Cp4.1LG20g05200 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG20g05200
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG20 : 3081527 .. 3082201 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATGAAACCCAGAAGAAAGTTCCTCCATTTATACGCAGAGGAAGCTCTCTGTTTCTCCGCCTTCCTTCTCTCCCTCTTCATTTACTTCTCTGCTTTCAATCTCTCTCTCTCCACTCTCTTCCGCCACACCACCTTCTGGTTTTGCCTCTCCAACACTCTCATTTTCATCATCGCCGCCCATTCCCGCGCTTTCTCTCCGCCCCCCACCTTCAACTCCGCCGCCGTAATCATCCCAACCCCACCACAAAATAACTTCAATTCCGGCAACCCAACTGAAAATCATCAACAACAACAAATCCCACTTCCCACTGGTACACACACAATGATTCTCTCTTTTCTATTTTTAACATTTTTATTGTCCTTCTTCTAATTTTTTAGATATGTTTTAGGCCAAATTGAATTTGGGTTAATTATTTCAGAAATTTCGATTAATAATTCGAGAAAATCTTACGATCCAAGCAAGTCGGAGAAAGCGATGAGAAGAGTTGCTAAGGAAACGAAGATGGCGATGAGGAGATCGAAGACGATGACGAGAAATGAGAAAGAAGAGACGAAGAATGAGTTAGCGGAGATGTCAAATGAAGAACTGAACAAAAGAGTTGAAGAGTTTATTGAACGATTCAATAGACAAATGAGACTTCAAGCGATTGGAGATAGCAATGAGGAGTAG

mRNA sequence

ATGGCCATGAAACCCAGAAGAAAGTTCCTCCATTTATACGCAGAGGAAGCTCTCTGTTTCTCCGCCTTCCTTCTCTCCCTCTTCATTTACTTCTCTGCTTTCAATCTCTCTCTCTCCACTCTCTTCCGCCACACCACCTTCTGGTTTTGCCTCTCCAACACTCTCATTTTCATCATCGCCGCCCATTCCCGCGCTTTCTCTCCGCCCCCCACCTTCAACTCCGCCGCCGTAATCATCCCAACCCCACCACAAAATAACTTCAATTCCGGCAACCCAACTGAAAATCATCAACAACAACAAATCCCACTTCCCACTGAAATTTCGATTAATAATTCGAGAAAATCTTACGATCCAAGCAAGTCGGAGAAAGCGATGAGAAGAGTTGCTAAGGAAACGAAGATGGCGATGAGGAGATCGAAGACGATGACGAGAAATGAGAAAGAAGAGACGAAGAATGAGTTAGCGGAGATGTCAAATGAAGAACTGAACAAAAGAGTTGAAGAGTTTATTGAACGATTCAATAGACAAATGAGACTTCAAGCGATTGGAGATAGCAATGAGGAGTAG

Coding sequence (CDS)

ATGGCCATGAAACCCAGAAGAAAGTTCCTCCATTTATACGCAGAGGAAGCTCTCTGTTTCTCCGCCTTCCTTCTCTCCCTCTTCATTTACTTCTCTGCTTTCAATCTCTCTCTCTCCACTCTCTTCCGCCACACCACCTTCTGGTTTTGCCTCTCCAACACTCTCATTTTCATCATCGCCGCCCATTCCCGCGCTTTCTCTCCGCCCCCCACCTTCAACTCCGCCGCCGTAATCATCCCAACCCCACCACAAAATAACTTCAATTCCGGCAACCCAACTGAAAATCATCAACAACAACAAATCCCACTTCCCACTGAAATTTCGATTAATAATTCGAGAAAATCTTACGATCCAAGCAAGTCGGAGAAAGCGATGAGAAGAGTTGCTAAGGAAACGAAGATGGCGATGAGGAGATCGAAGACGATGACGAGAAATGAGAAAGAAGAGACGAAGAATGAGTTAGCGGAGATGTCAAATGAAGAACTGAACAAAAGAGTTGAAGAGTTTATTGAACGATTCAATAGACAAATGAGACTTCAAGCGATTGGAGATAGCAATGAGGAGTAG

Protein sequence

MAMKPRRKFLHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRHTTFWFCLSNTLIFIIAAHSRAFSPPPTFNSAAVIIPTPPQNNFNSGNPTENHQQQQIPLPTEISINNSRKSYDPSKSEKAMRRVAKETKMAMRRSKTMTRNEKEETKNELAEMSNEELNKRVEEFIERFNRQMRLQAIGDSNEE
BLAST of Cp4.1LG20g05200 vs. TrEMBL
Match: A0A0A0LUF0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G435700 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-27
Identity = 103/210 (49.05%), Postives = 131/210 (62.38%), Query Frame = 1

Query: 1   MAMKPRRKFLHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRHTTFWFCLSNTLIFIIA 60
           M +K  +KFL+L+A+ AL    FL+S F  +  F+LS S LF HT FWF LSNTLIF+IA
Sbjct: 13  MNIKLPKKFLYLFAKGAL----FLISFFFIY--FSLS-SDLFNHTNFWFFLSNTLIFVIA 72

Query: 61  AHSRAFSPPPTFNSAAVIIPTPPQNNF----------NSGNPTENHQQQQ-IPLPTEIS- 120
             S AFS P +F  AA   P+ PQ+NF          NS  P +N +++  IPL TEIS 
Sbjct: 73  LDSGAFSSPSSFVPAAKPNPSSPQHNFNNTIVVNQLPNSPIPAQNEEEETIIPLTTEISF 132

Query: 121 ---INNSRKSYDPSKSEKAMRR-VAKETKMAMRRSKTMTR------NEKEETKNELAEMS 180
               NN  K Y  SKSEK ++R V K  K+ MRRSKTM +       EKEE  +E  +M+
Sbjct: 133 PCKFNNPIKPYQRSKSEKDIKRMVEKAKKVRMRRSKTMIKQNGTSTKEKEEENDEFTKMT 192

Query: 181 NEELNKRVEEFIERFNRQMRLQAIGDSNEE 189
           +EELN+RVEEFIERFNRQ+RLQ + +   E
Sbjct: 193 DEELNRRVEEFIERFNRQIRLQEMNEDENE 215

BLAST of Cp4.1LG20g05200 vs. TrEMBL
Match: A0A067GJD6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039587mg PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.1e-12
Identity = 76/203 (37.44%), Postives = 101/203 (49.75%), Query Frame = 1

Query: 3   MKPRRKFLHLYAEEALCFSAFLLSLFIYFSAF---NLSLSTLFRHTTFWFCLSNTLIFII 62
           +K R     LY+     F  FL S+F+Y S F   NLS ST   +  FWF +SNTLI II
Sbjct: 19  LKSRENPQRLYS-----FVVFLCSIFVYISIFYIFNLSPSTFLYNNKFWFFISNTLILII 78

Query: 63  AAHSRAFSPPP----------TFNSAAVIIPTPPQNNFNSGNPTENHQQQQIPLPTEISI 122
           AA   AFS               +S A I+      +   GNP E+ Q++    P E   
Sbjct: 79  AADYGAFSSSEGNKNDVYEEYVMHSQARIV-----TDKTFGNPNESFQEK----PVEART 138

Query: 123 NNSRKSYDPSKSEKAMRRVAKETKMAMRRSKTMTRNEKE-----ETKNELAEMSNEELNK 182
               KS + +K    +      T   +RRS+T  R E       + +NE + MSNEELN+
Sbjct: 139 YRRTKSDNKTKRSVLIDESKNSTNYILRRSETEVREEPAAADSCQEENEFSSMSNEELNR 198

Query: 183 RVEEFIERFNRQMRLQAIGDSNE 188
           RVEEFI++FNRQ+RLQ  G  +E
Sbjct: 199 RVEEFIQKFNRQIRLQRAGKFHE 207

BLAST of Cp4.1LG20g05200 vs. TrEMBL
Match: A0A0A0M033_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G435810 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.4e-06
Identity = 61/161 (37.89%), Postives = 82/161 (50.93%), Query Frame = 1

Query: 45  TTFWFCLSNTLIFIIAAHSRAFS---------------PPPTFNSAAVIIPTPPQNNFNS 104
           T FWF +SNTLIFIIA     FS                PP        + T     F+ 
Sbjct: 41  TVFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDYYYSPPNPKLTHFQLQTSSLVVFDE 100

Query: 105 GNPTENH------QQQQIPLPTEISINNSRKSYDPSKSEKAMRRVAKETK---MAMRRSK 164
              T +       Q Q++  P++ +    R +Y   KSEK  R V+ E     M  RRS+
Sbjct: 101 KRETPDEKLETVVQSQRLDSPSKNTTTPVR-TYLRRKSEKPKRIVSMEISKKMMGKRRSE 160

Query: 165 TMTRNEKE-ETKNELAEMSNEELNKRVEEFIERFNRQMRLQ 181
           ++    KE E +NE A+M++EELN+RVEEFI+RFN+QMRLQ
Sbjct: 161 SVKNEGKELEDENEFAKMTDEELNRRVEEFIQRFNKQMRLQ 200

BLAST of Cp4.1LG20g05200 vs. TrEMBL
Match: A0A151RWB2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_031537 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.9e-06
Identity = 70/196 (35.71%), Postives = 99/196 (50.51%), Query Frame = 1

Query: 4   KPRRKFLHLYAEEALCFSAFLLSLFIY---FSAFNLSLSTLFRHTTFWFCLSNTLIFIIA 63
           KP+         ++L F A + SLFIY   F  FNLS  +L  +  FWF +SNTLI IIA
Sbjct: 13  KPKEYVSTYPKAKSLSFLASIFSLFIYICIFYTFNLSPYSLLNNNIFWFFMSNTLILIIA 72

Query: 64  AHSRAFSPPPTFNSA-AVIIPTPPQNNFNSGNPTENHQQQQIPLPT--EISINNSRKS-- 123
               AFS            +      N+ S    +  +Q  IP     + S N   K+  
Sbjct: 73  VDYGAFSSSKQKQDLYEEYVQHSQARNYVSSYDAKVDKQCIIPKQKLGDGSENFVEKAIP 132

Query: 124 ---YDPSKSEKAMR--RVAKETKM-AMRRSKTM-TRNEKEETKNELAEMSNEELNKRVEE 183
              +  SKS++  R   V  E ++  +++S+TM      EE  NE + MSNE+LN+R+EE
Sbjct: 133 ARIFRRSKSDRHNRAKHVVHEARVNKVKKSETMKVEASVEEENNEFSIMSNEDLNRRIEE 192

Query: 184 FIERFNRQMRLQAIGD 185
           FI++FNRQ+R QA  D
Sbjct: 193 FIQKFNRQIRSQATRD 208

BLAST of Cp4.1LG20g05200 vs. NCBI nr
Match: gi|659068443|ref|XP_008444445.1| (PREDICTED: 101 kDa malaria antigen-like [Cucumis melo])

HSP 1 Score: 134.0 bits (336), Expect = 2.7e-28
Identity = 105/219 (47.95%), Postives = 130/219 (59.36%), Query Frame = 1

Query: 1   MAMKPRRKFLHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRHTTFWFCLSNTLIFIIA 60
           M +K  +KFLHL+A+ AL    F    F +F  F+LS S  F HT FWF LSNTLIFIIA
Sbjct: 12  MNIKLPKKFLHLFAKAALFLIFFFF--FFFFVYFSLS-SDFFNHTNFWFFLSNTLIFIIA 71

Query: 61  AHSRAFSPPPTFNSAAVIIPTPPQNNF----------NSGNPTENHQQQQ-------IPL 120
             S AFS P +F  AA   PT PQ+NF          NS  P +  ++++       IPL
Sbjct: 72  LDSGAFSSPSSFIPAAKPNPTSPQHNFNNTIVVNELPNSPIPAQKEEEEEEEEEEITIPL 131

Query: 121 PTEISI----NNSRKSYDPSKSEKAMRRVA-KETKMAMRRSKTMTR-------------N 180
            TEISI    NN  K Y  SKSEK ++R+A K  K+ M+RSKTM R              
Sbjct: 132 TTEISIPPKFNNPIKPYQRSKSEKDIKRMAGKAKKITMKRSKTMIRQDATSTKEKEEEEE 191

Query: 181 EKEETKNELAEMSNEELNKRVEEFIERFNRQMRLQAIGD 185
           E+EE KNE  +M++EELN+RVEEFIERFNRQ+RLQ I +
Sbjct: 192 EEEEEKNEFTKMTDEELNRRVEEFIERFNRQIRLQQINE 227

BLAST of Cp4.1LG20g05200 vs. NCBI nr
Match: gi|700210429|gb|KGN65525.1| (hypothetical protein Csa_1G435700 [Cucumis sativus])

HSP 1 Score: 131.3 bits (329), Expect = 1.7e-27
Identity = 103/210 (49.05%), Postives = 131/210 (62.38%), Query Frame = 1

Query: 1   MAMKPRRKFLHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRHTTFWFCLSNTLIFIIA 60
           M +K  +KFL+L+A+ AL    FL+S F  +  F+LS S LF HT FWF LSNTLIF+IA
Sbjct: 13  MNIKLPKKFLYLFAKGAL----FLISFFFIY--FSLS-SDLFNHTNFWFFLSNTLIFVIA 72

Query: 61  AHSRAFSPPPTFNSAAVIIPTPPQNNF----------NSGNPTENHQQQQ-IPLPTEIS- 120
             S AFS P +F  AA   P+ PQ+NF          NS  P +N +++  IPL TEIS 
Sbjct: 73  LDSGAFSSPSSFVPAAKPNPSSPQHNFNNTIVVNQLPNSPIPAQNEEEETIIPLTTEISF 132

Query: 121 ---INNSRKSYDPSKSEKAMRR-VAKETKMAMRRSKTMTR------NEKEETKNELAEMS 180
               NN  K Y  SKSEK ++R V K  K+ MRRSKTM +       EKEE  +E  +M+
Sbjct: 133 PCKFNNPIKPYQRSKSEKDIKRMVEKAKKVRMRRSKTMIKQNGTSTKEKEEENDEFTKMT 192

Query: 181 NEELNKRVEEFIERFNRQMRLQAIGDSNEE 189
           +EELN+RVEEFIERFNRQ+RLQ + +   E
Sbjct: 193 DEELNRRVEEFIERFNRQIRLQEMNEDENE 215

BLAST of Cp4.1LG20g05200 vs. NCBI nr
Match: gi|778660928|ref|XP_011657186.1| (PREDICTED: uncharacterized protein LOC105435817 [Cucumis sativus])

HSP 1 Score: 131.3 bits (329), Expect = 1.7e-27
Identity = 103/210 (49.05%), Postives = 131/210 (62.38%), Query Frame = 1

Query: 1   MAMKPRRKFLHLYAEEALCFSAFLLSLFIYFSAFNLSLSTLFRHTTFWFCLSNTLIFIIA 60
           M +K  +KFL+L+A+ AL    FL+S F  +  F+LS S LF HT FWF LSNTLIF+IA
Sbjct: 1   MNIKLPKKFLYLFAKGAL----FLISFFFIY--FSLS-SDLFNHTNFWFFLSNTLIFVIA 60

Query: 61  AHSRAFSPPPTFNSAAVIIPTPPQNNF----------NSGNPTENHQQQQ-IPLPTEIS- 120
             S AFS P +F  AA   P+ PQ+NF          NS  P +N +++  IPL TEIS 
Sbjct: 61  LDSGAFSSPSSFVPAAKPNPSSPQHNFNNTIVVNQLPNSPIPAQNEEEETIIPLTTEISF 120

Query: 121 ---INNSRKSYDPSKSEKAMRR-VAKETKMAMRRSKTMTR------NEKEETKNELAEMS 180
               NN  K Y  SKSEK ++R V K  K+ MRRSKTM +       EKEE  +E  +M+
Sbjct: 121 PCKFNNPIKPYQRSKSEKDIKRMVEKAKKVRMRRSKTMIKQNGTSTKEKEEENDEFTKMT 180

Query: 181 NEELNKRVEEFIERFNRQMRLQAIGDSNEE 189
           +EELN+RVEEFIERFNRQ+RLQ + +   E
Sbjct: 181 DEELNRRVEEFIERFNRQIRLQEMNEDENE 203

BLAST of Cp4.1LG20g05200 vs. NCBI nr
Match: gi|641856685|gb|KDO75451.1| (hypothetical protein CISIN_1g039587mg [Citrus sinensis])

HSP 1 Score: 79.0 bits (193), Expect = 1.0e-11
Identity = 76/203 (37.44%), Postives = 101/203 (49.75%), Query Frame = 1

Query: 3   MKPRRKFLHLYAEEALCFSAFLLSLFIYFSAF---NLSLSTLFRHTTFWFCLSNTLIFII 62
           +K R     LY+     F  FL S+F+Y S F   NLS ST   +  FWF +SNTLI II
Sbjct: 19  LKSRENPQRLYS-----FVVFLCSIFVYISIFYIFNLSPSTFLYNNKFWFFISNTLILII 78

Query: 63  AAHSRAFSPPP----------TFNSAAVIIPTPPQNNFNSGNPTENHQQQQIPLPTEISI 122
           AA   AFS               +S A I+      +   GNP E+ Q++    P E   
Sbjct: 79  AADYGAFSSSEGNKNDVYEEYVMHSQARIV-----TDKTFGNPNESFQEK----PVEART 138

Query: 123 NNSRKSYDPSKSEKAMRRVAKETKMAMRRSKTMTRNEKE-----ETKNELAEMSNEELNK 182
               KS + +K    +      T   +RRS+T  R E       + +NE + MSNEELN+
Sbjct: 139 YRRTKSDNKTKRSVLIDESKNSTNYILRRSETEVREEPAAADSCQEENEFSSMSNEELNR 198

Query: 183 RVEEFIERFNRQMRLQAIGDSNE 188
           RVEEFI++FNRQ+RLQ  G  +E
Sbjct: 199 RVEEFIQKFNRQIRLQRAGKFHE 207

BLAST of Cp4.1LG20g05200 vs. NCBI nr
Match: gi|694363171|ref|XP_009360909.1| (PREDICTED: uncharacterized protein LOC103951295 [Pyrus x bretschneideri])

HSP 1 Score: 77.8 bits (190), Expect = 2.3e-11
Identity = 82/214 (38.32%), Postives = 103/214 (48.13%), Query Frame = 1

Query: 22  AFLLSLFIY---FSAFNLSLSTLFRHTTFWFCLSNTLIFIIAAHSRAFSPP--------- 81
           AF  S+ IY   F  FN+SLST+F ++ FWF +SNTLI IIA    AFS           
Sbjct: 33  AFFFSILIYICIFYIFNISLSTVFNNSKFWFAISNTLILIIAIDCGAFSSACKDQQDHFY 92

Query: 82  -------PTFNSAAVIIPTPPQ-------NNFNSGN--PTENHQQQQIPLPTEI------ 141
                      SA+  +   PQ       N   +GN   T+N +   +P  TEI      
Sbjct: 93  QEYMMHSQAARSASSFVSQYPQIVNECSPNQLEAGNNRKTKNEEVLLVPQNTEIVQEKRV 152

Query: 142 ------------SINNSR-----KSYDPSKSEKAMRRVA-KETKMAMRRSKTMTRNEKE- 182
                       S +  R     K+Y  SKSEKA R V   E K   RRS+T  +  K  
Sbjct: 153 VHVSKGDNDQNKSCSTGRENVREKTYQRSKSEKAKRGVIINERKNTPRRSETTYQKHKPT 212

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LUF0_CUCSA1.2e-2749.05Uncharacterized protein OS=Cucumis sativus GN=Csa_1G435700 PE=4 SV=1[more]
A0A067GJD6_CITSI7.1e-1237.44Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039587mg PE=4 SV=1[more]
A0A0A0M033_CUCSA3.4e-0637.89Uncharacterized protein OS=Cucumis sativus GN=Csa_1G435810 PE=4 SV=1[more]
A0A151RWB2_CAJCA9.9e-0635.71Uncharacterized protein OS=Cajanus cajan GN=KK1_031537 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|659068443|ref|XP_008444445.1|2.7e-2847.95PREDICTED: 101 kDa malaria antigen-like [Cucumis melo][more]
gi|700210429|gb|KGN65525.1|1.7e-2749.05hypothetical protein Csa_1G435700 [Cucumis sativus][more]
gi|778660928|ref|XP_011657186.1|1.7e-2749.05PREDICTED: uncharacterized protein LOC105435817 [Cucumis sativus][more]
gi|641856685|gb|KDO75451.1|1.0e-1137.44hypothetical protein CISIN_1g039587mg [Citrus sinensis][more]
gi|694363171|ref|XP_009360909.1|2.3e-1138.32PREDICTED: uncharacterized protein LOC103951295 [Pyrus x bretschneideri][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008480DUF761_pln
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG20g05200.1Cp4.1LG20g05200.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 160..180
score: 6.
NoneNo IPR availableunknownCoilCoilcoord: 140..179
scor
NoneNo IPR availablePANTHERPTHR35997FAMILY NOT NAMEDcoord: 109..187
score: 6.6
NoneNo IPR availablePANTHERPTHR35997:SF2SUBFAMILY NOT NAMEDcoord: 109..187
score: 6.6

The following gene(s) are paralogous to this gene:

None