Cp4.1LG20g03950 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG20g03950
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	BEST Arabidopsis thaliana protein match is: glycine-rich protein .
Location	Cp4.1LG20 : 2240151 .. 2241149 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTTCTACGATTCCTACTACGATTCTGCTCAAATTGAGCCTCCAATTCCGCAATCCAGCTACGAACCCACTTTCTACAATCTCTTTGACTACCCACCTCCTTGTTATTTCGGTCAGGCTTATGCTCCCTACACATCCAATTTCAATGAATTCCCCCAATTGATCGAGTATCAACCCGTTGACCATGGGGCTTATGGCTATACAATTAGCTACTCGGCCAATGCTTGTTCTGCATCGACTTTCAGTGTCCCAAAAGTGATCGAATACGACCCTGATTTGTATAGCGATGGTTACCAAAAGGTGTCGTCCCAATTTGTGATCTCCTACTCTGTTTCAGAATTCAACGAGACAGAATTTGAAGAGTACGATCCAACCCCTTACGGTGGTGGCTACGACATTCATGAAACCTACGGTAAGCCCCTTCAACCTTCAACTGACATTTGCTACTCACCCTCCTCTTCTTCACCTCCAAAACCCCCACCCACCGCAATTCAGGAGGCACCAAAGGAAAAAATTGAAGAAAAAACAAAGCCGTCGAGCGAAATCAAGCCGACCCAGATCGAGAAAGATAACACGGCATCTGAATCTGAAGAAATTGAGGAAGTTCAAGCGATTCCCTTTGCAGATCCGGGAATAGGGTATGGAAATGGAAGGGAAGTGAACCAATTTCCAAGTGGGTATGGACTGGAAGCGATGGATCTTTGTGAAAGTTTATTTGGGTATTGGCCATGTCTCTCACGGATTAAAAAGCAAACAGGTTGTAGACAACCCAACAACGGCTGTGGGCGTTGCCATGGGCATTGCTATTGCTATGGCAATTACGGCAACCAGTGGCAGACGGCGGCGGACTATCTATTCGGAAGCCATAACCCATATCCAGATGGAAGGAGTGAAGGAGACGGTGTTTATGGGTATCAAACACAGTATCAAACGGAGCCTGTCTATGGCTACGTTTGGTTGAATCAAGACGACTTCGTTCGGTCCGATGACGCTTGA

mRNA sequence

ATGGCCTTCTACGATTCCTACTACGATTCTGCTCAAATTGAGCCTCCAATTCCGCAATCCAGCTACGAACCCACTTTCTACAATCTCTTTGACTACCCACCTCCTTGTTATTTCGGTCAGGCTTATGCTCCCTACACATCCAATTTCAATGAATTCCCCCAATTGATCGAGTATCAACCCGTTGACCATGGGGCTTATGGCTATACAATTAGCTACTCGGCCAATGCTTGTTCTGCATCGACTTTCAGTGTCCCAAAAGTGATCGAATACGACCCTGATTTGTATAGCGATGGTTACCAAAAGGTGTCGTCCCAATTTGTGATCTCCTACTCTGTTTCAGAATTCAACGAGACAGAATTTGAAGAGTACGATCCAACCCCTTACGGTGGTGGCTACGACATTCATGAAACCTACGGTAAGCCCCTTCAACCTTCAACTGACATTTGCTACTCACCCTCCTCTTCTTCACCTCCAAAACCCCCACCCACCGCAATTCAGGAGGCACCAAAGGAAAAAATTGAAGAAAAAACAAAGCCGTCGAGCGAAATCAAGCCGACCCAGATCGAGAAAGATAACACGGCATCTGAATCTGAAGAAATTGAGGAAGTTCAAGCGATTCCCTTTGCAGATCCGGGAATAGGGTATGGAAATGGAAGGGAAGTGAACCAATTTCCAAGTGGGTATGGACTGGAAGCGATGGATCTTTGTGAAAGTTTATTTGGGTATTGGCCATGTCTCTCACGGATTAAAAAGCAAACAGGTTGTAGACAACCCAACAACGGCTGTGGGCGTTGCCATGGGCATTGCTATTGCTATGGCAATTACGGCAACCAGTGGCAGACGGCGGCGGACTATCTATTCGGAAGCCATAACCCATATCCAGATGGAAGGAGTGAAGGAGACGGTGTTTATGGGTATCAAACACAGTATCAAACGGAGCCTGTCTATGGCTACGTTTGGTTGAATCAAGACGACTTCGTTCGGTCCGATGACGCTTGA

Coding sequence (CDS)

ATGGCCTTCTACGATTCCTACTACGATTCTGCTCAAATTGAGCCTCCAATTCCGCAATCCAGCTACGAACCCACTTTCTACAATCTCTTTGACTACCCACCTCCTTGTTATTTCGGTCAGGCTTATGCTCCCTACACATCCAATTTCAATGAATTCCCCCAATTGATCGAGTATCAACCCGTTGACCATGGGGCTTATGGCTATACAATTAGCTACTCGGCCAATGCTTGTTCTGCATCGACTTTCAGTGTCCCAAAAGTGATCGAATACGACCCTGATTTGTATAGCGATGGTTACCAAAAGGTGTCGTCCCAATTTGTGATCTCCTACTCTGTTTCAGAATTCAACGAGACAGAATTTGAAGAGTACGATCCAACCCCTTACGGTGGTGGCTACGACATTCATGAAACCTACGGTAAGCCCCTTCAACCTTCAACTGACATTTGCTACTCACCCTCCTCTTCTTCACCTCCAAAACCCCCACCCACCGCAATTCAGGAGGCACCAAAGGAAAAAATTGAAGAAAAAACAAAGCCGTCGAGCGAAATCAAGCCGACCCAGATCGAGAAAGATAACACGGCATCTGAATCTGAAGAAATTGAGGAAGTTCAAGCGATTCCCTTTGCAGATCCGGGAATAGGGTATGGAAATGGAAGGGAAGTGAACCAATTTCCAAGTGGGTATGGACTGGAAGCGATGGATCTTTGTGAAAGTTTATTTGGGTATTGGCCATGTCTCTCACGGATTAAAAAGCAAACAGGTTGTAGACAACCCAACAACGGCTGTGGGCGTTGCCATGGGCATTGCTATTGCTATGGCAATTACGGCAACCAGTGGCAGACGGCGGCGGACTATCTATTCGGAAGCCATAACCCATATCCAGATGGAAGGAGTGAAGGAGACGGTGTTTATGGGTATCAAACACAGTATCAAACGGAGCCTGTCTATGGCTACGTTTGGTTGAATCAAGACGACTTCGTTCGGTCCGATGACGCTTGA

Protein sequence

MAFYDSYYDSAQIEPPIPQSSYEPTFYNLFDYPPPCYFGQAYAPYTSNFNEFPQLIEYQPVDHGAYGYTISYSANACSASTFSVPKVIEYDPDLYSDGYQKVSSQFVISYSVSEFNETEFEEYDPTPYGGGYDIHETYGKPLQPSTDICYSPSSSSPPKPPPTAIQEAPKEKIEEKTKPSSEIKPTQIEKDNTASESEEIEEVQAIPFADPGIGYGNGREVNQFPSGYGLEAMDLCESLFGYWPCLSRIKKQTGCRQPNNGCGRCHGHCYCYGNYGNQWQTAADYLFGSHNPYPDGRSEGDGVYGYQTQYQTEPVYGYVWLNQDDFVRSDDA

Homology

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BLAST of Cp4.1LG20g03950 vs. TrEMBL
Match: A0A0A0LUY1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G070580 PE=4 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 2.5e-145
Identity = 268/372 (72.04%), Postives = 290/372 (77.96%), Query Frame = 1


Query: 1   MAFY-------DSYYDSAQIEPPIPQSSYEPTFYNLFDYPPPCYFGQAY----------A 60
           MAFY       DSYY+ AQIEPPIPQSS EP FYNLFDYPPPCYFGQAY          A
Sbjct: 1   MAFYNSYDFYDDSYYNYAQIEPPIPQSSNEPNFYNLFDYPPPCYFGQAYDYEVGYSANDA 60

Query: 61  PYTSNFNEFPQLIEYQPVDHGAYGYTISYSANACSASTFSVPKVIEYDPDLYSDGYQKVS 120
           PY SNFNE PQLI+++PVDHG YGY I YSANACSAS+F++PK+ EY+PDLYS+    VS
Sbjct: 61  PYRSNFNELPQLIDHEPVDHGDYGYAIRYSANACSASSFTLPKLCEYNPDLYSE----VS 120

Query: 121 SQFVISYSVSEFNETEFEEYDPTPYGGGYDIHETYGKPLQPSTDICYSPSSSSP-----P 180
           +QFVISYSVS+FNETEFEEYDPTPY GGYDI ETYGKPLQPS +ICY PSSSSP     P
Sbjct: 121 TQFVISYSVSQFNETEFEEYDPTPYDGGYDISETYGKPLQPSIEICYPPSSSSPSKSPPP 180

Query: 181 KPPPTA-----------IQEAPKEKIEEKTKPSSEIKPTQIEKDN--------TASESEE 240
            PPPTA           I EAPK KIEE+TKPSSEIKPTQIEK N        T SES E
Sbjct: 181 PPPPTATAIPIITTIPKIDEAPKGKIEEQTKPSSEIKPTQIEKTNNSSSSDSDTTSESGE 240

Query: 241 IEEVQAIPFADPGIGYGNGREVNQFPSGYGLEAMDLCESLFGYWPCLSRIKKQTGCRQPN 300
           IEE +AI   DPGIGYGN REVN+FPSG GLEAMDLCESLFGYWPCLSR K+QT  RQP 
Sbjct: 241 IEEDKAIQLGDPGIGYGNAREVNEFPSGCGLEAMDLCESLFGYWPCLSRAKRQTAYRQPK 300

Query: 301 NGCGRCHGHCYCYGNYGNQWQTAADYLFGSHNPYPDGRSEGDGVYGYQTQYQTEPVYGYV 332
           NGCGRCHGHCYCYGNYGN+WQTAA+YLFGSHNPY DGR EGD VYGYQ Q+Q EPVYGYV
Sbjct: 301 NGCGRCHGHCYCYGNYGNEWQTAAEYLFGSHNPYLDGRREGDVVYGYQRQFQEEPVYGYV 360

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BLAST of Cp4.1LG20g03950 vs. TrEMBL
Match: B9HYT2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s03530g PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.0e-45
Identity = 142/359 (39.55%), Postives = 174/359 (48.47%), Query Frame = 1


Query: 1   MAFYD-SYYDSAQIEPPIPQSSYEPTFYNLFDYPPPCYFGQAYAPYTSNFNEFPQLIEYQ 60
           MA+Y  SY D  Q E    + S  P  YN    P P +   AY+ Y  N+NE   L    
Sbjct: 1   MAYYSYSYEDDYQGEYYTGEYSITP--YNSSYDPSPDHDSVAYSSY--NYNEHQVLAYDP 60

Query: 61  PVDHGAYGYTISYSANACSASTFSVPKVIEYDPDLYSDGYQKVSSQFVISYSVSEFNETE 120
           P  + AY    SYS  A SASTFS P  IEYDP      Y    ++F++SY+VSEFNE  
Sbjct: 61  PSYYAAYDPVSSYSRTAYSASTFSEPVCIEYDPG----HYYNEQTRFIVSYNVSEFNEPA 120

Query: 121 FEEYDPTPYGGGYDIHETYGKPLQPSTDICYSPSSSSPPKPP------PTAIQEAPKEKI 180
           +EEYDPTPY GGYD+  TYGKPL  S + CY  S+  P           + I    K+++
Sbjct: 121 YEEYDPTPYDGGYDLAATYGKPLPHSAETCYPRSTPDPNVSSLNGFSYGSIIAPYGKDEV 180

Query: 181 EE-KTKPSSEIK------------PTQIEKDNTASESE------EIEEVQAIPFADPG-- 240
            E   KP +E K            P  +E  N    S+      E  E + +   DP   
Sbjct: 181 NEPAAKPQNESKPISPPAIEAAPVPVPLELSNGRGNSQEKLQKGEESEEKGVDHPDPSPG 240

Query: 241 ------------IGYGNGREVNQFPSGYGLEAMDLCESLFGYWPCLSRIKKQTGCRQPNN 300
                        GY  G    Q P GYGLEAMDLCESLFGYWPCLSR  +     Q   
Sbjct: 241 YDTGIANGSCGEFGYEYGMPGPQIPPGYGLEAMDLCESLFGYWPCLSRYARNVNDCQEAA 300

Query: 301 GCGRCHGHCYCYGNYGNQWQTAADYLFGSHNPYPD----GRSEGDGVYGYQTQYQTEPV 316
            C          G+ GNQW+  ADYLFGS NPY +    G S G+ +YGY+  YQ EP+
Sbjct: 301 DC----------GSRGNQWKGTADYLFGSSNPYGERDDGGNSHGNAIYGYERHYQEEPL 341

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BLAST of Cp4.1LG20g03950 vs. TrEMBL
Match: A0A067JDK9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21309 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.5e-44
Identity = 132/326 (40.49%), Postives = 167/326 (51.23%), Query Frame = 1


Query: 1   MAFYDSYY----DSAQIEPPIPQSSYEPTFYNLFDYPPPCYFGQAYAPYTSNFNEFPQLI 60
           MA+Y S Y       +     P + Y   + N +   PP     A A YT N N+     
Sbjct: 1   MAYYGSSYYMEDGGGEYNSSYPLTPY---YNNSYYDSPPIQDSMATAYYTYNSND----- 60

Query: 61  EYQPVDH-GAYGYTISYSANACSASTFSVPKVIEYDPDLYSDGYQKVSSQFVISYSVSEF 120
              P+   G Y    SYS  A + S  S PK +EYDP      Y    ++F+ SYSVS+F
Sbjct: 61  ---PIPFFGTYDSVSSYSRIAYAVSATSEPKHMEYDPV----PYYSAQTRFITSYSVSQF 120

Query: 121 NETEFEEYDPTPYGGGYDIHETYGKPLQPSTDICYSPSSSSPPKPPPTAIQEAPKEKIEE 180
           NE +FEEYDPTPYGGGYD   TYGKPL PS   CY  S+     P P  +    KE+++E
Sbjct: 121 NEPDFEEYDPTPYGGGYDQTVTYGKPLPPSDQTCYPRST-----PDPVILPLNEKEELKE 180

Query: 181 KT-KPSSEIKPTQ-----IEKDNTASESEEIEEVQAIPFADPGIGYGNGREVNQFPSGYG 240
            T KP ++ KPT+      E+   +S  EE  + +++    P  G      V+Q P GYG
Sbjct: 181 DTPKPETQTKPTEGAETEQEQQQQSSFQEEESKEKSVDDYYPWSGSTGVPSVSQVPYGYG 240

Query: 241 LEAMDLCESLFGYWPCLSRIKKQTGCRQPNNGCGRCHGHCYCYGNYGNQWQTAADYLFGS 300
           LEAMD+CE LFGYWPCLSR +++            C   C   GN   QW  AADYLFGS
Sbjct: 241 LEAMDICEGLFGYWPCLSRYRRKWD---------ECEQDC---GNRSTQWNMAADYLFGS 294

Query: 301 HNPY----PDGRSEGDGVYGYQTQYQ 312
            NPY     DG    +G+Y YQ QYQ
Sbjct: 301 PNPYSQRNDDGSCSWNGMYSYQRQYQ 294

[Close]

BLAST of Cp4.1LG20g03950 vs. TrEMBL
Match: W9R7U3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026029 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.4e-42
Identity = 127/327 (38.84%), Postives = 170/327 (51.99%), Query Frame = 1


Query: 20  SSY--EPTFYNLFDYPPPCYFGQAYAPYTSNFNEFPQLIEYQPVDHGAYGYTISYSANAC 79
           SSY  +P+ YNLFDY P  Y    Y  Y  ++++                YT S+S    
Sbjct: 40  SSYNKDPSIYNLFDYDPTPY----YHAYNRSYDQ----------------YTPSWSTTCY 99

Query: 80  SASTFSVPKVIEYDPD-LYSDGY-QKVSSQFVISYSVSEFNETEFEEYDPTPYGGGYDIH 139
           S  T +  K I Y+P+  +   Y QK  +QFV SYSVS FN  +F++YDPTPY GGYDI 
Sbjct: 100 STFTRTESKSIVYEPNSCHVISYDQKPRTQFVTSYSVSAFNVPDFDDYDPTPYDGGYDIA 159

Query: 140 ETYGKPLQPSTDICYSPSSSSPPKPPPTAIQEAPKEKIE-------EKTKPSSEIKPTQI 199
           +TYGKPL P+  ICY  S++       +  ++  +EK         EKTK   E KP + 
Sbjct: 160 QTYGKPLPPTDQICYPRSTAEITNVLTSDDKDKEREKAHDDHESQAEKTK--KESKPEET 219

Query: 200 EKDNTASESEEIEEVQAIPFADPGI-------------GYGNGREVNQFPSGYGLEAMDL 259
            K+    E EE E  + +   + G              GY  G +V+Q PSGYGLEAMDL
Sbjct: 220 VKEEEEEEEEEEEAKKELGHEENGTNYKERTEEVGGGNGYEYGNQVSQIPSGYGLEAMDL 279

Query: 260 CESLFGYWPCLSRIKKQT---GCRQPNNGCGRCHGHCYCYGNYGNQWQTAADYLFGSHNP 316
           CES+FGYWPC +R  ++     C +   GCG  +G+ Y Y      W  AA+YLFGS +P
Sbjct: 280 CESIFGYWPCFARYARRANNGNCHEGEYGCGYGYGYGYNY-----HWNGAAEYLFGSSDP 339

[Close]

BLAST of Cp4.1LG20g03950 vs. TrEMBL
Match: M5X5K5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025399mg PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.4e-42
Identity = 125/325 (38.46%), Postives = 161/325 (49.54%), Query Frame = 1


Query: 15  PPIPQSSYEPTFYNLFDYPPPCYFGQAYAPYTSNFNEFPQLIEYQPVDHGAYGYTISYSA 74
           P I  SSYEP+F N  +Y P  YF   +                            SYSA
Sbjct: 35  PTISYSSYEPSFQNFLEYDPTPYFHAFH----------------------------SYSA 94

Query: 75  NACSASTFSVPKVIEYDPDLYSDGYQKVSSQFVISYSVSEFNETEFEEYDPTPYGGGYDI 134
           + C +   S    IEY+P  Y   Y    +QF+ISYSVSEFNE +FEEYDPTPY GG+DI
Sbjct: 95  SPCCSKPIS----IEYNPKFYEQSYD---TQFLISYSVSEFNEPDFEEYDPTPYDGGFDI 154

Query: 135 HETYGKPLQPSTDICYSPSSSSPPKPPPTAIQEAPKEK-------------IEEKTKPSS 194
            + YGKPL PS + CY  +  S    P    +E   E+             IEE+     
Sbjct: 155 AQVYGKPLSPSDETCYPLNGGSVSVTPLGGNKEQINEQAAKPINGSQPIPAIEEEQMQHQ 214

Query: 195 EIKPTQIEKDNT--ASESEEIEEVQAIPFAD-----PGIGYGNGREVNQFPSGYGLEAMD 254
           E +  Q  +++T       ++EEV+    +D       + +G  ++ +Q PSGYGLEAMD
Sbjct: 215 ESREDQPSQESTDQGKPDHQVEEVEESKGSDHEHNLGSLSHGYEKQAHQIPSGYGLEAMD 274

Query: 255 LCESLFGYWPCLSR-IKKQTGCRQPNNGCGRCHGHCYCYGNYGNQWQTAADYLFGSHNPY 314
           +CESLFGYWPCLSR  K+     Q  +G GR          YGN W+  ADYLFGS NPY
Sbjct: 275 ICESLFGYWPCLSRDFKRGNDTGQGFSGEGR----------YGNPWEGTADYLFGSSNPY 314

[Close]

BLAST of Cp4.1LG20g03950 vs. TAIR10
Match: AT1G11440.1 (AT1G11440.1 BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G29075.1))

HSP 1 Score: 128.3 bits (321), Expect = 9.1e-30
Identity = 127/383 (33.16%), Postives = 169/383 (44.13%), Query Frame = 1


Query: 3   FYDSY---YDSAQIEPPIPQSSY-----------EPTFYNLFDYPPPCYFGQAYAPYTSN 62
           FY++Y   YD  Q+     Q+ Y           EP  YN +                 N
Sbjct: 4   FYENYQSPYDYNQVNNLYDQNHYHYNQQQQQLGFEPMSYNYY-----------------N 63

Query: 63  FNEFPQLIEY-------QPVDHGAYGYTISYSAN-----ACSASTFSVPKVIEYDPDLYS 122
           +NE     EY        P+ +  Y +  S S       A S ST S PK + YDP+LY+
Sbjct: 64  WNESESESEYVAYSGYDDPMSYNCYNWNGSESETTSAYVAYSVSTMSEPKHLFYDPNLYT 123

Query: 123 DGYQKVSSQFVISYSVS---EFNETEFEEYDPTPYGGGYDIHETYGKPLQPSTDICYSPS 182
             Y+    QF I  SV+   +FNE EF+EYDPTPYGGGYD+  TYGKPL PS + CY P 
Sbjct: 124 T-YES-PPQFSIYCSVASALDFNEPEFDEYDPTPYGGGYDVVATYGKPLPPSVETCY-PC 183

Query: 183 SSSP----PKPP------PTAIQEAPKEKIEEK----TKPSSEIKPTQIEK--------- 242
           S++P    P PP      P  I +  ++ + +K     +P  E+KP +  K         
Sbjct: 184 STAPHAKAPSPPEIIAPVPLGIYDGGQKNVVKKRVSFAEPVEEVKPIETIKEQEQEQDED 243

Query: 243 -----------DNTASESEEIEEVQAIPFADPGIGYGNGR-------EVNQF--PSGYGL 302
                      D+   E EE +E       D    YGN         EV     PSGYGL
Sbjct: 244 YDEESEDEDDGDDDDEEEEEGDEEAKEEEKDHSSSYGNEEYEVVDKGEVKALYVPSGYGL 303

Query: 303 EAMDLCESLF-GYWPCLSRIKKQTGCRQPNNGCGRCHGHCYCYGNYGNQWQTAADYLFGS 308
           EA DLCE +F GY+PC+ R K++    Q       C        N  + W+T +D+LFG 
Sbjct: 304 EATDLCEVIFGGYFPCVLRNKRRQEDEQDRGAAVSC-----WESNDSDPWKTTSDHLFGD 361

[Close]

BLAST of Cp4.1LG20g03950 vs. TAIR10
Match: AT3G29075.1 (AT3G29075.1 glycine-rich protein)

HSP 1 Score: 49.7 bits (117), Expect = 4.1e-06
Identity = 23/47 (48.94%), Postives = 30/47 (63.83%), Query Frame = 1


Query: 110 YSVSEFNETEFEEYDPTPYGGGYDIHETYGKPLQPSTDICYSPSSSS 157
           Y+  + +  +F EYDP PY GGYDI  TYG+ + PS + CY  SS S
Sbjct: 4   YTNDDNDVDDFTEYDPMPYSGGYDITVTYGRSIPPSDETCYPLSSLS 50

[Close]

BLAST of Cp4.1LG20g03950 vs. NCBI nr
Match: gi|659067873|ref|XP_008441695.1| (PREDICTED: uncharacterized protein LOC103485767 [Cucumis melo])

HSP 1 Score: 541.6 bits (1394), Expect = 9.7e-151
Identity = 274/367 (74.66%), Postives = 294/367 (80.11%), Query Frame = 1


Query: 1   MAFYDSY-------YDSAQIEPPIPQSSYEPTFYNLFDYPPPCYFGQAY----------A 60
           MAFYDSY       Y+SAQIEPPI QSS EPTFYNLFDYPPPCYFGQAY          A
Sbjct: 17  MAFYDSYDFYDDSYYNSAQIEPPILQSSNEPTFYNLFDYPPPCYFGQAYDSEVGYFAINA 76

Query: 61  PYTSNFNEFPQLIEYQPVDHGAYGYTISYSANACSASTFSVPKVIEYDPDLYSDGYQKVS 120
            Y SNF+EFPQLIE++PVDHG YGY I YSANACSAS+F++PKV  YDPDLYS+    VS
Sbjct: 77  AYGSNFSEFPQLIEHEPVDHGDYGYAIRYSANACSASSFTLPKVFGYDPDLYSE----VS 136

Query: 121 SQFVISYSVSEFNETEFEEYDPTPYGGGYDIHETYGKPLQPSTDICYSPSSSSPPKPPPT 180
           +QFVISYSVSEFNET+FEEYDPTPY GGYDI+ETYGKPLQPST+ICY PSSSSP KPPP 
Sbjct: 137 TQFVISYSVSEFNETDFEEYDPTPYDGGYDIYETYGKPLQPSTEICYPPSSSSPSKPPPP 196

Query: 181 A-----------IQEAPKEKIEEKTKPSSEIKPTQIEKDN--------TASESEEIEEVQ 240
                       I EAPK KIEE+TKPSSEIKP QIEK N        T SES EIEEV+
Sbjct: 197 TATAIPITTIPKIDEAPKGKIEEQTKPSSEIKPIQIEKTNNSSSSDSDTTSESGEIEEVK 256

Query: 241 AIPFADPGIGYGNGREVNQFPSGYGLEAMDLCESLFGYWPCLSRIKKQTGCRQPNNGCGR 300
           AI   DPGIGYGNGREVN+FPSGYGLEAMDLCESLFGYWPCLSR K+QT CRQP NGCGR
Sbjct: 257 AIQLGDPGIGYGNGREVNEFPSGYGLEAMDLCESLFGYWPCLSRAKRQTLCRQPKNGCGR 316

Query: 301 CHGHCYCYGNYGNQWQTAADYLFGSHNPYPDGRSEGDGVYGYQTQYQTEPVYGYVWLNQD 332
           CHGHCYCYGNYGNQWQTAA+YLFGSHNPY DGR EGDG YGYQ Q+Q EPVYGYVWLNQ+
Sbjct: 317 CHGHCYCYGNYGNQWQTAAEYLFGSHNPYLDGRGEGDGFYGYQRQFQEEPVYGYVWLNQN 376

[Close]

BLAST of Cp4.1LG20g03950 vs. NCBI nr
Match: gi|778658573|ref|XP_011652905.1| (PREDICTED: uncharacterized protein At5g39570 [Cucumis sativus])

HSP 1 Score: 523.1 bits (1346), Expect = 3.6e-145
Identity = 268/372 (72.04%), Postives = 290/372 (77.96%), Query Frame = 1


Query: 1   MAFY-------DSYYDSAQIEPPIPQSSYEPTFYNLFDYPPPCYFGQAY----------A 60
           MAFY       DSYY+ AQIEPPIPQSS EP FYNLFDYPPPCYFGQAY          A
Sbjct: 1   MAFYNSYDFYDDSYYNYAQIEPPIPQSSNEPNFYNLFDYPPPCYFGQAYDYEVGYSANDA 60

Query: 61  PYTSNFNEFPQLIEYQPVDHGAYGYTISYSANACSASTFSVPKVIEYDPDLYSDGYQKVS 120
           PY SNFNE PQLI+++PVDHG YGY I YSANACSAS+F++PK+ EY+PDLYS+    VS
Sbjct: 61  PYRSNFNELPQLIDHEPVDHGDYGYAIRYSANACSASSFTLPKLCEYNPDLYSE----VS 120

Query: 121 SQFVISYSVSEFNETEFEEYDPTPYGGGYDIHETYGKPLQPSTDICYSPSSSSP-----P 180
           +QFVISYSVS+FNETEFEEYDPTPY GGYDI ETYGKPLQPS +ICY PSSSSP     P
Sbjct: 121 TQFVISYSVSQFNETEFEEYDPTPYDGGYDISETYGKPLQPSIEICYPPSSSSPSKSPPP 180

Query: 181 KPPPTA-----------IQEAPKEKIEEKTKPSSEIKPTQIEKDN--------TASESEE 240
            PPPTA           I EAPK KIEE+TKPSSEIKPTQIEK N        T SES E
Sbjct: 181 PPPPTATAIPIITTIPKIDEAPKGKIEEQTKPSSEIKPTQIEKTNNSSSSDSDTTSESGE 240

Query: 241 IEEVQAIPFADPGIGYGNGREVNQFPSGYGLEAMDLCESLFGYWPCLSRIKKQTGCRQPN 300
           IEE +AI   DPGIGYGN REVN+FPSG GLEAMDLCESLFGYWPCLSR K+QT  RQP 
Sbjct: 241 IEEDKAIQLGDPGIGYGNAREVNEFPSGCGLEAMDLCESLFGYWPCLSRAKRQTAYRQPK 300

Query: 301 NGCGRCHGHCYCYGNYGNQWQTAADYLFGSHNPYPDGRSEGDGVYGYQTQYQTEPVYGYV 332
           NGCGRCHGHCYCYGNYGN+WQTAA+YLFGSHNPY DGR EGD VYGYQ Q+Q EPVYGYV
Sbjct: 301 NGCGRCHGHCYCYGNYGNEWQTAAEYLFGSHNPYLDGRREGDVVYGYQRQFQEEPVYGYV 360

[Close]

BLAST of Cp4.1LG20g03950 vs. NCBI nr
Match: gi|743930503|ref|XP_011009503.1| (PREDICTED: uncharacterized protein LOC105114606 [Populus euphratica])

HSP 1 Score: 198.4 bits (503), Expect = 2.0e-47
Identity = 148/370 (40.00%), Postives = 182/370 (49.19%), Query Frame = 1


Query: 1   MAFYD-SYYDSAQIEPPIPQSSYEPTFYNLFDYPPPCYFGQAYAPYTSNFNEFPQLIEYQ 60
           MA+Y   Y D  Q E    Q S  P  YN    P P +   AY+ Y  N+NE   L    
Sbjct: 1   MAYYSYRYEDDYQGEYYTGQYSITP--YNSSYDPSPDHDSVAYSSY--NYNEHQVLAYDP 60

Query: 61  PVDHGAYGYTISYSANACSASTFSVPKVIEYDPDLYSDGYQKVSSQFVISYSVSEFNETE 120
           P  + AY    SYS  A SASTFS P  IEY P      Y    ++F++SY+VSEFNE  
Sbjct: 61  PSYYAAYDPVSSYSRTAYSASTFSEPMCIEYHPG----HYHNEQTRFIVSYNVSEFNEPA 120

Query: 121 FEEYDPTPYGGGYDIHETYGKPLQPSTDICYSPSSSSPPKPPPTAIQ----EAP--KEKI 180
           +EEYDPTPYGGGYD+  TYGKPL  S + CY  S+  P             +AP  K+++
Sbjct: 121 YEEYDPTPYGGGYDLAATYGKPLPHSAETCYPRSTPDPNVSSLNGFSYGSIKAPYGKDEV 180

Query: 181 EE-KTKPSSEIK------------PTQIEKDNTASES-EEIE-----EVQAIPFADPGIG 240
            E   KP +E K            P  +E  N    S EE++     E + +   DP  G
Sbjct: 181 NEPAAKPQNESKPISPPAIEAAPVPVPLELSNGRGNSREELQKGEESEEKGVDHPDPSPG 240

Query: 241 YGNGREVN--------------QFPSGYGLEAMDLCESLFGYWPCLSRIKKQTGCRQPNN 300
           Y  G                  Q P GYGLEAMDLCESLFGYWPCLSR  +     Q   
Sbjct: 241 YDTGIANGSCGEFGYEYGVPGPQIPPGYGLEAMDLCESLFGYWPCLSRYARNVNDCQEAA 300

Query: 301 GCGRCHGHCYCYGNYGNQWQTAADYLFGSHNPYPD----GRSEGDGVYGYQTQYQTEPVY 327
            C          GN+GNQW+  ADYLFGS NPY +    G S G+ +YGY+  YQ EP+Y
Sbjct: 301 DC----------GNHGNQWKGTADYLFGSSNPYGERDDGGNSYGNAIYGYERHYQEEPLY 352

[Close]

BLAST of Cp4.1LG20g03950 vs. NCBI nr
Match: gi|224114215|ref|XP_002316699.1| (hypothetical protein POPTR_0011s03530g [Populus trichocarpa])

HSP 1 Score: 192.2 bits (487), Expect = 1.4e-45
Identity = 142/359 (39.55%), Postives = 174/359 (48.47%), Query Frame = 1


Query: 1   MAFYD-SYYDSAQIEPPIPQSSYEPTFYNLFDYPPPCYFGQAYAPYTSNFNEFPQLIEYQ 60
           MA+Y  SY D  Q E    + S  P  YN    P P +   AY+ Y  N+NE   L    
Sbjct: 1   MAYYSYSYEDDYQGEYYTGEYSITP--YNSSYDPSPDHDSVAYSSY--NYNEHQVLAYDP 60

Query: 61  PVDHGAYGYTISYSANACSASTFSVPKVIEYDPDLYSDGYQKVSSQFVISYSVSEFNETE 120
           P  + AY    SYS  A SASTFS P  IEYDP      Y    ++F++SY+VSEFNE  
Sbjct: 61  PSYYAAYDPVSSYSRTAYSASTFSEPVCIEYDPG----HYYNEQTRFIVSYNVSEFNEPA 120

Query: 121 FEEYDPTPYGGGYDIHETYGKPLQPSTDICYSPSSSSPPKPP------PTAIQEAPKEKI 180
           +EEYDPTPY GGYD+  TYGKPL  S + CY  S+  P           + I    K+++
Sbjct: 121 YEEYDPTPYDGGYDLAATYGKPLPHSAETCYPRSTPDPNVSSLNGFSYGSIIAPYGKDEV 180

Query: 181 EE-KTKPSSEIK------------PTQIEKDNTASESE------EIEEVQAIPFADPG-- 240
            E   KP +E K            P  +E  N    S+      E  E + +   DP   
Sbjct: 181 NEPAAKPQNESKPISPPAIEAAPVPVPLELSNGRGNSQEKLQKGEESEEKGVDHPDPSPG 240

Query: 241 ------------IGYGNGREVNQFPSGYGLEAMDLCESLFGYWPCLSRIKKQTGCRQPNN 300
                        GY  G    Q P GYGLEAMDLCESLFGYWPCLSR  +     Q   
Sbjct: 241 YDTGIANGSCGEFGYEYGMPGPQIPPGYGLEAMDLCESLFGYWPCLSRYARNVNDCQEAA 300

Query: 301 GCGRCHGHCYCYGNYGNQWQTAADYLFGSHNPYPD----GRSEGDGVYGYQTQYQTEPV 316
            C          G+ GNQW+  ADYLFGS NPY +    G S G+ +YGY+  YQ EP+
Sbjct: 301 DC----------GSRGNQWKGTADYLFGSSNPYGERDDGGNSHGNAIYGYERHYQEEPL 341

[Close]

BLAST of Cp4.1LG20g03950 vs. NCBI nr
Match: gi|802780226|ref|XP_012091440.1| (PREDICTED: uncharacterized protein LOC105649416 [Jatropha curcas])

HSP 1 Score: 187.6 bits (475), Expect = 3.6e-44
Identity = 132/326 (40.49%), Postives = 167/326 (51.23%), Query Frame = 1


Query: 1   MAFYDSYY----DSAQIEPPIPQSSYEPTFYNLFDYPPPCYFGQAYAPYTSNFNEFPQLI 60
           MA+Y S Y       +     P + Y   + N +   PP     A A YT N N+     
Sbjct: 1   MAYYGSSYYMEDGGGEYNSSYPLTPY---YNNSYYDSPPIQDSMATAYYTYNSND----- 60

Query: 61  EYQPVDH-GAYGYTISYSANACSASTFSVPKVIEYDPDLYSDGYQKVSSQFVISYSVSEF 120
              P+   G Y    SYS  A + S  S PK +EYDP      Y    ++F+ SYSVS+F
Sbjct: 61  ---PIPFFGTYDSVSSYSRIAYAVSATSEPKHMEYDPV----PYYSAQTRFITSYSVSQF 120

Query: 121 NETEFEEYDPTPYGGGYDIHETYGKPLQPSTDICYSPSSSSPPKPPPTAIQEAPKEKIEE 180
           NE +FEEYDPTPYGGGYD   TYGKPL PS   CY  S+     P P  +    KE+++E
Sbjct: 121 NEPDFEEYDPTPYGGGYDQTVTYGKPLPPSDQTCYPRST-----PDPVILPLNEKEELKE 180

Query: 181 KT-KPSSEIKPTQ-----IEKDNTASESEEIEEVQAIPFADPGIGYGNGREVNQFPSGYG 240
            T KP ++ KPT+      E+   +S  EE  + +++    P  G      V+Q P GYG
Sbjct: 181 DTPKPETQTKPTEGAETEQEQQQQSSFQEEESKEKSVDDYYPWSGSTGVPSVSQVPYGYG 240

Query: 241 LEAMDLCESLFGYWPCLSRIKKQTGCRQPNNGCGRCHGHCYCYGNYGNQWQTAADYLFGS 300
           LEAMD+CE LFGYWPCLSR +++            C   C   GN   QW  AADYLFGS
Sbjct: 241 LEAMDICEGLFGYWPCLSRYRRKWD---------ECEQDC---GNRSTQWNMAADYLFGS 294

Query: 301 HNPY----PDGRSEGDGVYGYQTQYQ 312
            NPY     DG    +G+Y YQ QYQ
Sbjct: 301 PNPYSQRNDDGSCSWNGMYSYQRQYQ 294

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g03950 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG20g03950 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUY1_CUCSA	2.5e-145	72.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G070580 PE=4 SV=1	[more]
B9HYT2_POPTR	1.0e-45	39.55	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s03530g PE=4 SV=1	[more]
A0A067JDK9_JATCU	2.5e-44	40.49	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21309 PE=4 SV=1	[more]
W9R7U3_9ROSA	1.4e-42	38.84	Uncharacterized protein OS=Morus notabilis GN=L484_026029 PE=4 SV=1	[more]
M5X5K5_PRUPE	1.4e-42	38.46	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025399mg PE=4 SV=1	[more]

BLAST of Cp4.1LG20g03950 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G11440.1	9.1e-30	33.16	BEST Arabidopsis thaliana protein match is: glycine-rich protein (TA...	[more]
AT3G29075.1	4.1e-06	48.94	glycine-rich protein	[more]

BLAST of Cp4.1LG20g03950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659067873\|ref\|XP_008441695.1\|	9.7e-151	74.66	PREDICTED: uncharacterized protein LOC103485767 [Cucumis melo]	[more]
gi\|778658573\|ref\|XP_011652905.1\|	3.6e-145	72.04	PREDICTED: uncharacterized protein At5g39570 [Cucumis sativus]	[more]
gi\|743930503\|ref\|XP_011009503.1\|	2.0e-47	40.00	PREDICTED: uncharacterized protein LOC105114606 [Populus euphratica]	[more]
gi\|224114215\|ref\|XP_002316699.1\|	1.4e-45	39.55	hypothetical protein POPTR_0011s03530g [Populus trichocarpa]	[more]
gi\|802780226\|ref\|XP_012091440.1\|	3.6e-44	40.49	PREDICTED: uncharacterized protein LOC105649416 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0070300	phosphatidic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g03950.1	Cp4.1LG20g03950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33971	FAMILY NOT NAMED	coord: 99..314 score: 1.9
None	No IPR available	PANTHER	PTHR33971:SF3	SUBFAMILY NOT NAMED	coord: 99..314 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG20g03950	Cucsa.125960	Cucumber (Gy14) v1	cgycpeB0328
Cp4.1LG20g03950	CmaCh13G006980	Cucurbita maxima (Rimu)	cmacpeB234
Cp4.1LG20g03950	Cla019433	Watermelon (97103) v1	cpewmB503
Cp4.1LG20g03950	Csa1G070580	Cucumber (Chinese Long) v2	cpecuB506
Cp4.1LG20g03950	MELO3C002521	Melon (DHL92) v3.5.1	cpemeB477
Cp4.1LG20g03950	ClCG03G005250	Watermelon (Charleston Gray)	cpewcgB463
Cp4.1LG20g03950	CSPI01G11360	Wild cucumber (PI 183967)	cpecpiB506
Cp4.1LG20g03950	Lsi02G006700	Bottle gourd (USVL1VR-Ls)	cpelsiB417
Cp4.1LG20g03950	MELO3C002521.2	Melon (DHL92) v3.6.1	cpemedB559
Cp4.1LG20g03950	CsaV3_1G011450	Cucumber (Chinese Long) v3	cpecucB0624
Cp4.1LG20g03950	Bhi08G001406	Wax gourd	cpewgoB0655
Cp4.1LG20g03950	CsGy1G011290	Cucumber (Gy14) v2	cgybcpeB070
Cp4.1LG20g03950	Carg07515	Silver-seed gourd	carcpeB1401

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG20g03950	Melon (DHL92) v3.6.1	cpemedB572
Cp4.1LG20g03950	Silver-seed gourd	carcpeB0916
Cp4.1LG20g03950	Silver-seed gourd	carcpeB1118
Cp4.1LG20g03950	Silver-seed gourd	carcpeB1222
Cp4.1LG20g03950	Silver-seed gourd	carcpeB1291
Cp4.1LG20g03950	Cucumber (Chinese Long) v3	cpecucB0650
Cp4.1LG20g03950	Wax gourd	cpewgoB0632
Cp4.1LG20g03950	Wax gourd	cpewgoB0637
Cp4.1LG20g03950	Cucurbita pepo (Zucchini)	cpecpeB048
Cp4.1LG20g03950	Cucurbita pepo (Zucchini)	cpecpeB086
Cp4.1LG20g03950	Cucurbita pepo (Zucchini)	cpecpeB412
Cp4.1LG20g03950	Cucurbita pepo (Zucchini)	cpecpeB437
Cp4.1LG20g03950	Cucurbita pepo (Zucchini)	cpecpeB445
Cp4.1LG20g03950	Cucumber (Gy14) v1	cgycpeB0040
Cp4.1LG20g03950	Cucumber (Gy14) v1	cgycpeB0394
Cp4.1LG20g03950	Cucurbita maxima (Rimu)	cmacpeB044
Cp4.1LG20g03950	Cucurbita maxima (Rimu)	cmacpeB438
Cp4.1LG20g03950	Cucurbita maxima (Rimu)	cmacpeB533
Cp4.1LG20g03950	Cucurbita maxima (Rimu)	cmacpeB677
Cp4.1LG20g03950	Cucurbita maxima (Rimu)	cmacpeB881
Cp4.1LG20g03950	Cucurbita moschata (Rifu)	cmocpeB201
Cp4.1LG20g03950	Cucurbita moschata (Rifu)	cmocpeB403
Cp4.1LG20g03950	Cucurbita moschata (Rifu)	cmocpeB443
Cp4.1LG20g03950	Cucurbita moschata (Rifu)	cmocpeB631
Cp4.1LG20g03950	Cucurbita moschata (Rifu)	cmocpeB818
Cp4.1LG20g03950	Wild cucumber (PI 183967)	cpecpiB527
Cp4.1LG20g03950	Cucumber (Chinese Long) v2	cpecuB525
Cp4.1LG20g03950	Cucumber (Chinese Long) v2	cpecuB526
Cp4.1LG20g03950	Bottle gourd (USVL1VR-Ls)	cpelsiB415
Cp4.1LG20g03950	Watermelon (Charleston Gray)	cpewcgB450
Cp4.1LG20g03950	Watermelon (97103) v1	cpewmB513
Cp4.1LG20g03950	Melon (DHL92) v3.5.1	cpemeB485
Cp4.1LG20g03950	Melon (DHL92) v3.5.1	cpemeB481