Cp4.1LG20g05270 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG20g05270
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG20 : 3045168 .. 3045668 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTGGTTCTTCATTTCCAATGCCCTCATCTTCATCATTGCTGCTGATTATGCCTATTTCTCTCTCACCCAATACAAAAGATCCCATCTTTATGAACATTACTCACCTCCCAACCCAAAGATGACTCATTTTCAACGTCAAACTTCTTCATTTGTAGTATTTGATGAAAAGAGAGAATACCCAGATGGGAATTTGCGAAATTTTGTTCAAGAACGATGCGATTCTATGCCGCTGTTGAAGACGACTCCGGTGAGAACTTACGAGCGGAGCAAGTCGGAGAAACCCAAAAGAAGTGTGTCAAAGGAGAGCAAGAAAAAGATGGCGAAGAGATTAGAAAGTGGCATGTACGAAGAGAAGGAATTAGAAGAAAATGAGTATTCAAAGATGACAGATGAAGAACTGAACAGAAGGGTGGAAGAGTTTATTCAAAGATTTAACACACAAATGAGACTTGAAACTAAATCAGCTGAATTAAAGTCTCATAAAAAGGGCCACTAG

mRNA sequence

ATGTTCTGGTTCTTCATTTCCAATGCCCTCATCTTCATCATTGCTGCTGATTATGCCTATTTCTCTCTCACCCAATACAAAAGATCCCATCTTTATGAACATTACTCACCTCCCAACCCAAAGATGACTCATTTTCAACGTCAAACTTCTTCATTTGTAGTATTTGATGAAAAGAGAGAATACCCAGATGGGAATTTGCGAAATTTTGTTCAAGAACGATGCGATTCTATGCCGCTGTTGAAGACGACTCCGGTGAGAACTTACGAGCGGAGCAAGTCGGAGAAACCCAAAAGAAGTGTGTCAAAGGAGAGCAAGAAAAAGATGGCGAAGAGATTAGAAAGTGGCATGTACGAAGAGAAGGAATTAGAAGAAAATGAGTATTCAAAGATGACAGATGAAGAACTGAACAGAAGGGTGGAAGAGTTTATTCAAAGATTTAACACACAAATGAGACTTGAAACTAAATCAGCTGAATTAAAGTCTCATAAAAAGGGCCACTAG

Coding sequence (CDS)

ATGTTCTGGTTCTTCATTTCCAATGCCCTCATCTTCATCATTGCTGCTGATTATGCCTATTTCTCTCTCACCCAATACAAAAGATCCCATCTTTATGAACATTACTCACCTCCCAACCCAAAGATGACTCATTTTCAACGTCAAACTTCTTCATTTGTAGTATTTGATGAAAAGAGAGAATACCCAGATGGGAATTTGCGAAATTTTGTTCAAGAACGATGCGATTCTATGCCGCTGTTGAAGACGACTCCGGTGAGAACTTACGAGCGGAGCAAGTCGGAGAAACCCAAAAGAAGTGTGTCAAAGGAGAGCAAGAAAAAGATGGCGAAGAGATTAGAAAGTGGCATGTACGAAGAGAAGGAATTAGAAGAAAATGAGTATTCAAAGATGACAGATGAAGAACTGAACAGAAGGGTGGAAGAGTTTATTCAAAGATTTAACACACAAATGAGACTTGAAACTAAATCAGCTGAATTAAAGTCTCATAAAAAGGGCCACTAG

Protein sequence

MFWFFISNALIFIIAADYAYFSLTQYKRSHLYEHYSPPNPKMTHFQRQTSSFVVFDEKREYPDGNLRNFVQERCDSMPLLKTTPVRTYERSKSEKPKRSVSKESKKKMAKRLESGMYEEKELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAELKSHKKGH
BLAST of Cp4.1LG20g05270 vs. TrEMBL
Match: A0A0A0M033_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G435810 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.5e-42
Identity = 112/161 (69.57%), Postives = 122/161 (75.78%), Query Frame = 1

Query: 1   MFWFFISNALIFIIAADYAYFSLTQYKRSHLYE--HYSPPNPKMTHFQRQTSSFVVFDEK 60
           +FWFFISN LIFIIA DY  FSL+Q+K  HLYE  +YSPPNPK+THFQ QTSS VVFDEK
Sbjct: 42  VFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDYYYSPPNPKLTHFQLQTSSLVVFDEK 101

Query: 61  REYPDGNLRNFVQ-ERCDSMPLLKTTPVRTYERSKSEKPKRSVSKESKKKM--AKRLESG 120
           RE PD  L   VQ +R DS     TTPVRTY R KSEKPKR VS E  KKM   +R ES 
Sbjct: 102 RETPDEKLETVVQSQRLDSPSKNTTTPVRTYLRRKSEKPKRIVSMEISKKMMGKRRSESV 161

Query: 121 MYEEKELE-ENEYSKMTDEELNRRVEEFIQRFNTQMRLETK 156
             E KELE ENE++KMTDEELNRRVEEFIQRFN QMRL+TK
Sbjct: 162 KNEGKELEDENEFAKMTDEELNRRVEEFIQRFNKQMRLQTK 202

BLAST of Cp4.1LG20g05270 vs. TrEMBL
Match: A0A067GJD6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039587mg PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.2e-12
Identity = 69/162 (42.59%), Postives = 89/162 (54.94%), Query Frame = 1

Query: 2   FWFFISNALIFIIAADYAYFSLTQYKRSHLYEHYSPPNPKMTHFQRQTSSFVVFDEKREY 61
           FWFFISN LI IIAADY  FS ++  ++ +YE Y      + H Q +  +   F      
Sbjct: 61  FWFFISNTLILIIAADYGAFSSSEGNKNDVYEEY------VMHSQARIVTDKTF------ 120

Query: 62  PDGNLRNFVQERCDSMPLLKTTPVRTYERSKSE-KPKRSV----SKESKKKMAKRLESGM 121
             GN     QE        K    RTY R+KS+ K KRSV    SK S   + +R E+ +
Sbjct: 121 --GNPNESFQE--------KPVEARTYRRTKSDNKTKRSVLIDESKNSTNYILRRSETEV 180

Query: 122 YEEKEL-----EENEYSKMTDEELNRRVEEFIQRFNTQMRLE 154
            EE        EENE+S M++EELNRRVEEFIQ+FN Q+RL+
Sbjct: 181 REEPAAADSCQEENEFSSMSNEELNRRVEEFIQKFNRQIRLQ 200

BLAST of Cp4.1LG20g05270 vs. TrEMBL
Match: M5WIZ9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017601mg PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.4e-11
Identity = 82/202 (40.59%), Postives = 101/202 (50.00%), Query Frame = 1

Query: 2   FWFFISNALIFIIAADYAYFSLTQ--YKRSHLYEHYSPPNPKMTHFQ-RQTSSFV----- 61
           FWF ISN LI IIAADY  FS ++   +  HLY+ Y      M H Q R  SSFV     
Sbjct: 49  FWFAISNTLILIIAADYGAFSSSKDNIQDQHLYQEY------MIHRQARSVSSFVSQYPE 108

Query: 62  ----------------VFDEK---REYPDGNLRNFVQERC-------DSMPL---LKTTP 121
                           V D K    E  D   +  VQE+        D        +   
Sbjct: 109 IAFKKSSCPNKQSEVDVDDMKAKNEEVADTQNKEVVQEKSVVHVSKGDDQNKGCGRENVA 168

Query: 122 VRTYERSKSEKPKR--SVSKESKKKMAKRLESGM-YEEKELEENEYSKMTDEELNRRVEE 164
            +TY+RSKSEK K   +V  E KK + KR E    YE   +E+NE+S M+DEELNRR+EE
Sbjct: 169 AKTYQRSKSEKTKTKGAVIDERKKDILKRSEDEKKYEPNTVEDNEFSVMSDEELNRRIEE 228

BLAST of Cp4.1LG20g05270 vs. TrEMBL
Match: V4TP41_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017572mg PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.6e-10
Identity = 73/198 (36.87%), Postives = 101/198 (51.01%), Query Frame = 1

Query: 2   FWFFISNALIFIIAADYAYFSLTQYKRSHLYEHY-------SPPNPKMTHFQRQTSS--- 61
           FWFFISN LI IIAADY  FS ++  ++ +YE Y       S  +  ++ +Q  +SS   
Sbjct: 61  FWFFISNTLILIIAADYGAFSSSEGNKNDVYEEYVMHSQARSSVSSFVSQYQDISSSKNI 120

Query: 62  --------------------FVVFDEKREYPDGNLR--NFVQERCDSMP----LLKTTPV 121
                                VV D+K +  + + +    V ++    P      K    
Sbjct: 121 INPRKEEAPAEDSPEVKKEVIVVSDQKEKLQENDYKPPQVVTDKTFGNPNESFQEKPVEA 180

Query: 122 RTYERSKSE-KPKRSV----SKESKKKMAKRLESGMYEEKEL-----EENEYSKMTDEEL 154
           RTY R+KS+ K KRSV    SK S   + +R ES + EE        EENE+S M++EEL
Sbjct: 181 RTYRRTKSDNKIKRSVLIDESKNSTNYILRRSESEVREEPAAADSCQEENEFSSMSNEEL 240

BLAST of Cp4.1LG20g05270 vs. TrEMBL
Match: A0A0A0LUF0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G435700 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 7.6e-10
Identity = 64/164 (39.02%), Postives = 88/164 (53.66%), Query Frame = 1

Query: 2   FWFFISNALIFIIAADYAYFSLTQYKRSHLYEHYSPPNPKMTHFQRQTSSFVVFDEKREY 61
           FWFF+SN LIF+IA D   FS         +   + PNP     Q   ++ +V ++    
Sbjct: 52  FWFFLSNTLIFVIALDSGAFSSPSS-----FVPAAKPNPSSP--QHNFNNTIVVNQLPNS 111

Query: 62  PDGNLRNFVQERCD------SMPLLKTTPVRTYERSKSEKP-KRSVSKESKKKMAK---- 121
           P    +N  +E         S P     P++ Y+RSKSEK  KR V K  K +M +    
Sbjct: 112 PIP-AQNEEEETIIPLTTEISFPCKFNNPIKPYQRSKSEKDIKRMVEKAKKVRMRRSKTM 171

Query: 122 -RLESGMYEEKELEENEYSKMTDEELNRRVEEFIQRFNTQMRLE 154
            +      +EKE E +E++KMTDEELNRRVEEFI+RFN Q+RL+
Sbjct: 172 IKQNGTSTKEKEEENDEFTKMTDEELNRRVEEFIERFNRQIRLQ 207

BLAST of Cp4.1LG20g05270 vs. NCBI nr
Match: gi|659068431|ref|XP_008444371.1| (PREDICTED: uncharacterized protein LOC103487717 [Cucumis melo])

HSP 1 Score: 180.6 bits (457), Expect = 2.2e-42
Identity = 109/159 (68.55%), Postives = 123/159 (77.36%), Query Frame = 1

Query: 1   MFWFFISNALIFIIAADYAYFSLTQYKRSHLYE-HYSPPNPKMTHFQRQTSSFVVFDEKR 60
           +FWFFISN LIFIIA DY  FSL+Q+K  HLYE +YSPPNPK+THFQ QTSS VVFDEK+
Sbjct: 73  IFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDYYSPPNPKLTHFQLQTSSLVVFDEKK 132

Query: 61  EYPDGNLRNFVQE-RCDSMPLLKTTPVRTYERSKSEKPKRSVSKE-SKKKMAKRLESGMY 120
           E PD  L   VQ  R DS     TTPVRTY R KS+KPKR VS E SKK M KR ES  Y
Sbjct: 133 ETPDEKLEIVVQSPRLDSPSKKTTTPVRTYRRRKSDKPKRIVSMEISKKMMGKRSESEKY 192

Query: 121 EEKELE-ENEYSKMTDEELNRRVEEFIQRFNTQMRLETK 156
           E +E+E ++E++KMTDEELNRRVEEFIQRFN QMRL+TK
Sbjct: 193 EGQEIEDQSEFAKMTDEELNRRVEEFIQRFNRQMRLQTK 231

BLAST of Cp4.1LG20g05270 vs. NCBI nr
Match: gi|700210440|gb|KGN65536.1| (hypothetical protein Csa_1G435810 [Cucumis sativus])

HSP 1 Score: 180.6 bits (457), Expect = 2.2e-42
Identity = 112/161 (69.57%), Postives = 122/161 (75.78%), Query Frame = 1

Query: 1   MFWFFISNALIFIIAADYAYFSLTQYKRSHLYE--HYSPPNPKMTHFQRQTSSFVVFDEK 60
           +FWFFISN LIFIIA DY  FSL+Q+K  HLYE  +YSPPNPK+THFQ QTSS VVFDEK
Sbjct: 42  VFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDYYYSPPNPKLTHFQLQTSSLVVFDEK 101

Query: 61  REYPDGNLRNFVQ-ERCDSMPLLKTTPVRTYERSKSEKPKRSVSKESKKKM--AKRLESG 120
           RE PD  L   VQ +R DS     TTPVRTY R KSEKPKR VS E  KKM   +R ES 
Sbjct: 102 RETPDEKLETVVQSQRLDSPSKNTTTPVRTYLRRKSEKPKRIVSMEISKKMMGKRRSESV 161

Query: 121 MYEEKELE-ENEYSKMTDEELNRRVEEFIQRFNTQMRLETK 156
             E KELE ENE++KMTDEELNRRVEEFIQRFN QMRL+TK
Sbjct: 162 KNEGKELEDENEFAKMTDEELNRRVEEFIQRFNKQMRLQTK 202

BLAST of Cp4.1LG20g05270 vs. NCBI nr
Match: gi|641856685|gb|KDO75451.1| (hypothetical protein CISIN_1g039587mg [Citrus sinensis])

HSP 1 Score: 79.0 bits (193), Expect = 8.9e-12
Identity = 69/162 (42.59%), Postives = 89/162 (54.94%), Query Frame = 1

Query: 2   FWFFISNALIFIIAADYAYFSLTQYKRSHLYEHYSPPNPKMTHFQRQTSSFVVFDEKREY 61
           FWFFISN LI IIAADY  FS ++  ++ +YE Y      + H Q +  +   F      
Sbjct: 61  FWFFISNTLILIIAADYGAFSSSEGNKNDVYEEY------VMHSQARIVTDKTF------ 120

Query: 62  PDGNLRNFVQERCDSMPLLKTTPVRTYERSKSE-KPKRSV----SKESKKKMAKRLESGM 121
             GN     QE        K    RTY R+KS+ K KRSV    SK S   + +R E+ +
Sbjct: 121 --GNPNESFQE--------KPVEARTYRRTKSDNKTKRSVLIDESKNSTNYILRRSETEV 180

Query: 122 YEEKEL-----EENEYSKMTDEELNRRVEEFIQRFNTQMRLE 154
            EE        EENE+S M++EELNRRVEEFIQ+FN Q+RL+
Sbjct: 181 REEPAAADSCQEENEFSSMSNEELNRRVEEFIQKFNRQIRLQ 200

BLAST of Cp4.1LG20g05270 vs. NCBI nr
Match: gi|595881864|ref|XP_007212500.1| (hypothetical protein PRUPE_ppa017601mg [Prunus persica])

HSP 1 Score: 77.8 bits (190), Expect = 2.0e-11
Identity = 82/202 (40.59%), Postives = 101/202 (50.00%), Query Frame = 1

Query: 2   FWFFISNALIFIIAADYAYFSLTQ--YKRSHLYEHYSPPNPKMTHFQ-RQTSSFV----- 61
           FWF ISN LI IIAADY  FS ++   +  HLY+ Y      M H Q R  SSFV     
Sbjct: 49  FWFAISNTLILIIAADYGAFSSSKDNIQDQHLYQEY------MIHRQARSVSSFVSQYPE 108

Query: 62  ----------------VFDEK---REYPDGNLRNFVQERC-------DSMPL---LKTTP 121
                           V D K    E  D   +  VQE+        D        +   
Sbjct: 109 IAFKKSSCPNKQSEVDVDDMKAKNEEVADTQNKEVVQEKSVVHVSKGDDQNKGCGRENVA 168

Query: 122 VRTYERSKSEKPKR--SVSKESKKKMAKRLESGM-YEEKELEENEYSKMTDEELNRRVEE 164
            +TY+RSKSEK K   +V  E KK + KR E    YE   +E+NE+S M+DEELNRR+EE
Sbjct: 169 AKTYQRSKSEKTKTKGAVIDERKKDILKRSEDEKKYEPNTVEDNEFSVMSDEELNRRIEE 228

BLAST of Cp4.1LG20g05270 vs. NCBI nr
Match: gi|645238202|ref|XP_008225566.1| (PREDICTED: uncharacterized protein LOC103325199 [Prunus mume])

HSP 1 Score: 75.9 bits (185), Expect = 7.6e-11
Identity = 81/202 (40.10%), Postives = 100/202 (49.50%), Query Frame = 1

Query: 2   FWFFISNALIFIIAADYAYFSLTQ--YKRSHLYEHYSPPNPKMTHFQ-RQTSSFV----- 61
           FWF ISN LI IIAADY  FS +    +  +LY+ Y      M H Q R  SSFV     
Sbjct: 62  FWFAISNTLILIIAADYGAFSSSNDNIQDQNLYQEY------MIHRQARSVSSFVSRYPE 121

Query: 62  ----------------VFDEK---REYPDGNLRNFVQERC----------DSMPLLKTTP 121
                           V D K    E  D   +  VQE+           +     +   
Sbjct: 122 IAFKKSSCPNKQSEVDVDDMKAKNEEVADTQNKEVVQEKSVVHVSKGDVQNKDCARENVA 181

Query: 122 VRTYERSKSEKPKR--SVSKESKKKMAKRLESGM-YEEKELEENEYSKMTDEELNRRVEE 164
            +TY+RSKSEK K   +V  E KK + KR E    YE   +E+NE+S M+DEELNRRVEE
Sbjct: 182 AKTYQRSKSEKTKTKGAVIDERKKDILKRSEDEKKYEPNTVEDNEFSVMSDEELNRRVEE 241

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0M033_CUCSA1.5e-4269.57Uncharacterized protein OS=Cucumis sativus GN=Csa_1G435810 PE=4 SV=1[more]
A0A067GJD6_CITSI6.2e-1242.59Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039587mg PE=4 SV=1[more]
M5WIZ9_PRUPE1.4e-1140.59Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017601mg PE=4 SV=1[more]
V4TP41_9ROSI2.6e-1036.87Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017572mg PE=4 SV=1[more]
A0A0A0LUF0_CUCSA7.6e-1039.02Uncharacterized protein OS=Cucumis sativus GN=Csa_1G435700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|659068431|ref|XP_008444371.1|2.2e-4268.55PREDICTED: uncharacterized protein LOC103487717 [Cucumis melo][more]
gi|700210440|gb|KGN65536.1|2.2e-4269.57hypothetical protein Csa_1G435810 [Cucumis sativus][more]
gi|641856685|gb|KDO75451.1|8.9e-1242.59hypothetical protein CISIN_1g039587mg [Citrus sinensis][more]
gi|595881864|ref|XP_007212500.1|2.0e-1140.59hypothetical protein PRUPE_ppa017601mg [Prunus persica][more]
gi|645238202|ref|XP_008225566.1|7.6e-1140.10PREDICTED: uncharacterized protein LOC103325199 [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008480DUF761_pln
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG20g05270.1Cp4.1LG20g05270.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 132..153
score: 4.
NoneNo IPR availablePANTHERPTHR35997FAMILY NOT NAMEDcoord: 86..160
score: 3.5

The following gene(s) are paralogous to this gene:

None