Cp4.1LG19g07980 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGGCCTGGTGCAAAGATACCGGGCCAAGACTGTCGGCAGCACCGGCCCAGCCGACGCCCCGGAGAAGACACGGAAAAACGTCGGAATGAACACGAACGAACGGTCAATGGAATGAAGGGATTCAGATTCGGGGAGGAAAAGTTGAAGAAAGTTATATAAACCAATCTTGAAAGATTTAACTATTTTAAACTCGGAGTTCCAATTAAAGGAAGTAGCAGCTGGTCTTCGTCCCTTTCTTCCTTTGAAGGCGAAAGTCAGATTATCGGCCATTGAAATTGATCCCCGCTTCCCGAAGACATCTGAGAATGAACATCAAAGTCATCTACACCAGCTAAGACGGTTCGTTTTCTCTCTACCCTCGTCAATGGAATTTAGAGCGTACAATGTTTTCTTATTTCTTCGGCTATTGATTGATTTTGTGTTTTTCATTTCCGTTTTTCCCTCTTGGATTCAAATACTCAAAAGTAGCAAGAACTGGGAAGGGTGAATCCTTGATTGCGTTTGTTTTTGGATTTGATTCTGAATATAAACGTTCGGTTGTGGCAACCGTTCAAGAATCCTGATAGATCTTGTTGTTTATGTGATTTATTGTAGTCTACCGATAAACAGGGGGAATGGAATGTGTAATCTGGGATCTGCTTCTTCTTGTTCTACGTTTTGGGTTGTGAGTGCATTAATGACTTGGATGATTCTTTGTTTTGAAGGCTATGAGATTCCGTTTTGGCATAGATTACTGTTGATTAGAGCCATATTAGGATTTAGGACGATGTAATCTTGAATGGACATAATTGAGGTTTGTATATTTTTGATAGTATCTGAATCTGATAGAGCCTGATGAACCAACATATTCCATCTACAGGCGGTAGGTTTAGTATTTGATGATTATCTCAACCTTCTACTCCAGGCTATTTTGCTGAATATTAGCGATATCGAGGGCGAGGTGGTCGAGGATGGCTGATGGAATATCAAGTTTCTGGGGTCCTGTCACATCTACAATAGAGTGTTGTGAGAAGAATTATGCTTTTTCTTCTTATATTGCCGAGTTTTATAACACAATATCAAACATCCCAACCGTTCTTTTGGCTCTGATCGGTCTTGCAAATGCTTTGAGACAAGGTTTTGAGAAGAGATTTAGTGTACTTCACATATCAAATATGATACTGGCCATTGGCAGCATGTTCTATCATGCCACATTGCAAAAAGTGTAAGTTCTAATGGCATGCTTTTGGTGTTCTTGTTGCAGTTCTTTCCATTTAGATATTTGAATGCTGTGTTCTTGAATGTTTGTTCATTACTGAGCTTTAACAACCAACGATCAACTCTTTGTTTTCTAACCAGGCAACAGCAAGGGGATGAAACACCAATGATCTGGGAAATGCTTCTTTACATGTATATTCTCTATTCACCAGATTGGCATTACCGAAGTACGATGCCAACATTCCTCTTCCTATATGGGGCCATTTTCGCTGTGGCTCACTCAATTCTTCGTTATGACATCGGTTTCAAGCTGCACTATGTGATTCTTTGTCTCCTCTGCATACCTCGAATGTATAAGTATTATATATACACAGAAGATTCCTCGGCTAAGCGGTTAGCGAGGCTGTACTTGCTGACTCTTCTCTTAGGCATTTTCTGTTGGGTAATCGATCGGTGTTTCTGTGATAAGATATCACATTGGAGCATCAATCCTCAAGGTCATGCCCTGTGGCATGGTTTCATGGGTTTGAGTTCCTACTTTGCTAACACATTCTTAATGTTTTGCCGGGCGCAGCAAAGAGGATGGGCACCAAAAGTTCTTCATTTAATGGGAATTCTCCCCTACGTGAAGATTGAAAAACCAAAAACCCAGTAAGAAGACACGAATTTGAAGACAAATTATGACAATTTTTGACCTGTGTTGAGTGTACCCTGGAGGTAGAGAAGAAAAAAAATGCAATCTTTTGGGCTATGTTCCTTCTTTTCCTTCTTTTCACTGTAAGGAATGAATAGAAACTTAGATTTTTGTAGTACAAATAACAGCAGTTACGTATTTTTGTTCATTGACGTCAGGGCTTTATTCGTTACAGAGTGACTTAGCATTTAACTCTTTCACAGAGCTGAAGCGCAACATCTGTAAAATATTGCAGTATGTTCAATCTATTTTACTCCCTGTAGTTTTC TGGGCCTGGTGCAAAGATACCGGGCCAAGACTGTCGGCAGCACCGGCCCAGCCGACGCCCCGGAGAAGACACGGAAAAACGTCGGAATGAACACGAACGAACGGTCAATGGAATGAAGGGATTCAGATTCGGGGAGGAAAAGTTGAAGAAAGTTATATAAACCAATCTTGAAAGATTTAACTATTTTAAACTCGGAGTTCCAATTAAAGGAAGTAGCAGCTGGTCTTCGTCCCTTTCTTCCTTTGAAGGCGAAAGTCAGATTATCGGCCATTGAAATTGATCCCCGCTTCCCGAAGACATCTGAGAATGAACATCAAAGTCATCTACACCAGCTAAGACGGCGGTAGGTTTAGTATTTGATGATTATCTCAACCTTCTACTCCAGGCTATTTTGCTGAATATTAGCGATATCGAGGGCGAGGTGGTCGAGGATGGCTGATGGAATATCAAGTTTCTGGGGTCCTGTCACATCTACAATAGAGTGTTGTGAGAAGAATTATGCTTTTTCTTCTTATATTGCCGAGTTTTATAACACAATATCAAACATCCCAACCGTTCTTTTGGCTCTGATCGGTCTTGCAAATGCTTTGAGACAAGGTTTTGAGAAGAGATTTAGTGTACTTCACATATCAAATATGATACTGGCCATTGGCAGCATGTTCTATCATGCCACATTGCAAAAAGTGCAACAGCAAGGGGATGAAACACCAATGATCTGGGAAATGCTTCTTTACATGTATATTCTCTATTCACCAGATTGGCATTACCGAAGTACGATGCCAACATTCCTCTTCCTATATGGGGCCATTTTCGCTGTGGCTCACTCAATTCTTCGTTATGACATCGGTTTCAAGCTGCACTATGTGATTCTTTGTCTCCTCTGCATACCTCGAATGTATAAGTATTATATATACACAGAAGATTCCTCGGCTAAGCGGTTAGCGAGGCTGTACTTGCTGACTCTTCTCTTAGGCATTTTCTGTTGGGTAATCGATCGGTGTTTCTGTGATAAGATATCACATTGGAGCATCAATCCTCAAGGTCATGCCCTGTGGCATGGTTTCATGGGTTTGAGTTCCTACTTTGCTAACACATTCTTAATGTTTTGCCGGGCGCAGCAAAGAGGATGGGCACCAAAAGTTCTTCATTTAATGGGAATTCTCCCCTACGTGAAGATTGAAAAACCAAAAACCCAGTAAGAAGACACGAATTTGAAGACAAATTATGACAATTTTTGACCTGTGTTGAGTGTACCCTGGAGGTAGAGAAGAAAAAAAATGCAATCTTTTGGGCTATGTTCCTTCTTTTCCTTCTTTTCACTGTAAGGAATGAATAGAAACTTAGATTTTTGTAGTACAAATAACAGCAGTTACGTATTTTTGTTCATTGACGTCAGGGCTTTATTCGTTACAGAGTGACTTAGCATTTAACTCTTTCACAGAGCTGAAGCGCAACATCTGTAAAATATTGCAGTATGTTCAATCTATTTTACTCCCTGTAGTTTTC ATGGCTGATGGAATATCAAGTTTCTGGGGTCCTGTCACATCTACAATAGAGTGTTGTGAGAAGAATTATGCTTTTTCTTCTTATATTGCCGAGTTTTATAACACAATATCAAACATCCCAACCGTTCTTTTGGCTCTGATCGGTCTTGCAAATGCTTTGAGACAAGGTTTTGAGAAGAGATTTAGTGTACTTCACATATCAAATATGATACTGGCCATTGGCAGCATGTTCTATCATGCCACATTGCAAAAAGTGCAACAGCAAGGGGATGAAACACCAATGATCTGGGAAATGCTTCTTTACATGTATATTCTCTATTCACCAGATTGGCATTACCGAAGTACGATGCCAACATTCCTCTTCCTATATGGGGCCATTTTCGCTGTGGCTCACTCAATTCTTCGTTATGACATCGGTTTCAAGCTGCACTATGTGATTCTTTGTCTCCTCTGCATACCTCGAATGTATAAGTATTATATATACACAGAAGATTCCTCGGCTAAGCGGTTAGCGAGGCTGTACTTGCTGACTCTTCTCTTAGGCATTTTCTGTTGGGTAATCGATCGGTGTTTCTGTGATAAGATATCACATTGGAGCATCAATCCTCAAGGTCATGCCCTGTGGCATGGTTTCATGGGTTTGAGTTCCTACTTTGCTAACACATTCTTAATGTTTTGCCGGGCGCAGCAAAGAGGATGGGCACCAAAAGTTCTTCATTTAATGGGAATTCTCCCCTACGTGAAGATTGAAAAACCAAAAACCCAGTAA MADGISSFWGPVTSTIECCEKNYAFSSYIAEFYNTISNIPTVLLALIGLANALRQGFEKRFSVLHISNMILAIGSMFYHATLQKVQQQGDETPMIWEMLLYMYILYSPDWHYRSTMPTFLFLYGAIFAVAHSILRYDIGFKLHYVILCLLCIPRMYKYYIYTEDSSAKRLARLYLLTLLLGIFCWVIDRCFCDKISHWSINPQGHALWHGFMGLSSYFANTFLMFCRAQQRGWAPKVLHLMGILPYVKIEKPKTQ
BLAST of Cp4.1LG19g07980 vs. Swiss-Prot
Match: ACER3_HUMAN (Alkaline ceramidase 3 OS=Homo sapiens GN=ACER3 PE=1 SV=3) HSP 1 Score: 125.9 bits (315), Expect = 6.1e-28 Identity = 78/258 (30.23%), Postives = 127/258 (49.22%), Query Frame = 1
BLAST of Cp4.1LG19g07980 vs. Swiss-Prot
Match: ACER3_MOUSE (Alkaline ceramidase 3 OS=Mus musculus GN=Acer3 PE=2 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 6.1e-28 Identity = 77/258 (29.84%), Postives = 124/258 (48.06%), Query Frame = 1
BLAST of Cp4.1LG19g07980 vs. Swiss-Prot
Match: DCD3A_DICDI (Putative alkaline ceramidase dcd3A OS=Dictyostelium discoideum GN=dcd3A PE=2 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.3e-19 Identity = 74/273 (27.11%), Postives = 122/273 (44.69%), Query Frame = 1
BLAST of Cp4.1LG19g07980 vs. Swiss-Prot
Match: ACASE_DROME (Alkaline ceramidase OS=Drosophila melanogaster GN=bwa PE=2 SV=2) HSP 1 Score: 86.3 bits (212), Expect = 5.4e-16 Identity = 68/219 (31.05%), Postives = 110/219 (50.23%), Query Frame = 1
BLAST of Cp4.1LG19g07980 vs. Swiss-Prot
Match: YPC1_YEAST (Alkaline ceramidase YPC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPC1 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.9e-14 Identity = 70/243 (28.81%), Postives = 107/243 (44.03%), Query Frame = 1
BLAST of Cp4.1LG19g07980 vs. TrEMBL
Match: V4TRC6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016357mg PE=4 SV=1) HSP 1 Score: 457.6 bits (1176), Expect = 9.9e-126 Identity = 208/255 (81.57%), Postives = 238/255 (93.33%), Query Frame = 1
BLAST of Cp4.1LG19g07980 vs. TrEMBL
Match: A0A067GSJ8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025309mg PE=4 SV=1) HSP 1 Score: 456.8 bits (1174), Expect = 1.7e-125 Identity = 208/255 (81.57%), Postives = 237/255 (92.94%), Query Frame = 1
BLAST of Cp4.1LG19g07980 vs. TrEMBL
Match: A0A0D2RDK4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G250600 PE=4 SV=1) HSP 1 Score: 453.8 bits (1166), Expect = 1.4e-124 Identity = 210/255 (82.35%), Postives = 232/255 (90.98%), Query Frame = 1
BLAST of Cp4.1LG19g07980 vs. TrEMBL
Match: B9RXD0_RICCO (Alkaline phytoceramidase, putative OS=Ricinus communis GN=RCOM_0902770 PE=4 SV=1) HSP 1 Score: 452.2 bits (1162), Expect = 4.2e-124 Identity = 209/255 (81.96%), Postives = 231/255 (90.59%), Query Frame = 1
BLAST of Cp4.1LG19g07980 vs. TrEMBL
Match: A0A0B0NRU6_GOSAR (Alkaline ceramidase 3 OS=Gossypium arboreum GN=F383_05172 PE=4 SV=1) HSP 1 Score: 452.2 bits (1162), Expect = 4.2e-124 Identity = 210/255 (82.35%), Postives = 232/255 (90.98%), Query Frame = 1
BLAST of Cp4.1LG19g07980 vs. TAIR10
Match: AT4G22330.1 (AT4G22330.1 Alkaline phytoceramidase (aPHC)) HSP 1 Score: 441.8 bits (1135), Expect = 2.8e-124 Identity = 203/255 (79.61%), Postives = 226/255 (88.63%), Query Frame = 1
BLAST of Cp4.1LG19g07980 vs. NCBI nr
Match: gi|659079075|ref|XP_008440061.1| (PREDICTED: alkaline ceramidase 3 [Cucumis melo]) HSP 1 Score: 497.7 bits (1280), Expect = 1.2e-137 Identity = 235/255 (92.16%), Postives = 246/255 (96.47%), Query Frame = 1
BLAST of Cp4.1LG19g07980 vs. NCBI nr
Match: gi|449434014|ref|XP_004134791.1| (PREDICTED: alkaline ceramidase 3 [Cucumis sativus]) HSP 1 Score: 495.4 bits (1274), Expect = 6.1e-137 Identity = 234/255 (91.76%), Postives = 245/255 (96.08%), Query Frame = 1
BLAST of Cp4.1LG19g07980 vs. NCBI nr
Match: gi|1009107193|ref|XP_015878352.1| (PREDICTED: alkaline ceramidase 3 [Ziziphus jujuba]) HSP 1 Score: 458.4 bits (1178), Expect = 8.3e-126 Identity = 209/255 (81.96%), Postives = 230/255 (90.20%), Query Frame = 1
BLAST of Cp4.1LG19g07980 vs. NCBI nr
Match: gi|567915069|ref|XP_006449848.1| (hypothetical protein CICLE_v10016357mg [Citrus clementina]) HSP 1 Score: 457.6 bits (1176), Expect = 1.4e-125 Identity = 208/255 (81.57%), Postives = 238/255 (93.33%), Query Frame = 1
BLAST of Cp4.1LG19g07980 vs. NCBI nr
Match: gi|470114293|ref|XP_004293350.1| (PREDICTED: alkaline ceramidase 3 [Fragaria vesca subsp. vesca]) HSP 1 Score: 456.8 bits (1174), Expect = 2.4e-125 Identity = 209/255 (81.96%), Postives = 233/255 (91.37%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|