Cp4.1LG19g08420 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG19g08420
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionD6 protein kinase like 2
LocationCp4.1LG19 : 6637719 .. 6639908 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GACTGAGCTATTCGGAGACATCTTTCTTCAGCACTCCTTTTACGCTGCCGAGAAAAGCAAAGGCGCTCAATTCCAGTCCCCTGTTATTATTATTTGTTTTTTGGTATACTTTTCGGCTTCTCTTCCCTTTTGGTTCCTTTTTGCATTGCCTTATCTTCTGGTTCTGTTTCTCGCATCTGGGTCGCGACCTTGCTTTGGATCTGTGATGGGATTTCTCTGAAAACTGTGGTTCTGTGAGAAAGATCTGCCTTTTTGCCTCTTTTATGTTCATATTAGTCGTCCATCATGTTTTTAGAGTTCGTTTTGTAATTTTGTTTCAGTTTAGACTAGTTGAAATTGTACCCAGGAACTTACTGCATTGCAATTGTCTATTTCGTGGTCATTTCATCTATTTCGTAACGCATCCGCTTCATTTAATTCATTTTTCATGATTTTTCATAGATCAATCGTTGCTTTTGGTGGGCTGGAAGGAGATTTCGGATGGGCTGGTGATGGAAGATAGATTGGTCCGAAGAACAGCTGCTGAGGAATGGACCCTTTCACTTTGATTGGTTCTAAGATTGTTTCGTAGCCTTATGGCCTCAATTGCTGGTCCCAAAGCTTCCTCAAATCCGCCACAAAAAACAGCCAATGGTGCAATGGCTAATGGGAAACAAACATCAACTGAAGTAGATTCCCCTCACAATGAAGCTAGAAGCTCAGTAGATCAAGAGAAGAAAACATCAGAATACGGGAGTGTAAAGAGCAGTATATGTAGAGGGAGCACGAGCAGTGATATAAGTGAGGAGAGCTCTTGCAGTAGTTTTAGTAGTAGTATCAGTAAACCTCATAAAGCAAATGATTTGAAATGGGAGGCCATTCAAGTTGTTCGTGCCAAAGATGGGGCGATGGGATTAAGCCATTTTAGACTTTTGAAGAAGTTGGGTTGTGGGGATATTGGGAGTGTCTATCTCTCTGAGTTAAGAGGAACAAAATGTCATTTTGCAATGAAGGTTATGGATAAAAATACTTTAGCCAGTCGTAAAAAATCGCTTCGGGCGCAAACCGAAAGAGAAATACTTCAATCCCTTGATCACCCTTTCCTTCCAACATTATACACTCACTTTGAGACAGAGAAATTCTCATGCTTGGTGATGGAGTTCTGCCTTGGAGGAGACTTGCACACTCTAAGACAGAGGCAACCAGGGAAGCATTTTCCTGAGCATGCAGTGAAGTATGTTGAACTAACATGTGCTGTCTCTGATTTAGCCATATTTGCATATATATGTTGACAATGATACTGATTTTTTTGTGTATGTTTGATAATGCAGATTCTATGTAGCAGAGGTTCTTCTTGCACTGGAGTATCTGCACATGCTTGGGATTGTGTACCGTGATCTTAAGCCAGAGAATATTCTCGTGAGGGAAGATGGACACATAATGCTTTCAGATTTTGATCTATCTCTCCGTTGTGCTGTTAGTCCAACTCTTGTTAAAAACCTCTCTGCAGAGTCTGAGGCTTTAAGAAAGAACACAGGCTACTGCGTGCAGCCTGCTTGCATTGAGCCATCCTGCATCCAACCATCTTGTGTGGTTCCTACGACCTGCTTCGCACCTCGCCTCTTTTCGAGTAAGTTGAAGAAGGATCGGAAACCAAAAATTGAAATGGGGAATCAGGTCAGTCCATTGCCAGAGCTCATTGCAGAGCCAACTGATGCTCGATCCATGTCTTTCGTTGGTACTCATGAGTACTTGGCACCTGAGATCATCAAGGGGGAAGGCCATGGAAGTGCTGTGGATTGGTGGACTTTTGGTATTTTTCTATATGAGCTACTATTTGGTAAAACTCCTTTTAAGGGGTCTGGAAATCGAGCTACGTTGTTCAACATTGTCGGTCAGCCACTTCGGTTTCCTGATGCACCAGTTGTGAGTTTTGCTGCAAAGGATCTCATAAGAGGATTGCTAGTAAAGAAACCAGAACAAAGATTGGGTAATGAACGTGGAGCAACTGAGATCAAGCAGCATCCTTTTTTTGAAGGTGTGAACTGGGCATTAATACGTTGTGCTACTCCTCCTGAAATCCCAAAGCCGGTTGAGATTGAGAGAATACCACACGCACACGCACACGCACACACAGTGGCATCGACCAGTTTAAAGGCCGTTGCTATTGCAGCTGCTGCAGCAGATAAAAAAGCATCCGATAACTATCTC

mRNA sequence

GACTGAGCTATTCGGAGACATCTTTCTTCAGCACTCCTTTTACGCTGCCGAGAAAAGCAAAGGCGCTCAATTCCAGTCCCCTCCTTATGGCCTCAATTGCTGGTCCCAAAGCTTCCTCAAATCCGCCACAAAAAACAGCCAATGGTGCAATGGCTAATGGGAAACAAACATCAACTGAAGTAGATTCCCCTCACAATGAAGCTAGAAGCTCAGTAGATCAAGAGAAGAAAACATCAGAATACGGGAGTGTAAAGAGCAGTATATGTAGAGGGAGCACGAGCAGTGATATAAGTGAGGAGAGCTCTTGCAGTAGTTTTAGTAGTAGTATCAGCTACTGCGTGCAGCCTGCTTGCATTGAGCCATCCTGCATCCAACCATCTTGTGTGGTTCCTACGACCTGCTTCGCACCTCGCCTCTTTTCGACTGCTGCAGCAGATAAAAAAGCATCCGATAACTATCTC

Coding sequence (CDS)

ATGGCCTCAATTGCTGGTCCCAAAGCTTCCTCAAATCCGCCACAAAAAACAGCCAATGGTGCAATGGCTAATGGGAAACAAACATCAACTGAAGTAGATTCCCCTCACAATGAAGCTAGAAGCTCAGTAGATCAAGAGAAGAAAACATCAGAATACGGGAGTGTAAAGAGCAGTATATGTAGAGGGAGCACGAGCAGTGATATAAGTGAGGAGAGCTCTTGCAGTAGTTTTAGTAGTAGTATCAGCTACTGCGTGCAGCCTGCTTGCATTGAGCCATCCTGCATCCAACCATCTTGTGTGGTTCCTACGACCTGCTTCGCACCTCGCCTCTTTTCGACTGCTGCAGCAGATAAAAAAGCATCCGATAACTATCTC

Protein sequence

MASIAGPKASSNPPQKTANGAMANGKQTSTEVDSPHNEARSSVDQEKKTSEYGSVKSSICRGSTSSDISEESSCSSFSSSISYCVQPACIEPSCIQPSCVVPTTCFAPRLFSTAAADKKASDNYL
Homology
[Close]
BLAST of Cp4.1LG19g08420 vs. Swiss-Prot
Match: D6KL2_ARATH (Serine/threonine-protein kinase D6PKL2 OS=Arabidopsis thaliana GN=D6PKL2 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-10
Identity = 29/41 (70.73%), Postives = 33/41 (80.49%), Query Frame = 1 

Query: 83  YCVQPACIEPSCIQPSCVVPTTCFAPRLFSTAAADKKASDN 124
           YCVQPACIEPSCIQPSC VPTTCF+PRLFS+ +   +   N
Sbjct: 363 YCVQPACIEPSCIQPSCTVPTTCFSPRLFSSKSKKDRKPKN 403

[Close]
BLAST of Cp4.1LG19g08420 vs. Swiss-Prot
Match: G11A_ORYSI (Protein kinase G11A OS=Oryza sativa subsp. indica GN=OsI_021818 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 7.0e-09
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 1 

Query: 82  SYCVQPACIEPSC-IQPSCVVPTTCFAPRLFSTAAADKK 120
           +YCVQPAC+EPSC IQPSC  PTTCF PR FS +  D+K
Sbjct: 368 AYCVQPACVEPSCMIQPSCATPTTCFGPRFFSKSKKDRK 406

[Close]
BLAST of Cp4.1LG19g08420 vs. Swiss-Prot
Match: G11A_ORYSJ (Protein kinase G11A OS=Oryza sativa subsp. japonica GN=Os06g0291600 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 7.0e-09
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 1 

Query: 82  SYCVQPACIEPSC-IQPSCVVPTTCFAPRLFSTAAADKK 120
           +YCVQPAC+EPSC IQPSC  PTTCF PR FS +  D+K
Sbjct: 368 AYCVQPACVEPSCMIQPSCATPTTCFGPRFFSKSKKDRK 406

[Close]
BLAST of Cp4.1LG19g08420 vs. TrEMBL
Match: A0A0V0IPG5_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-09
Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 1 

Query: 82  SYCVQPACIEPSCIQPSCVVPTTCFAPRLFSTAAADKKASDN 124
           +YCVQPACIEPSCIQPSC VPTTCF PRLFS+ +  +K S N
Sbjct: 382 AYCVQPACIEPSCIQPSCAVPTTCFGPRLFSSKSKKEKKSKN 423

[Close]
BLAST of Cp4.1LG19g08420 vs. TrEMBL
Match: M1C089_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400022165 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-09
Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 1 

Query: 82  SYCVQPACIEPSCIQPSCVVPTTCFAPRLFSTAAADKKASDN 124
           +YCVQPACIEPSCIQPSC VPTTCF PRLFS+ +  +K S N
Sbjct: 55  AYCVQPACIEPSCIQPSCAVPTTCFGPRLFSSKSKKEKKSKN 96

[Close]
BLAST of Cp4.1LG19g08420 vs. TrEMBL
Match: M1C087_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400022165 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-09
Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 1 

Query: 82  SYCVQPACIEPSCIQPSCVVPTTCFAPRLFSTAAADKKASDN 124
           +YCVQPACIEPSCIQPSC VPTTCF PRLFS+ +  +K S N
Sbjct: 382 AYCVQPACIEPSCIQPSCAVPTTCFGPRLFSSKSKKEKKSKN 423

[Close]
BLAST of Cp4.1LG19g08420 vs. TrEMBL
Match: V4KPU2_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10000825mg PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.9e-09
Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 1 

Query: 83  YCVQPACIEPSCIQPSCVVPTTCFAPRLFSTAAADKKASDN 124
           YCVQPACIEPSCIQPSC VPTTCF+PRLFS+ +   + S N
Sbjct: 364 YCVQPACIEPSCIQPSCTVPTTCFSPRLFSSKSKKDRKSKN 404

[Close]
BLAST of Cp4.1LG19g08420 vs. TrEMBL
Match: A0A068V1G8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00038726001 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 8.3e-09
Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = 1 

Query: 83  YCVQPACIEPSCIQPSCVVPTTCFAPRLFSTAAADKKASDN 124
           YCVQPACIEPSCIQPSCVVPTTCF PR+FS+ +  ++   N
Sbjct: 387 YCVQPACIEPSCIQPSCVVPTTCFTPRIFSSKSKKERKPKN 427

[Close]
BLAST of Cp4.1LG19g08420 vs. TAIR10
Match: AT5G47750.1 (AT5G47750.1 D6 protein kinase like 2)

HSP 1 Score: 67.0 bits (162), Expect = 9.3e-12
Identity = 29/41 (70.73%), Postives = 33/41 (80.49%), Query Frame = 1 

Query: 83  YCVQPACIEPSCIQPSCVVPTTCFAPRLFSTAAADKKASDN 124
           YCVQPACIEPSCIQPSC VPTTCF+PRLFS+ +   +   N
Sbjct: 363 YCVQPACIEPSCIQPSCTVPTTCFSPRLFSSKSKKDRKPKN 403

[Close]
BLAST of Cp4.1LG19g08420 vs. NCBI nr
Match: gi|565358608|ref|XP_006346118.1| (PREDICTED: serine/threonine-protein kinase D6PKL1-like [Solanum tuberosum])

HSP 1 Score: 70.5 bits (171), Expect = 2.4e-09
Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 1 

Query: 82  SYCVQPACIEPSCIQPSCVVPTTCFAPRLFSTAAADKKASDN 124
           +YCVQPACIEPSCIQPSC VPTTCF PRLFS+ +  +K S N
Sbjct: 382 AYCVQPACIEPSCIQPSCAVPTTCFGPRLFSSKSKKEKKSKN 423

[Close]
BLAST of Cp4.1LG19g08420 vs. NCBI nr
Match: gi|698568352|ref|XP_009774023.1| (PREDICTED: serine/threonine-protein kinase D6PK-like [Nicotiana sylvestris])

HSP 1 Score: 70.5 bits (171), Expect = 2.4e-09
Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 1 

Query: 82  SYCVQPACIEPSCIQPSCVVPTTCFAPRLFSTAAADKKASDN 124
           +YCVQPACIEPSCIQPSC VPTTCF PRLFS+ +  +K S N
Sbjct: 366 AYCVQPACIEPSCIQPSCAVPTTCFGPRLFSSKSKKEKKSKN 407

[Close]
BLAST of Cp4.1LG19g08420 vs. NCBI nr
Match: gi|697105176|ref|XP_009606402.1| (PREDICTED: serine/threonine-protein kinase D6PKL2-like [Nicotiana tomentosiformis])

HSP 1 Score: 70.5 bits (171), Expect = 2.4e-09
Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 1 

Query: 82  SYCVQPACIEPSCIQPSCVVPTTCFAPRLFSTAAADKKASDN 124
           +YCVQPACIEPSCIQPSC VPTTCF PRLFS+ +  +K S N
Sbjct: 366 AYCVQPACIEPSCIQPSCAVPTTCFGPRLFSSKSKKEKKSKN 407

[Close]
BLAST of Cp4.1LG19g08420 vs. NCBI nr
Match: gi|747099379|ref|XP_011097742.1| (PREDICTED: serine/threonine-protein kinase D6PKL2-like [Sesamum indicum])

HSP 1 Score: 69.7 bits (169), Expect = 4.1e-09
Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 1 

Query: 83  YCVQPACIEPSCIQPSCVVPTTCFAPRLFSTAAADKKASDN 124
           YCVQPACIEPSCIQPSC+VPTTCF PRLFS+ +   + S N
Sbjct: 379 YCVQPACIEPSCIQPSCIVPTTCFGPRLFSSKSRKDRKSKN 419

[Close]
BLAST of Cp4.1LG19g08420 vs. NCBI nr
Match: gi|567168773|ref|XP_006398476.1| (hypothetical protein EUTSA_v10000825mg [Eutrema salsugineum])

HSP 1 Score: 68.9 bits (167), Expect = 7.0e-09
Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 1 

Query: 83  YCVQPACIEPSCIQPSCVVPTTCFAPRLFSTAAADKKASDN 124
           YCVQPACIEPSCIQPSC VPTTCF+PRLFS+ +   + S N
Sbjct: 364 YCVQPACIEPSCIQPSCTVPTTCFSPRLFSSKSKKDRKSKN 404

The following BLAST results are available for this feature:
BLAST of Cp4.1LG19g08420 vs. Swiss-Prot
Match NameE-valueIdentityDescription
D6KL2_ARATH1.7e-1070.73Serine/threonine-protein kinase D6PKL2 OS=Arabidopsis thaliana GN=D6PKL2 PE=1 SV... [more]
G11A_ORYSI7.0e-0969.23Protein kinase G11A OS=Oryza sativa subsp. indica GN=OsI_021818 PE=2 SV=1[more]
G11A_ORYSJ7.0e-0969.23Protein kinase G11A OS=Oryza sativa subsp. japonica GN=Os06g0291600 PE=2 SV=1[more]
BLAST of Cp4.1LG19g08420 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0V0IPG5_SOLCH1.7e-0973.81Putative ovule protein OS=Solanum chacoense PE=4 SV=1[more]
M1C089_SOLTU1.7e-0973.81Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400022165 PE=4 SV=1[more]
M1C087_SOLTU1.7e-0973.81Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400022165 PE=4 SV=1[more]
V4KPU2_EUTSA4.9e-0973.17Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10000825mg PE=4 SV=1[more]
A0A068V1G8_COFCA8.3e-0970.73Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00038726001 PE=4 SV=1[more]
BLAST of Cp4.1LG19g08420 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G47750.19.3e-1270.73 D6 protein kinase like 2[more]
BLAST of Cp4.1LG19g08420 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|565358608|ref|XP_006346118.1|2.4e-0973.81PREDICTED: serine/threonine-protein kinase D6PKL1-like [Solanum tuberosum][more]
gi|698568352|ref|XP_009774023.1|2.4e-0973.81PREDICTED: serine/threonine-protein kinase D6PK-like [Nicotiana sylvestris][more]
gi|697105176|ref|XP_009606402.1|2.4e-0973.81PREDICTED: serine/threonine-protein kinase D6PKL2-like [Nicotiana tomentosiformi... [more]
gi|747099379|ref|XP_011097742.1|4.1e-0973.17PREDICTED: serine/threonine-protein kinase D6PKL2-like [Sesamum indicum][more]
gi|567168773|ref|XP_006398476.1|7.0e-0973.17hypothetical protein EUTSA_v10000825mg [Eutrema salsugineum][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005730 nucleolus
molecular_function GO:0003674 molecular_function
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0004672 protein kinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG19g08420.1Cp4.1LG19g08420.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG19g08420MELO3C008002.2Melon (DHL92) v3.6.1cpemedB531
Cp4.1LG19g08420CsaV3_6G048190Cucumber (Chinese Long) v3cpecucB0618
Cp4.1LG19g08420Carg00518Silver-seed gourdcarcpeB0563
Cp4.1LG19g08420Carg07891Silver-seed gourdcarcpeB0915
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG19g08420Cp4.1LG10g10220Cucurbita pepo (Zucchini)cpecpeB076
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG19g08420Wax gourdcpewgoB0607
Cp4.1LG19g08420Cucumber (Gy14) v1cgycpeB0039
Cp4.1LG19g08420Cucurbita maxima (Rimu)cmacpeB671
Cp4.1LG19g08420Cucurbita maxima (Rimu)cmacpeB880
Cp4.1LG19g08420Cucurbita moschata (Rifu)cmocpeB624
Cp4.1LG19g08420Cucurbita moschata (Rifu)cmocpeB817
Cp4.1LG19g08420Wild cucumber (PI 183967)cpecpiB503
Cp4.1LG19g08420Cucumber (Chinese Long) v2cpecuB503
Cp4.1LG19g08420Bottle gourd (USVL1VR-Ls)cpelsiB396
Cp4.1LG19g08420Watermelon (Charleston Gray)cpewcgB425
Cp4.1LG19g08420Watermelon (97103) v1cpewmB482
Cp4.1LG19g08420Melon (DHL92) v3.5.1cpemeB449
Cp4.1LG19g08420Cucumber (Gy14) v2cgybcpeB810