Cp4.1LG20g06180 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG20g06180
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	HISTIDINE TRIAD NUCLEOTIDE-BINDING 2
Location	Cp4.1LG20 : 3876561 .. 3879777 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCGAAGTCTTTCTCGCTCTGGTTGATTGAGGAAGCCAATGGCTGCAGGGACATCTTTCTTGAGGTGTTCTTTGTTCTTCCCATCTTTGTAGCATTTTCTGTCACAATGAAATGTGAAATTGTTTGTTTTGGTGTGAAACTCGCAGGCAATGTATAGCTACGACTACCAGAACATTGGTGACTGCGAAATTGAAACATTCCGGCAATCACTTCACGGCCTTTCTACTTCCACTTCGTACTAGCTCTCGAAGGTAGACAAGCTTTTTCTATGTATTTACGAGGATTATGTTGAAATCAAGAAGTTTGTTTTTATGGCTTTGGCTTATTATGACTGTAATATATGGGAGCGAAGAAATGTTATCCATCTTGTTGAAATATGTATGGAGCCCCTAGTTTCTACCTCTGAAATGTAAACAGTATCTGAGTGTTGACAATAGAAGATTTTCTAATTTCGTTCGAGAGGGATGGTGTGAGATCCCACATCGGTTGGAGAAAAATCTTGAGGGAAAGCTCGAAAAGGAAAGCCTAGAGAGGACAATATCTGCTAGCGGTGGGCTTGGGCTAATACAAATGGTATGGCGATGTGCCAACGAGGACGCTGATCCCCAAAGGAGAGTGGACACGAGGCGGTGTGCCAGCAAGGACGGTGGGGGGTTGGATTGGGTGAGTCCCACACTGATTAGAGAAGGGAATGAGTGCCAATGAGGACGCTAGCCCTGAAGAGGTGTGGATTGGGGGAATCCCACACGTGAACGAGTGCCAACGAGGACGCTGGGCCCTGAAGAGGTGTGGATTGTGAGATCCTACATCGGTTGGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAAACGCCTTTTAAAAACCTTGAGGGGAAGTCCAAAAGGGAAAGCCCGAAGAGGACAATATCTGCTAGCGATGGGGCCGTTACGTTTAAACTATTTTTTTACCACTTAATAGATTTTTAATTCCATTTGAATTTCCAATAGTTGATCTCTTCCCTATTCCAATAAGCTAGCTATTCAAGTACTGACATAGTTTTTATTGCTGCATTGTATTTTCTCCAGATTGACCATTCGTGCTAGCAGCACAAACAATGAAGAACTTGCTGCTAAAGCAGCTGCATCTGATGCAGACAGTGGAGCTCCAACCATGTATGTCTTTAATAAATTATTGAGGCTGATTAGATGTTGCTAAAGCCTTAAAATTCCATTATCCAAGAATTAAGCTTGAAGAATTATTATTCACTTGTAAGAAGATATGCATGCTAGTGTGAAAAAATTATCAACTCTTGAACAAAGCAATGGGATATATTGCCTTCCCGGATCAAAATATTAGGTGTGAAACTAAGCTACGTCTCATGTTTAGGATCTAAATCTAGGCATTATTAAGGTTAACATGTGTCAAGAAAACCAAGTCTCGAGAAAGAGACGATGTTCGGGTGACGCGAAAATCTTGTTCTATTGATCCATCTAATCTACCCATATATTTGAGCCATTTGAATTGTGTTTCAAATTATTTACGATGTTGGAAATTTTTTGTAACGGTCCAAGCCCACGCTAGCAGATATTGTCCTCTTTAGGTTTTTCCTTCCAGGCTTCCCCTTAAGGTTTTAAAATGCGTCTACTGGAGAGAGGTTTCCATACCCACTCCCTTATAAGGAATGTTCCGTTCCCCTCTCCAATCAATGTGGGATCTCATACTTTTTTATTCTTTTAAGATACGGGTCAATGTTAGATGTTAAAAAGAAAATAGTTAGACTGATATTGAGCTTATACGATATTCTTTGACATTTTTGCTTCAGATTTGACAAAATAATAGCCAAGGAAATTCCTTCAAACATCGTTTATGAGGATGAGAAGGTCCTTGCATTTCGAGACATAAATCCACAAGCTCCTGTTCATATATTAATCATTCCAAAGCTCAGAGATGGATTGACAGAGCTGGGAAAGGTGTTTCTTTTTTCCTCCTGTTCTTCTTATCTCTCTATACTATCTTGCACATACTGAGTTCCTCTGAAATAGCATATTGAGTGTTCCTTTTTCTCTTTGATTCCTTTCTTTCTTTCATTCTTTTGTTCTTTTTGTTTTTCCTACAAAGTATAGAAACGTGAGCAAACAGTTTAGATGTAGTGTGTTATCGATTCTGGGTGATTTTTTATGCATTAATGGGCTATTTGGTGGTAGGAAGTCTACATATCTGATATCTATAGATGTTTAACATCTGGATAACTAGGAATTGAATGCCCAATAAATTAGATAACTATGTTTCTTGAGTAGAATAATCACATATAACTCTTTTTATATCTCTTTTTCCAAAAGTAATACCCTTCTTATACCATTATATTAAGTTAAGTCAACCACATTTCTTTTTCCTTTTTTCTTTTTTCATTCTTTCCTTTTCTAGCCGGAGGCTAGAATGGATTACAGCTCAAGCCCACGGCTGGCAGATGTTGTCCTCTTTGGGTTTTTTCATTCAGGCTTCCCCTCAAGGTTTTTAAAACGCGTCTGTTAGGGAGAGATTTCCACACACTTATAAAGAATACTTTGCTCCTCTCCAATCGATGTGGGATCGCACAATCCACCCCCTTCGAGGCCCAGCGTCCTCGCTGGCACTCGTTCCCTTCTCCAATCGATGTGGGACCCTTCAATCCACTCCCCTTTGAGACCCAACGTTCTTGTTGACACACTGCCTCGTGTCCTATTGTGAGATCCCACATCGGTTGAAGAGGGGAACAAAACATTATTTATAAGAGTGTGAAAACTTCTCTCTAGCAGACACGTTTTAAAAATCTCGAGGGGTGCCCAAAGAGGACAACATCTGCAAAATTTTGAGCTGTTCTTCTGAAGACGCAGTTTGCATTCATGCTTATGTTTTGAGCATTTAATAGCCCAAATGTGTGAAATTGAGGTGTGTATGAACTTGTTAGGCTGAAGCAAGACATGGGGAGATACTGGGTCAGCTGCTATATGCAGCCAAAGTAGTGGCTGAGAAAGAGGGTATTGTTGAAGGATTTCGTGTAGTGATCAACAGTGGTGCAAGTGCTTGTAAGCCTCAGAAACAATCTATGTTGTTCTTCTGTCTCTGCTTTTGGTGCCATCTTACACTGATATCTCTCTTCCTCACAACAGGTCAATCTGTGTATCATCTTCACCTGCACGTCCTGGGAGGGAGACAGCTGAAGTGGCCTCCAGGTTGA

mRNA sequence

TTTTCGAAGTCTTTCTCGCTCTGGTTGATTGAGGAAGCCAATGGCTGCAGGGACATCTTTCTTGAGGCAATGTATAGCTACGACTACCAGAACATTGGTGACTGCGAAATTGAAACATTCCGGCAATCACTTCACGGCCTTTCTACTTCCACTTCATTGACCATTCGTGCTAGCAGCACAAACAATGAAGAACTTGCTGCTAAAGCAGCTGCATCTGATGCAGACAGTGGAGCTCCAACCATATTTGACAAAATAATAGCCAAGGAAATTCCTTCAAACATCGTTTATGAGGATGAGAAGGTCCTTGCATTTCGAGACATAAATCCACAAGCTCCTGTTCATATATTAATCATTCCAAAGCTCAGAGATGGATTGACAGAGCTGGGAAAGGCTGAAGCAAGACATGGGGAGATACTGGGTCAGCTGCTATATGCAGCCAAAGTAGTGGCTGAGAAAGAGGGTATTGTTGAAGGATTTCGTGTAGTGATCAACAGTGGTGCAAGTGCTTGTCAATCTGTGTATCATCTTCACCTGCACGTCCTGGGAGGGAGACAGCTGAAGTGGCCTCCAGGTTGA

Coding sequence (CDS)

TTTTCGAAGTCTTTCTCGCTCTGGTTGATTGAGGAAGCCAATGGCTGCAGGGACATCTTTCTTGAGGCAATGTATAGCTACGACTACCAGAACATTGGTGACTGCGAAATTGAAACATTCCGGCAATCACTTCACGGCCTTTCTACTTCCACTTCATTGACCATTCGTGCTAGCAGCACAAACAATGAAGAACTTGCTGCTAAAGCAGCTGCATCTGATGCAGACAGTGGAGCTCCAACCATATTTGACAAAATAATAGCCAAGGAAATTCCTTCAAACATCGTTTATGAGGATGAGAAGGTCCTTGCATTTCGAGACATAAATCCACAAGCTCCTGTTCATATATTAATCATTCCAAAGCTCAGAGATGGATTGACAGAGCTGGGAAAGGCTGAAGCAAGACATGGGGAGATACTGGGTCAGCTGCTATATGCAGCCAAAGTAGTGGCTGAGAAAGAGGGTATTGTTGAAGGATTTCGTGTAGTGATCAACAGTGGTGCAAGTGCTTGTCAATCTGTGTATCATCTTCACCTGCACGTCCTGGGAGGGAGACAGCTGAAGTGGCCTCCAGGTTGA

Protein sequence

FSKSFSLWLIEEANGCRDIFLEAMYSYDYQNIGDCEIETFRQSLHGLSTSTSLTIRASSTNNEELAAKAAASDADSGAPTIFDKIIAKEIPSNIVYEDEKVLAFRDINPQAPVHILIIPKLRDGLTELGKAEARHGEILGQLLYAAKVVAEKEGIVEGFRVVINSGASACQSVYHLHLHVLGGRQLKWPPG

Homology

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BLAST of Cp4.1LG20g06180 vs. Swiss-Prot
Match: ZB14_MAIZE (14 kDa zinc-binding protein OS=Zea mays GN=ZBP14 PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 9.8e-47
Identity = 90/124 (72.58%), Postives = 103/124 (83.06%), Query Frame = 1


Query: 68  KAAASDADSGAPTIFDKIIAKEIPSNIVYEDEKVLAFRDINPQAPVHILIIPKLRDGLTE 127
           K AA      +PTIFDKII KEIPS +VYEDEKVLAFRDINPQAP HILIIPK++DGLT 
Sbjct: 5   KEAALRRLDDSPTIFDKIIKKEIPSTVVYEDEKVLAFRDINPQAPTHILIIPKVKDGLTG 64

Query: 128 LGKAEARHGEILGQLLYAAKVVAEKEGIVEGFRVVINSGASACQSVYHLHLHVLGGRQLK 187
           L KAE RH EILG LLY AKVVA++EG+ +G+RVVIN G S CQSVYH+H+H+LGGRQ+ 
Sbjct: 65  LAKAEERHIEILGYLLYVAKVVAKQEGLEDGYRVVINDGPSGCQSVYHIHVHLLGGRQMN 124

Query: 188 WPPG 192
           WPPG
Sbjct: 125 WPPG 128

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BLAST of Cp4.1LG20g06180 vs. Swiss-Prot
Match: HINT1_ARATH (Adenylylsulfatase HINT1 OS=Arabidopsis thaliana GN=HINT1 PE=1 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.9e-46
Identity = 92/147 (62.59%), Postives = 115/147 (78.23%), Query Frame = 1


Query: 45  HGLSTSTSLTIRASSTNNEELAAKAAASDADSGAPTIFDKIIAKEIPSNIVYEDEKVLAF 104
           H +S  +S    AS+    E  A  AA+ +DS  PTIFDKII+KEIPS +V+ED+KVLAF
Sbjct: 3   HRVSILSSHFSPASAVMASEKEAALAATPSDS--PTIFDKIISKEIPSTVVFEDDKVLAF 62

Query: 105 RDINPQAPVHILIIPKLRDGLTELGKAEARHGEILGQLLYAAKVVAEKEGIVEGFRVVIN 164
           RDI PQ PVHIL+IPK+RDGLT L KAE RH +ILG+LLY AK+VA++EG+ EGFR+VIN
Sbjct: 63  RDITPQGPVHILLIPKVRDGLTGLSKAEERHIDILGRLLYTAKLVAKQEGLAEGFRIVIN 122

Query: 165 SGASACQSVYHLHLHVLGGRQLKWPPG 192
            G   CQSVYH+H+H++GGRQ+ WPPG
Sbjct: 123 DGPQGCQSVYHIHVHLIGGRQMNWPPG 147

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BLAST of Cp4.1LG20g06180 vs. Swiss-Prot
Match: ZB14_BRAJU (14 kDa zinc-binding protein (Fragment) OS=Brassica juncea PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.3e-43
Identity = 80/112 (71.43%), Postives = 97/112 (86.61%), Query Frame = 1


Query: 80  TIFDKIIAKEIPSNIVYEDEKVLAFRDINPQAPVHILIIPKLRDGLTELGKAEARHGEIL 139
           TIF KII+KEIPS +VYED+KVLAFRDI PQ PVHIL+IPK+RDGLT L KAE RH +IL
Sbjct: 2   TIFGKIISKEIPSTVVYEDDKVLAFRDITPQGPVHILLIPKVRDGLTGLFKAEERHIDIL 61

Query: 140 GQLLYAAKVVAEKEGIVEGFRVVINSGASACQSVYHLHLHVLGGRQLKWPPG 192
           G+LLY AK+VA++EG+ EGFR+VIN G   CQSVYH+H+H++GGRQ+ WPPG
Sbjct: 62  GRLLYTAKLVAKQEGLDEGFRIVINDGPQGCQSVYHIHVHLIGGRQMNWPPG 113

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BLAST of Cp4.1LG20g06180 vs. Swiss-Prot
Match: Y1390_SYNE7 (Uncharacterized HIT-like protein Synpcc7942_1390 OS=Synechococcus elongatus (strain PCC 7942) GN=Synpcc7942_1390 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.2e-32
Identity = 65/112 (58.04%), Postives = 83/112 (74.11%), Query Frame = 1


Query: 80  TIFDKIIAKEIPSNIVYEDEKVLAFRDINPQAPVHILIIPKLRDGLTELGKAEARHGEIL 139
           TIF KII +EIP++IVYED+  LAFRD+ PQAPVHIL+IPK    +  L +A A H  +L
Sbjct: 5   TIFGKIIRREIPADIVYEDDLCLAFRDVAPQAPVHILVIPK--QPIANLLEATAEHQALL 64

Query: 140 GQLLYAAKVVAEKEGIVEGFRVVINSGASACQSVYHLHLHVLGGRQLKWPPG 192
           G LL   K +A +EG+ EG+R VIN+G +  Q+VYHLH+H+LGGR L WPPG
Sbjct: 65  GHLLLTVKAIAAQEGLTEGYRTVINTGPAGGQTVYHLHIHLLGGRSLAWPPG 114

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BLAST of Cp4.1LG20g06180 vs. Swiss-Prot
Match: HINT2_BOVIN (Histidine triad nucleotide-binding protein 2, mitochondrial OS=Bos taurus GN=HINT2 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 6.8e-32
Identity = 68/135 (50.37%), Postives = 95/135 (70.37%), Query Frame = 1


Query: 57  ASSTNNEELAAKAAASDADSGAPTIFDKIIAKEIPSNIVYEDEKVLAFRDINPQAPVHIL 116
           A  T+ +E+A KA  +     APTIF +I+ + +P++I+YED++ LAFRD+ PQAPVH L
Sbjct: 32  AGVTDGDEVA-KAQQAAPGGAAPTIFSRILDRSLPADILYEDQQCLAFRDVAPQAPVHFL 91

Query: 117 IIPKLRDGLTELGKAEARHGEILGQLLYAAKVVAEKEGIVEGFRVVINSGASACQSVYHL 176
           +IPK    +  + +AE    ++LG LL  AK  A+ EG+ +G+R+VIN G    QSVYHL
Sbjct: 92  VIPK--KPIPRISQAEEEDQQLLGHLLLVAKETAKAEGLGDGYRLVINDGKLGAQSVYHL 151

Query: 177 HLHVLGGRQLKWPPG 192
           H+HVLGGRQL+WPPG
Sbjct: 152 HIHVLGGRQLQWPPG 163

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BLAST of Cp4.1LG20g06180 vs. TrEMBL
Match: A0A0A0M163_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701380 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 7.1e-68
Identity = 132/142 (92.96%), Postives = 138/142 (97.18%), Query Frame = 1


Query: 50  STSLTIRASSTNNEELAAKAAASDADSGAPTIFDKIIAKEIPSNIVYEDEKVLAFRDINP 109
           S  LTIRA  TNNEE+AAKAAASDADSGAPTIFDKII+KEIPSNIVYED+KVLAFRDINP
Sbjct: 42  SRRLTIRAGITNNEEVAAKAAASDADSGAPTIFDKIISKEIPSNIVYEDDKVLAFRDINP 101

Query: 110 QAPVHILIIPKLRDGLTELGKAEARHGEILGQLLYAAKVVAEKEGIVEGFRVVINSGASA 169
           QAPVH+LIIPKLRDGLTELGKAEARHGEILGQLLYAAK+VAEKEGIVEGFRVVINSGASA
Sbjct: 102 QAPVHVLIIPKLRDGLTELGKAEARHGEILGQLLYAAKIVAEKEGIVEGFRVVINSGASA 161

Query: 170 CQSVYHLHLHVLGGRQLKWPPG 192
           CQSVYHLHLHVLGGRQ+KWPPG
Sbjct: 162 CQSVYHLHLHVLGGRQMKWPPG 183

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BLAST of Cp4.1LG20g06180 vs. TrEMBL
Match: Q2MGQ9_MEDTR (Histidine triad (HIT) protein OS=Medicago truncatula GN=MTR_4g084190 PE=2 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.7e-61
Identity = 119/139 (85.61%), Postives = 130/139 (93.53%), Query Frame = 1


Query: 53  LTIRASSTNNEELAAKAAASDADSGAPTIFDKIIAKEIPSNIVYEDEKVLAFRDINPQAP 112
           L   AS+TNNE+ AAKAAA +ADSGAPTIFDKII KEIPS+IVYEDEKVLAFRDI+PQAP
Sbjct: 44  LPFSASATNNEQAAAKAAAVNADSGAPTIFDKIINKEIPSSIVYEDEKVLAFRDISPQAP 103

Query: 113 VHILIIPKLRDGLTELGKAEARHGEILGQLLYAAKVVAEKEGIVEGFRVVINSGASACQS 172
           VH+L+IPK RDGLTELGKA+ARHGEILGQLLYAAK+VAEKEGI +GFRVVINSGASACQS
Sbjct: 104 VHVLVIPKFRDGLTELGKADARHGEILGQLLYAAKIVAEKEGIADGFRVVINSGASACQS 163

Query: 173 VYHLHLHVLGGRQLKWPPG 192
           VYHLHLHVLGGRQ+ WPPG
Sbjct: 164 VYHLHLHVLGGRQMNWPPG 182

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BLAST of Cp4.1LG20g06180 vs. TrEMBL
Match: F6HF59_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g01610 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.2e-60
Identity = 114/136 (83.82%), Postives = 128/136 (94.12%), Query Frame = 1


Query: 56  RASSTNNEELAAKAAASDADSGAPTIFDKIIAKEIPSNIVYEDEKVLAFRDINPQAPVHI 115
           R S+TNNEE  AKAAA++ADSGAPTIFDKIIAKEIPS IVYEDEKVLAFRD+NPQAPVH+
Sbjct: 43  RISATNNEEATAKAAAANADSGAPTIFDKIIAKEIPSTIVYEDEKVLAFRDVNPQAPVHV 102

Query: 116 LIIPKLRDGLTELGKAEARHGEILGQLLYAAKVVAEKEGIVEGFRVVINSGASACQSVYH 175
           L+IPKLRDGLT+LGKAE RH +ILGQLLYAA++VAEKEG+++GFRVVINSG  ACQSVYH
Sbjct: 103 LVIPKLRDGLTQLGKAEVRHEQILGQLLYAARLVAEKEGVLDGFRVVINSGPDACQSVYH 162

Query: 176 LHLHVLGGRQLKWPPG 192
           LHLHVLGGRQ+KWPPG
Sbjct: 163 LHLHVLGGRQMKWPPG 178

[Close]

BLAST of Cp4.1LG20g06180 vs. TrEMBL
Match: W9S3I5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018496 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.7e-59
Identity = 116/141 (82.27%), Postives = 130/141 (92.20%), Query Frame = 1


Query: 51  TSLTIRASSTNNEELAAKAAASDADSGAPTIFDKIIAKEIPSNIVYEDEKVLAFRDINPQ 110
           T  + R ++TNNEE AAKAAA DAD+GAPTIFDKIIAKEIP++IVYEDEKVLAFRDI PQ
Sbjct: 36  TIFSCRTNATNNEEAAAKAAAVDADTGAPTIFDKIIAKEIPASIVYEDEKVLAFRDITPQ 95

Query: 111 APVHILIIPKLRDGLTELGKAEARHGEILGQLLYAAKVVAEKEGIVEGFRVVINSGASAC 170
           APVH+L+IPKLRDGLT+LGKAE  H EILGQLL+AAK+VAEKEGI++GFRVVINSG SAC
Sbjct: 96  APVHVLVIPKLRDGLTQLGKAEPGHVEILGQLLHAAKLVAEKEGILDGFRVVINSGPSAC 155

Query: 171 QSVYHLHLHVLGGRQLKWPPG 192
           QSVYHLHLHVLGGRQ+KWPPG
Sbjct: 156 QSVYHLHLHVLGGRQMKWPPG 176

[Close]

BLAST of Cp4.1LG20g06180 vs. TrEMBL
Match: A0A072UM23_MEDTR (Scavenger mRNA decapping enzyme carboxy-term-binding protein OS=Medicago truncatula GN=MTR_4g084190 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.7e-59
Identity = 119/147 (80.95%), Postives = 130/147 (88.44%), Query Frame = 1


Query: 53  LTIRASSTNNEELAAKAAASDADSGAPTIFDKIIAKEIPSNIVYEDEKVLAFRDINPQAP 112
           L   AS+TNNE+ AAKAAA +ADSGAPTIFDKII KEIPS+IVYEDEKVLAFRDI+PQAP
Sbjct: 44  LPFSASATNNEQAAAKAAAVNADSGAPTIFDKIINKEIPSSIVYEDEKVLAFRDISPQAP 103

Query: 113 VHILIIPKLRDGLTELGK--------AEARHGEILGQLLYAAKVVAEKEGIVEGFRVVIN 172
           VH+L+IPK RDGLTELGK        A+ARHGEILGQLLYAAK+VAEKEGI +GFRVVIN
Sbjct: 104 VHVLVIPKFRDGLTELGKVANHLVLYADARHGEILGQLLYAAKIVAEKEGIADGFRVVIN 163

Query: 173 SGASACQSVYHLHLHVLGGRQLKWPPG 192
           SGASACQSVYHLHLHVLGGRQ+ WPPG
Sbjct: 164 SGASACQSVYHLHLHVLGGRQMNWPPG 190

[Close]

BLAST of Cp4.1LG20g06180 vs. TAIR10
Match: AT1G31160.1 (AT1G31160.1 HISTIDINE TRIAD NUCLEOTIDE-BINDING 2)

HSP 1 Score: 229.2 bits (583), Expect = 2.2e-60
Identity = 112/142 (78.87%), Postives = 126/142 (88.73%), Query Frame = 1


Query: 50  STSLTIRASSTNNEELAAKAAASDADSGAPTIFDKIIAKEIPSNIVYEDEKVLAFRDINP 109
           S  L     + +NEE AAKAAAS AD+GAPTIFDKIIAKEIPS+IVYEDE VLAFRDINP
Sbjct: 46  SKRLICSTRAAHNEEAAAKAAASVADTGAPTIFDKIIAKEIPSDIVYEDENVLAFRDINP 105

Query: 110 QAPVHILIIPKLRDGLTELGKAEARHGEILGQLLYAAKVVAEKEGIVEGFRVVINSGASA 169
           QAPVH+L+IPKLRDGLT LGKAE RH E+LGQLL+A+K+VAEKEGI++GFRVVIN+G  A
Sbjct: 106 QAPVHVLVIPKLRDGLTSLGKAEPRHVEVLGQLLHASKIVAEKEGILDGFRVVINNGVEA 165

Query: 170 CQSVYHLHLHVLGGRQLKWPPG 192
           CQSVYHLHLHVLGGRQ+KWPPG
Sbjct: 166 CQSVYHLHLHVLGGRQMKWPPG 187

[Close]

BLAST of Cp4.1LG20g06180 vs. TAIR10
Match: AT3G56490.1 (AT3G56490.1 HIS triad family protein 3)

HSP 1 Score: 186.4 bits (472), Expect = 1.6e-47
Identity = 92/147 (62.59%), Postives = 115/147 (78.23%), Query Frame = 1


Query: 45  HGLSTSTSLTIRASSTNNEELAAKAAASDADSGAPTIFDKIIAKEIPSNIVYEDEKVLAF 104
           H +S  +S    AS+    E  A  AA+ +DS  PTIFDKII+KEIPS +V+ED+KVLAF
Sbjct: 3   HRVSILSSHFSPASAVMASEKEAALAATPSDS--PTIFDKIISKEIPSTVVFEDDKVLAF 62

Query: 105 RDINPQAPVHILIIPKLRDGLTELGKAEARHGEILGQLLYAAKVVAEKEGIVEGFRVVIN 164
           RDI PQ PVHIL+IPK+RDGLT L KAE RH +ILG+LLY AK+VA++EG+ EGFR+VIN
Sbjct: 63  RDITPQGPVHILLIPKVRDGLTGLSKAEERHIDILGRLLYTAKLVAKQEGLAEGFRIVIN 122

Query: 165 SGASACQSVYHLHLHVLGGRQLKWPPG 192
            G   CQSVYH+H+H++GGRQ+ WPPG
Sbjct: 123 DGPQGCQSVYHIHVHLIGGRQMNWPPG 147

[Close]

BLAST of Cp4.1LG20g06180 vs. TAIR10
Match: AT5G48545.1 (AT5G48545.1 histidine triad nucleotide-binding 3)

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-07
Identity = 31/101 (30.69%), Postives = 53/101 (52.48%), Query Frame = 1


Query: 81  IFDKIIAKEIPSNIVYEDEKVLAFRDINPQAPVHILIIPKLRDGLTELGKAEARHGEILG 140
           +F KII  E P   +YED+  L   D NP +  H LIIPKL     E     +    +  
Sbjct: 51  VFCKIIRGESPCLKLYEDDMCLCILDTNPLSHGHSLIIPKLHYPTLE-ETPPSVVAAMCS 110

Query: 141 QLLYAAKVVAEKEGIVEGFRVVINSGASACQSVYHLHLHVL 182
           ++   +  + +  G  + F +++N+GA+A Q ++H H+H++
Sbjct: 111 KVPLISNAIVKATG-SDSFNLLVNNGAAAGQVIFHTHIHII 149

[Close]

BLAST of Cp4.1LG20g06180 vs. NCBI nr
Match: gi|449455393|ref|XP_004145437.1| (PREDICTED: 14 kDa zinc-binding protein isoform X2 [Cucumis sativus])

HSP 1 Score: 265.0 bits (676), Expect = 1.0e-67
Identity = 132/142 (92.96%), Postives = 138/142 (97.18%), Query Frame = 1


Query: 50  STSLTIRASSTNNEELAAKAAASDADSGAPTIFDKIIAKEIPSNIVYEDEKVLAFRDINP 109
           S  LTIRA  TNNEE+AAKAAASDADSGAPTIFDKII+KEIPSNIVYED+KVLAFRDINP
Sbjct: 42  SRRLTIRAGITNNEEVAAKAAASDADSGAPTIFDKIISKEIPSNIVYEDDKVLAFRDINP 101

Query: 110 QAPVHILIIPKLRDGLTELGKAEARHGEILGQLLYAAKVVAEKEGIVEGFRVVINSGASA 169
           QAPVH+LIIPKLRDGLTELGKAEARHGEILGQLLYAAK+VAEKEGIVEGFRVVINSGASA
Sbjct: 102 QAPVHVLIIPKLRDGLTELGKAEARHGEILGQLLYAAKIVAEKEGIVEGFRVVINSGASA 161

Query: 170 CQSVYHLHLHVLGGRQLKWPPG 192
           CQSVYHLHLHVLGGRQ+KWPPG
Sbjct: 162 CQSVYHLHLHVLGGRQMKWPPG 183

[Close]

BLAST of Cp4.1LG20g06180 vs. NCBI nr
Match: gi|778664512|ref|XP_011660307.1| (PREDICTED: 14 kDa zinc-binding protein isoform X1 [Cucumis sativus])

HSP 1 Score: 265.0 bits (676), Expect = 1.0e-67
Identity = 132/142 (92.96%), Postives = 138/142 (97.18%), Query Frame = 1


Query: 50  STSLTIRASSTNNEELAAKAAASDADSGAPTIFDKIIAKEIPSNIVYEDEKVLAFRDINP 109
           S  LTIRA  TNNEE+AAKAAASDADSGAPTIFDKII+KEIPSNIVYED+KVLAFRDINP
Sbjct: 43  SRRLTIRAGITNNEEVAAKAAASDADSGAPTIFDKIISKEIPSNIVYEDDKVLAFRDINP 102

Query: 110 QAPVHILIIPKLRDGLTELGKAEARHGEILGQLLYAAKVVAEKEGIVEGFRVVINSGASA 169
           QAPVH+LIIPKLRDGLTELGKAEARHGEILGQLLYAAK+VAEKEGIVEGFRVVINSGASA
Sbjct: 103 QAPVHVLIIPKLRDGLTELGKAEARHGEILGQLLYAAKIVAEKEGIVEGFRVVINSGASA 162

Query: 170 CQSVYHLHLHVLGGRQLKWPPG 192
           CQSVYHLHLHVLGGRQ+KWPPG
Sbjct: 163 CQSVYHLHLHVLGGRQMKWPPG 184

[Close]

BLAST of Cp4.1LG20g06180 vs. NCBI nr
Match: gi|659118239|ref|XP_008459017.1| (PREDICTED: 14 kDa zinc-binding protein isoform X2 [Cucumis melo])

HSP 1 Score: 263.5 bits (672), Expect = 2.9e-67
Identity = 131/142 (92.25%), Postives = 138/142 (97.18%), Query Frame = 1


Query: 50  STSLTIRASSTNNEELAAKAAASDADSGAPTIFDKIIAKEIPSNIVYEDEKVLAFRDINP 109
           S  LTIRA  TNNEE+AAKAAASDADSGAPTIFDKII+KEIPSNIVYED+KVLAFRDINP
Sbjct: 42  SRRLTIRAGITNNEEVAAKAAASDADSGAPTIFDKIISKEIPSNIVYEDDKVLAFRDINP 101

Query: 110 QAPVHILIIPKLRDGLTELGKAEARHGEILGQLLYAAKVVAEKEGIVEGFRVVINSGASA 169
           QAPVH+LIIPKLRDGLTELGKAEARHGEILG+LLYAAK+VAEKEGIVEGFRVVINSGASA
Sbjct: 102 QAPVHVLIIPKLRDGLTELGKAEARHGEILGRLLYAAKIVAEKEGIVEGFRVVINSGASA 161

Query: 170 CQSVYHLHLHVLGGRQLKWPPG 192
           CQSVYHLHLHVLGGRQ+KWPPG
Sbjct: 162 CQSVYHLHLHVLGGRQMKWPPG 183

[Close]

BLAST of Cp4.1LG20g06180 vs. NCBI nr
Match: gi|659118237|ref|XP_008459016.1| (PREDICTED: 14 kDa zinc-binding protein isoform X1 [Cucumis melo])

HSP 1 Score: 263.5 bits (672), Expect = 2.9e-67
Identity = 131/142 (92.25%), Postives = 138/142 (97.18%), Query Frame = 1


Query: 50  STSLTIRASSTNNEELAAKAAASDADSGAPTIFDKIIAKEIPSNIVYEDEKVLAFRDINP 109
           S  LTIRA  TNNEE+AAKAAASDADSGAPTIFDKII+KEIPSNIVYED+KVLAFRDINP
Sbjct: 43  SRRLTIRAGITNNEEVAAKAAASDADSGAPTIFDKIISKEIPSNIVYEDDKVLAFRDINP 102

Query: 110 QAPVHILIIPKLRDGLTELGKAEARHGEILGQLLYAAKVVAEKEGIVEGFRVVINSGASA 169
           QAPVH+LIIPKLRDGLTELGKAEARHGEILG+LLYAAK+VAEKEGIVEGFRVVINSGASA
Sbjct: 103 QAPVHVLIIPKLRDGLTELGKAEARHGEILGRLLYAAKIVAEKEGIVEGFRVVINSGASA 162

Query: 170 CQSVYHLHLHVLGGRQLKWPPG 192
           CQSVYHLHLHVLGGRQ+KWPPG
Sbjct: 163 CQSVYHLHLHVLGGRQMKWPPG 184

[Close]

BLAST of Cp4.1LG20g06180 vs. NCBI nr
Match: gi|357475225|ref|XP_003607898.1| (scavenger mRNA decapping enzyme carboxy-term-binding protein [Medicago truncatula])

HSP 1 Score: 243.8 bits (621), Expect = 2.4e-61
Identity = 119/139 (85.61%), Postives = 130/139 (93.53%), Query Frame = 1


Query: 53  LTIRASSTNNEELAAKAAASDADSGAPTIFDKIIAKEIPSNIVYEDEKVLAFRDINPQAP 112
           L   AS+TNNE+ AAKAAA +ADSGAPTIFDKII KEIPS+IVYEDEKVLAFRDI+PQAP
Sbjct: 44  LPFSASATNNEQAAAKAAAVNADSGAPTIFDKIINKEIPSSIVYEDEKVLAFRDISPQAP 103

Query: 113 VHILIIPKLRDGLTELGKAEARHGEILGQLLYAAKVVAEKEGIVEGFRVVINSGASACQS 172
           VH+L+IPK RDGLTELGKA+ARHGEILGQLLYAAK+VAEKEGI +GFRVVINSGASACQS
Sbjct: 104 VHVLVIPKFRDGLTELGKADARHGEILGQLLYAAKIVAEKEGIADGFRVVINSGASACQS 163

Query: 173 VYHLHLHVLGGRQLKWPPG 192
           VYHLHLHVLGGRQ+ WPPG
Sbjct: 164 VYHLHLHVLGGRQMNWPPG 182

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g06180 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ZB14_MAIZE	9.8e-47	72.58	14 kDa zinc-binding protein OS=Zea mays GN=ZBP14 PE=1 SV=1	[more]
HINT1_ARATH	2.9e-46	62.59	Adenylylsulfatase HINT1 OS=Arabidopsis thaliana GN=HINT1 PE=1 SV=1	[more]
ZB14_BRAJU	1.3e-43	71.43	14 kDa zinc-binding protein (Fragment) OS=Brassica juncea PE=2 SV=1	[more]
Y1390_SYNE7	5.2e-32	58.04	Uncharacterized HIT-like protein Synpcc7942_1390 OS=Synechococcus elongatus (str...	[more]
HINT2_BOVIN	6.8e-32	50.37	Histidine triad nucleotide-binding protein 2, mitochondrial OS=Bos taurus GN=HIN...	[more]

BLAST of Cp4.1LG20g06180 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M163_CUCSA	7.1e-68	92.96	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701380 PE=4 SV=1	[more]
Q2MGQ9_MEDTR	1.7e-61	85.61	Histidine triad (HIT) protein OS=Medicago truncatula GN=MTR_4g084190 PE=2 SV=1	[more]
F6HF59_VITVI	3.2e-60	83.82	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g01610 PE=4 SV=...	[more]
W9S3I5_9ROSA	2.7e-59	82.27	Uncharacterized protein OS=Morus notabilis GN=L484_018496 PE=4 SV=1	[more]
A0A072UM23_MEDTR	2.7e-59	80.95	Scavenger mRNA decapping enzyme carboxy-term-binding protein OS=Medicago truncat...	[more]

BLAST of Cp4.1LG20g06180 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31160.1	2.2e-60	78.87	HISTIDINE TRIAD NUCLEOTIDE-BINDING 2	[more]
AT3G56490.1	1.6e-47	62.59	HIS triad family protein 3	[more]
AT5G48545.1	1.3e-07	30.69	histidine triad nucleotide-binding 3	[more]

BLAST of Cp4.1LG20g06180 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449455393\|ref\|XP_004145437.1\|	1.0e-67	92.96	PREDICTED: 14 kDa zinc-binding protein isoform X2 [Cucumis sativus]	[more]
gi\|778664512\|ref\|XP_011660307.1\|	1.0e-67	92.96	PREDICTED: 14 kDa zinc-binding protein isoform X1 [Cucumis sativus]	[more]
gi\|659118239\|ref\|XP_008459017.1\|	2.9e-67	92.25	PREDICTED: 14 kDa zinc-binding protein isoform X2 [Cucumis melo]	[more]
gi\|659118237\|ref\|XP_008459016.1\|	2.9e-67	92.25	PREDICTED: 14 kDa zinc-binding protein isoform X1 [Cucumis melo]	[more]
gi\|357475225\|ref\|XP_003607898.1\|	2.4e-61	85.61	scavenger mRNA decapping enzyme carboxy-term-binding protein [Medicago truncatul...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Vocabulary: **INTERPRO**
Term	Definition
IPR019808	Histidine_triad_CS
IPR011146	HIT-like
IPR001310	Histidine_triad_HIT

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g06180.1	Cp4.1LG20g06180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001310	Histidine triad (HIT) protein	PRINTS	PR00332	HISTRIAD	coord: 102..120 score: 6.1E-21coord: 171..181 score: 6.1E-21coord: 81..97 score: 6.1
IPR001310	Histidine triad (HIT) protein	PANTHER	PTHR23089	HISTIDINE TRIAD HIT PROTEIN	coord: 29..191 score: 6.9
IPR001310	Histidine triad (HIT) protein	PFAM	PF01230	HIT	coord: 88..185 score: 2.7
IPR011146	HIT-like domain	GENE3D	G3DSA:3.30.428.10		coord: 70..191 score: 2.3
IPR011146	HIT-like domain	PROFILE	PS51084	HIT_2	coord: 81..191 score:
IPR011146	HIT-like domain	unknown	SSF54197	HIT-like	coord: 79..190 score: 1.18
IPR019808	Histidine triad, conserved site	PROSITE	PS00892	HIT_1	coord: 164..182 scor
None	No IPR available	PANTHER	PTHR23089:SF3	HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 1	coord: 29..191 score: 6.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG20g06180	Cucsa.332750	Cucumber (Gy14) v1	cgycpeB0869
Cp4.1LG20g06180	CmaCh13G004210	Cucurbita maxima (Rimu)	cmacpeB234
Cp4.1LG20g06180	CmoCh13G004510	Cucurbita moschata (Rifu)	cmocpeB201
Cp4.1LG20g06180	Cla004604	Watermelon (97103) v1	cpewmB519
Cp4.1LG20g06180	Csa1G701380	Cucumber (Chinese Long) v2	cpecuB518
Cp4.1LG20g06180	MELO3C021734	Melon (DHL92) v3.5.1	cpemeB477
Cp4.1LG20g06180	ClCG01G009580	Watermelon (Charleston Gray)	cpewcgB451
Cp4.1LG20g06180	CSPI01G34350	Wild cucumber (PI 183967)	cpecpiB520
Cp4.1LG20g06180	Lsi02G010600	Bottle gourd (USVL1VR-Ls)	cpelsiB417
Cp4.1LG20g06180	MELO3C021734.2	Melon (DHL92) v3.6.1	cpemedB562
Cp4.1LG20g06180	CsaV3_1G046210	Cucumber (Chinese Long) v3	cpecucB0637
Cp4.1LG20g06180	Bhi08G000716	Wax gourd	cpewgoB0651
Cp4.1LG20g06180	CsGy1G032820	Cucumber (Gy14) v2	cgybcpeB083
Cp4.1LG20g06180	Carg26135	Silver-seed gourd	carcpeB0170

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG20g06180	Watermelon (97103) v1	cpewmB521
Cp4.1LG20g06180	Watermelon (97103) v1	cpewmB514
Cp4.1LG20g06180	Cucurbita pepo (Zucchini)	cpecpeB048
Cp4.1LG20g06180	Cucurbita maxima (Rimu)	cmacpeB438
Cp4.1LG20g06180	Cucurbita moschata (Rifu)	cmocpeB403