Cp4.1LG20g05200 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATGAAACCCAGAAGAAAGTTCCTCCATTTATACGCAGAGGAAGCTCTCTGTTTCTCCGCCTTCCTTCTCTCCCTCTTCATTTACTTCTCTGCTTTCAATCTCTCTCTCTCCACTCTCTTCCGCCACACCACCTTCTGGTTTTGCCTCTCCAACACTCTCATTTTCATCATCGCCGCCCATTCCCGCGCTTTCTCTCCGCCCCCCACCTTCAACTCCGCCGCCGTAATCATCCCAACCCCACCACAAAATAACTTCAATTCCGGCAACCCAACTGAAAATCATCAACAACAACAAATCCCACTTCCCACTGGTACACACACAATGATTCTCTCTTTTCTATTTTTAACATTTTTATTGTCCTTCTTCTAATTTTTTAGATATGTTTTAGGCCAAATTGAATTTGGGTTAATTATTTCAGAAATTTCGATTAATAATTCGAGAAAATCTTACGATCCAAGCAAGTCGGAGAAAGCGATGAGAAGAGTTGCTAAGGAAACGAAGATGGCGATGAGGAGATCGAAGACGATGACGAGAAATGAGAAAGAAGAGACGAAGAATGAGTTAGCGGAGATGTCAAATGAAGAACTGAACAAAAGAGTTGAAGAGTTTATTGAACGATTCAATAGACAAATGAGACTTCAAGCGATTGGAGATAGCAATGAGGAGTAG ATGGCCATGAAACCCAGAAGAAAGTTCCTCCATTTATACGCAGAGGAAGCTCTCTGTTTCTCCGCCTTCCTTCTCTCCCTCTTCATTTACTTCTCTGCTTTCAATCTCTCTCTCTCCACTCTCTTCCGCCACACCACCTTCTGGTTTTGCCTCTCCAACACTCTCATTTTCATCATCGCCGCCCATTCCCGCGCTTTCTCTCCGCCCCCCACCTTCAACTCCGCCGCCGTAATCATCCCAACCCCACCACAAAATAACTTCAATTCCGGCAACCCAACTGAAAATCATCAACAACAACAAATCCCACTTCCCACTGAAATTTCGATTAATAATTCGAGAAAATCTTACGATCCAAGCAAGTCGGAGAAAGCGATGAGAAGAGTTGCTAAGGAAACGAAGATGGCGATGAGGAGATCGAAGACGATGACGAGAAATGAGAAAGAAGAGACGAAGAATGAGTTAGCGGAGATGTCAAATGAAGAACTGAACAAAAGAGTTGAAGAGTTTATTGAACGATTCAATAGACAAATGAGACTTCAAGCGATTGGAGATAGCAATGAGGAGTAG ATGGCCATGAAACCCAGAAGAAAGTTCCTCCATTTATACGCAGAGGAAGCTCTCTGTTTCTCCGCCTTCCTTCTCTCCCTCTTCATTTACTTCTCTGCTTTCAATCTCTCTCTCTCCACTCTCTTCCGCCACACCACCTTCTGGTTTTGCCTCTCCAACACTCTCATTTTCATCATCGCCGCCCATTCCCGCGCTTTCTCTCCGCCCCCCACCTTCAACTCCGCCGCCGTAATCATCCCAACCCCACCACAAAATAACTTCAATTCCGGCAACCCAACTGAAAATCATCAACAACAACAAATCCCACTTCCCACTGAAATTTCGATTAATAATTCGAGAAAATCTTACGATCCAAGCAAGTCGGAGAAAGCGATGAGAAGAGTTGCTAAGGAAACGAAGATGGCGATGAGGAGATCGAAGACGATGACGAGAAATGAGAAAGAAGAGACGAAGAATGAGTTAGCGGAGATGTCAAATGAAGAACTGAACAAAAGAGTTGAAGAGTTTATTGAACGATTCAATAGACAAATGAGACTTCAAGCGATTGGAGATAGCAATGAGGAGTAG MAMKPRRKFLHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRHTTFWFCLSNTLIFIIAAHSRAFSPPPTFNSAAVIIPTPPQNNFNSGNPTENHQQQQIPLPTEISINNSRKSYDPSKSEKAMRRVAKETKMAMRRSKTMTRNEKEETKNELAEMSNEELNKRVEEFIERFNRQMRLQAIGDSNEE
BLAST of Cp4.1LG20g05200 vs. TrEMBL
Match: A0A0A0LUF0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G435700 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.2e-27 Identity = 103/210 (49.05%), Postives = 131/210 (62.38%), Query Frame = 1
BLAST of Cp4.1LG20g05200 vs. TrEMBL
Match: A0A067GJD6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039587mg PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 7.1e-12 Identity = 76/203 (37.44%), Postives = 101/203 (49.75%), Query Frame = 1
BLAST of Cp4.1LG20g05200 vs. TrEMBL
Match: A0A0A0M033_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G435810 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 3.4e-06 Identity = 61/161 (37.89%), Postives = 82/161 (50.93%), Query Frame = 1
BLAST of Cp4.1LG20g05200 vs. TrEMBL
Match: A0A151RWB2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_031537 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 9.9e-06 Identity = 70/196 (35.71%), Postives = 99/196 (50.51%), Query Frame = 1
BLAST of Cp4.1LG20g05200 vs. NCBI nr
Match: gi|659068443|ref|XP_008444445.1| (PREDICTED: 101 kDa malaria antigen-like [Cucumis melo]) HSP 1 Score: 134.0 bits (336), Expect = 2.7e-28 Identity = 105/219 (47.95%), Postives = 130/219 (59.36%), Query Frame = 1
BLAST of Cp4.1LG20g05200 vs. NCBI nr
Match: gi|700210429|gb|KGN65525.1| (hypothetical protein Csa_1G435700 [Cucumis sativus]) HSP 1 Score: 131.3 bits (329), Expect = 1.7e-27 Identity = 103/210 (49.05%), Postives = 131/210 (62.38%), Query Frame = 1
BLAST of Cp4.1LG20g05200 vs. NCBI nr
Match: gi|778660928|ref|XP_011657186.1| (PREDICTED: uncharacterized protein LOC105435817 [Cucumis sativus]) HSP 1 Score: 131.3 bits (329), Expect = 1.7e-27 Identity = 103/210 (49.05%), Postives = 131/210 (62.38%), Query Frame = 1
BLAST of Cp4.1LG20g05200 vs. NCBI nr
Match: gi|641856685|gb|KDO75451.1| (hypothetical protein CISIN_1g039587mg [Citrus sinensis]) HSP 1 Score: 79.0 bits (193), Expect = 1.0e-11 Identity = 76/203 (37.44%), Postives = 101/203 (49.75%), Query Frame = 1
BLAST of Cp4.1LG20g05200 vs. NCBI nr
Match: gi|694363171|ref|XP_009360909.1| (PREDICTED: uncharacterized protein LOC103951295 [Pyrus x bretschneideri]) HSP 1 Score: 77.8 bits (190), Expect = 2.3e-11 Identity = 82/214 (38.32%), Postives = 103/214 (48.13%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |