Cp4.1LG20g05270 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCTGGTTCTTCATTTCCAATGCCCTCATCTTCATCATTGCTGCTGATTATGCCTATTTCTCTCTCACCCAATACAAAAGATCCCATCTTTATGAACATTACTCACCTCCCAACCCAAAGATGACTCATTTTCAACGTCAAACTTCTTCATTTGTAGTATTTGATGAAAAGAGAGAATACCCAGATGGGAATTTGCGAAATTTTGTTCAAGAACGATGCGATTCTATGCCGCTGTTGAAGACGACTCCGGTGAGAACTTACGAGCGGAGCAAGTCGGAGAAACCCAAAAGAAGTGTGTCAAAGGAGAGCAAGAAAAAGATGGCGAAGAGATTAGAAAGTGGCATGTACGAAGAGAAGGAATTAGAAGAAAATGAGTATTCAAAGATGACAGATGAAGAACTGAACAGAAGGGTGGAAGAGTTTATTCAAAGATTTAACACACAAATGAGACTTGAAACTAAATCAGCTGAATTAAAGTCTCATAAAAAGGGCCACTAG ATGTTCTGGTTCTTCATTTCCAATGCCCTCATCTTCATCATTGCTGCTGATTATGCCTATTTCTCTCTCACCCAATACAAAAGATCCCATCTTTATGAACATTACTCACCTCCCAACCCAAAGATGACTCATTTTCAACGTCAAACTTCTTCATTTGTAGTATTTGATGAAAAGAGAGAATACCCAGATGGGAATTTGCGAAATTTTGTTCAAGAACGATGCGATTCTATGCCGCTGTTGAAGACGACTCCGGTGAGAACTTACGAGCGGAGCAAGTCGGAGAAACCCAAAAGAAGTGTGTCAAAGGAGAGCAAGAAAAAGATGGCGAAGAGATTAGAAAGTGGCATGTACGAAGAGAAGGAATTAGAAGAAAATGAGTATTCAAAGATGACAGATGAAGAACTGAACAGAAGGGTGGAAGAGTTTATTCAAAGATTTAACACACAAATGAGACTTGAAACTAAATCAGCTGAATTAAAGTCTCATAAAAAGGGCCACTAG ATGTTCTGGTTCTTCATTTCCAATGCCCTCATCTTCATCATTGCTGCTGATTATGCCTATTTCTCTCTCACCCAATACAAAAGATCCCATCTTTATGAACATTACTCACCTCCCAACCCAAAGATGACTCATTTTCAACGTCAAACTTCTTCATTTGTAGTATTTGATGAAAAGAGAGAATACCCAGATGGGAATTTGCGAAATTTTGTTCAAGAACGATGCGATTCTATGCCGCTGTTGAAGACGACTCCGGTGAGAACTTACGAGCGGAGCAAGTCGGAGAAACCCAAAAGAAGTGTGTCAAAGGAGAGCAAGAAAAAGATGGCGAAGAGATTAGAAAGTGGCATGTACGAAGAGAAGGAATTAGAAGAAAATGAGTATTCAAAGATGACAGATGAAGAACTGAACAGAAGGGTGGAAGAGTTTATTCAAAGATTTAACACACAAATGAGACTTGAAACTAAATCAGCTGAATTAAAGTCTCATAAAAAGGGCCACTAG MFWFFISNALIFIIAADYAYFSLTQYKRSHLYEHYSPPNPKMTHFQRQTSSFVVFDEKREYPDGNLRNFVQERCDSMPLLKTTPVRTYERSKSEKPKRSVSKESKKKMAKRLESGMYEEKELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAELKSHKKGH
BLAST of Cp4.1LG20g05270 vs. TrEMBL
Match: A0A0A0M033_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G435810 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.5e-42 Identity = 112/161 (69.57%), Postives = 122/161 (75.78%), Query Frame = 1
BLAST of Cp4.1LG20g05270 vs. TrEMBL
Match: A0A067GJD6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039587mg PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 6.2e-12 Identity = 69/162 (42.59%), Postives = 89/162 (54.94%), Query Frame = 1
BLAST of Cp4.1LG20g05270 vs. TrEMBL
Match: M5WIZ9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017601mg PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.4e-11 Identity = 82/202 (40.59%), Postives = 101/202 (50.00%), Query Frame = 1
BLAST of Cp4.1LG20g05270 vs. TrEMBL
Match: V4TP41_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017572mg PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.6e-10 Identity = 73/198 (36.87%), Postives = 101/198 (51.01%), Query Frame = 1
BLAST of Cp4.1LG20g05270 vs. TrEMBL
Match: A0A0A0LUF0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G435700 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 7.6e-10 Identity = 64/164 (39.02%), Postives = 88/164 (53.66%), Query Frame = 1
BLAST of Cp4.1LG20g05270 vs. NCBI nr
Match: gi|659068431|ref|XP_008444371.1| (PREDICTED: uncharacterized protein LOC103487717 [Cucumis melo]) HSP 1 Score: 180.6 bits (457), Expect = 2.2e-42 Identity = 109/159 (68.55%), Postives = 123/159 (77.36%), Query Frame = 1
BLAST of Cp4.1LG20g05270 vs. NCBI nr
Match: gi|700210440|gb|KGN65536.1| (hypothetical protein Csa_1G435810 [Cucumis sativus]) HSP 1 Score: 180.6 bits (457), Expect = 2.2e-42 Identity = 112/161 (69.57%), Postives = 122/161 (75.78%), Query Frame = 1
BLAST of Cp4.1LG20g05270 vs. NCBI nr
Match: gi|641856685|gb|KDO75451.1| (hypothetical protein CISIN_1g039587mg [Citrus sinensis]) HSP 1 Score: 79.0 bits (193), Expect = 8.9e-12 Identity = 69/162 (42.59%), Postives = 89/162 (54.94%), Query Frame = 1
BLAST of Cp4.1LG20g05270 vs. NCBI nr
Match: gi|595881864|ref|XP_007212500.1| (hypothetical protein PRUPE_ppa017601mg [Prunus persica]) HSP 1 Score: 77.8 bits (190), Expect = 2.0e-11 Identity = 82/202 (40.59%), Postives = 101/202 (50.00%), Query Frame = 1
BLAST of Cp4.1LG20g05270 vs. NCBI nr
Match: gi|645238202|ref|XP_008225566.1| (PREDICTED: uncharacterized protein LOC103325199 [Prunus mume]) HSP 1 Score: 75.9 bits (185), Expect = 7.6e-11 Identity = 81/202 (40.10%), Postives = 100/202 (49.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |