCh13G004220	Cucurbita maxima (Rimu)	cmacpeB234
Cp4.1LG20g06210	CmaCh18G005630	Cucurbita maxima (Rimu)	cmacpeB438
Cp4.1LG20g06210	CmoCh13G004520	Cucurbita moschata (Rifu)	cmocpeB201
Cp4.1LG20g06210	CmoCh18G005400	Cucurbita moschata (Rifu)	cmocpeB403
Cp4.1LG20g06210	Csa1G701390	Cucumber (Chinese Long) v2	cpecuB518
Cp4.1LG20g06210	MELO3C021735	Melon (DHL92) v3.5.1	cpemeB477
Cp4.1LG20g06210	ClCG01G009570	Watermelon (Charleston Gray)	cpewcgB451
Cp4.1LG20g06210	CSPI01G34360	Wild cucumber (PI 183967)	cpecpiB520
Cp4.1LG20g06210	Lsi02G010590	Bottle gourd (USVL1VR-Ls)	cpelsiB417
Cp4.1LG20g06210	MELO3C021735.2	Melon (DHL92) v3.6.1	cpemedB562
Cp4.1LG20g06210	CsaV3_1G046220	Cucumber (Chinese Long) v3	cpecucB0637
Cp4.1LG20g06210	Bhi08G000717	Wax gourd	cpewgoB0651
Cp4.1LG20g06210	CsGy1G032830	Cucumber (Gy14) v2	cgybcpeB083
Cp4.1LG20g06210	Carg26136	Silver-seed gourd	carcpeB0170

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG20g06210	Cp4.1LG09g06750	Cucurbita pepo (Zucchini)	cpecpeB048

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG20g06210	Watermelon (97103) v1	cpewmB521
Cp4.1LG20g06210	Watermelon (97103) v1	cpewmB519
Cp4.1LG20g06210	Watermelon (97103) v1	cpewmB514