Cp4.1LG20g05740 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG20g05740
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGermin-like protein 1
LocationCp4.1LG20 : 3422106 .. 3423170 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTATAATGCCTGTATATTAGCTATTTCATTTCTAGCACTACCCTTCTTTATTGCTTTGGCAGCTGACCAGAGCCCTATTCAAGATTTCTGTGTAGCAGATACTGGAAGTACAGGTATTGTTTGATCTCCCCAGCTTGTTTTGGGTCCTATGCTTAGCAGTTTTAACAATTTATCTTAGTTGCTAATGAGAAGATGCTCATATTATTTTCTAAATCTTCAGCAATCTCTAGCTTAGCTACAATTTTGTTGCCTATTTCTACGGTATAACCAACCAATGTAAGGGAGTAATCATATTCATTTATGCTAATACATTTCATTTGTGCTCTTTCTTTTAATAACTAGTCTTTCTTTCCTTCATGCTTGCATCTTTAACACATTTGTGTAGGATAATCATGATTTGCTTTCTTTCTAAGTTATCTGTCATCTTTTTCAGAAAATATAAAGTTTCTTAGATGCTACCCTTTTCCATGATTCTACTAGGACTTATCACTAAAGCATCTCATGCTGTTAGAAATTGATTGCAGTGTTACTAAATGGACTAACCTGCAAGGACCCAAAGCATGTTGTTGCCGATGACTTTTCCTTTGGCGGGCTTCACCTTGCAGCTAACACATCAAATGCCCTGGGGTGTCATGTGACTCCAGTTACTCCATCAGAAATGCCTGGACTCAACACTCTCGGCATCTCCATCATTAGAATAGACTATGCACCACGAGGCATCAACCCTCTGCACACGCACCCTCGAGCTTCTGAGATATTGATTGTCTTGGAAGGCAGCCTAGAAGTAGGATTCATCACATCGTATCCTGAAAATCGACATATAGGGAAAGTGTTGCAGAAGGGCGATGTGTTTGTGTTCCCTATTGGTCTTGTTCACTACCAGAGAAATCCAGGTCCTACGAATGCGGTTGCTATTGCTGCTCTCAGCAGCCAAAATCCAGGAGTTATTATGGTTGCAAATGCAGTATTTGGTTCTACTCCAAATATTTCCAGTGACATTCTAGAGAAGTCTTTTCAAATCAATAAAAATGTTATTGGCTACCTTCAAACTAAGTTCTAG

mRNA sequence

ATGGCCTATAATGCCTGTATATTAGCTATTTCATTTCTAGCACTACCCTTCTTTATTGCTTTGGCAGCTGACCAGAGCCCTATTCAAGATTTCTGTGTAGCAGATACTGGAAGTACAGTGTTACTAAATGGACTAACCTGCAAGGACCCAAAGCATGTTGTTGCCGATGACTTTTCCTTTGGCGGGCTTCACCTTGCAGCTAACACATCAAATGCCCTGGGGTGTCATGTGACTCCAGTTACTCCATCAGAAATGCCTGGACTCAACACTCTCGGCATCTCCATCATTAGAATAGACTATGCACCACGAGGCATCAACCCTCTGCACACGCACCCTCGAGCTTCTGAGATATTGATTGTCTTGGAAGGCAGCCTAGAAGTAGGATTCATCACATCGTATCCTGAAAATCGACATATAGGGAAAGTGTTGCAGAAGGGCGATGTGTTTGTGTTCCCTATTGGTCTTGTTCACTACCAGAGAAATCCAGGTCCTACGAATGCGGTTGCTATTGCTGCTCTCAGCAGCCAAAATCCAGGAGTTATTATGGTTGCAAATGCAGTATTTGGTTCTACTCCAAATATTTCCAGTGACATTCTAGAGAAGTCTTTTCAAATCAATAAAAATGTTATTGGCTACCTTCAAACTAAGTTCTAG

Coding sequence (CDS)

ATGGCCTATAATGCCTGTATATTAGCTATTTCATTTCTAGCACTACCCTTCTTTATTGCTTTGGCAGCTGACCAGAGCCCTATTCAAGATTTCTGTGTAGCAGATACTGGAAGTACAGTGTTACTAAATGGACTAACCTGCAAGGACCCAAAGCATGTTGTTGCCGATGACTTTTCCTTTGGCGGGCTTCACCTTGCAGCTAACACATCAAATGCCCTGGGGTGTCATGTGACTCCAGTTACTCCATCAGAAATGCCTGGACTCAACACTCTCGGCATCTCCATCATTAGAATAGACTATGCACCACGAGGCATCAACCCTCTGCACACGCACCCTCGAGCTTCTGAGATATTGATTGTCTTGGAAGGCAGCCTAGAAGTAGGATTCATCACATCGTATCCTGAAAATCGACATATAGGGAAAGTGTTGCAGAAGGGCGATGTGTTTGTGTTCCCTATTGGTCTTGTTCACTACCAGAGAAATCCAGGTCCTACGAATGCGGTTGCTATTGCTGCTCTCAGCAGCCAAAATCCAGGAGTTATTATGGTTGCAAATGCAGTATTTGGTTCTACTCCAAATATTTCCAGTGACATTCTAGAGAAGTCTTTTCAAATCAATAAAAATGTTATTGGCTACCTTCAAACTAAGTTCTAG

Protein sequence

MAYNACILAISFLALPFFIALAADQSPIQDFCVADTGSTVLLNGLTCKDPKHVVADDFSFGGLHLAANTSNALGCHVTPVTPSEMPGLNTLGISIIRIDYAPRGINPLHTHPRASEILIVLEGSLEVGFITSYPENRHIGKVLQKGDVFVFPIGLVHYQRNPGPTNAVAIAALSSQNPGVIMVANAVFGSTPNISSDILEKSFQINKNVIGYLQTKF
Homology
[Close]
BLAST of Cp4.1LG20g05740 vs. Swiss-Prot
Match: GL22_ORYSJ (Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 4.0e-68
Identity = 125/198 (63.13%), Postives = 152/198 (76.77%), Query Frame = 1 

Query: 20  ALAADQSPIQDFCVADTGSTVLLNGLTCKDPKHVVADDFSFGGLHLAANTSNALGCHVTP 79
           A+A+D   +QDFCV D  S V +NG  CKD K VVA DF F GLH+A NT+N  G +VT 
Sbjct: 26  AIASDPGLLQDFCVVDKMSQVRVNGFPCKDAKDVVAGDFFFSGLHMAGNTTNKQGSNVTT 85

Query: 80  VTPSEMPGLNTLGISIIRIDYAPRGINPLHTHPRASEILIVLEGSLEVGFITSYPENRHI 139
           V  +++PGLNT+G+S++RIDYAP G+NP HTHPRA+EI  VLEGSL VGF+ S PEN+  
Sbjct: 86  VNVAQIPGLNTMGVSLVRIDYAPNGLNPPHTHPRATEIPTVLEGSLYVGFVISNPENKLF 145

Query: 140 GKVLQKGDVFVFPIGLVHYQRNPGPTNAVAIAALSSQNPGVIMVANAVFGSTPNISSDIL 199
            KVL KGDVFVFP GLVH+Q N G  NAVA+AALSSQNPGVI V NAVFGS P+IS DIL
Sbjct: 146 TKVLNKGDVFVFPQGLVHFQFNNGTNNAVALAALSSQNPGVITVGNAVFGSKPSISDDIL 205

Query: 200 EKSFQINKNVIGYLQTKF 218
            K+FQ++KN+I  +Q +F
Sbjct: 206 AKAFQVDKNIIDRIQAQF 223

[Close]
BLAST of Cp4.1LG20g05740 vs. Swiss-Prot
Match: GL23_ORYSJ (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 8.8e-68
Identity = 126/197 (63.96%), Postives = 152/197 (77.16%), Query Frame = 1 

Query: 21  LAADQSPIQDFCVADTGSTVLLNGLTCKDPKHVVADDFSFGGLHLAANTSNALGCHVTPV 80
           +A+D S +QD CVAD  STV +NG+ CKD + V A+DF F GLH+A NT+N  G  VT V
Sbjct: 27  VASDPSHLQDLCVADKASTVRVNGVACKDGEDVAAEDFFFSGLHMAGNTTNKQGSAVTAV 86

Query: 81  TPSEMPGLNTLGISIIRIDYAPRGINPLHTHPRASEILIVLEGSLEVGFITSYPENRHIG 140
             +++PGLNTLGIS+ RIDYA  G+NP HTHPRA+EIL VLEGSL VGF+TS PEN+   
Sbjct: 87  NVAQVPGLNTLGISLARIDYALHGLNPPHTHPRATEILTVLEGSLYVGFVTSNPENKLFT 146

Query: 141 KVLQKGDVFVFPIGLVHYQRNPGPTNAVAIAALSSQNPGVIMVANAVFGSTPNISSDILE 200
           KV+ KGDVFVFP GLVH+Q N G T+AVAI ALSSQNPGVI VANAVFGS P+I+ DIL 
Sbjct: 147 KVINKGDVFVFPKGLVHFQFNYGTTDAVAIVALSSQNPGVITVANAVFGSKPSITDDILA 206

Query: 201 KSFQINKNVIGYLQTKF 218
           K+FQ+ K V+  +Q KF
Sbjct: 207 KAFQVEKTVVDQIQAKF 223

[Close]
BLAST of Cp4.1LG20g05740 vs. Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 3.7e-66
Identity = 122/208 (58.65%), Postives = 153/208 (73.56%), Query Frame = 1 

Query: 10  ISFLALPFFIALAADQSPIQDFCVADTGSTVLLNGLTCKDPKHVVADDFSFGGLHLAANT 69
           ++ LA+    A A+D S +QDFCVAD  S VL+NG  CKDP  +  +DF F GLH+A NT
Sbjct: 9   LALLAVSISNAFASDPSQLQDFCVADKMSQVLVNGFACKDPAAITVEDFFFSGLHMAGNT 68

Query: 70  SNALGCHVTPVTPSEMPGLNTLGISIIRIDYAPRGINPLHTHPRASEILIVLEGSLEVGF 129
           SN  G  VT V  +++ GLNTLGIS+ R+DYAP G+NP H HPRA+EIL +LEGSL VGF
Sbjct: 69  SNRQGSAVTGVNVAQISGLNTLGISLARVDYAPYGLNPPHIHPRATEILTILEGSLYVGF 128

Query: 130 ITSYPENRHIGKVLQKGDVFVFPIGLVHYQRNPGPTNAVAIAALSSQNPGVIMVANAVFG 189
           +TS PEN+   KVL KGDVFVFP GL+H+Q N G  + +A+AALSSQNPGVI +ANAVFG
Sbjct: 129 VTSNPENKLFTKVLNKGDVFVFPQGLIHFQFNYGTKDVIALAALSSQNPGVITIANAVFG 188

Query: 190 STPNISSDILEKSFQINKNVIGYLQTKF 218
           S P IS DIL K+FQ+ K ++  +Q +F
Sbjct: 189 SKPFISDDILAKAFQVEKKIVDRIQAQF 216

[Close]
BLAST of Cp4.1LG20g05740 vs. Swiss-Prot
Match: GL89_ORYSJ (Germin-like protein 8-9 OS=Oryza sativa subsp. japonica GN=Os08g0189850 PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 3.5e-64
Identity = 127/218 (58.26%), Postives = 155/218 (71.10%), Query Frame = 1 

Query: 1   MAYNACILAISFLALPFFIALAADQSPIQDFCVADTGSTVLLNGLTCKDPKHVVADDFSF 60
           MA  +  L  + LAL  + A+A+D SP+QDFCVAD  S VL+NG  C DPK+V AD F  
Sbjct: 1   MASPSFCLFAALLALVSWQAIASDPSPLQDFCVADKHSPVLVNGFACLDPKYVTADHFFK 60

Query: 61  GGLHLAANTSNALGCHVTPVTPSEMPGLNTLGISIIRIDYAPRGINPLHTHPRASEILIV 120
             +      +N +G +VT +   ++PGLNTLGISI RIDYAP G NP HTHPRA+EIL V
Sbjct: 61  AAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTV 120

Query: 121 LEGSLEVGFITSYPENRHIGKVLQKGDVFVFPIGLVHYQRNPGPTN-AVAIAALSSQNPG 180
           LEG+L VGF+TS P N    KVL KGDVFVFP+GL+H+Q NP P   AVAIAALSSQNPG
Sbjct: 121 LEGTLHVGFVTSNPNNTLFSKVLNKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNPG 180

Query: 181 VIMVANAVFGSTPNISSDILEKSFQINKNVIGYLQTKF 218
           VI +ANAVFGS P IS ++L K+FQ+ K  I +LQ +F
Sbjct: 181 VITIANAVFGSKPPISDEVLAKAFQVGKGTIDWLQAQF 218

[Close]
BLAST of Cp4.1LG20g05740 vs. Swiss-Prot
Match: GL811_ORYSJ (Germin-like protein 8-11 OS=Oryza sativa subsp. japonica GN=Os08g0190100 PE=1 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.0e-63
Identity = 124/218 (56.88%), Postives = 156/218 (71.56%), Query Frame = 1 

Query: 1   MAYNACILAISFLALPFFIALAADQSPIQDFCVADTGSTVLLNGLTCKDPKHVVADDFSF 60
           MA ++ +L  + LA+  +  +A+D SP+QDFCVAD  S VL+NG  C +PK V AD F  
Sbjct: 1   MASSSFLLLATLLAMASWQGMASDPSPLQDFCVADMHSPVLVNGFACLNPKDVNADHFFK 60

Query: 61  GGLHLAANTSNALGCHVTPVTPSEMPGLNTLGISIIRIDYAPRGINPLHTHPRASEILIV 120
             +      +N +G +VT +   ++PGLNTLGISI RIDYAP G NP HTHPRA+EIL V
Sbjct: 61  AAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTV 120

Query: 121 LEGSLEVGFITSYPENRHIGKVLQKGDVFVFPIGLVHYQRNPGPTN-AVAIAALSSQNPG 180
           LEG+L VGF+TS P+N+   KVL KGDVFVFP+GL+H+Q NP P   AVAIAALSSQNPG
Sbjct: 121 LEGTLYVGFVTSNPDNKFFSKVLNKGDVFVFPVGLIHFQFNPNPYKPAVAIAALSSQNPG 180

Query: 181 VIMVANAVFGSTPNISSDILEKSFQINKNVIGYLQTKF 218
            I +ANAVFGS P IS D+L K+FQ+ K  I +LQ +F
Sbjct: 181 AITIANAVFGSKPPISDDVLAKAFQVEKGTIDWLQAQF 218

[Close]
BLAST of Cp4.1LG20g05740 vs. TrEMBL
Match: A0A0A0LXZ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G537570 PE=3 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 2.7e-108
Identity = 194/217 (89.40%), Postives = 203/217 (93.55%), Query Frame = 1 

Query: 1   MAYNACILAISFLALPFFIALAADQSPIQDFCVADTGSTVLLNGLTCKDPKHVVADDFSF 60
           MA N CIL ISFLA  FF   A+DQ+PIQDFCVAD G+TVLLNGLTCKDPK VVADDFSF
Sbjct: 1   MASNGCILTISFLAFSFFAVFASDQNPIQDFCVADNGTTVLLNGLTCKDPKQVVADDFSF 60

Query: 61  GGLHLAANTSNALGCHVTPVTPSEMPGLNTLGISIIRIDYAPRGINPLHTHPRASEILIV 120
           GGLH+AANTSNALGCHVTPVTP EMPGLNTLGISI+RIDYAP+GINPLHTHPRASEILIV
Sbjct: 61  GGLHIAANTSNALGCHVTPVTPLEMPGLNTLGISIVRIDYAPQGINPLHTHPRASEILIV 120

Query: 121 LEGSLEVGFITSYPENRHIGKVLQKGDVFVFPIGLVHYQRNPGPTNAVAIAALSSQNPGV 180
           LEGSLEVGFITS+PENRHIGKVLQKGD FVFP+GLVHYQRNPGPTNAVAIAALSSQNPGV
Sbjct: 121 LEGSLEVGFITSFPENRHIGKVLQKGDAFVFPVGLVHYQRNPGPTNAVAIAALSSQNPGV 180

Query: 181 IMVANAVFGSTPNISSDILEKSFQINKNVIGYLQTKF 218
           I+VANAVFGSTPNISSDILEKSFQINK VIGYLQ KF
Sbjct: 181 IIVANAVFGSTPNISSDILEKSFQINKQVIGYLQNKF 217

[Close]
BLAST of Cp4.1LG20g05740 vs. TrEMBL
Match: B9N5Q7_POPTR (Germin-like protein 1 OS=Populus trichocarpa GN=POPTR_0011s16610g PE=3 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.8e-80
Identity = 153/211 (72.51%), Postives = 174/211 (82.46%), Query Frame = 1 

Query: 7   ILAISFLALPFFIALAADQSPIQDFCVADTGSTVLLNGLTCKDPKHVVADDFSFGGLHLA 66
           IL   FLAL F  ALA+D   +QDFCVAD  S V++NGL CKDPK V ADDFSF GLHLA
Sbjct: 5   ILFFGFLALSFIHALASDPGSLQDFCVADETSNVIVNGLACKDPKMVQADDFSFSGLHLA 64

Query: 67  ANTSNALGCHVTPVTPSEMPGLNTLGISIIRIDYAPRGINPLHTHPRASEILIVLEGSLE 126
            NTSNA+G  VT V  +++PGLNTLGIS++RIDYAP GINP HTHPR +EIL V+EGSLE
Sbjct: 65  GNTSNAVGSRVTTVNVAQIPGLNTLGISLVRIDYAPWGINPPHTHPRGTEILTVIEGSLE 124

Query: 127 VGFITSYPENRHIGKVLQKGDVFVFPIGLVHYQRNPGPTNAVAIAALSSQNPGVIMVANA 186
           VGF+TS PENR I KVLQKGDVFVFPIGLVH+QR+ G  NAVAIAALSSQNPGVI +ANA
Sbjct: 125 VGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRSVGNGNAVAIAALSSQNPGVITIANA 184

Query: 187 VFGSTPNISSDILEKSFQINKNVIGYLQTKF 218
           VFGSTP I SDIL K+FQ++KNV+ YLQ+KF
Sbjct: 185 VFGSTPEIPSDILVKAFQLDKNVVNYLQSKF 215

[Close]
BLAST of Cp4.1LG20g05740 vs. TrEMBL
Match: B9N5Q0_POPTR (Germin-like protein 1 OS=Populus trichocarpa GN=POPTR_0011s16670g PE=3 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.6e-79
Identity = 150/211 (71.09%), Postives = 171/211 (81.04%), Query Frame = 1 

Query: 7   ILAISFLALPFFIALAADQSPIQDFCVADTGSTVLLNGLTCKDPKHVVADDFSFGGLHLA 66
           IL   FLA      LA+D S +QDFCVAD  S V++NGL CKDPK V ADDFSF GLHLA
Sbjct: 5   ILFFGFLAFSLSYVLASDPSSLQDFCVADENSNVIVNGLACKDPKEVQADDFSFSGLHLA 64

Query: 67  ANTSNALGCHVTPVTPSEMPGLNTLGISIIRIDYAPRGINPLHTHPRASEILIVLEGSLE 126
            NTSNA+G   T V  +++PGLNTLGIS++RIDYAP GINP HTHPR SEIL V+EGSLE
Sbjct: 65  GNTSNAVGSRATTVNVAQIPGLNTLGISLVRIDYAPWGINPPHTHPRGSEILTVIEGSLE 124

Query: 127 VGFITSYPENRHIGKVLQKGDVFVFPIGLVHYQRNPGPTNAVAIAALSSQNPGVIMVANA 186
           VGF+TS PENR I KVLQKGDVFVFPIGLVH+QRN G  NAVAIAALSSQNPGVI +ANA
Sbjct: 125 VGFVTSSPENRLITKVLQKGDVFVFPIGLVHFQRNVGNGNAVAIAALSSQNPGVITIANA 184

Query: 187 VFGSTPNISSDILEKSFQINKNVIGYLQTKF 218
           +FGSTP I SDIL K+FQ++KNV+ YLQ++F
Sbjct: 185 MFGSTPEIPSDILVKAFQLDKNVVNYLQSRF 215

[Close]
BLAST of Cp4.1LG20g05740 vs. TrEMBL
Match: B9N5Q5_POPTR (Germin-like protein 1 OS=Populus trichocarpa GN=POPTR_0011s16620g PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 7.7e-79
Identity = 151/213 (70.89%), Postives = 171/213 (80.28%), Query Frame = 1 

Query: 5   ACILAISFLALPFFIALAADQSPIQDFCVADTGSTVLLNGLTCKDPKHVVADDFSFGGLH 64
           A I+   FLAL F  ALA+D SP+QDFCVA     VL+NGL CKDPK V A DFSF GLH
Sbjct: 3   ASIIFFGFLALSFSFALASDPSPLQDFCVAGGDGNVLVNGLACKDPKSVQASDFSFSGLH 62

Query: 65  LAANTSNALGCHVTPVTPSEMPGLNTLGISIIRIDYAPRGINPLHTHPRASEILIVLEGS 124
           +  NTSNA+G  VT V  +++PGLNTLGIS  RIDYAP GINP HTHPRASEIL VLEGS
Sbjct: 63  MLGNTSNAVGSRVTAVNVAQIPGLNTLGISFARIDYAPAGINPPHTHPRASEILTVLEGS 122

Query: 125 LEVGFITSYPENRHIGKVLQKGDVFVFPIGLVHYQRNPGPTNAVAIAALSSQNPGVIMVA 184
           LEVGF+TS PENR I KVLQKGDVFVFPI LVH+QRN G +NAVA+AALSSQNPGVI +A
Sbjct: 123 LEVGFVTSNPENRLITKVLQKGDVFVFPINLVHFQRNVGTSNAVALAALSSQNPGVITIA 182

Query: 185 NAVFGSTPNISSDILEKSFQINKNVIGYLQTKF 218
           NAVFGS P+I SDIL K+FQ++KNV+  LQ+KF
Sbjct: 183 NAVFGSNPDIPSDILAKAFQLHKNVVNSLQSKF 215

[Close]
BLAST of Cp4.1LG20g05740 vs. TrEMBL
Match: M5X1C2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018894mg PE=3 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 1.9e-77
Identity = 145/207 (70.05%), Postives = 170/207 (82.13%), Query Frame = 1 

Query: 11  SFLALPFFIALAADQSPIQDFCVADTGSTVLLNGLTCKDPKHVVADDFSFGGLHLAANTS 70
           +F+A+   IALA D S +QDFCVAD   +VL+NGL CKDPK V A DFSFGGLHL  NTS
Sbjct: 9   AFIAITCSIALATDPSSLQDFCVADPVRSVLVNGLACKDPKTVEAADFSFGGLHLEGNTS 68

Query: 71  NALGCHVTPVTPSEMPGLNTLGISIIRIDYAPRGINPLHTHPRASEILIVLEGSLEVGFI 130
           N +G  VTPVT  ++PGLNTLGIS++RIDYAP G+NP HTHPRASEI+ VLEGSLEVGF+
Sbjct: 69  NPIGSSVTPVTVFQLPGLNTLGISLVRIDYAPSGVNPPHTHPRASEIITVLEGSLEVGFV 128

Query: 131 TSYPENRHIGKVLQKGDVFVFPIGLVHYQRNPGPTNAVAIAALSSQNPGVIMVANAVFGS 190
           TS PENRHI KVLQKGDVFVFPIGLVHYQRN G  +AVAI ALSSQNPGV+++A+AVFGS
Sbjct: 129 TSSPENRHITKVLQKGDVFVFPIGLVHYQRNVGSGHAVAIVALSSQNPGVVIIASAVFGS 188

Query: 191 TPNISSDILEKSFQINKNVIGYLQTKF 218
            P I++DIL K+F ++K VI YL + F
Sbjct: 189 KPCIANDILVKAFHVDKGVINYLHSIF 215

[Close]
BLAST of Cp4.1LG20g05740 vs. TAIR10
Match: AT3G05950.1 (AT3G05950.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 237.7 bits (605), Expect = 6.9e-63
Identity = 119/207 (57.49%), Postives = 152/207 (73.43%), Query Frame = 1 

Query: 13  LALPFFIALAADQSPIQDFCVA-DTGSTVLLNGLTCKDPKHVVADDFSFGGLHLAANTSN 72
           LAL        D SP+QDFCVA D  S V +NG  CKDPK+V A+DF   GL++A NT N
Sbjct: 15  LALASSFVSCYDPSPLQDFCVAVDDASGVFVNGKFCKDPKYVKAEDFFTSGLNIAGNTIN 74

Query: 73  ALGCHVTPVTPSEMPGLNTLGISIIRIDYAPRGINPLHTHPRASEILIVLEGSLEVGFIT 132
            +G +VT V   ++PGLNTLG+S++RID+AP G NP HTHPRA+EIL+V+EG+L VGF+T
Sbjct: 75  RVGSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVVVEGTLLVGFVT 134

Query: 133 SYPE-NRHIGKVLQKGDVFVFPIGLVHYQRNPGPTNAVAIAALSSQNPGVIMVANAVFGS 192
           S  + NR   KVL  GDVFVFPIG++H+Q N G TNAVA A L SQNPG I +A+AVFGS
Sbjct: 135 SNQDNNRLFSKVLYPGDVFVFPIGMIHFQVNVGRTNAVAFAGLGSQNPGTITIADAVFGS 194

Query: 193 TPNISSDILEKSFQINKNVIGYLQTKF 218
            P+I  +IL K+FQ++ NV+ YL+ +F
Sbjct: 195 KPSIMPEILAKAFQLDVNVVKYLEARF 221

[Close]
BLAST of Cp4.1LG20g05740 vs. TAIR10
Match: AT5G38940.1 (AT5G38940.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 231.5 bits (589), Expect = 5.0e-61
Identity = 120/213 (56.34%), Postives = 150/213 (70.42%), Query Frame = 1 

Query: 7   ILAISFLALPFFIALAADQSPIQDFCVADTGST--VLLNGLTCKDPKHVVADDFSFGGLH 66
           +  +S LAL   +A+A+D S +QDFCV+   S   V +NG  CKDPK V ADDF F GL 
Sbjct: 9   LAVLSLLALTLPLAIASDPSQLQDFCVSANTSANGVFVNGKFCKDPKLVTADDFFFSGLQ 68

Query: 67  LAANTSNALGCHVTPVTPSEMPGLNTLGISIIRIDYAPRGINPLHTHPRASEILIVLEGS 126
            A   ++ +G  VT V  + + GLNTLGIS++RIDYA  G NP HTHPRA+EIL+V +G+
Sbjct: 69  TARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRATEILVVEQGT 128

Query: 127 LEVGFITSYPENRHIGKVLQKGDVFVFPIGLVHYQRNPGPTNAVAIAALSSQNPGVIMVA 186
           L VGF+TS P+NR   KVL +GDVFVFP GL+H+Q N G   AVA AALSSQNPGVI +A
Sbjct: 129 LLVGFVTSNPDNRLFSKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIA 188

Query: 187 NAVFGSTPNISSDILEKSFQINKNVIGYLQTKF 218
           N VFG+ P I+  IL K+FQ+N  V+  LQTKF
Sbjct: 189 NTVFGANPAINPTILAKAFQLNPRVVMDLQTKF 221

[Close]
BLAST of Cp4.1LG20g05740 vs. TAIR10
Match: AT5G39110.1 (AT5G39110.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 229.2 bits (583), Expect = 2.5e-60
Identity = 118/220 (53.64%), Postives = 156/220 (70.91%), Query Frame = 1 

Query: 1   MAYNACILAISFLALPFFIALAADQSPIQDFCVA--DTGSTVLLNGLTCKDPKHVVADDF 60
           M ++  ++ I+  AL    A A D SP+QDFCVA  D  + V +NG  CKDPK   A+DF
Sbjct: 1   MRFSKSLILITLSALVISFAEANDPSPLQDFCVAIGDLKNGVFVNGKFCKDPKQAKAEDF 60

Query: 61  SFGGLHLAANTSNALGCHVTPVTPSEMPGLNTLGISIIRIDYAPRGINPLHTHPRASEIL 120
            + GL+ A  T+N +  +VT V   ++PGLNTLGIS++RIDYAP G NP HTHPRA+EIL
Sbjct: 61  FYSGLNQAGTTNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEIL 120

Query: 121 IVLEGSLEVGFITSYPE-NRHIGKVLQKGDVFVFPIGLVHYQRNPGPTNAVAIAALSSQN 180
           +++EG+L VGF++S  + NR   KVL  GDVFVFPIG++H+Q N G T AVA A LSSQN
Sbjct: 121 VLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQN 180

Query: 181 PGVIMVANAVFGSTPNISSDILEKSFQINKNVIGYLQTKF 218
            GVI +A+ VFGSTP I+ DIL ++FQ++ NV+  L+ KF
Sbjct: 181 AGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKF 220

[Close]
BLAST of Cp4.1LG20g05740 vs. TAIR10
Match: AT5G38960.1 (AT5G38960.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 227.3 bits (578), Expect = 9.4e-60
Identity = 118/218 (54.13%), Postives = 152/218 (69.72%), Query Frame = 1 

Query: 3   YNACILAISFLALPFFIALAADQSPIQDFCVA--DTGSTVLLNGLTCKDPKHVVADDFSF 62
           Y A +  ++   LPF  A+A+D SP+QDFC+      + + +NG  CKDPK V ADDF F
Sbjct: 5   YLAILYLLAASTLPF--AIASDPSPLQDFCIGVNTPANALFVNGKFCKDPKLVTADDFYF 64

Query: 63  GGLHLAANT-SNALGCHVTPVTPSEMPGLNTLGISIIRIDYAPRGINPLHTHPRASEILI 122
            GL  A  T S+ +G +VT V  +++PGLNTLGIS++RIDY   G NP HTHPRA+EIL+
Sbjct: 65  SGLDKARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILL 124

Query: 123 VLEGSLEVGFITSYPENRHIGKVLQKGDVFVFPIGLVHYQRNPGPTNAVAIAALSSQNPG 182
           V EG+L VGF +S+PENR   K L KGDVFVFP GL+H+Q N G   AVA A+LSSQNPG
Sbjct: 125 VQEGTLFVGFFSSFPENRLFNKTLNKGDVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPG 184

Query: 183 VIMVANAVFGSTPNISSDILEKSFQINKNVIGYLQTKF 218
           VI++ N +FGS P I  ++L K+FQ++  VI  LQ KF
Sbjct: 185 VIIIGNTLFGSKPPIDPNVLAKAFQLDPKVIIQLQKKF 220

[Close]
BLAST of Cp4.1LG20g05740 vs. TAIR10
Match: AT5G39160.1 (AT5G39160.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 225.7 bits (574), Expect = 2.7e-59
Identity = 115/219 (52.51%), Postives = 151/219 (68.95%), Query Frame = 1 

Query: 1   MAYNACILAISFLALPFFIALAADQSPIQDFCVA-DTGSTVLLNGLTCKDPKHVVADDFS 60
           M  +  ++  + +AL      A D SP+QDFCVA D    V +NG  CKDPK V A DF 
Sbjct: 1   MRVSQSLVPFAIIALVLSFVNAYDPSPLQDFCVAIDDLKGVFVNGRFCKDPKRVDAKDFF 60

Query: 61  FGGLHLAANTSNALGCHVTPVTPSEMPGLNTLGISIIRIDYAPRGINPLHTHPRASEILI 120
           F GL++  NT+N +G +VT V   ++PGLNT+GIS++RIDYAP G NP HTHPR SEIL+
Sbjct: 61  FSGLNMPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILV 120

Query: 121 VLEGSLEVGFITSYPE-NRHIGKVLQKGDVFVFPIGLVHYQRNPGPTNAVAIAALSSQNP 180
           ++EG+L VGF++S  + NR   KVL  GDVFVFPIG++H+Q N G   AVA A LSSQN 
Sbjct: 121 LVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNA 180

Query: 181 GVIMVANAVFGSTPNISSDILEKSFQINKNVIGYLQTKF 218
           GVI +AN VFGS P I  ++L ++FQ++ +V+  LQ KF
Sbjct: 181 GVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKF 219

[Close]
BLAST of Cp4.1LG20g05740 vs. NCBI nr
Match: gi|659068646|ref|XP_008445501.1| (PREDICTED: putative germin-like protein 2-1 isoform X1 [Cucumis melo])

HSP 1 Score: 406.8 bits (1044), Expect = 2.4e-110
Identity = 198/217 (91.24%), Postives = 207/217 (95.39%), Query Frame = 1 

Query: 1   MAYNACILAISFLALPFFIALAADQSPIQDFCVADTGSTVLLNGLTCKDPKHVVADDFSF 60
           MA N CIL ISFLA  FF+ALA+DQ+PIQDFCVAD G+TVLLNGLTCKDPK VVADDFSF
Sbjct: 1   MASNGCILTISFLAFSFFVALASDQNPIQDFCVADNGTTVLLNGLTCKDPKQVVADDFSF 60

Query: 61  GGLHLAANTSNALGCHVTPVTPSEMPGLNTLGISIIRIDYAPRGINPLHTHPRASEILIV 120
           GGLH+AANTSNALGC VTPVTPSEMPGLNTLGISI+RIDYAPRGINPLHTHPRASEILIV
Sbjct: 61  GGLHIAANTSNALGCQVTPVTPSEMPGLNTLGISIVRIDYAPRGINPLHTHPRASEILIV 120

Query: 121 LEGSLEVGFITSYPENRHIGKVLQKGDVFVFPIGLVHYQRNPGPTNAVAIAALSSQNPGV 180
           LEGSLEVGFITS+PENRHIGKVLQKGD FVFP+GLVHYQRNPGPTNAVAIAALSSQNPGV
Sbjct: 121 LEGSLEVGFITSFPENRHIGKVLQKGDAFVFPVGLVHYQRNPGPTNAVAIAALSSQNPGV 180

Query: 181 IMVANAVFGSTPNISSDILEKSFQINKNVIGYLQTKF 218
           I+VANAVFGSTPNISSDILEKSFQINK VIGYLQTKF
Sbjct: 181 IIVANAVFGSTPNISSDILEKSFQINKQVIGYLQTKF 217

[Close]
BLAST of Cp4.1LG20g05740 vs. NCBI nr
Match: gi|449435892|ref|XP_004135728.1| (PREDICTED: putative germin-like protein 2-1 [Cucumis sativus])

HSP 1 Score: 399.4 bits (1025), Expect = 3.9e-108
Identity = 194/217 (89.40%), Postives = 203/217 (93.55%), Query Frame = 1 

Query: 1   MAYNACILAISFLALPFFIALAADQSPIQDFCVADTGSTVLLNGLTCKDPKHVVADDFSF 60
           MA N CIL ISFLA  FF   A+DQ+PIQDFCVAD G+TVLLNGLTCKDPK VVADDFSF
Sbjct: 1   MASNGCILTISFLAFSFFAVFASDQNPIQDFCVADNGTTVLLNGLTCKDPKQVVADDFSF 60

Query: 61  GGLHLAANTSNALGCHVTPVTPSEMPGLNTLGISIIRIDYAPRGINPLHTHPRASEILIV 120
           GGLH+AANTSNALGCHVTPVTP EMPGLNTLGISI+RIDYAP+GINPLHTHPRASEILIV
Sbjct: 61  GGLHIAANTSNALGCHVTPVTPLEMPGLNTLGISIVRIDYAPQGINPLHTHPRASEILIV 120

Query: 121 LEGSLEVGFITSYPENRHIGKVLQKGDVFVFPIGLVHYQRNPGPTNAVAIAALSSQNPGV 180
           LEGSLEVGFITS+PENRHIGKVLQKGD FVFP+GLVHYQRNPGPTNAVAIAALSSQNPGV
Sbjct: 121 LEGSLEVGFITSFPENRHIGKVLQKGDAFVFPVGLVHYQRNPGPTNAVAIAALSSQNPGV 180

Query: 181 IMVANAVFGSTPNISSDILEKSFQINKNVIGYLQTKF 218
           I+VANAVFGSTPNISSDILEKSFQINK VIGYLQ KF
Sbjct: 181 IIVANAVFGSTPNISSDILEKSFQINKQVIGYLQNKF 217

[Close]
BLAST of Cp4.1LG20g05740 vs. NCBI nr
Match: gi|659068648|ref|XP_008445510.1| (PREDICTED: putative germin-like protein 2-2 isoform X2 [Cucumis melo])

HSP 1 Score: 350.5 bits (898), Expect = 2.1e-93
Identity = 169/180 (93.89%), Postives = 175/180 (97.22%), Query Frame = 1 

Query: 38  STVLLNGLTCKDPKHVVADDFSFGGLHLAANTSNALGCHVTPVTPSEMPGLNTLGISIIR 97
           + VLLNGLTCKDPK VVADDFSFGGLH+AANTSNALGC VTPVTPSEMPGLNTLGISI+R
Sbjct: 7   NAVLLNGLTCKDPKQVVADDFSFGGLHIAANTSNALGCQVTPVTPSEMPGLNTLGISIVR 66

Query: 98  IDYAPRGINPLHTHPRASEILIVLEGSLEVGFITSYPENRHIGKVLQKGDVFVFPIGLVH 157
           IDYAPRGINPLHTHPRASEILIVLEGSLEVGFITS+PENRHIGKVLQKGD FVFP+GLVH
Sbjct: 67  IDYAPRGINPLHTHPRASEILIVLEGSLEVGFITSFPENRHIGKVLQKGDAFVFPVGLVH 126

Query: 158 YQRNPGPTNAVAIAALSSQNPGVIMVANAVFGSTPNISSDILEKSFQINKNVIGYLQTKF 217
           YQRNPGPTNAVAIAALSSQNPGVI+VANAVFGSTPNISSDILEKSFQINK VIGYLQTKF
Sbjct: 127 YQRNPGPTNAVAIAALSSQNPGVIIVANAVFGSTPNISSDILEKSFQINKQVIGYLQTKF 186

[Close]
BLAST of Cp4.1LG20g05740 vs. NCBI nr
Match: gi|743886186|ref|XP_011037778.1| (PREDICTED: putative germin-like protein 2-1 [Populus euphratica])

HSP 1 Score: 308.1 bits (788), Expect = 1.2e-80
Identity = 153/211 (72.51%), Postives = 175/211 (82.94%), Query Frame = 1 

Query: 7   ILAISFLALPFFIALAADQSPIQDFCVADTGSTVLLNGLTCKDPKHVVADDFSFGGLHLA 66
           I+   FLAL F  ALA+D S +QDFCVAD    V++NGL CKDPK V ADDFSF GLHLA
Sbjct: 5   IIFFGFLALSFIHALASDPSSLQDFCVADETRNVIVNGLACKDPKMVQADDFSFSGLHLA 64

Query: 67  ANTSNALGCHVTPVTPSEMPGLNTLGISIIRIDYAPRGINPLHTHPRASEILIVLEGSLE 126
            NTSNA+G  VT V+ +++PGLNTLGIS++RIDYAP GINP HTHPR +EIL V+EGSLE
Sbjct: 65  GNTSNAVGSRVTTVSVAQIPGLNTLGISLVRIDYAPWGINPPHTHPRGTEILTVIEGSLE 124

Query: 127 VGFITSYPENRHIGKVLQKGDVFVFPIGLVHYQRNPGPTNAVAIAALSSQNPGVIMVANA 186
           VGF+TS PENR I KVLQKGDVFVFPIGLVH+QRN G  NAVAIAALSSQNPGVI +ANA
Sbjct: 125 VGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGNGNAVAIAALSSQNPGVITIANA 184

Query: 187 VFGSTPNISSDILEKSFQINKNVIGYLQTKF 218
           VFGSTP I SDIL K+FQ++KNV+ YLQ+KF
Sbjct: 185 VFGSTPEIPSDILVKAFQLDKNVVNYLQSKF 215

[Close]
BLAST of Cp4.1LG20g05740 vs. NCBI nr
Match: gi|566195863|ref|XP_006377949.1| (germin-like protein 1 [Populus trichocarpa])

HSP 1 Score: 307.0 bits (785), Expect = 2.6e-80
Identity = 153/211 (72.51%), Postives = 174/211 (82.46%), Query Frame = 1 

Query: 7   ILAISFLALPFFIALAADQSPIQDFCVADTGSTVLLNGLTCKDPKHVVADDFSFGGLHLA 66
           IL   FLAL F  ALA+D   +QDFCVAD  S V++NGL CKDPK V ADDFSF GLHLA
Sbjct: 5   ILFFGFLALSFIHALASDPGSLQDFCVADETSNVIVNGLACKDPKMVQADDFSFSGLHLA 64

Query: 67  ANTSNALGCHVTPVTPSEMPGLNTLGISIIRIDYAPRGINPLHTHPRASEILIVLEGSLE 126
            NTSNA+G  VT V  +++PGLNTLGIS++RIDYAP GINP HTHPR +EIL V+EGSLE
Sbjct: 65  GNTSNAVGSRVTTVNVAQIPGLNTLGISLVRIDYAPWGINPPHTHPRGTEILTVIEGSLE 124

Query: 127 VGFITSYPENRHIGKVLQKGDVFVFPIGLVHYQRNPGPTNAVAIAALSSQNPGVIMVANA 186
           VGF+TS PENR I KVLQKGDVFVFPIGLVH+QR+ G  NAVAIAALSSQNPGVI +ANA
Sbjct: 125 VGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRSVGNGNAVAIAALSSQNPGVITIANA 184

Query: 187 VFGSTPNISSDILEKSFQINKNVIGYLQTKF 218
           VFGSTP I SDIL K+FQ++KNV+ YLQ+KF
Sbjct: 185 VFGSTPEIPSDILVKAFQLDKNVVNYLQSKF 215

The following BLAST results are available for this feature:
BLAST of Cp4.1LG20g05740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GL22_ORYSJ4.0e-6863.13Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700... [more]
GL23_ORYSJ8.8e-6863.96Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800... [more]
GL21_ORYSJ3.7e-6658.65Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600... [more]
GL89_ORYSJ3.5e-6458.26Germin-like protein 8-9 OS=Oryza sativa subsp. japonica GN=Os08g0189850 PE=2 SV=... [more]
GL811_ORYSJ1.0e-6356.88Germin-like protein 8-11 OS=Oryza sativa subsp. japonica GN=Os08g0190100 PE=1 SV... [more]
BLAST of Cp4.1LG20g05740 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXZ5_CUCSA2.7e-10889.40Uncharacterized protein OS=Cucumis sativus GN=Csa_1G537570 PE=3 SV=1[more]
B9N5Q7_POPTR1.8e-8072.51Germin-like protein 1 OS=Populus trichocarpa GN=POPTR_0011s16610g PE=3 SV=1[more]
B9N5Q0_POPTR1.6e-7971.09Germin-like protein 1 OS=Populus trichocarpa GN=POPTR_0011s16670g PE=3 SV=1[more]
B9N5Q5_POPTR7.7e-7970.89Germin-like protein 1 OS=Populus trichocarpa GN=POPTR_0011s16620g PE=3 SV=1[more]
M5X1C2_PRUPE1.9e-7770.05Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018894mg PE=3 SV=1[more]
BLAST of Cp4.1LG20g05740 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G05950.16.9e-6357.49 RmlC-like cupins superfamily protein[more]
AT5G38940.15.0e-6156.34 RmlC-like cupins superfamily protein[more]
AT5G39110.12.5e-6053.64 RmlC-like cupins superfamily protein[more]
AT5G38960.19.4e-6054.13 RmlC-like cupins superfamily protein[more]
AT5G39160.12.7e-5952.51 RmlC-like cupins superfamily protein[more]
BLAST of Cp4.1LG20g05740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659068646|ref|XP_008445501.1|2.4e-11091.24PREDICTED: putative germin-like protein 2-1 isoform X1 [Cucumis melo][more]
gi|449435892|ref|XP_004135728.1|3.9e-10889.40PREDICTED: putative germin-like protein 2-1 [Cucumis sativus][more]
gi|659068648|ref|XP_008445510.1|2.1e-9393.89PREDICTED: putative germin-like protein 2-2 isoform X2 [Cucumis melo][more]
gi|743886186|ref|XP_011037778.1|1.2e-8072.51PREDICTED: putative germin-like protein 2-1 [Populus euphratica][more]
gi|566195863|ref|XP_006377949.1|2.6e-8072.51germin-like protein 1 [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0045735nutrient reservoir activity
GO:0030145manganese ion binding
Vocabulary: INTERPRO
TermDefinition
IPR019780Germin_Mn-BS
IPR014710RmlC-like_jellyroll
IPR011051RmlC_Cupin_sf
IPR006045Cupin_1
IPR001929Germin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0019430 removal of superoxide radicals
cellular_component GO:0005576 extracellular region
cellular_component GO:0005618 cell wall
cellular_component GO:0005575 cellular_component
molecular_function GO:0030145 manganese ion binding
molecular_function GO:0045735 nutrient reservoir activity
molecular_function GO:0004784 superoxide dismutase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG20g05740.1Cp4.1LG20g05740.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001929GerminPRINTSPR00325GERMINcoord: 174..189
score: 9.4E-27coord: 109..129
score: 9.4E-27coord: 141..161
score: 9.4
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 66..209
score: 4.8
IPR006045Cupin 1SMARTSM00835Cupin_1_3coord: 63..211
score: 1.9
IPR011051RmlC-like cupin domainunknownSSF51182RmlC-like cupinscoord: 24..216
score: 8.92
IPR014710RmlC-like jelly roll foldGENE3DG3DSA:2.60.120.10coord: 24..216
score: 6.3
IPR019780Germin, manganese binding sitePROSITEPS00725GERMINcoord: 104..117
scor
NoneNo IPR availablePANTHERPTHR31238FAMILY NOT NAMEDcoord: 2..217
score: 2.6E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG20g05740Cucsa.166950Cucumber (Gy14) v1cgycpeB0464
Cp4.1LG20g05740CmaCh13G004810Cucurbita maxima (Rimu)cmacpeB234
Cp4.1LG20g05740CmaCh18G005150Cucurbita maxima (Rimu)cmacpeB438
Cp4.1LG20g05740CmoCh13G005150Cucurbita moschata (Rifu)cmocpeB201
Cp4.1LG20g05740CmoCh18G004930Cucurbita moschata (Rifu)cmocpeB403
Cp4.1LG20g05740Cla009835Watermelon (97103) v1cpewmB513
Cp4.1LG20g05740Cla019717Watermelon (97103) v1cpewmB504
Cp4.1LG20g05740Csa1G537570Cucumber (Chinese Long) v2cpecuB519
Cp4.1LG20g05740Csa6G525540Cucumber (Chinese Long) v2cpecuB525
Cp4.1LG20g05740MELO3C002829Melon (DHL92) v3.5.1cpemeB477
Cp4.1LG20g05740ClCG01G025240Watermelon (Charleston Gray)cpewcgB450
Cp4.1LG20g05740ClCG03G008230Watermelon (Charleston Gray)cpewcgB464
Cp4.1LG20g05740CSPI01G24860Wild cucumber (PI 183967)cpecpiB521
Cp4.1LG20g05740CSPI06G36930Wild cucumber (PI 183967)cpecpiB527
Cp4.1LG20g05740Lsi02G009570Bottle gourd (USVL1VR-Ls)cpelsiB417
Cp4.1LG20g05740MELO3C007062.2Melon (DHL92) v3.6.1cpemedB572
Cp4.1LG20g05740MELO3C002829.2Melon (DHL92) v3.6.1cpemedB559
Cp4.1LG20g05740CsaV3_1G037180Cucumber (Chinese Long) v3cpecucB0639
Cp4.1LG20g05740CsaV3_6G052430Cucumber (Chinese Long) v3cpecucB0650
Cp4.1LG20g05740Bhi08G000847Wax gourdcpewgoB0651
Cp4.1LG20g05740Bhi03G000153Wax gourdcpewgoB0631
Cp4.1LG20g05740CsGy6G036310Cucumber (Gy14) v2cgybcpeB815
Cp4.1LG20g05740CsGy1G024310Cucumber (Gy14) v2cgybcpeB086
Cp4.1LG20g05740Carg19322Silver-seed gourdcarcpeB0416
Cp4.1LG20g05740Carg21410Silver-seed gourdcarcpeB0553
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG20g05740Cp4.1LG10g06450Cucurbita pepo (Zucchini)cpecpeB088
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG20g05740Cucumber (Chinese Long) v3cpecucB0626
Cp4.1LG20g05740Cucurbita pepo (Zucchini)cpecpeB048
Cp4.1LG20g05740Cucurbita pepo (Zucchini)cpecpeB412
Cp4.1LG20g05740Cucumber (Gy14) v1cgycpeB0040
Cp4.1LG20g05740Cucumber (Gy14) v1cgycpeB0463
Cp4.1LG20g05740Cucurbita maxima (Rimu)cmacpeB675
Cp4.1LG20g05740Cucurbita maxima (Rimu)cmacpeB881
Cp4.1LG20g05740Cucurbita moschata (Rifu)cmocpeB628
Cp4.1LG20g05740Cucurbita moschata (Rifu)cmocpeB818
Cp4.1LG20g05740Wild cucumber (PI 183967)cpecpiB508
Cp4.1LG20g05740Cucumber (Chinese Long) v2cpecuB508
Cp4.1LG20g05740Melon (DHL92) v3.5.1cpemeB485
Cp4.1LG20g05740Cucumber (Gy14) v2cgybcpeB072
Cp4.1LG20g05740Silver-seed gourdcarcpeB0594
Cp4.1LG20g05740Silver-seed gourdcarcpeB1030