Cp4.1LG19g08200 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG19g08200
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Protein of unknown function (DUF506)
Location	Cp4.1LG19 : 6718594 .. 6720907 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCAACAAAATGGATAGATTTGCTGAAATCTTCCGCCATGGTGCTGAAGCTGCCGTCAGGGACACCAGCAGCGGCAGCGAACATTCGCCGGAAAACTCCGCCGCCGACCTCTTCGACCTCGTCAAATCGTTCATGGAAAGAGATGATGTGGAAATTAATGAAGGGGAGGAGGAGGATGGCGGTAAAGAAGAATCAGATAGTTTCTCTTGTGATTCAGATGCAGGGGTTATCAAACTAAGAAATCTGTTTGGTTCACGGGATAATAAGAGTGACGAGATCAGAATCGAAGCAGAACAAGCACTGAAGAAGCTCGTCGGAGGAAGATCGTTTCAGGGGATTAAACGAAAATTGATGGCACATTTGCGCAGAAAAGGATTCGATGCCGGTGAGTTTGAGTTTCGTTTTCAGTTTAAATTGAACCCAATTTTCGTTGAGGGAGTTTAATTCACTTGATGTTGTTTGGCTCGTGCAGGACTCTGCAAATCGAAGGGGGAGAAACTGCACTCATTTCCGGCAGGGGATCATGAGTACATCGACGTCAATTTTAGTGGAAATCGGTACATTGTAGAAGTATTTCTAGCCAGAGAATTTGAAATTGCCCGTCCGACCAGAAAATACACGTCATTACTCAACACATTTCCCGAGATCTTCGTCGGAAATCTGGAGGAGCTGAAGCAGGTGGTGAAACTAATGTGCTCTGCCATGAAACAATCCATGAATATTAGGAACATGCATGTGCCTCCATGGAGAAGAAAGGGGTACATGCAGGAGAAATGGTTTGGTTCTTACAAGCGGACCACAAACCATAAAGGGTCAGGATCGGCAGAAGCAGAAACCTCGCCGGGAATGAGTTCAGCCTGTTTCAAAGCCAGCCATTGCAGAGGAGATTTTGGTCGAAACAGAGGTATCATGGTTGGAAATTTAACCGCTGCCTTCGGCGCCGATGGGTTGCTACTGTAGTCAATAAATTGTACATAAAATCTGCTCATATTGATTGTTCGTATTAGGGGTTTGATTCTTTTTGTTCTTGTGCATTTTTTGTCCCAAGTTTCGCAACCAAATGCGGAGAAATCTATACAGATCTTTAAACAGGGCTTTAACTTGATTTGAGCTACAAATTTCAGAGCCCTAGAAATACAAACAGTCCCAATTTCAGAATTTCCATTTTCAACAATTCCTTTGTTCAGTAAATTACAGACATACAATCCCGATCTCTTAGAAATGTAGGCACCGATAGACGCAAACTGCTAGGAAATCAAAGCAGCTTGCCTGGACGGAGACGAAAAAAAAATTTGATGCGAGGGAAGGTTCAAAACCCTATAGCATCTCATAATCAAACAAAAACCAGACACAAAAAACTCATCCAAAACGGATTGAGAAGAAAATAAAATATAAGAAGTTGGGTAAGCAGATTCGTCGACGAAGATCCGATTAGATCGAATTCAACGACCGGCCAGTTAACTTCTCTGGGATTGATTTAGCTGCAGCCTCTTCGGCAGGTCAAGAACAAAGGAATCGATTAACTCTCACCCTTGTCTTGGTACATGCAGCCATAGGAAAACAGATCTTACAAATCCAAGTTTAGAATGCGAAAGACATAGCTTCCAGTTCCACATCGATGAGAACATTGTCTATTGAATGAATTGGGGGAGACGACGAAGTCGTGGAGGATGCTGTGAGAAGGACAGATTATTAGCCCTAGCGAGGCCATTTAAAAGGACGGTTAGTGAAGCGGAAAGAGGACGGGTTCGGGAGATCGTGACCGTTGATCTTTACAGGCGACGAGATGGGGTTTGTTTTTAGCTATAATTATTTTTTAATTATTTTTTAAATGCTAAATTAAACATATGTCGGTCTTATATTTCCCTGGTCTGCCCGCTGACTTTTATATATAAATATATTTGATATTGAATTTTGAATTTAAAAAAATTATGTTAAACACGATAGTTTTACATTTTATTAATAGAAGTGATATTAAAAATGAAAATTATCTATTAATTTTTTTTTTAAATATATATATATAAATAAAATTTAGACAATTCCCATGGAAATTCCTATTGCTAATGAATTTTTTGTCACGACAAGAACCAGAAAGCAAGACAAAGCTGTGAAAATCTAGAATGGTTTCTTCGCAGGCTTATCTCGGTGTTTGGCATTTAACAAGCATGTTGGAGCTCGAACATCTTGAATCATGGATGAAGAGTCGTCTACGAAGTTCTTCTTGATCCCTTTTGGTAGGTCATGTTCATCGTTTTCTGATGTGGAAAGAAATTCAGTTGGAAAAGATGGAGTTATGTCCAACATTTTTTAA

mRNA sequence

ATGCCCAACAAAATGGATAGATTTGCTGAAATCTTCCGCCATGGTGCTGAAGCTGCCGTCAGGGACACCAGCAGCGGCAGCGAACATTCGCCGGAAAACTCCGCCGCCGACCTCTTCGACCTCGTCAAATCGTTCATGGAAAGAGATGATGTGGAAATTAATGAAGGGGAGGAGGAGGATGGCGGTAAAGAAGAATCAGATAGTTTCTCTTGTGATTCAGATGCAGGGGTTATCAAACTAAGAAATCTGTTTGGTTCACGGGATAATAAGAGTGACGAGATCAGAATCGAAGCAGAACAAGCACTGAAGAAGCTCGTCGGAGGAAGATCGTTTCAGGGGATTAAACGAAAATTGATGGCACATTTGCGCAGAAAAGGATTCGATGCCGGACTCTGCAAATCGAAGGGGGAGAAACTGCACTCATTTCCGGCAGGGGATCATGAGTACATCGACGTCAATTTTAGTGGAAATCGGTCATGTTCATCGTTTTCTGATGTGGAAAGAAATTCAGTTGGAAAAGATGGAGTTATGTCCAACATTTTTTAA

Coding sequence (CDS)

ATGCCCAACAAAATGGATAGATTTGCTGAAATCTTCCGCCATGGTGCTGAAGCTGCCGTCAGGGACACCAGCAGCGGCAGCGAACATTCGCCGGAAAACTCCGCCGCCGACCTCTTCGACCTCGTCAAATCGTTCATGGAAAGAGATGATGTGGAAATTAATGAAGGGGAGGAGGAGGATGGCGGTAAAGAAGAATCAGATAGTTTCTCTTGTGATTCAGATGCAGGGGTTATCAAACTAAGAAATCTGTTTGGTTCACGGGATAATAAGAGTGACGAGATCAGAATCGAAGCAGAACAAGCACTGAAGAAGCTCGTCGGAGGAAGATCGTTTCAGGGGATTAAACGAAAATTGATGGCACATTTGCGCAGAAAAGGATTCGATGCCGGACTCTGCAAATCGAAGGGGGAGAAACTGCACTCATTTCCGGCAGGGGATCATGAGTACATCGACGTCAATTTTAGTGGAAATCGGTCATGTTCATCGTTTTCTGATGTGGAAAGAAATTCAGTTGGAAAAGATGGAGTTATGTCCAACATTTTTTAA

Protein sequence

MPNKMDRFAEIFRHGAEAAVRDTSSGSEHSPENSAADLFDLVKSFMERDDVEINEGEEEDGGKEESDSFSCDSDAGVIKLRNLFGSRDNKSDEIRIEAEQALKKLVGGRSFQGIKRKLMAHLRRKGFDAGLCKSKGEKLHSFPAGDHEYIDVNFSGNRSCSSFSDVERNSVGKDGVMSNIF

Homology

[Close]

BLAST of Cp4.1LG19g08200 vs. TrEMBL
Match: A0A0A0KL43_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511780 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.5e-35
Identity = 89/154 (57.79%), Postives = 104/154 (67.53%), Query Frame = 1


Query: 5   MDRFAEIFRHGAEAAVRDTSSGSEHSPENSAADLFDLVKSFMERDDVEINEGEEEDGGKE 64
           MDR A +FRH A+++  +  SGS+HSPE   ADLFDLVKSF+E+ D+E  EGE ED   E
Sbjct: 1   MDRLAALFRHRADSSFSE--SGSDHSPEKPTADLFDLVKSFIEKGDLEFKEGEREDCCTE 60

Query: 65  ESDSFSCDSDAGVIKLRNLFGSRDNKSDEIRIEAEQALKKLVGGRSFQGIKRKLMAHLRR 124
           ESD FS DSDAGV+KLRNLFGS +NK++EIRIE EQALK +                   
Sbjct: 61  ESDGFSFDSDAGVVKLRNLFGSVENKNEEIRIETEQALKLV------------------- 120

Query: 125 KGFDAGLCKSKGEKLHSFPAGDHEYIDVNFSGNR 159
                GLCKSK EK  +FPAGDHEYIDVNF GNR
Sbjct: 121 -----GLCKSKMEKPRAFPAGDHEYIDVNFGGNR 128

[Close]

BLAST of Cp4.1LG19g08200 vs. TrEMBL
Match: G7JKH5_MEDTR (DUF506 family protein OS=Medicago truncatula GN=MTR_4g132940 PE=4 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 9.5e-22
Identity = 73/159 (45.91%), Postives = 98/159 (61.64%), Query Frame = 1


Query: 1   MPNKMDRFAEIFRHGAEAAVR-DTSSGSEHSPENSAADLFDLVKSFMERDDVEINEGEEE 60
           +P + +R A  F     A VR   SSGSEHSPE+S  DL DLVKSF+E++ V   E +  
Sbjct: 5   IPVRFERVAAAFESDEVARVRLCESSGSEHSPESST-DLSDLVKSFLEKNSVRAEE-DAV 64

Query: 61  DGGKEESDSFSCDSDAGVIKLRNLFGSRDNKSDEIRIEAEQALKKLVGGRSFQGIKRKLM 120
              KE+ D    D +     L+ +F   D   ++IR EAE A++ + G +S  G KR +M
Sbjct: 65  AFDKEDRDFEWYDYEEKREILKEIFN--DTVKEKIRREAELAIEVVGGDKSSPGFKRMVM 124

Query: 121 AHLRRKGFDAGLCKSKGEKLHSFPAGDHEYIDVNFSGNR 159
           + LR +GFDAGLCKSK E+   FP+GD+EYIDVN+ GNR
Sbjct: 125 SRLRERGFDAGLCKSKWERNRKFPSGDYEYIDVNYGGNR 159

[Close]

BLAST of Cp4.1LG19g08200 vs. TrEMBL
Match: A0A067JA80_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21147 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 8.9e-20
Identity = 66/164 (40.24%), Postives = 95/164 (57.93%), Query Frame = 1


Query: 1   MPNKMDRFAEIFRHGAEAAVRDTSSGSEHSPENSAADLFDLVKSFMERD---DVEINEGE 60
           +P +  +    F   A   + ++S    +SP+NS  DL DLV SF+ERD   + +     
Sbjct: 4   IPFRFQKMGAAFSEAARMRLCESSGSEHYSPDNSDHDLSDLVNSFIERDYRIEADNERHL 63

Query: 61  EEDGGKEESDSFSCDSDAGVIKLRNLFGSRDNKSDEIR--IEAE-QALKKLVGGRSFQGI 120
           E D   E  +++  DS      L+NLF   DN  D++R  I AE Q    ++G RS QG 
Sbjct: 64  ENDSNLEALENYCSDSAENKQLLQNLFN--DNGDDDVRRNISAETQFACGIIGERSSQGF 123

Query: 121 KRKLMAHLRRKGFDAGLCKSKGEKLHSFPAGDHEYIDVNFSGNR 159
           KR+LM+ LR +GFDAGLCKS+ EK    P+G++EY+DVN +G+R
Sbjct: 124 KRRLMSRLRDQGFDAGLCKSRWEKFGRHPSGEYEYVDVNVNGDR 165

[Close]

BLAST of Cp4.1LG19g08200 vs. TrEMBL
Match: G7JKH8_MEDTR (DUF506 family protein OS=Medicago truncatula GN=MTR_4g132970 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.4e-19
Identity = 70/172 (40.70%), Postives = 98/172 (56.98%), Query Frame = 1


Query: 1   MPNKMDRFAEIFRHGAEAAVR-DTSSGSEHSPENSAADLFDLVKSFMERDDVEINEGEEE 60
           +P ++++    F+    A  R   SSGSEH PE+   DL DLVKSFME++ V+    +  
Sbjct: 9   IPVRIEKVTAAFKSDEAARGRLCESSGSEHWPESFTDDLSDLVKSFMEKNSVKSFMEKNS 68

Query: 61  DG---GKEESDSFSCDSDAGVIK---------LRNLFGSR-DNKSDEIRIEAEQALKKLV 120
            G   GKE++  F  + D              L+ +FG   D   ++IR E E A++ + 
Sbjct: 69  VGAVQGKEDAFDFDNNDDRDFEWYDYEEKKDILKEIFGGDYDFVKEKIRREVELAIQVVG 128

Query: 121 GGRSFQGIKRKLMAHLRRKGFDAGLCKSKGEKLHSFPAGDHEYIDVNFSGNR 159
           G +S  G KR +M+ LR  GFDAGLCKSK E+   FP+GD+EYIDVN+ GNR
Sbjct: 129 GDKSSSGFKRIIMSRLRESGFDAGLCKSKWERNRKFPSGDYEYIDVNYGGNR 180

[Close]

BLAST of Cp4.1LG19g08200 vs. TrEMBL
Match: A0A061FV12_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_012425 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.4e-19
Identity = 75/166 (45.18%), Postives = 105/166 (63.25%), Query Frame = 1


Query: 1   MPNKMDRFAEIFRHGAEAAVR-DTSSGSEHSPENSAADLFDLVKSFMERD-DVEINEGE- 60
           +P +++R A  F   A+A  R   SSGSEHSPE S  DL DLV SF ERD +VE +EG+ 
Sbjct: 5   IPARLNRIAVAFNEAAKAPRRLCESSGSEHSPEGST-DLSDLVNSFFERDFEVENDEGKV 64

Query: 61  EEDGGKE--ESDSFSCDSDAGVIKLRNLFGSRD-NKSDEIRI----EAEQALKKLVGGRS 120
            ++G KE  E+D +  +S+A       L  + D N+ DE++     E E A   ++G R 
Sbjct: 65  HQEGEKELDETDGYWSESEAKHTLQSLLSNAHDGNQEDEMKQKICRETELACG-IIGDRL 124

Query: 121 FQGIKRKLMAHLRRKGFDAGLCKSKGEKLHSFPAGDHEYIDVNFSG 157
            +  KR+LM+ LR KGFDAGLCKS+ +KL  +PAG++EY+DVN +G
Sbjct: 125 SKDFKRQLMSRLRDKGFDAGLCKSQWKKLRYYPAGNYEYVDVNVNG 168

[Close]

BLAST of Cp4.1LG19g08200 vs. TAIR10
Match: AT1G12030.1 (AT1G12030.1 Protein of unknown function (DUF506) )

HSP 1 Score: 75.1 bits (183), Expect = 5.0e-14
Identity = 55/130 (42.31%), Postives = 78/130 (60.00%), Query Frame = 1


Query: 23  TSSGSEHSPENSAADLFDLVKSFMERDDVEINEGEEEDGGKEESDSFSCDSDAGVIKLRN 82
           +SSGS+HSP+++  DL+DLV+SF++R+     E   ED  +EE D  S D D   +K R 
Sbjct: 28  SSSGSDHSPDDTE-DLWDLVESFIDREV----ETLPEDAFQEEEDDKS-DEDYEDVKERL 87

Query: 83  LFGSRDNKSDEIRIEAEQALKKLVGGRSFQGIKRKLMAHLRRKGFDAGLCKSKGEKLHSF 142
                ++  +E +   ++A+      R F G KR  MA+LR KGFDAGLCKS+ EK    
Sbjct: 88  REILENHGGEERQRIMDEAVN---ASRVFAGEKRHFMAYLRNKGFDAGLCKSRWEKFGKN 147

Query: 143 PAGDHEYIDV 153
            AG +EY+DV
Sbjct: 148 TAGKYEYVDV 148

[Close]

BLAST of Cp4.1LG19g08200 vs. TAIR10
Match: AT1G62420.1 (AT1G62420.1 Protein of unknown function (DUF506) )

HSP 1 Score: 65.1 bits (157), Expect = 5.1e-11
Identity = 57/154 (37.01%), Postives = 79/154 (51.30%), Query Frame = 1


Query: 22  DTSSGSEHSPENSAADLFDLVKSFMERDDVEINEGEEEDGGKEESDSFSCDSDAGVIKLR 81
           D SSGS+HSP     DL DLV SF+E++  +I   EEE+   ++++    +      +LR
Sbjct: 27  DNSSGSDHSP-----DLSDLVASFIEKEG-QIVLREEEETSSDDNNLEDVNE-----RLR 86

Query: 82  NLFGSRDNKSDEIRIEAE--QALKKLVGGRSFQGIKRKLMAHLRRKGFDAGLCKSKGEKL 141
            L        + +RI +   +     VG  S    KR LMA LR KGFDAGLCKS  E+ 
Sbjct: 87  KLLEGLSCGEERMRILSATMEVAGTFVGDISSS--KRHLMAFLRNKGFDAGLCKSSWERF 146

Query: 142 HSFPAGDHEYIDVNFSGNRSCSSFSDVERNSVGK 174
                G +EY+DV   G+ +   F  VE N  G+
Sbjct: 147 GKNTGGKYEYVDVRCGGDYNNRYF--VETNLAGE 165

[Close]

BLAST of Cp4.1LG19g08200 vs. NCBI nr
Match: gi|659079073|ref|XP_008440059.1| (PREDICTED: uncharacterized protein LOC103484651 [Cucumis melo])

HSP 1 Score: 212.2 bits (539), Expect = 7.4e-52
Identity = 112/154 (72.73%), Postives = 127/154 (82.47%), Query Frame = 1


Query: 5   MDRFAEIFRHGAEAAVRDTSSGSEHSPENSAADLFDLVKSFMERDDVEINEGEEEDGGKE 64
           MDR A +FR+GA+++V +  SGS+HSPE   ADLFDLVKSF+E+ D E  EGE ED   E
Sbjct: 1   MDRLAAVFRYGADSSVWE--SGSDHSPEKPTADLFDLVKSFIEKGDFEFKEGETEDSCTE 60

Query: 65  ESDSFSCDSDAGVIKLRNLFGSRDNKSDEIRIEAEQALKKLVGGRSFQGIKRKLMAHLRR 124
           ESD FS DSDAGV+KLRNLFGS +NK++EIRIE EQALK LVGGRS  GI R+LMAHLRR
Sbjct: 61  ESDGFSFDSDAGVVKLRNLFGSLENKNEEIRIETEQALK-LVGGRSVPGINRQLMAHLRR 120

Query: 125 KGFDAGLCKSKGEKLHSFPAGDHEYIDVNFSGNR 159
           KGFDAGLCKSK EKL +FPAGDHEYIDVNF GNR
Sbjct: 121 KGFDAGLCKSKMEKLRAFPAGDHEYIDVNFGGNR 151

[Close]

BLAST of Cp4.1LG19g08200 vs. NCBI nr
Match: gi|449434012|ref|XP_004134790.1| (PREDICTED: uncharacterized protein LOC101205314 [Cucumis sativus])

HSP 1 Score: 205.7 bits (522), Expect = 6.9e-50
Identity = 109/154 (70.78%), Postives = 125/154 (81.17%), Query Frame = 1


Query: 5   MDRFAEIFRHGAEAAVRDTSSGSEHSPENSAADLFDLVKSFMERDDVEINEGEEEDGGKE 64
           MDR A +FRH A+++  +  SGS+HSPE   ADLFDLVKSF+E+ D+E  EGE ED   E
Sbjct: 1   MDRLAALFRHRADSSFSE--SGSDHSPEKPTADLFDLVKSFIEKGDLEFKEGEREDCCTE 60

Query: 65  ESDSFSCDSDAGVIKLRNLFGSRDNKSDEIRIEAEQALKKLVGGRSFQGIKRKLMAHLRR 124
           ESD FS DSDAGV+KLRNLFGS +NK++EIRIE EQALK LVGGRS  GI R+LMAHLRR
Sbjct: 61  ESDGFSFDSDAGVVKLRNLFGSVENKNEEIRIETEQALK-LVGGRSLPGINRQLMAHLRR 120

Query: 125 KGFDAGLCKSKGEKLHSFPAGDHEYIDVNFSGNR 159
           +GFDAGLCKSK EK  +FPAGDHEYIDVNF GNR
Sbjct: 121 EGFDAGLCKSKMEKPRAFPAGDHEYIDVNFGGNR 151

[Close]

BLAST of Cp4.1LG19g08200 vs. NCBI nr
Match: gi|700193858|gb|KGN49062.1| (hypothetical protein Csa_6G511780 [Cucumis sativus])

HSP 1 Score: 157.5 bits (397), Expect = 2.2e-35
Identity = 89/154 (57.79%), Postives = 104/154 (67.53%), Query Frame = 1


Query: 5   MDRFAEIFRHGAEAAVRDTSSGSEHSPENSAADLFDLVKSFMERDDVEINEGEEEDGGKE 64
           MDR A +FRH A+++  +  SGS+HSPE   ADLFDLVKSF+E+ D+E  EGE ED   E
Sbjct: 1   MDRLAALFRHRADSSFSE--SGSDHSPEKPTADLFDLVKSFIEKGDLEFKEGEREDCCTE 60

Query: 65  ESDSFSCDSDAGVIKLRNLFGSRDNKSDEIRIEAEQALKKLVGGRSFQGIKRKLMAHLRR 124
           ESD FS DSDAGV+KLRNLFGS +NK++EIRIE EQALK +                   
Sbjct: 61  ESDGFSFDSDAGVVKLRNLFGSVENKNEEIRIETEQALKLV------------------- 120

Query: 125 KGFDAGLCKSKGEKLHSFPAGDHEYIDVNFSGNR 159
                GLCKSK EK  +FPAGDHEYIDVNF GNR
Sbjct: 121 -----GLCKSKMEKPRAFPAGDHEYIDVNFGGNR 128

[Close]

BLAST of Cp4.1LG19g08200 vs. NCBI nr
Match: gi|719989340|ref|XP_010252609.1| (PREDICTED: uncharacterized protein LOC104594140 [Nelumbo nucifera])

HSP 1 Score: 112.8 bits (281), Expect = 6.1e-22
Identity = 78/163 (47.85%), Postives = 96/163 (58.90%), Query Frame = 1


Query: 1   MPNKMDRFAEIFRHGAEAAVRDTSSGSEHSPENSAADLFDLVKSFMERDDVEINEGEEED 60
           +P +  R A  F   A A + D SSGSEHS ENSA DL DL+ SFME DD    E +EE 
Sbjct: 4   IPVRFKRVAAAFDDLARARLCD-SSGSEHSAENSA-DLSDLIDSFMETDDRVDGEEDEEQ 63

Query: 61  GGKEESDSFSCDSDAGVIKLRNLFGSRDNKSDE-----IRIEAEQALKKLVGGRSFQGIK 120
             + E   F  D++   I L+ L G   +  DE     IR E E A + L G R  +G K
Sbjct: 64  AHENEKSGFQSDTETKDI-LQGLLGCDSSDGDEQVKRTIRKEVELACRVL-GTRPSEGFK 123

Query: 121 RKLMAHLRRKGFDAGLCKSKGEKLHSFPAGDHEYIDVNFSGNR 159
           R+LM  LR +G DAGLCKS+ EK+  FPAGD+EYIDV F+G R
Sbjct: 124 RQLMCRLRERGLDAGLCKSRWEKIGRFPAGDYEYIDVIFAGTR 162

[Close]

BLAST of Cp4.1LG19g08200 vs. NCBI nr
Match: gi|922364340|ref|XP_003610505.2| (DUF506 family protein [Medicago truncatula])

HSP 1 Score: 111.7 bits (278), Expect = 1.4e-21
Identity = 73/159 (45.91%), Postives = 98/159 (61.64%), Query Frame = 1


Query: 1   MPNKMDRFAEIFRHGAEAAVR-DTSSGSEHSPENSAADLFDLVKSFMERDDVEINEGEEE 60
           +P + +R A  F     A VR   SSGSEHSPE+S  DL DLVKSF+E++ V   E +  
Sbjct: 5   IPVRFERVAAAFESDEVARVRLCESSGSEHSPESST-DLSDLVKSFLEKNSVRAEE-DAV 64

Query: 61  DGGKEESDSFSCDSDAGVIKLRNLFGSRDNKSDEIRIEAEQALKKLVGGRSFQGIKRKLM 120
              KE+ D    D +     L+ +F   D   ++IR EAE A++ + G +S  G KR +M
Sbjct: 65  AFDKEDRDFEWYDYEEKREILKEIFN--DTVKEKIRREAELAIEVVGGDKSSPGFKRMVM 124

Query: 121 AHLRRKGFDAGLCKSKGEKLHSFPAGDHEYIDVNFSGNR 159
           + LR +GFDAGLCKSK E+   FP+GD+EYIDVN+ GNR
Sbjct: 125 SRLRERGFDAGLCKSKWERNRKFPSGDYEYIDVNYGGNR 159

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g08200 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG19g08200 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL43_CUCSA	1.5e-35	57.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511780 PE=4 SV=1	[more]
G7JKH5_MEDTR	9.5e-22	45.91	DUF506 family protein OS=Medicago truncatula GN=MTR_4g132940 PE=4 SV=2	[more]
A0A067JA80_JATCU	8.9e-20	40.24	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21147 PE=4 SV=1	[more]
G7JKH8_MEDTR	3.4e-19	40.70	DUF506 family protein OS=Medicago truncatula GN=MTR_4g132970 PE=4 SV=1	[more]
A0A061FV12_THECC	4.4e-19	45.18	Uncharacterized protein OS=Theobroma cacao GN=TCM_012425 PE=4 SV=1	[more]

BLAST of Cp4.1LG19g08200 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G12030.1	5.0e-14	42.31	Protein of unknown function (DUF506)	[more]
AT1G62420.1	5.1e-11	37.01	Protein of unknown function (DUF506)	[more]

BLAST of Cp4.1LG19g08200 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079073\|ref\|XP_008440059.1\|	7.4e-52	72.73	PREDICTED: uncharacterized protein LOC103484651 [Cucumis melo]	[more]
gi\|449434012\|ref\|XP_004134790.1\|	6.9e-50	70.78	PREDICTED: uncharacterized protein LOC101205314 [Cucumis sativus]	[more]
gi\|700193858\|gb\|KGN49062.1\|	2.2e-35	57.79	hypothetical protein Csa_6G511780 [Cucumis sativus]	[more]
gi\|719989340\|ref\|XP_010252609.1\|	6.1e-22	47.85	PREDICTED: uncharacterized protein LOC104594140 [Nelumbo nucifera]	[more]
gi\|922364340\|ref\|XP_003610505.2\|	1.4e-21	45.91	DUF506 family protein [Medicago truncatula]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006502	PDDEXK-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g08200.1	Cp4.1LG19g08200.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006502	Protein of unknown function PDDEXK-like	PANTHER	PTHR31579	FAMILY NOT NAMED	coord: 24..154 score: 2.0
IPR006502	Protein of unknown function PDDEXK-like	PFAM	PF04720	PDDEXK_6	coord: 40..160 score: 9.5
None	No IPR available	PANTHER	PTHR31579:SF15	F2401.16	coord: 24..154 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG19g08200	Cucsa.044820	Cucumber (Gy14) v1	cgycpeB0039
Cp4.1LG19g08200	CmaCh07G003410	Cucurbita maxima (Rimu)	cmacpeB880
Cp4.1LG19g08200	CmoCh07G003330	Cucurbita moschata (Rifu)	cmocpeB817
Cp4.1LG19g08200	Cla014410	Watermelon (97103) v1	cpewmB482
Cp4.1LG19g08200	Csa6G511780	Cucumber (Chinese Long) v2	cpecuB503
Cp4.1LG19g08200	MELO3C007430	Melon (DHL92) v3.5.1	cpemeB457
Cp4.1LG19g08200	ClCG01G021530	Watermelon (Charleston Gray)	cpewcgB425
Cp4.1LG19g08200	CSPI06G33100	Wild cucumber (PI 183967)	cpecpiB503
Cp4.1LG19g08200	Lsi01G004710	Bottle gourd (USVL1VR-Ls)	cpelsiB396
Cp4.1LG19g08200	MELO3C007430.2	Melon (DHL92) v3.6.1	cpemedB540
Cp4.1LG19g08200	CsaV3_6G048560	Cucumber (Chinese Long) v3	cpecucB0618
Cp4.1LG19g08200	Bhi03G000488	Wax gourd	cpewgoB0607
Cp4.1LG19g08200	CsGy6G032680	Cucumber (Gy14) v2	cgybcpeB810
Cp4.1LG19g08200	Carg07871	Silver-seed gourd	carcpeB0915

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG19g08200	Cucurbita maxima (Rimu)	cmacpeB671
Cp4.1LG19g08200	Cucurbita moschata (Rifu)	cmocpeB624
Cp4.1LG19g08200	Silver-seed gourd	carcpeB0563
Cp4.1LG19g08200	Cucurbita pepo (Zucchini)	cpecpeB076