Cp4.1LG20g01880 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG20g01880
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Plant/F12B17-70 protein
Location	Cp4.1LG20 : 1125507 .. 1126788 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATGGAAGAACTATTATTTGGACGCCATATTTGTTCCTCTTGGTCTTCTCCTCACCTTCACCTATCATGCTTGGTTATGGTACAAGGTTAAAACTCAGCCACTCGCCACCTTCATCGGAGTCACTGCCACCGTCCGCCGCCACTGGATCTCCGCCATGCTCCAGGTATTTCATCCAACTTTGCATCATTCGTCTAGTAGGTTGGGAATGTGAATATGGGTCCCACACCCATTTTGACCCGTTATGCATCGCCCTTATCTCATGGTTTTGGGAGGTCCAACGTCTTTACTGGAACACCGTCCACGCTAATAGATATTGTTTGCTTTGGCCCATTACATATCTCCATCCGCCTCAATTTTAAAACACGTCTTTTACGAATAGGTTTCTAACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGTTCTTCTAACTTTGCTTCGGGCTTCTCCAAAAAGCCTCAGACTAATGGAGAGTATTCATTGATTATAAACTCATGATCGTTCCCTAAATTAGCCGATGTGGGACTTTCATCATCCAATATAGTTCTCCTCTTCAACCAATATGAGATCTCACAATAAAATTTTGGACGATTTTTCGATTTATACCCTTGCAAGGATAATACGTCACCCATAAGTTTAAAAGGGAATATATTATAAAAGTATATGGTATATGGTAAGAAGTTAGGTTAAGGTAGTTTAGAATAAGAATTTTGAATTCAAATTTAGAAGTTTTGCCAAAATATTTAGTTTGGTGAACAGGACATAGACAAGAAGAACATCCTTGTCGTTCAAACCCTGAGGAACATGATAATGGGTTCAATCTTGATGGCCACCACCTCGATTCTCCTCTGCGCCGGCCTCGCCGCCGTCCTCAGCAGCACCTACAGCATCAAAAAGCCGCTGACCAACGCCGTCTACGGTGCCCACGGGGAGTTCACAGCGGCTCTGAAGTTTATAACAATCCTAACCATATTCATCTTCTCGTTCTTCTTCCACAGTTTGTCGATCAGGTTCATGAACCTTGGTGGGGTTCTGATCAGCGCCCCATTGCAGCCCTTGTCCGTGCTGACAGAGCAGCATTTGGTCGACATTTTGGAGAAAGGCTGTGTTTTGAACACCATTGGAAATAGACTCTTCTATTCAGCTCTCCCATTGGTGCTTTGGATTTGTGGGCCGTTGCTGGTTTTCTTGTGCTTTGGGGTTATGCTGTTTGTGCTTTATAATCTTGACTTTGTGTGTAACAAGAGGATTAATGGGAAGATGAATGAGTGA

mRNA sequence

ATGGAATGGAAGAACTATTATTTGGACGCCATATTTGTTCCTCTTGGTCTTCTCCTCACCTTCACCTATCATGCTTGGTTATGGTACAAGGTTAAAACTCAGCCACTCGCCACCTTCATCGGAGTCACTGCCACCGTCCGCCGCCACTGGATCTCCGCCATGCTCCAGGACATAGACAAGAAGAACATCCTTGTCGTTCAAACCCTGAGGAACATGATAATGGGTTCAATCTTGATGGCCACCACCTCGATTCTCCTCTGCGCCGGCCTCGCCGCCGTCCTCAGCAGCACCTACAGCATCAAAAAGCCGCTGACCAACGCCGTCTACGGTGCCCACGGGGAGTTCACAGCGGCTCTGAAGTTTATAACAATCCTAACCATATTCATCTTCTCGTTCTTCTTCCACAGTTTGTCGATCAGGTTCATGAACCTTGGTGGGGTTCTGATCAGCGCCCCATTGCAGCCCTTGTCCGTGCTGACAGAGCAGCATTTGGTCGACATTTTGGAGAAAGGCTGTGTTTTGAACACCATTGGAAATAGACTCTTCTATTCAGCTCTCCCATTGGTGCTTTGGATTTGTGGGCCGTTGCTGGTTTTCTTGTGCTTTGGGGTTATGCTGTTTGTGCTTTATAATCTTGACTTTGTGTGTAACAAGAGGATTAATGGGAAGATGAATGAGTGA

Coding sequence (CDS)

ATGGAATGGAAGAACTATTATTTGGACGCCATATTTGTTCCTCTTGGTCTTCTCCTCACCTTCACCTATCATGCTTGGTTATGGTACAAGGTTAAAACTCAGCCACTCGCCACCTTCATCGGAGTCACTGCCACCGTCCGCCGCCACTGGATCTCCGCCATGCTCCAGGACATAGACAAGAAGAACATCCTTGTCGTTCAAACCCTGAGGAACATGATAATGGGTTCAATCTTGATGGCCACCACCTCGATTCTCCTCTGCGCCGGCCTCGCCGCCGTCCTCAGCAGCACCTACAGCATCAAAAAGCCGCTGACCAACGCCGTCTACGGTGCCCACGGGGAGTTCACAGCGGCTCTGAAGTTTATAACAATCCTAACCATATTCATCTTCTCGTTCTTCTTCCACAGTTTGTCGATCAGGTTCATGAACCTTGGTGGGGTTCTGATCAGCGCCCCATTGCAGCCCTTGTCCGTGCTGACAGAGCAGCATTTGGTCGACATTTTGGAGAAAGGCTGTGTTTTGAACACCATTGGAAATAGACTCTTCTATTCAGCTCTCCCATTGGTGCTTTGGATTTGTGGGCCGTTGCTGGTTTTCTTGTGCTTTGGGGTTATGCTGTTTGTGCTTTATAATCTTGACTTTGTGTGTAACAAGAGGATTAATGGGAAGATGAATGAGTGA

Protein sequence

MEWKNYYLDAIFVPLGLLLTFTYHAWLWYKVKTQPLATFIGVTATVRRHWISAMLQDIDKKNILVVQTLRNMIMGSILMATTSILLCAGLAAVLSSTYSIKKPLTNAVYGAHGEFTAALKFITILTIFIFSFFFHSLSIRFMNLGGVLISAPLQPLSVLTEQHLVDILEKGCVLNTIGNRLFYSALPLVLWICGPLLVFLCFGVMLFVLYNLDFVCNKRINGKMNE

Homology

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BLAST of Cp4.1LG20g01880 vs. TrEMBL
Match: A0A0A0LR24_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G044920 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 1.6e-98
Identity = 189/227 (83.26%), Postives = 203/227 (89.43%), Query Frame = 1


Query: 1   MEWKNYYLDAIFVPLGLLLTFTYHAWLWYKVKTQPLATFIGVTATVRRHWISAMLQDIDK 60
           MEWKNYYLD I VPLGLLLTF YHAWLWYKVKTQPLATFIGV ATVRR WIS +L+DIDK
Sbjct: 1   MEWKNYYLDVILVPLGLLLTFVYHAWLWYKVKTQPLATFIGVNATVRRQWISPILEDIDK 60

Query: 61  KNILVVQTLRNMIMGSILMATTSILLCAGLAAVLSSTYSIKKPLTNAVYGAHGEFTAALK 120
           KNIL VQTLRNMIMGS LMATTSILLCAGLAAVLSSTYSIKKP+T+ VYGAHGEFTAALK
Sbjct: 61  KNILAVQTLRNMIMGSSLMATTSILLCAGLAAVLSSTYSIKKPVTDTVYGAHGEFTAALK 120

Query: 121 FITILTIFIFSFFFHSLSIRFMNLGGVLISAPLQPLSVLTEQHLVDILEKGCVLNTIGNR 180
           F   LTIF+FSFF H+LSIRFMN   +L+SAPLQPLSVLTE HLV+IL+KGCVLNTIGNR
Sbjct: 121 FTITLTIFVFSFFLHTLSIRFMNQASLLMSAPLQPLSVLTESHLVEILDKGCVLNTIGNR 180

Query: 181 LFYSALPLVLWICGPLLVFLCFGVMLFVLYNLDFVCNKRI---NGKM 225
           +FY ALPLVLW CGPLLVFL FGVM+FVLYNLDFVC+KR    NGK+
Sbjct: 181 IFYLALPLVLWTCGPLLVFLGFGVMVFVLYNLDFVCDKRSSNNNGKI 227

[Close]

BLAST of Cp4.1LG20g01880 vs. TrEMBL
Match: A0A151RKI0_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_035503 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 3.7e-76
Identity = 148/220 (67.27%), Postives = 177/220 (80.45%), Query Frame = 1


Query: 1   MEWKNYYLDAIFVPLGLLLTFTYHAWLWYKVKTQPLATFIGVTATVRRHWISAMLQDIDK 60
           MEWK YYLD + VPLG L+T  YH WLW+KV+TQP +T IG+    RR W+ AML+DI+K
Sbjct: 1   MEWKKYYLDVVLVPLGFLITLGYHVWLWHKVRTQPFSTIIGINTHGRRSWVPAMLKDIEK 60

Query: 61  KNILVVQTLRNMIMGSILMATTSILLCAGLAAVLSSTYSIKKPLTNAVYGAHGEFTAALK 120
           KNIL VQTLRN+IMGS LMATTSILL AGLAAV+SSTYSIKKPL +AVYGAH EF  ALK
Sbjct: 61  KNILAVQTLRNLIMGSTLMATTSILLSAGLAAVISSTYSIKKPLNDAVYGAHSEFMVALK 120

Query: 121 FITILTIFIFSFFFHSLSIRFMNLGGVLISAPLQPLSVLTEQHLVDILEKGCVLNTIGNR 180
           ++T+LTIF+FSFF H+LSIRF N   +LI  P   +S++T Q+L ++LEKG +L+T+GNR
Sbjct: 121 YVTLLTIFLFSFFCHTLSIRFFNQVSILICTPQDVMSMVTPQYLTELLEKGTILSTVGNR 180

Query: 181 LFYSALPLVLWICGPLLVFLCFGVMLFVLYNLDFVCNKRI 221
           LFYSALPL+LWI GP+LVFL    ML VLYNLDFVC  RI
Sbjct: 181 LFYSALPLLLWIFGPVLVFLSSVAMLPVLYNLDFVCRGRI 220

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BLAST of Cp4.1LG20g01880 vs. TrEMBL
Match: B9SPR9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0205190 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 4.9e-76
Identity = 145/225 (64.44%), Postives = 184/225 (81.78%), Query Frame = 1


Query: 1   MEWKNYYLDAIFVPLGLLLTFTYHAWLWYKVKTQPLATFIGVTATVRRHWISAMLQDIDK 60
           MEW+  Y+D + VPLG ++T  YHAWLW+KV+TQPL+T IG  AT RR W+SAM++D DK
Sbjct: 1   MEWRKCYMDVVLVPLGFMITMAYHAWLWHKVRTQPLSTIIGTNATGRRFWVSAMMKDNDK 60

Query: 61  KNILVVQTLRNMIMGSILMATTSILLCAGLAAVLSSTYSIKKPLTNAVYGAHGEFTAALK 120
           KNIL VQTLRN+IMGS LMATTSILL AGLAA++SSTYS+KKPL +AVYGAHGEF  ALK
Sbjct: 61  KNILAVQTLRNLIMGSTLMATTSILLSAGLAAIISSTYSVKKPLNDAVYGAHGEFMVALK 120

Query: 121 FITILTIFIFSFFFHSLSIRFMNLGGVLISAPLQPLSVLTEQHLVDILEKGCVLNTIGNR 180
           ++T+L+IF+FSFF HSLSIRF+N   +LI+ P  P+S++T  ++ ++LEKG +LNT+GNR
Sbjct: 121 YVTLLSIFLFSFFCHSLSIRFVNQVNLLINTPPDPMSIVTPDYVSELLEKGFILNTVGNR 180

Query: 181 LFYSALPLVLWICGPLLVFLCFGVMLFVLYNLDFV-CNKRINGKM 225
           LFY+A+PL+LWI GP+LVFLC   M+ VLYNLDFV  N    GK+
Sbjct: 181 LFYAAMPLLLWIFGPVLVFLCCVTMVPVLYNLDFVFANGTAKGKV 225

[Close]

BLAST of Cp4.1LG20g01880 vs. TrEMBL
Match: V7BDL9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G115300g PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.4e-75
Identity = 149/224 (66.52%), Postives = 179/224 (79.91%), Query Frame = 1


Query: 1   MEWKNYYLDAIFVPLGLLLTFTYHAWLWYKVKTQPLATFIGVTATVRRHWISAMLQDIDK 60
           MEWK YYLD + VPLG L+T  YH WLW+KV+TQP +T IG+    RR W+ AML+DI+K
Sbjct: 1   MEWKKYYLDVVMVPLGFLVTIGYHVWLWHKVRTQPSSTIIGINTHGRRSWVPAMLKDIEK 60

Query: 61  KNILVVQTLRNMIMGSILMATTSILLCAGLAAVLSSTYSIKKPLTNAVYGAHGEFTAALK 120
           KNIL VQTLRNMIMGS LMATTSILL AGLAAV+SSTYS+KKPL +AVYGAH EF  ALK
Sbjct: 61  KNILAVQTLRNMIMGSTLMATTSILLSAGLAAVISSTYSVKKPLNDAVYGAHSEFMVALK 120

Query: 121 FITILTIFIFSFFFHSLSIRFMNLGGVLISAPLQPLSVLTEQHLVDILEKGCVLNTIGNR 180
           ++T+LTIF+FSFF H+LSIRF N   +LI  P   +S++T Q+L D+LEKG +L+T+GNR
Sbjct: 121 YVTLLTIFLFSFFCHTLSIRFFNQLSILICTPQDVMSLVTPQYLSDLLEKGTILSTVGNR 180

Query: 181 LFYSALPLVLWICGPLLVFLCFGVMLFVLYNLDFVCNKRINGKM 225
           LFYSALPL+LWI GP+LVFL    ML VLYNLDFVC   + GK+
Sbjct: 181 LFYSALPLLLWIFGPVLVFLSSVAMLPVLYNLDFVCG-TVRGKV 223

[Close]

BLAST of Cp4.1LG20g01880 vs. TrEMBL
Match: U5GCK4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s29270g PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 4.1e-75
Identity = 144/215 (66.98%), Postives = 179/215 (83.26%), Query Frame = 1


Query: 1   MEWKNYYLDAIFVPLGLLLTFTYHAWLWYKVKTQPLATFIGVTATVRRHWISAMLQDIDK 60
           MEW+  YLD I VPLG +++  YH WLW+KV+TQPL T IG  A+ RR W+SA+++D DK
Sbjct: 1   MEWRKCYLDVILVPLGFMISMAYHGWLWHKVRTQPLTTIIGTNASGRRFWVSAIMKDNDK 60

Query: 61  KNILVVQTLRNMIMGSILMATTSILLCAGLAAVLSSTYSIKKPLTNAVYGAHGEFTAALK 120
           KNIL VQTLRN+IMGS LMATTSILL AGLAA++SSTYS+KKPL +AVYGAHGEF  ALK
Sbjct: 61  KNILAVQTLRNLIMGSTLMATTSILLSAGLAAIISSTYSVKKPLNDAVYGAHGEFMVALK 120

Query: 121 FITILTIFIFSFFFHSLSIRFMNLGGVLISAPLQPLSVLTEQHLVDILEKGCVLNTIGNR 180
           ++TILTIF+FSFF HSLSIRF+N   +LI+ P  P+S++T +++ ++LEKG VLNT+GNR
Sbjct: 121 YVTILTIFMFSFFCHSLSIRFVNQVNLLINTPPDPMSMVTSEYVSELLEKGFVLNTVGNR 180

Query: 181 LFYSALPLVLWICGPLLVFLCFGVMLFVLYNLDFV 216
           LFYSA+PL+LWI GP+LVFLC   M+ VLYNLDFV
Sbjct: 181 LFYSAMPLLLWIFGPVLVFLCSVTMVPVLYNLDFV 215

[Close]

BLAST of Cp4.1LG20g01880 vs. TAIR10
Match: AT4G31330.1 (AT4G31330.1 Protein of unknown function, DUF599)

HSP 1 Score: 270.8 bits (691), Expect = 7.7e-73
Identity = 137/220 (62.27%), Postives = 176/220 (80.00%), Query Frame = 1


Query: 1   MEWKNYYLDAIFVPLGLLLTFTYHAWLWYKVKTQPLATFIGVTATVRRHWISAMLQDIDK 60
           MEW+  YLD I VPLGL++  +YH +LW+K++TQPL T IG  A  RR W++++++D DK
Sbjct: 1   MEWRECYLDVILVPLGLMVYASYHVYLWHKLRTQPLTTIIGTNARARRFWVASIIKDNDK 60

Query: 61  KNILVVQTLRNMIMGSILMATTSILLCAGLAAVLSSTYSIKKPLTNAVYGAHGEFTAALK 120
           KNIL VQTLRN IMGS LMATTSILLCAGLAAVLSSTY++KKPL +AV+GA GEF  ALK
Sbjct: 61  KNILAVQTLRNCIMGSTLMATTSILLCAGLAAVLSSTYAVKKPLNDAVFGARGEFMVALK 120

Query: 121 FITILTIFIFSFFFHSLSIRFMNLGGVLISAPLQP------LSVLTEQHLVDILEKGCVL 180
           ++TILTIF+FSFF HSLSIRF+N   +LI+ P  P      + +  E+++ ++LE+G +L
Sbjct: 121 YVTILTIFLFSFFSHSLSIRFINQVNILINTPFPPEELEDEMMMTAEEYVAELLERGFIL 180

Query: 181 NTIGNRLFYSALPLVLWICGPLLVFLCFGVMLFVLYNLDF 215
           NT+GNRLFY+ALPL+LWI GP+LVFLC  VM+ +LYNLDF
Sbjct: 181 NTVGNRLFYAALPLMLWIFGPVLVFLCSVVMVPLLYNLDF 220

[Close]

BLAST of Cp4.1LG20g01880 vs. TAIR10
Match: AT5G10580.1 (AT5G10580.1 Protein of unknown function, DUF599)

HSP 1 Score: 266.5 bits (680), Expect = 1.5e-71
Identity = 136/223 (60.99%), Postives = 173/223 (77.58%), Query Frame = 1


Query: 1   MEWKNYYLDAIFVPLGLLLTFTYHAWLWYKVKTQPLATFIGVTATVRRHWISAMLQDIDK 60
           MEW+ +YLDA+ VP  LL+ F YH +LWYKV+T P  T +G  +  RR W++A+++D +K
Sbjct: 1   MEWEKWYLDAVLVPSALLMMFGYHIYLWYKVRTDPFCTIVGTNSRARRSWVAAIMKDNEK 60

Query: 61  KNILVVQTLRNMIMGSILMATTSILLCAGLAAVLSSTYSIKKPLTNAVYGAHGEFTAALK 120
           KNIL VQTLRN IMG  LMATT ILLCAGLAAVLSSTYSIKKPL +AVYGAHG+FT ALK
Sbjct: 61  KNILAVQTLRNTIMGGTLMATTCILLCAGLAAVLSSTYSIKKPLNDAVYGAHGDFTVALK 120

Query: 121 FITILTIFIFSFFFHSLSIRFMNLGGVLISAPLQPL--------SVLTEQHLVDILEKGC 180
           ++TILTIF+F+FF HSLSIRF+N   +LI+AP +P         S +T +++ ++LEK  
Sbjct: 121 YVTILTIFLFAFFSHSLSIRFINQVNILINAPQEPFSDDFGEIGSFVTPEYVSELLEKAF 180

Query: 181 VLNTIGNRLFYSALPLVLWICGPLLVFLCFGVMLFVLYNLDFV 216
           +LNT+GNRLFY  LPL+LWI GP+LVFL   +++ VLYNLDFV
Sbjct: 181 LLNTVGNRLFYMGLPLMLWIFGPVLVFLSSALIIPVLYNLDFV 223

[Close]

BLAST of Cp4.1LG20g01880 vs. TAIR10
Match: AT5G24790.1 (AT5G24790.1 Protein of unknown function, DUF599)

HSP 1 Score: 248.1 bits (632), Expect = 5.3e-66
Identity = 131/229 (57.21%), Postives = 169/229 (73.80%), Query Frame = 1


Query: 1   MEWKNYYLDAIFVPLGLLLTFTYHAWLWYKVKTQPLATFIGVTATVRRHWISAMLQDIDK 60
           MEWK +YLDAI VPL L++   YH +L + V+T P +T +G+ +  RR WISAM++D  K
Sbjct: 1   MEWKKWYLDAILVPLALMMMICYHIYLSFMVRTNPFSTLLGINSHGRRIWISAMIKDNQK 60

Query: 61  KNILVVQTLRNMIMGSILMATTSILLCAGLAAVLSSTYSIKKPLTNAVYGAHGEFTAALK 120
            NIL VQTLRN++MG+ LMATT +LLCAGLAAVLSSTYSIKKPL +AV+GAHG+F  ++K
Sbjct: 61  TNILAVQTLRNIVMGATLMATTCVLLCAGLAAVLSSTYSIKKPLNDAVFGAHGDFAISIK 120

Query: 121 FITILTIFIFSFFFHSLSIRFMNLGGVLISAP-LQP----LSVLTEQHLVDILEKGCVLN 180
           ++TILTIFIFSFFFHSLSIRF+N   +L++ P L P       LT +H+ ++ EKG  LN
Sbjct: 121 YLTILTIFIFSFFFHSLSIRFLNQVAILVNIPNLDPNPSGCVFLTSEHVSEMFEKGIFLN 180

Query: 181 TIGNRLFYSALPLVLWICGPLLVFLCFGVMLFVLYNLDFVCNKRINGKM 225
           T+GNRLFY+   L+LWI GP+LVF    VM+ VL +LDFV       K+
Sbjct: 181 TVGNRLFYAGFSLMLWIFGPILVFFSVLVMVLVLSHLDFVSRNNNKEKL 229

[Close]

BLAST of Cp4.1LG20g01880 vs. TAIR10
Match: AT5G24600.1 (AT5G24600.1 Protein of unknown function, DUF599)

HSP 1 Score: 125.9 bits (315), Expect = 3.1e-29
Identity = 78/222 (35.14%), Postives = 124/222 (55.86%), Query Frame = 1


Query: 4   KNYYLDAIFVPLGLLLTFTYHAWLWYKVKTQPLATFIGVTATVRRHWISAMLQDIDKKNI 63
           K  YLD   VPLGL L   YH WL Y++  +P +T +G+ A  RR W+ AM++D  K  +
Sbjct: 2   KREYLDYTLVPLGLALMVFYHLWLLYRIIHRPSSTVVGLNAFNRRLWVQAMMEDSSKNGV 61

Query: 64  LVVQTLRNMIMGSILMATTSILLCAGLAAVLSSTYSIKKPLTNAVYGAHGEFTAALKFIT 123
           L VQTLRN IM S L+A+T+I+LC+ +A +++S    +      V+G   +   +LKF  
Sbjct: 62  LAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSATGERS--VWFVFGDKSDRAFSLKFFA 121

Query: 124 ILTIFIFSFFFHSLSIRFMNLGGVLISAPLQPLS------------VLTEQHLVDILEKG 183
           IL  F+ +F  +  SIR+ +   +LI+ P + L             ++ + ++   + +G
Sbjct: 122 ILVCFLVAFLLNVQSIRYYSHASILINVPFKQLMAVSSGGRGNGSLMINQDYVAATVNRG 181

Query: 184 CVLNTIGNRLFYSALPLVLWICGPLLVFLCFGVMLFVLYNLD 214
               ++G R FY + PL LWI GP+ +F+   V++  LY LD
Sbjct: 182 SYFWSLGLRAFYFSSPLFLWIFGPIPMFITCCVLVCSLYFLD 221

[Close]

BLAST of Cp4.1LG20g01880 vs. TAIR10
Match: AT3G18215.1 (AT3G18215.1 Protein of unknown function, DUF599)

HSP 1 Score: 119.0 bits (297), Expect = 3.7e-27
Identity = 73/211 (34.60%), Postives = 113/211 (53.55%), Query Frame = 1


Query: 3   WKNYYLDAIFVPLGLLLTFTYHAWLWYKVKTQPLATFIGVTATVRRHWISAMLQDIDKKN 62
           W    LD + VP GL++   YH WL Y +  +P  T I + A  RR W+ +M+ +  K  
Sbjct: 2   WTEESLDLVLVPTGLVVMVAYHVWLVYAILHRPKLTVIALNAESRRQWVFSMMTEPLKNG 61

Query: 63  ILVVQTLRNMIMGSILMATTSILLCAGLAAVLSSTYSIKKPLTNAVYGAHGEFTAALKFI 122
            L VQT+RN IM S L+ATT+I LC+ +   +S++ S K   TN +YG+     A+ K  
Sbjct: 62  TLAVQTIRNNIMASTLLATTAITLCSIIGVFVSNSSSSKSTATNLIYGSKSPRLASFKNF 121

Query: 123 TILTIFIFSFFFHSLSIRFMNLGGVLISAPLQPLSVLTEQHLVDILEKGCVLNTIGNRLF 182
            IL  F+ +F  +  SIR+      L++ P+        +++   L +     ++G R F
Sbjct: 122 AILICFLMAFLCNIQSIRYYAHVSFLVTVPVSRGKREHCEYVSRNLNRASYFWSLGLRAF 181

Query: 183 YSALPLVLWICGPLLVFLCFGVMLFVLYNLD 214
           Y + PL LW  GP+ +F+C  +M  +LY LD
Sbjct: 182 YFSFPLFLWTFGPIPMFVCCCMMSSILYFLD 212

[Close]

BLAST of Cp4.1LG20g01880 vs. NCBI nr
Match: gi|700209147|gb|KGN64243.1| (hypothetical protein Csa_1G044920 [Cucumis sativus])

HSP 1 Score: 367.1 bits (941), Expect = 2.2e-98
Identity = 189/227 (83.26%), Postives = 203/227 (89.43%), Query Frame = 1


Query: 1   MEWKNYYLDAIFVPLGLLLTFTYHAWLWYKVKTQPLATFIGVTATVRRHWISAMLQDIDK 60
           MEWKNYYLD I VPLGLLLTF YHAWLWYKVKTQPLATFIGV ATVRR WIS +L+DIDK
Sbjct: 1   MEWKNYYLDVILVPLGLLLTFVYHAWLWYKVKTQPLATFIGVNATVRRQWISPILEDIDK 60

Query: 61  KNILVVQTLRNMIMGSILMATTSILLCAGLAAVLSSTYSIKKPLTNAVYGAHGEFTAALK 120
           KNIL VQTLRNMIMGS LMATTSILLCAGLAAVLSSTYSIKKP+T+ VYGAHGEFTAALK
Sbjct: 61  KNILAVQTLRNMIMGSSLMATTSILLCAGLAAVLSSTYSIKKPVTDTVYGAHGEFTAALK 120

Query: 121 FITILTIFIFSFFFHSLSIRFMNLGGVLISAPLQPLSVLTEQHLVDILEKGCVLNTIGNR 180
           F   LTIF+FSFF H+LSIRFMN   +L+SAPLQPLSVLTE HLV+IL+KGCVLNTIGNR
Sbjct: 121 FTITLTIFVFSFFLHTLSIRFMNQASLLMSAPLQPLSVLTESHLVEILDKGCVLNTIGNR 180

Query: 181 LFYSALPLVLWICGPLLVFLCFGVMLFVLYNLDFVCNKRI---NGKM 225
           +FY ALPLVLW CGPLLVFL FGVM+FVLYNLDFVC+KR    NGK+
Sbjct: 181 IFYLALPLVLWTCGPLLVFLGFGVMVFVLYNLDFVCDKRSSNNNGKI 227

[Close]

BLAST of Cp4.1LG20g01880 vs. NCBI nr
Match: gi|659067050|ref|XP_008437415.1| (PREDICTED: uncharacterized protein LOC103482834 [Cucumis melo])

HSP 1 Score: 365.9 bits (938), Expect = 5.0e-98
Identity = 188/231 (81.39%), Postives = 203/231 (87.88%), Query Frame = 1


Query: 1   MEWKNYYLDAIFVPLGLLLTFTYHAWLWYKVKTQPLATFIGVTATVRRHWISAMLQDIDK 60
           MEWKNYYLD I VP G+ LTF YHAWLWYKVKTQPLATFIGV ATVRR WIS ML+DIDK
Sbjct: 1   MEWKNYYLDVILVPFGISLTFIYHAWLWYKVKTQPLATFIGVNATVRRQWISTMLEDIDK 60

Query: 61  KNILVVQTLRNMIMGSILMATTSILLCAGLAAVLSSTYSIKKPLTNAVYGAHGEFTAALK 120
           KNIL VQTLRNMIMGS LMATTSILLCAGLAAVLSSTYSIKKP+T+ VYGAHGEFTAALK
Sbjct: 61  KNILAVQTLRNMIMGSSLMATTSILLCAGLAAVLSSTYSIKKPVTDTVYGAHGEFTAALK 120

Query: 121 FITILTIFIFSFFFHSLSIRFMNLGGVLISAPLQPLSVLTEQHLVDILEKGCVLNTIGNR 180
           F   LTIF+FSFFFH+LSIRFMN   +L+SAPLQPLSVLTE HLV+IL+KGCVLNTIGNR
Sbjct: 121 FTITLTIFVFSFFFHTLSIRFMNQASLLMSAPLQPLSVLTESHLVEILDKGCVLNTIGNR 180

Query: 181 LFYSALPLVLWICGPLLVFLCFGVMLFVLYNLDFVCNKRING-----KMNE 227
           +FY ALPLVLW CGPLLVFL FGVM+FVLYN+DFVC+KR +      KMNE
Sbjct: 181 IFYLALPLVLWTCGPLLVFLGFGVMVFVLYNVDFVCDKRSSNNHGKIKMNE 231

[Close]

BLAST of Cp4.1LG20g01880 vs. NCBI nr
Match: gi|1012331593|gb|KYP43061.1| (hypothetical protein KK1_035503 [Cajanus cajan])

HSP 1 Score: 292.7 bits (748), Expect = 5.4e-76
Identity = 148/220 (67.27%), Postives = 177/220 (80.45%), Query Frame = 1


Query: 1   MEWKNYYLDAIFVPLGLLLTFTYHAWLWYKVKTQPLATFIGVTATVRRHWISAMLQDIDK 60
           MEWK YYLD + VPLG L+T  YH WLW+KV+TQP +T IG+    RR W+ AML+DI+K
Sbjct: 1   MEWKKYYLDVVLVPLGFLITLGYHVWLWHKVRTQPFSTIIGINTHGRRSWVPAMLKDIEK 60

Query: 61  KNILVVQTLRNMIMGSILMATTSILLCAGLAAVLSSTYSIKKPLTNAVYGAHGEFTAALK 120
           KNIL VQTLRN+IMGS LMATTSILL AGLAAV+SSTYSIKKPL +AVYGAH EF  ALK
Sbjct: 61  KNILAVQTLRNLIMGSTLMATTSILLSAGLAAVISSTYSIKKPLNDAVYGAHSEFMVALK 120

Query: 121 FITILTIFIFSFFFHSLSIRFMNLGGVLISAPLQPLSVLTEQHLVDILEKGCVLNTIGNR 180
           ++T+LTIF+FSFF H+LSIRF N   +LI  P   +S++T Q+L ++LEKG +L+T+GNR
Sbjct: 121 YVTLLTIFLFSFFCHTLSIRFFNQVSILICTPQDVMSMVTPQYLTELLEKGTILSTVGNR 180

Query: 181 LFYSALPLVLWICGPLLVFLCFGVMLFVLYNLDFVCNKRI 221
           LFYSALPL+LWI GP+LVFL    ML VLYNLDFVC  RI
Sbjct: 181 LFYSALPLLLWIFGPVLVFLSSVAMLPVLYNLDFVCRGRI 220

[Close]

BLAST of Cp4.1LG20g01880 vs. NCBI nr
Match: gi|223532614|gb|EEF34400.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 292.4 bits (747), Expect = 7.0e-76
Identity = 145/225 (64.44%), Postives = 184/225 (81.78%), Query Frame = 1


Query: 1   MEWKNYYLDAIFVPLGLLLTFTYHAWLWYKVKTQPLATFIGVTATVRRHWISAMLQDIDK 60
           MEW+  Y+D + VPLG ++T  YHAWLW+KV+TQPL+T IG  AT RR W+SAM++D DK
Sbjct: 1   MEWRKCYMDVVLVPLGFMITMAYHAWLWHKVRTQPLSTIIGTNATGRRFWVSAMMKDNDK 60

Query: 61  KNILVVQTLRNMIMGSILMATTSILLCAGLAAVLSSTYSIKKPLTNAVYGAHGEFTAALK 120
           KNIL VQTLRN+IMGS LMATTSILL AGLAA++SSTYS+KKPL +AVYGAHGEF  ALK
Sbjct: 61  KNILAVQTLRNLIMGSTLMATTSILLSAGLAAIISSTYSVKKPLNDAVYGAHGEFMVALK 120

Query: 121 FITILTIFIFSFFFHSLSIRFMNLGGVLISAPLQPLSVLTEQHLVDILEKGCVLNTIGNR 180
           ++T+L+IF+FSFF HSLSIRF+N   +LI+ P  P+S++T  ++ ++LEKG +LNT+GNR
Sbjct: 121 YVTLLSIFLFSFFCHSLSIRFVNQVNLLINTPPDPMSIVTPDYVSELLEKGFILNTVGNR 180

Query: 181 LFYSALPLVLWICGPLLVFLCFGVMLFVLYNLDFV-CNKRINGKM 225
           LFY+A+PL+LWI GP+LVFLC   M+ VLYNLDFV  N    GK+
Sbjct: 181 LFYAAMPLLLWIFGPVLVFLCCVTMVPVLYNLDFVFANGTAKGKV 225

[Close]

BLAST of Cp4.1LG20g01880 vs. NCBI nr
Match: gi|1000948786|ref|XP_002527988.2| (PREDICTED: uncharacterized protein LOC8282088 [Ricinus communis])

HSP 1 Score: 292.4 bits (747), Expect = 7.0e-76
Identity = 145/225 (64.44%), Postives = 184/225 (81.78%), Query Frame = 1


Query: 1   MEWKNYYLDAIFVPLGLLLTFTYHAWLWYKVKTQPLATFIGVTATVRRHWISAMLQDIDK 60
           MEW+  Y+D + VPLG ++T  YHAWLW+KV+TQPL+T IG  AT RR W+SAM++D DK
Sbjct: 95  MEWRKCYMDVVLVPLGFMITMAYHAWLWHKVRTQPLSTIIGTNATGRRFWVSAMMKDNDK 154

Query: 61  KNILVVQTLRNMIMGSILMATTSILLCAGLAAVLSSTYSIKKPLTNAVYGAHGEFTAALK 120
           KNIL VQTLRN+IMGS LMATTSILL AGLAA++SSTYS+KKPL +AVYGAHGEF  ALK
Sbjct: 155 KNILAVQTLRNLIMGSTLMATTSILLSAGLAAIISSTYSVKKPLNDAVYGAHGEFMVALK 214

Query: 121 FITILTIFIFSFFFHSLSIRFMNLGGVLISAPLQPLSVLTEQHLVDILEKGCVLNTIGNR 180
           ++T+L+IF+FSFF HSLSIRF+N   +LI+ P  P+S++T  ++ ++LEKG +LNT+GNR
Sbjct: 215 YVTLLSIFLFSFFCHSLSIRFVNQVNLLINTPPDPMSIVTPDYVSELLEKGFILNTVGNR 274

Query: 181 LFYSALPLVLWICGPLLVFLCFGVMLFVLYNLDFV-CNKRINGKM 225
           LFY+A+PL+LWI GP+LVFLC   M+ VLYNLDFV  N    GK+
Sbjct: 275 LFYAAMPLLLWIFGPVLVFLCCVTMVPVLYNLDFVFANGTAKGKV 319

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g01880 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG20g01880 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LR24_CUCSA	1.6e-98	83.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G044920 PE=4 SV=1	[more]
A0A151RKI0_CAJCA	3.7e-76	67.27	Uncharacterized protein OS=Cajanus cajan GN=KK1_035503 PE=4 SV=1	[more]
B9SPR9_RICCO	4.9e-76	64.44	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0205190 PE=4 SV=1	[more]
V7BDL9_PHAVU	1.4e-75	66.52	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G115300g PE=4 SV=1	[more]
U5GCK4_POPTR	4.1e-75	66.98	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s29270g PE=4 SV=1	[more]

BLAST of Cp4.1LG20g01880 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G31330.1	7.7e-73	62.27	Protein of unknown function, DUF599	[more]
AT5G10580.1	1.5e-71	60.99	Protein of unknown function, DUF599	[more]
AT5G24790.1	5.3e-66	57.21	Protein of unknown function, DUF599	[more]
AT5G24600.1	3.1e-29	35.14	Protein of unknown function, DUF599	[more]
AT3G18215.1	3.7e-27	34.60	Protein of unknown function, DUF599	[more]

BLAST of Cp4.1LG20g01880 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700209147\|gb\|KGN64243.1\|	2.2e-98	83.26	hypothetical protein Csa_1G044920 [Cucumis sativus]	[more]
gi\|659067050\|ref\|XP_008437415.1\|	5.0e-98	81.39	PREDICTED: uncharacterized protein LOC103482834 [Cucumis melo]	[more]
gi\|1012331593\|gb\|KYP43061.1\|	5.4e-76	67.27	hypothetical protein KK1_035503 [Cajanus cajan]	[more]
gi\|223532614\|gb\|EEF34400.1\|	7.0e-76	64.44	conserved hypothetical protein [Ricinus communis]	[more]
gi\|1000948786\|ref\|XP_002527988.2\|	7.0e-76	64.44	PREDICTED: uncharacterized protein LOC8282088 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006747	DUF599

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g01880.1	Cp4.1LG20g01880.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006747	Protein of unknown function DUF599	PFAM	PF04654	DUF599	coord: 11..215 score: 7.4
None	No IPR available	PANTHER	PTHR31881	FAMILY NOT NAMED	coord: 2..225 score: 1.1E
None	No IPR available	PANTHER	PTHR31881:SF6	SUBFAMILY NOT NAMED	coord: 2..225 score: 1.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG20g01880	Cucsa.097820	Cucumber (Gy14) v1	cgycpeB0203
Cp4.1LG20g01880	CmaCh13G009370	Cucurbita maxima (Rimu)	cmacpeB234
Cp4.1LG20g01880	CmaCh18G001190	Cucurbita maxima (Rimu)	cmacpeB439
Cp4.1LG20g01880	CmoCh13G009680	Cucurbita moschata (Rifu)	cmocpeB201
Cp4.1LG20g01880	CmoCh18G000930	Cucurbita moschata (Rifu)	cmocpeB404
Cp4.1LG20g01880	Csa1G044920	Cucumber (Chinese Long) v2	cpecuB505
Cp4.1LG20g01880	MELO3C002195	Melon (DHL92) v3.5.1	cpemeB478
Cp4.1LG20g01880	CSPI01G07840	Wild cucumber (PI 183967)	cpecpiB505
Cp4.1LG20g01880	Lsi02G003010	Bottle gourd (USVL1VR-Ls)	cpelsiB418
Cp4.1LG20g01880	MELO3C002194.2	Melon (DHL92) v3.6.1	cpemedB560
Cp4.1LG20g01880	CsaV3_1G007800	Cucumber (Chinese Long) v3	cpecucB0623
Cp4.1LG20g01880	Carg06674	Silver-seed gourd	carcpeB0696
Cp4.1LG20g01880	Carg07727	Silver-seed gourd	carcpeB1401

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG20g01880	Cp4.1LG09g10770	Cucurbita pepo (Zucchini)	cpecpeB049

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG20g01880	Watermelon (Charleston Gray)	cpewcgB454
Cp4.1LG20g01880	Watermelon (97103) v1	cpewmB512
Cp4.1LG20g01880	Cucumber (Gy14) v2	cgybcpeB069
Cp4.1LG20g01880	Wax gourd	cpewgoB0635