Cp4.1LG19g11430 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG19g11430
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDof zinc finger protein
LocationCp4.1LG19 : 4969994 .. 4970977 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCCAAGAACTATTTGGTGTTTCAGGGCTTTTAGCTGCACCACCTGGAGACCCCAAAATCTCCATCAATGCTTCAATTCTAGATTCTTCCCCTTCCACTTCCCTCTCTGCACCCACCTCCACCGCAAACACGGCCACACCCACGCCCACAGCCACCTCAAATTCGGAAGCCCAAAACTTGCGGTGCCCCAGATGCGACTCTTCCAACACCAAATTCTGTTACTACAATAACTATAACCTCACTCAACCTCGCCACTTTTGCAAAACATGTCGACGTTATTGGACTAAAGGTGGGGCCCTCAGGAATGTTCCTATTGGTGGTGGCTGTCGGAAGAACAGGACCGCGGCAGCTACGGTGGTGAAATCGGCTGCTGCCAAGATGAAAACGGTGTCGTCTGACATATTTGGTCGGGTTGGTTTTGGAAATGGGTCGGCGTTGGATACCCAACTAATATCGCCAACGCAAATTCTTTGGGGGTCGCCGCAAAATGCACATCTTTTGGCCGTTTTGAGATCCGCTACCCAAAATCAAAACCCTAACCCTAAGAGTCTCGCTAGATCCCACGTCATCAACGGCCCACCGGCCGCGTCGGCTACTGCCACGACGACGACGACGCCGTTTCATGCTAGGACGATGGGGTTTGATCCGGTGAACCATATTTCTTCTCTGGGGCTGTGCAGCTCTTACTGGAGGAACAATCACACCCAAGTTCTTCACCAACAAAATGGACATATCCATGGCAGCGGGGATCACGTTTCCGGCGGCACCACTGGGATTCAGGAGCTGTACCAGAAGCTTAAGTCGTCGTCGAGCAATTATTTCACGGATGGTCAGCAGGGATCAGTGGGGGTGACGAGTGTGGGTACGGCGGCGATTTTGGAGACGTCTCCGGTGGGAGGCGGCGAAACGGCGGCAGGTTACTGGAACCCAACTTTTTCTTGCTCTGATGTTCATGCTAGTGCTAATGGAGCATATCCTTAA

mRNA sequence

ATGATCCAAGAACTATTTGGTGTTTCAGGGCTTTTAGCTGCACCACCTGGAGACCCCAAAATCTCCATCAATGCTTCAATTCTAGATTCTTCCCCTTCCACTTCCCTCTCTGCACCCACCTCCACCGCAAACACGGCCACACCCACGCCCACAGCCACCTCAAATTCGGAAGCCCAAAACTTGCGGTGCCCCAGATGCGACTCTTCCAACACCAAATTCTGTTACTACAATAACTATAACCTCACTCAACCTCGCCACTTTTGCAAAACATGTCGACGTTATTGGACTAAAGGTGGGGCCCTCAGGAATGTTCCTATTGGTGGTGGCTGTCGGAAGAACAGGACCGCGGCAGCTACGGTGGTGAAATCGGCTGCTGCCAAGATGAAAACGGTGTCGTCTGACATATTTGGTCGGGTTGGTTTTGGAAATGGGTCGGCGTTGGATACCCAACTAATATCGCCAACGCAAATTCTTTGGGGGTCGCCGCAAAATGCACATCTTTTGGCCGTTTTGAGATCCGCTACCCAAAATCAAAACCCTAACCCTAAGAGTCTCGCTAGATCCCACGTCATCAACGGCCCACCGGCCGCGTCGGCTACTGCCACGACGACGACGACGCCGTTTCATGCTAGGACGATGGGGTTTGATCCGGTGAACCATATTTCTTCTCTGGGGCTGTGCAGCTCTTACTGGAGGAACAATCACACCCAAGTTCTTCACCAACAAAATGGACATATCCATGGCAGCGGGGATCACGTTTCCGGCGGCACCACTGGGATTCAGGAGCTGTACCAGAAGCTTAAGTCGTCGTCGAGCAATTATTTCACGGATGGTCAGCAGGGATCAGTGGGGGTGACGAGTGTGGGTACGGCGGCGATTTTGGAGACGTCTCCGGTGGGAGGCGGCGAAACGGCGGCAGGTTACTGGAACCCAACTTTTTCTTGCTCTGATGTTCATGCTAGTGCTAATGGAGCATATCCTTAA

Coding sequence (CDS)

ATGATCCAAGAACTATTTGGTGTTTCAGGGCTTTTAGCTGCACCACCTGGAGACCCCAAAATCTCCATCAATGCTTCAATTCTAGATTCTTCCCCTTCCACTTCCCTCTCTGCACCCACCTCCACCGCAAACACGGCCACACCCACGCCCACAGCCACCTCAAATTCGGAAGCCCAAAACTTGCGGTGCCCCAGATGCGACTCTTCCAACACCAAATTCTGTTACTACAATAACTATAACCTCACTCAACCTCGCCACTTTTGCAAAACATGTCGACGTTATTGGACTAAAGGTGGGGCCCTCAGGAATGTTCCTATTGGTGGTGGCTGTCGGAAGAACAGGACCGCGGCAGCTACGGTGGTGAAATCGGCTGCTGCCAAGATGAAAACGGTGTCGTCTGACATATTTGGTCGGGTTGGTTTTGGAAATGGGTCGGCGTTGGATACCCAACTAATATCGCCAACGCAAATTCTTTGGGGGTCGCCGCAAAATGCACATCTTTTGGCCGTTTTGAGATCCGCTACCCAAAATCAAAACCCTAACCCTAAGAGTCTCGCTAGATCCCACGTCATCAACGGCCCACCGGCCGCGTCGGCTACTGCCACGACGACGACGACGCCGTTTCATGCTAGGACGATGGGGTTTGATCCGGTGAACCATATTTCTTCTCTGGGGCTGTGCAGCTCTTACTGGAGGAACAATCACACCCAAGTTCTTCACCAACAAAATGGACATATCCATGGCAGCGGGGATCACGTTTCCGGCGGCACCACTGGGATTCAGGAGCTGTACCAGAAGCTTAAGTCGTCGTCGAGCAATTATTTCACGGATGGTCAGCAGGGATCAGTGGGGGTGACGAGTGTGGGTACGGCGGCGATTTTGGAGACGTCTCCGGTGGGAGGCGGCGAAACGGCGGCAGGTTACTGGAACCCAACTTTTTCTTGCTCTGATGTTCATGCTAGTGCTAATGGAGCATATCCTTAA

Protein sequence

MIQELFGVSGLLAAPPGDPKISINASILDSSPSTSLSAPTSTANTATPTPTATSNSEAQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNRTAAATVVKSAAAKMKTVSSDIFGRVGFGNGSALDTQLISPTQILWGSPQNAHLLAVLRSATQNQNPNPKSLARSHVINGPPAASATATTTTTPFHARTMGFDPVNHISSLGLCSSYWRNNHTQVLHQQNGHIHGSGDHVSGGTTGIQELYQKLKSSSSNYFTDGQQGSVGVTSVGTAAILETSPVGGGETAAGYWNPTFSCSDVHASANGAYP
Homology
[Close]
BLAST of Cp4.1LG19g11430 vs. Swiss-Prot
Match: DOF24_ARATH (Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.0e-27
Identity = 63/131 (48.09%), Postives = 87/131 (66.41%), Query Frame = 1 

Query: 61  LRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNR------ 120
           L+CPRC+S+NTKFCY+NNY+LTQPRHFCKTCRRYWT+GGALRNVP+GGGCR+NR      
Sbjct: 89  LKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNRRTKSNS 148

Query: 121 ------TAAATVVKSAAAKMKTVSSDIFGRVGFGNGSALDTQLISPTQILWGSPQNAHLL 180
                 TA +     ++    T+S+ +    G GN  ++ +Q++SP +++  +P   H L
Sbjct: 149 NNNNNSTATSNNTSFSSGNASTISTILSSHYG-GNQESILSQILSPARLM--NPTYNH-L 208

[Close]
BLAST of Cp4.1LG19g11430 vs. Swiss-Prot
Match: DOF31_ARATH (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1 PE=2 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 1.1e-26
Identity = 59/109 (54.13%), Postives = 77/109 (70.64%), Query Frame = 1 

Query: 56  SEAQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNRT 115
           +E + L+CPRCDS NTKFCYYNNYNL+QPRHFCK+CRRYWTKGGALRNVP+GGG RKN T
Sbjct: 24  AEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKNAT 83

Query: 116 AAATVVKSAAAKMKTVSSDIFGRVGFGNGSALDTQL--ISPTQILWGSP 163
             +T   S+A+     S +   +    +    ++Q   + PT++L+G P
Sbjct: 84  KRSTSSSSSASSPSNSSQNKKTKNPDPDPDPRNSQKPDLDPTRMLYGFP 132

[Close]
BLAST of Cp4.1LG19g11430 vs. Swiss-Prot
Match: DOF17_ARATH (Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana GN=DOF1.7 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.3e-25
Identity = 58/108 (53.70%), Postives = 75/108 (69.44%), Query Frame = 1 

Query: 57  EAQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNRTA 116
           E + L+CPRCDS NTKFCYYNNYNL+QPRHFCK CRRYWTKGGALRN+P+GGG RK+   
Sbjct: 29  EQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSNKR 88

Query: 117 AATVVKSAAAKMKTVSS--DIFGRVGFGNGSALDTQLISPTQILWGSP 163
           + +   S+  K +TV+   D  G         +  Q ++PT++L+G P
Sbjct: 89  SGS-SPSSNLKNQTVAEKPDHHGSGSEEKEERVSGQEMNPTRMLYGLP 135

[Close]
BLAST of Cp4.1LG19g11430 vs. Swiss-Prot
Match: DOF11_ARATH (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1 PE=1 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 2.8e-25
Identity = 53/74 (71.62%), Postives = 61/74 (82.43%), Query Frame = 1 

Query: 61  LRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNRTAAAT- 120
           L+CPRCDSSNTKFCYYNNYNLTQPRHFCK CRRYWT+GGALRNVP+GGGCR+N       
Sbjct: 77  LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKKGKNG 136

Query: 121 VVKSAAAKMKTVSS 134
            +KS+++  K  SS
Sbjct: 137 NLKSSSSSSKQSSS 150

[Close]
BLAST of Cp4.1LG19g11430 vs. Swiss-Prot
Match: DOF54_ARATH (Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4 PE=2 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 6.2e-25
Identity = 52/77 (67.53%), Postives = 61/77 (79.22%), Query Frame = 1 

Query: 59  QNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK-NRTAA 118
           Q+L+CPRC+S NTKFCYYNNYNL+QPRHFCK CRRYWTKGG LRNVP+GGGCRK  R+  
Sbjct: 49  QSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKAKRSKT 108

Query: 119 ATVVKSAAAKMKTVSSD 135
             V  S++A   T + D
Sbjct: 109 KQVPSSSSADKPTTTQD 125

[Close]
BLAST of Cp4.1LG19g11430 vs. TrEMBL
Match: A0A0A0KGA6_CUCSA (F-box family protein OS=Cucumis sativus GN=Csa_6G490130 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 1.7e-125
Identity = 255/344 (74.13%), Postives = 276/344 (80.23%), Query Frame = 1 

Query: 1   MIQELFGVSGLLAAPPGDPKISIN--ASILDSSPSTSLSAPTSTAN----TATPTPTATS 60
           MIQELFGVSGLLAA  GD KISIN   SILDSSPSTSLSA  + A+    T T TPT +S
Sbjct: 1   MIQELFGVSGLLAAA-GDTKISINNTCSILDSSPSTSLSASATAASNATVTTTATPTTSS 60

Query: 61  NSEAQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNR 120
           NSE QNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKN+
Sbjct: 61  NSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNK 120

Query: 121 TAAATVV----KSAAAKMKTVSSDIFGRVGFGNGSALDTQLI-SPTQILWGSPQNAHLLA 180
           +AAATV     KS + KMKT+SS+I GRVGFGNGSALD ++I SPTQILWGSPQN+HLLA
Sbjct: 121 SAAATVAAAVGKSTSGKMKTLSSEILGRVGFGNGSALDHEIISSPTQILWGSPQNSHLLA 180

Query: 181 VLRSATQNQNPNPKSLARSHVINGPPAASATATTTTTPFHARTMGFD--PVN-HISSLGL 240
           +LRSAT  QNPNP +L  SHVIN  P  S      TTPFHARTMGFD  P   H+SSLGL
Sbjct: 181 ILRSAT--QNPNPSNLTASHVINNDPPPS------TTPFHARTMGFDDPPAGPHVSSLGL 240

Query: 241 CSSYWRNNHTQVLHQQNGHIHGSGDHVSGGTTGIQELYQKLKSSSSNYFTDGQQGSVGVT 300
           CSSYWRNN  QV HQQNG+ HG GD V  G +GIQELYQKLKSSS+NYF+D  QGSVGVT
Sbjct: 241 CSSYWRNNQNQVHHQQNGYPHGGGDQVHSGASGIQELYQKLKSSSNNYFSDSHQGSVGVT 300

Query: 301 SV---GTAAILETSPVGGGETAAGYWNPTFSCSDVHASANGAYP 328
           +V    TAAILE +PVGGGE   G+WNP FS SDVHASANGAYP
Sbjct: 301 NVATTATAAILEAAPVGGGE-MTGFWNPAFSWSDVHASANGAYP 334

[Close]
BLAST of Cp4.1LG19g11430 vs. TrEMBL
Match: B9S8M1_RICCO (Zinc finger protein, putative OS=Ricinus communis GN=RCOM_0602390 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.1e-76
Identity = 179/352 (50.85%), Postives = 228/352 (64.77%), Query Frame = 1 

Query: 1   MIQELFGVSGLLAAPPGDPKISINASILDSSPS-----------TSLSAPTSTANTATPT 60
           MIQEL G +GL+    G+ KISI  +IL+ +PS           T+ SA  +TA   T T
Sbjct: 1   MIQELLGGAGLIG---GETKISIAGTILEGTPSHSPSLSPSSSTTTTSATAATATATTTT 60

Query: 61  PTATSNSEAQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGG 120
             +T++S ++NLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGG
Sbjct: 61  ANSTTSSTSENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGG 120

Query: 121 CRKNR--TAAATVVKSAAAKMKTVSSDIFGRVGFGNGSALDTQLISPTQILWGSPQNAHL 180
           CRKN+    +A+V KS+  KMKT+ S+I GR  FGN    D +L S + I+W SP N+HL
Sbjct: 121 CRKNKNTVVSASVAKSSNNKMKTMVSEI-GRSSFGN--VFDHELPSSSPIMWASPHNSHL 180

Query: 181 LAVLRSATQNQNPNPKSLARSHVINGPPAAS--------ATATTTTTPFHARTMGFDPVN 240
           L +LR+   N NPNP S   S+ +               A  T  T   +ART+G D ++
Sbjct: 181 LTLLRA---NHNPNPNSTTLSNSLGVKEETGCMIGTQMMAETTGATGALNARTLGMDHLS 240

Query: 241 HISSLGLCSSYWRNNHTQVL-HQQNGHIHGSGDHVSGGTTGIQELYQKLKSSSSNYFTDG 300
            + SLGLCS +W+N+  Q   HQQNG I G   +     +GIQELYQ+L+SS++ Y+TD 
Sbjct: 241 QVPSLGLCSPFWKNSQNQAQHHQQNGFIVGEAQN-----SGIQELYQRLRSSTNTYYTDN 300

Query: 301 QQ---GSVGVTSVGTAAILETSPVGGGETAAGYWNPTFSCSDVHASANGAYP 328
                 +VG +S  ++ ILE+SPV GGE   GYWNPTFS SD+  + NGAYP
Sbjct: 301 SSVVLSNVGSSSTSSSNILESSPVAGGE--LGYWNPTFSWSDL-PTTNGAYP 335

[Close]
BLAST of Cp4.1LG19g11430 vs. TrEMBL
Match: A0A067KJ60_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12335 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.4e-76
Identity = 182/343 (53.06%), Postives = 229/343 (66.76%), Query Frame = 1 

Query: 1   MIQELFGVSGLLAAPPGDPKISINASILDS--SPSTSLSAPTSTANTATP------TPTA 60
           MIQEL G +GL+    G+ KISI  +IL+   SPS SLS  +ST  T+T       T TA
Sbjct: 1   MIQELLGSAGLIG---GERKISIRGTILEGTPSPSPSLSPSSSTTTTSTTSAAAPTTATA 60

Query: 61  TSNSEAQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK 120
            +NS ++NLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK
Sbjct: 61  ANNSTSENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK 120

Query: 121 NR--TAAATVVKSAAAKMKTVSSDIFGRVGFGNGSALDTQLISPTQILWGSPQNAHLLAV 180
           N+  T +A+V KS+A+KMKT+ SDI GR  FGNG   D   +S + I+W SPQN+HLL +
Sbjct: 121 NKNTTVSASVGKSSASKMKTMVSDI-GRSSFGNG--FDHHELSSSPIMWASPQNSHLLTL 180

Query: 181 LRSATQNQNPNPKSLARSHVINGPPA-ASATATTTTTPFHARTMGFDPVNHISSLGLCSS 240
           LR AT N NP+  +L+ S  +       +   T  TT  + RT+G DP+  + SLGLC+ 
Sbjct: 181 LR-ATHNPNPSSNTLSNSLPVKEEGVMGTHLLTEQTTALNPRTLGLDPLTQVPSLGLCTP 240

Query: 241 YWRNNHTQVLHQQNGHIHGSGDHVSGGTTGIQELYQKLKSSSSNYFTDGQQ----GSVGV 300
           +W+N+  Q    Q   +           +GIQELYQ+L+ SS+NY+TD        +VG 
Sbjct: 241 FWKNSQNQAQQHQQTAVG------EAQNSGIQELYQRLR-SSTNYYTDNNSHVILSNVGS 300

Query: 301 TSVGTAA-ILETSPVGGGETAAGYWNPTFSCSDVHASANGAYP 328
           +S  T++ ILE+SPV GGE   GYWNPTFS SD+  + NGAYP
Sbjct: 301 SSTSTSSTILESSPVAGGE--LGYWNPTFSWSDL-PTTNGAYP 326

[Close]
BLAST of Cp4.1LG19g11430 vs. TrEMBL
Match: A0A061DGR6_THECC (F-box family protein OS=Theobroma cacao GN=TCM_000549 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.9e-76
Identity = 186/352 (52.84%), Postives = 233/352 (66.19%), Query Frame = 1 

Query: 1   MIQELFGVSGLLAAPPGDPKISINASILDSSPSTS-----LSAPTSTANTATPTPTATSN 60
           MIQEL G +GL+    G+ KISI  SIL+ +P+ +      S+ TS++ T T   TA  N
Sbjct: 1   MIQELLGGAGLIG---GERKISIGGSILEGTPTATPSPSPSSSTTSSSTTTTTNSTAPPN 60

Query: 61  SEAQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNR- 120
           SE QNLRCPRCDS NTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKN+ 
Sbjct: 61  SENQNLRCPRCDSPNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKN 120

Query: 121 -TAAATVVKSAAAKMKTVSSDIFGRVGFGNGSALDTQLISPTQILWGSPQNAHLLAVLRS 180
            T +A+V KS+AAKMKTV+S+I GR G GNG   + Q    + ILW SPQ++H LA+LR+
Sbjct: 121 TTVSASVGKSSAAKMKTVASEI-GRSGLGNGFDHEIQ---SSPILWASPQSSHFLALLRT 180

Query: 181 ATQNQNPNPKSLARS------------HVINGPPAASATATTTTTPFHARTMGFDPVNHI 240
               QNPNP +L+ S            H++N P A S  A       +ART+G DP++ +
Sbjct: 181 T---QNPNPSTLSNSVSIKEEVSLLGSHMMNEPAAVSTGA------LNARTLGLDPLSQV 240

Query: 241 SSLGLCSSYWRNN-HTQVLHQQ-NGHIHGSGDHVSGGTTGIQELYQKLKSSSSNYFTDGQ 300
            SLGLCS +W+NN H    HQQ NG + G   +     TGIQELYQ+LKSS+S Y++D  
Sbjct: 241 PSLGLCSPFWKNNQHQAQQHQQNNGFLLGEVQN-----TGIQELYQRLKSSAS-YYSDSS 300

Query: 301 Q---GSVGVTSVGTAAILETSPVGGGETAAGYWNPTFSCS-DVHASANGAYP 328
                +V  +S  +++ILE++PV GGE   GYWNP FS S     + NGAYP
Sbjct: 301 AVVLSNVASSSSSSSSILESAPVAGGE--LGYWNPVFSSSWSDLPTTNGAYP 328

[Close]
BLAST of Cp4.1LG19g11430 vs. TrEMBL
Match: A9P9B5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s11620g PE=2 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 3.9e-74
Identity = 179/346 (51.73%), Postives = 228/346 (65.90%), Query Frame = 1 

Query: 1   MIQELFGVSGLLAAPPGDPKISINASILDSSPSTSLSAP------TSTANTATPTPTATS 60
           MIQEL G +GL+    G+ KI INA+IL+ +PS S S        +ST + AT + T ++
Sbjct: 1   MIQELLGGAGLIG---GERKIPINATILEGTPSPSPSLSPSPSPSSSTTSAATTSATNST 60

Query: 61  NSEAQ-NLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKN 120
            S AQ NLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKN
Sbjct: 61  PSSAQENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKN 120

Query: 121 R--TAAATVVKSAAAKMKTVSSDIFGRVGFGNGSALDTQLISPTQILWGSPQNAHLLAVL 180
           +  + +A+V KS   KMKT++SDI GR GFGNG   +   +S + I+W SPQN+H+LA+L
Sbjct: 121 KNTSVSASVGKSGTNKMKTMASDI-GRSGFGNGFEHE---LSSSPIMWASPQNSHILALL 180

Query: 181 RSATQNQNPNPKSLARSHVINGPPAASATATTT-----TTPFHARTMGFDPVNHISSLGL 240
           R+    QNPNP +L+ S  +            +     T   +ART+G DP++ + SLGL
Sbjct: 181 RAT---QNPNPSTLSNSIFVKEEGGLIGNQFISEPGVGTAALNARTLGLDPISQVPSLGL 240

Query: 241 CSSYWRNNHTQVLHQQNGHIHGSGDHVSGGTTGIQELYQKLKSSSSNYFTDGQQGSV--- 300
           CS +W++N     HQQNG   G   +     +GIQELYQ+L+ SS+NY+TD     V   
Sbjct: 241 CSPFWKSNQ----HQQNGFTVGEAQN-----SGIQELYQRLR-SSTNYYTDNPSAIVLSN 300

Query: 301 --GVTSVGTAAILETSPVGGGETAAGYWNPTFSCSDVHASANGAYP 328
               +S  T+ ILE++PV GGE   GYWNP FS SD+  + NGAYP
Sbjct: 301 VATSSSTSTSTILESAPVAGGE--LGYWNPAFSWSDL-PTTNGAYP 323

[Close]
BLAST of Cp4.1LG19g11430 vs. TAIR10
Match: AT2G37590.1 (AT2G37590.1 DNA binding with one finger 2.4)

HSP 1 Score: 124.0 bits (310), Expect = 1.7e-28
Identity = 63/131 (48.09%), Postives = 87/131 (66.41%), Query Frame = 1 

Query: 61  LRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNR------ 120
           L+CPRC+S+NTKFCY+NNY+LTQPRHFCKTCRRYWT+GGALRNVP+GGGCR+NR      
Sbjct: 89  LKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNRRTKSNS 148

Query: 121 ------TAAATVVKSAAAKMKTVSSDIFGRVGFGNGSALDTQLISPTQILWGSPQNAHLL 180
                 TA +     ++    T+S+ +    G GN  ++ +Q++SP +++  +P   H L
Sbjct: 149 NNNNNSTATSNNTSFSSGNASTISTILSSHYG-GNQESILSQILSPARLM--NPTYNH-L 208

[Close]
BLAST of Cp4.1LG19g11430 vs. TAIR10
Match: AT3G21270.1 (AT3G21270.1 DOF zinc finger protein 2)

HSP 1 Score: 122.1 bits (305), Expect = 6.4e-28
Identity = 59/109 (54.13%), Postives = 77/109 (70.64%), Query Frame = 1 

Query: 56  SEAQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNRT 115
           +E + L+CPRCDS NTKFCYYNNYNL+QPRHFCK+CRRYWTKGGALRNVP+GGG RKN T
Sbjct: 24  AEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKNAT 83

Query: 116 AAATVVKSAAAKMKTVSSDIFGRVGFGNGSALDTQL--ISPTQILWGSP 163
             +T   S+A+     S +   +    +    ++Q   + PT++L+G P
Sbjct: 84  KRSTSSSSSASSPSNSSQNKKTKNPDPDPDPRNSQKPDLDPTRMLYGFP 132

[Close]
BLAST of Cp4.1LG19g11430 vs. TAIR10
Match: AT1G51700.1 (AT1G51700.1 DOF zinc finger protein 1)

HSP 1 Score: 118.6 bits (296), Expect = 7.1e-27
Identity = 58/108 (53.70%), Postives = 75/108 (69.44%), Query Frame = 1 

Query: 57  EAQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNRTA 116
           E + L+CPRCDS NTKFCYYNNYNL+QPRHFCK CRRYWTKGGALRN+P+GGG RK+   
Sbjct: 29  EQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSNKR 88

Query: 117 AATVVKSAAAKMKTVSS--DIFGRVGFGNGSALDTQLISPTQILWGSP 163
           + +   S+  K +TV+   D  G         +  Q ++PT++L+G P
Sbjct: 89  SGS-SPSSNLKNQTVAEKPDHHGSGSEEKEERVSGQEMNPTRMLYGLP 135

[Close]
BLAST of Cp4.1LG19g11430 vs. TAIR10
Match: AT1G07640.3 (AT1G07640.3 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 117.5 bits (293), Expect = 1.6e-26
Identity = 53/74 (71.62%), Postives = 61/74 (82.43%), Query Frame = 1 

Query: 61  LRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNRTAAAT- 120
           L+CPRCDSSNTKFCYYNNYNLTQPRHFCK CRRYWT+GGALRNVP+GGGCR+N       
Sbjct: 85  LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKKGKNG 144

Query: 121 VVKSAAAKMKTVSS 134
            +KS+++  K  SS
Sbjct: 145 NLKSSSSSSKQSSS 158

[Close]
BLAST of Cp4.1LG19g11430 vs. TAIR10
Match: AT5G60850.1 (AT5G60850.1 OBF binding protein 4)

HSP 1 Score: 116.3 bits (290), Expect = 3.5e-26
Identity = 52/77 (67.53%), Postives = 61/77 (79.22%), Query Frame = 1 

Query: 59  QNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK-NRTAA 118
           Q+L+CPRC+S NTKFCYYNNYNL+QPRHFCK CRRYWTKGG LRNVP+GGGCRK  R+  
Sbjct: 49  QSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKAKRSKT 108

Query: 119 ATVVKSAAAKMKTVSSD 135
             V  S++A   T + D
Sbjct: 109 KQVPSSSSADKPTTTQD 125

[Close]
BLAST of Cp4.1LG19g11430 vs. NCBI nr
Match: gi|449448350|ref|XP_004141929.1| (PREDICTED: dof zinc finger protein DOF5.3-like [Cucumis sativus])

HSP 1 Score: 457.2 bits (1175), Expect = 2.4e-125
Identity = 255/344 (74.13%), Postives = 276/344 (80.23%), Query Frame = 1 

Query: 1   MIQELFGVSGLLAAPPGDPKISIN--ASILDSSPSTSLSAPTSTAN----TATPTPTATS 60
           MIQELFGVSGLLAA  GD KISIN   SILDSSPSTSLSA  + A+    T T TPT +S
Sbjct: 1   MIQELFGVSGLLAAA-GDTKISINNTCSILDSSPSTSLSASATAASNATVTTTATPTTSS 60

Query: 61  NSEAQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNR 120
           NSE QNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKN+
Sbjct: 61  NSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNK 120

Query: 121 TAAATVV----KSAAAKMKTVSSDIFGRVGFGNGSALDTQLI-SPTQILWGSPQNAHLLA 180
           +AAATV     KS + KMKT+SS+I GRVGFGNGSALD ++I SPTQILWGSPQN+HLLA
Sbjct: 121 SAAATVAAAVGKSTSGKMKTLSSEILGRVGFGNGSALDHEIISSPTQILWGSPQNSHLLA 180

Query: 181 VLRSATQNQNPNPKSLARSHVINGPPAASATATTTTTPFHARTMGFD--PVN-HISSLGL 240
           +LRSAT  QNPNP +L  SHVIN  P  S      TTPFHARTMGFD  P   H+SSLGL
Sbjct: 181 ILRSAT--QNPNPSNLTASHVINNDPPPS------TTPFHARTMGFDDPPAGPHVSSLGL 240

Query: 241 CSSYWRNNHTQVLHQQNGHIHGSGDHVSGGTTGIQELYQKLKSSSSNYFTDGQQGSVGVT 300
           CSSYWRNN  QV HQQNG+ HG GD V  G +GIQELYQKLKSSS+NYF+D  QGSVGVT
Sbjct: 241 CSSYWRNNQNQVHHQQNGYPHGGGDQVHSGASGIQELYQKLKSSSNNYFSDSHQGSVGVT 300

Query: 301 SV---GTAAILETSPVGGGETAAGYWNPTFSCSDVHASANGAYP 328
           +V    TAAILE +PVGGGE   G+WNP FS SDVHASANGAYP
Sbjct: 301 NVATTATAAILEAAPVGGGE-MTGFWNPAFSWSDVHASANGAYP 334

[Close]
BLAST of Cp4.1LG19g11430 vs. NCBI nr
Match: gi|659079400|ref|XP_008440237.1| (PREDICTED: dof zinc finger protein DOF5.3-like [Cucumis melo])

HSP 1 Score: 455.7 bits (1171), Expect = 6.9e-125
Identity = 257/347 (74.06%), Postives = 277/347 (79.83%), Query Frame = 1 

Query: 1   MIQELFGVSGLLAAPPGDPKISIN--ASILDSSPSTSLSAPTSTAN-----TATPTPTAT 60
           MIQELFGVSGLLAA  GD KISIN   SILDSSPSTSLSA  + A      TAT T TAT
Sbjct: 1   MIQELFGVSGLLAAA-GDTKISINNTCSILDSSPSTSLSASATAATNATNATATTTATAT 60

Query: 61  --SNSEAQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCR 120
             SNSE QNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCR
Sbjct: 61  TSSNSEGQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCR 120

Query: 121 KNRTAAATVV----KSAAAKMKTVSSDIFGRVGFGNGSALDTQLI-SPTQILWGSPQNAH 180
           KN++AAATV     KS + KMKT+SS+I GRVGFGNGSALD ++I SPTQILWGSPQN+H
Sbjct: 121 KNKSAAATVAAAVGKSTSGKMKTLSSEILGRVGFGNGSALDHEIISSPTQILWGSPQNSH 180

Query: 181 LLAVLRSATQNQNPNPKSLARSHVINGPPAASATATTTTTPFHARTMGFDPV---NHISS 240
           LLA+LRSAT  QNPNP +LA SHVI+  P  S      TTPFHART GFD      H+SS
Sbjct: 181 LLAILRSAT--QNPNPNNLAASHVISNDPPPS------TTPFHARTTGFDDPPAGTHVSS 240

Query: 241 LGLCSSYWRNNHTQVLHQQNGHIHGSGDHVSGGTTGIQELYQKLKSSSSNYFTDGQQGSV 300
           LGLCSSYWRNN  QV HQQNG+ HG GD V GG +GIQELYQKLKSSS+NYFTDG QGSV
Sbjct: 241 LGLCSSYWRNNQNQVHHQQNGYPHGGGDQVHGGASGIQELYQKLKSSSNNYFTDGHQGSV 300

Query: 301 GVTSV---GTAAILETSPVGGGETAAGYWNPTFSCSDVHASANGAYP 328
           GVT+V    TAAILE +PVGGGE   G+WNP F+ SDVHASANGAYP
Sbjct: 301 GVTNVATTATAAILEAAPVGGGE-MTGFWNPAFTWSDVHASANGAYP 337

[Close]
BLAST of Cp4.1LG19g11430 vs. NCBI nr
Match: gi|255562669|ref|XP_002522340.1| (PREDICTED: dof zinc finger protein DOF3.7 [Ricinus communis])

HSP 1 Score: 295.0 bits (754), Expect = 1.6e-76
Identity = 179/352 (50.85%), Postives = 228/352 (64.77%), Query Frame = 1 

Query: 1   MIQELFGVSGLLAAPPGDPKISINASILDSSPS-----------TSLSAPTSTANTATPT 60
           MIQEL G +GL+    G+ KISI  +IL+ +PS           T+ SA  +TA   T T
Sbjct: 1   MIQELLGGAGLIG---GETKISIAGTILEGTPSHSPSLSPSSSTTTTSATAATATATTTT 60

Query: 61  PTATSNSEAQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGG 120
             +T++S ++NLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGG
Sbjct: 61  ANSTTSSTSENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGG 120

Query: 121 CRKNR--TAAATVVKSAAAKMKTVSSDIFGRVGFGNGSALDTQLISPTQILWGSPQNAHL 180
           CRKN+    +A+V KS+  KMKT+ S+I GR  FGN    D +L S + I+W SP N+HL
Sbjct: 121 CRKNKNTVVSASVAKSSNNKMKTMVSEI-GRSSFGN--VFDHELPSSSPIMWASPHNSHL 180

Query: 181 LAVLRSATQNQNPNPKSLARSHVINGPPAAS--------ATATTTTTPFHARTMGFDPVN 240
           L +LR+   N NPNP S   S+ +               A  T  T   +ART+G D ++
Sbjct: 181 LTLLRA---NHNPNPNSTTLSNSLGVKEETGCMIGTQMMAETTGATGALNARTLGMDHLS 240

Query: 241 HISSLGLCSSYWRNNHTQVL-HQQNGHIHGSGDHVSGGTTGIQELYQKLKSSSSNYFTDG 300
            + SLGLCS +W+N+  Q   HQQNG I G   +     +GIQELYQ+L+SS++ Y+TD 
Sbjct: 241 QVPSLGLCSPFWKNSQNQAQHHQQNGFIVGEAQN-----SGIQELYQRLRSSTNTYYTDN 300

Query: 301 QQ---GSVGVTSVGTAAILETSPVGGGETAAGYWNPTFSCSDVHASANGAYP 328
                 +VG +S  ++ ILE+SPV GGE   GYWNPTFS SD+  + NGAYP
Sbjct: 301 SSVVLSNVGSSSTSSSNILESSPVAGGE--LGYWNPTFSWSDL-PTTNGAYP 335

[Close]
BLAST of Cp4.1LG19g11430 vs. NCBI nr
Match: gi|802641308|ref|XP_012079164.1| (PREDICTED: dof zinc finger protein DOF5.3-like [Jatropha curcas])

HSP 1 Score: 294.7 bits (753), Expect = 2.0e-76
Identity = 182/343 (53.06%), Postives = 229/343 (66.76%), Query Frame = 1 

Query: 1   MIQELFGVSGLLAAPPGDPKISINASILDS--SPSTSLSAPTSTANTATP------TPTA 60
           MIQEL G +GL+    G+ KISI  +IL+   SPS SLS  +ST  T+T       T TA
Sbjct: 1   MIQELLGSAGLIG---GERKISIRGTILEGTPSPSPSLSPSSSTTTTSTTSAAAPTTATA 60

Query: 61  TSNSEAQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK 120
            +NS ++NLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK
Sbjct: 61  ANNSTSENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK 120

Query: 121 NR--TAAATVVKSAAAKMKTVSSDIFGRVGFGNGSALDTQLISPTQILWGSPQNAHLLAV 180
           N+  T +A+V KS+A+KMKT+ SDI GR  FGNG   D   +S + I+W SPQN+HLL +
Sbjct: 121 NKNTTVSASVGKSSASKMKTMVSDI-GRSSFGNG--FDHHELSSSPIMWASPQNSHLLTL 180

Query: 181 LRSATQNQNPNPKSLARSHVINGPPA-ASATATTTTTPFHARTMGFDPVNHISSLGLCSS 240
           LR AT N NP+  +L+ S  +       +   T  TT  + RT+G DP+  + SLGLC+ 
Sbjct: 181 LR-ATHNPNPSSNTLSNSLPVKEEGVMGTHLLTEQTTALNPRTLGLDPLTQVPSLGLCTP 240

Query: 241 YWRNNHTQVLHQQNGHIHGSGDHVSGGTTGIQELYQKLKSSSSNYFTDGQQ----GSVGV 300
           +W+N+  Q    Q   +           +GIQELYQ+L+ SS+NY+TD        +VG 
Sbjct: 241 FWKNSQNQAQQHQQTAVG------EAQNSGIQELYQRLR-SSTNYYTDNNSHVILSNVGS 300

Query: 301 TSVGTAA-ILETSPVGGGETAAGYWNPTFSCSDVHASANGAYP 328
           +S  T++ ILE+SPV GGE   GYWNPTFS SD+  + NGAYP
Sbjct: 301 SSTSTSSTILESSPVAGGE--LGYWNPTFSWSDL-PTTNGAYP 326

[Close]
BLAST of Cp4.1LG19g11430 vs. NCBI nr
Match: gi|590704409|ref|XP_007047150.1| (F-box family protein [Theobroma cacao])

HSP 1 Score: 294.3 bits (752), Expect = 2.7e-76
Identity = 186/352 (52.84%), Postives = 233/352 (66.19%), Query Frame = 1 

Query: 1   MIQELFGVSGLLAAPPGDPKISINASILDSSPSTS-----LSAPTSTANTATPTPTATSN 60
           MIQEL G +GL+    G+ KISI  SIL+ +P+ +      S+ TS++ T T   TA  N
Sbjct: 1   MIQELLGGAGLIG---GERKISIGGSILEGTPTATPSPSPSSSTTSSSTTTTTNSTAPPN 60

Query: 61  SEAQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNR- 120
           SE QNLRCPRCDS NTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKN+ 
Sbjct: 61  SENQNLRCPRCDSPNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKN 120

Query: 121 -TAAATVVKSAAAKMKTVSSDIFGRVGFGNGSALDTQLISPTQILWGSPQNAHLLAVLRS 180
            T +A+V KS+AAKMKTV+S+I GR G GNG   + Q    + ILW SPQ++H LA+LR+
Sbjct: 121 TTVSASVGKSSAAKMKTVASEI-GRSGLGNGFDHEIQ---SSPILWASPQSSHFLALLRT 180

Query: 181 ATQNQNPNPKSLARS------------HVINGPPAASATATTTTTPFHARTMGFDPVNHI 240
               QNPNP +L+ S            H++N P A S  A       +ART+G DP++ +
Sbjct: 181 T---QNPNPSTLSNSVSIKEEVSLLGSHMMNEPAAVSTGA------LNARTLGLDPLSQV 240

Query: 241 SSLGLCSSYWRNN-HTQVLHQQ-NGHIHGSGDHVSGGTTGIQELYQKLKSSSSNYFTDGQ 300
            SLGLCS +W+NN H    HQQ NG + G   +     TGIQELYQ+LKSS+S Y++D  
Sbjct: 241 PSLGLCSPFWKNNQHQAQQHQQNNGFLLGEVQN-----TGIQELYQRLKSSAS-YYSDSS 300

Query: 301 Q---GSVGVTSVGTAAILETSPVGGGETAAGYWNPTFSCS-DVHASANGAYP 328
                +V  +S  +++ILE++PV GGE   GYWNP FS S     + NGAYP
Sbjct: 301 AVVLSNVASSSSSSSSILESAPVAGGE--LGYWNPVFSSSWSDLPTTNGAYP 328

The following BLAST results are available for this feature:
BLAST of Cp4.1LG19g11430 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DOF24_ARATH3.0e-2748.09Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4 PE=2 SV=1[more]
DOF31_ARATH1.1e-2654.13Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1 PE=2 SV=2[more]
DOF17_ARATH1.3e-2553.70Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana GN=DOF1.7 PE=2 SV=1[more]
DOF11_ARATH2.8e-2571.62Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1 PE=1 SV=2[more]
DOF54_ARATH6.2e-2567.53Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4 PE=2 SV=2[more]
BLAST of Cp4.1LG19g11430 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGA6_CUCSA1.7e-12574.13F-box family protein OS=Cucumis sativus GN=Csa_6G490130 PE=4 SV=1[more]
B9S8M1_RICCO1.1e-7650.85Zinc finger protein, putative OS=Ricinus communis GN=RCOM_0602390 PE=4 SV=1[more]
A0A067KJ60_JATCU1.4e-7653.06Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12335 PE=4 SV=1[more]
A0A061DGR6_THECC1.9e-7652.84F-box family protein OS=Theobroma cacao GN=TCM_000549 PE=4 SV=1[more]
A9P9B5_POPTR3.9e-7451.73Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s11620g PE=2 SV=1[more]
BLAST of Cp4.1LG19g11430 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G37590.11.7e-2848.09 DNA binding with one finger 2.4[more]
AT3G21270.16.4e-2854.13 DOF zinc finger protein 2[more]
AT1G51700.17.1e-2753.70 DOF zinc finger protein 1[more]
AT1G07640.31.6e-2671.62 Dof-type zinc finger DNA-binding family protein[more]
AT5G60850.13.5e-2667.53 OBF binding protein 4[more]
BLAST of Cp4.1LG19g11430 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449448350|ref|XP_004141929.1|2.4e-12574.13PREDICTED: dof zinc finger protein DOF5.3-like [Cucumis sativus][more]
gi|659079400|ref|XP_008440237.1|6.9e-12574.06PREDICTED: dof zinc finger protein DOF5.3-like [Cucumis melo][more]
gi|255562669|ref|XP_002522340.1|1.6e-7650.85PREDICTED: dof zinc finger protein DOF3.7 [Ricinus communis][more]
gi|802641308|ref|XP_012079164.1|2.0e-7653.06PREDICTED: dof zinc finger protein DOF5.3-like [Jatropha curcas][more]
gi|590704409|ref|XP_007047150.1|2.7e-7652.84F-box family protein [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG19g11430.1Cp4.1LG19g11430.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePRODOMPD007478coord: 57..114
score: 8.0
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 59..115
score: 2.0
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 63..99
scor
IPR003851Zinc finger, Dof-typePROFILEPS50884ZF_DOF_2coord: 61..115
score: 29
NoneNo IPR availablePANTHERPTHR31992FAMILY NOT NAMEDcoord: 60..317
score: 2.2E
NoneNo IPR availablePANTHERPTHR31992:SF32SUBFAMILY NOT NAMEDcoord: 60..317
score: 2.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG19g11430Cucsa.102190Cucumber (Gy14) v1cgycpeB0220
Cp4.1LG19g11430CmaCh03G009970Cucurbita maxima (Rimu)cmacpeB671
Cp4.1LG19g11430CmaCh07G007250Cucurbita maxima (Rimu)cmacpeB880
Cp4.1LG19g11430CmoCh07G007380Cucurbita moschata (Rifu)cmocpeB817
Cp4.1LG19g11430Cla001818Watermelon (97103) v1cpewmB482
Cp4.1LG19g11430Csa6G490130Cucumber (Chinese Long) v2cpecuB503
Cp4.1LG19g11430MELO3C007535Melon (DHL92) v3.5.1cpemeB449
Cp4.1LG19g11430ClCG01G016610Watermelon (Charleston Gray)cpewcgB425
Cp4.1LG19g11430CSPI06G27840Wild cucumber (PI 183967)cpecpiB503
Cp4.1LG19g11430Lsi01G010030Bottle gourd (USVL1VR-Ls)cpelsiB396
Cp4.1LG19g11430MELO3C007535.2Melon (DHL92) v3.6.1cpemedB531
Cp4.1LG19g11430CsaV3_6G042990Cucumber (Chinese Long) v3cpecucB0618
Cp4.1LG19g11430Bhi03G001469Wax gourdcpewgoB0609
Cp4.1LG19g11430CsGy6G027300Cucumber (Gy14) v2cgybcpeB810
Cp4.1LG19g11430Carg05232Silver-seed gourdcarcpeB1135
Cp4.1LG19g11430Carg00861Silver-seed gourdcarcpeB0563
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG19g11430Cp4.1LG10g02700Cucurbita pepo (Zucchini)cpecpeB076
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG19g11430Cucumber (Chinese Long) v3cpecucB0592
Cp4.1LG19g11430Cucumber (Chinese Long) v3cpecucB0593
Cp4.1LG19g11430Wax gourdcpewgoB0590
Cp4.1LG19g11430Cucurbita pepo (Zucchini)cpecpeB119
Cp4.1LG19g11430Cucurbita pepo (Zucchini)cpecpeB262
Cp4.1LG19g11430Cucurbita pepo (Zucchini)cpecpeB292
Cp4.1LG19g11430Cucurbita pepo (Zucchini)cpecpeB414
Cp4.1LG19g11430Cucurbita pepo (Zucchini)cpecpeB422
Cp4.1LG19g11430Cucurbita pepo (Zucchini)cpecpeB426
Cp4.1LG19g11430Cucumber (Gy14) v1cgycpeB0973
Cp4.1LG19g11430Cucurbita maxima (Rimu)cmacpeB042
Cp4.1LG19g11430Cucurbita maxima (Rimu)cmacpeB532
Cp4.1LG19g11430Cucurbita maxima (Rimu)cmacpeB777
Cp4.1LG19g11430Cucurbita moschata (Rifu)cmocpeB490
Cp4.1LG19g11430Cucurbita moschata (Rifu)cmocpeB624
Cp4.1LG19g11430Wild cucumber (PI 183967)cpecpiB480
Cp4.1LG19g11430Cucumber (Chinese Long) v2cpecuB479
Cp4.1LG19g11430Bottle gourd (USVL1VR-Ls)cpelsiB406
Cp4.1LG19g11430Watermelon (Charleston Gray)cpewcgB428
Cp4.1LG19g11430Watermelon (Charleston Gray)cpewcgB429
Cp4.1LG19g11430Watermelon (97103) v1cpewmB500
Cp4.1LG19g11430Watermelon (97103) v1cpewmB501
Cp4.1LG19g11430Cucumber (Gy14) v2cgybcpeB219
Cp4.1LG19g11430Cucumber (Gy14) v2cgybcpeB221
Cp4.1LG19g11430Melon (DHL92) v3.6.1cpemedB515
Cp4.1LG19g11430Melon (DHL92) v3.6.1cpemedB519
Cp4.1LG19g11430Silver-seed gourdcarcpeB0264