Cp4.1LG19g07660 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCGCGTGGATCGATCATTTTCCCCGCTAATCATGTACGCAAGGACAACAACATTCAATAAAATGCTAAAACGGCCCTTCCGGACCTCAACTCTTCTTCTTTACTTCAATTTATTTCTTCTCCAGTTCCGCTCTCTCTCTCTCTCTCTCTCCAGCTCACCTTCCGCTTCCATCGAAAACGAAGCTAAAAATTGACCCCTCCTCCTCTTAACGGCCACCATAAACTGCCGTGCTCCTGCGTGCCGTGAATTTTCCAAGGCCACCGACGAGTTTTTCACCGTCCGATGCTCTGATTTGAGCTCACTGATGGCTATTGATGATCAAAAGTCAACGTCCGATGGAAAGGTCTGGGGTTTTTTGAAGCAAACGTTTAGGCATTCCGCCAGTGGCACTACTACCTCGTCTCGTACCTCTCATCAGCCTCATCCACCCATGGAGGGGACGAATCCTCACACCTCCGCCTCTGTCTCCTCCGTTGCTAGGTCGCTGCTCCCGACGCGGCGCCGGCTCAAGCTCGATCCATCGAATAAACTTTTCTTTCCTTGTGAGTTCTTTCATTCGTTTTATTGATTTTTGTTGGATTTTTTCTGCTTATTCTCGGTCTAGTTCGTATGATCTCGATCTGTTGTCGACAATTAACTATCTGCTGCATTTCGGTTTTAAGTCGTTTGAATTCTCTAATTGAATCTATTTTCTGGTTGATTTTAGTTTTAATTGATTCACCTTTGTATCTTTGAAGATGAACCTGGCAAGCAGGCCAGGAGTGCTATTGGAATAAAAAACACGAGCAAATCTTTTGTTGCTTTCAAGGTAAAGAACGTCCTAAATTCCTATTTTAGGCATTTAACTTTGCATTTTAGTATCCATATTTCAACCATACAGGTCTTGTATTTTACAATTTGGTTGATCAGTGGACAGTGGGTTCGTATGCTAGTAGTAATAGTTATAATTTCCAAAATAGCTCTCTTCCTAATATTGTCTGTAAAATCCGGCTTATAGTGATTGTTGATTCATTGTGTTTTAACTCTCATATAGTTCCAAACGACTGCACCAAAAAGCTGCTTCATGCGTCCTCCTGGTGCCATTCTTGCCCCTGGAGAGAGCATCATAGCCACTGGTAAACTATTTTCCTGGATTTCATATCCATTTTGTCTCTGTTCCTAGGTTGATATATAACAGCTATGATTATTAAGTTTACTTGGTTCCTAATTTTATTCTTCTTGAAATTGGCATAATTTTATGTTTCTTATAAACATTCATTTTCTAATTGCTGTCGATGTTGGATGGATCTTCTAGTTTTCAAGTTTGTTGAGGTTCCTGAAAATAACGAGAAGCCAATGGATCAAAAGAACAACAGGGTTAAGTTTAAAATTATGAGCTTGAAGGTGAAAGGACGAATGGATTATGTGCCTGAGCTGGTGCGTCTTACCTTTTCCTTTGCTTGGTATTTCCAGTTATTTACGTTTTGATGAATCTTTTGTTCAATAAGTTGATCTTAGTTTTAATGCTACAAGTGTTGTTTCACTTTAGAGAGGAAATGGCTTTATCAATATCTTAATGAATTTTTTAGTTGATATCTGTCAAAACTAGAGGACTATGTTGTTTATCAGTGGGCCAGGACTAGATGTCGTTTCAGTTAATTAGTGGCCACAATGAACAAGTATAGATTCTGCATGAGTTTCCAAAAATTTTGGTTGATCACTTGATGATAGGGAAACTTTTGTTGTATGGCCTCCTTATTGATATATTCATCACATACAGTCGCTGGCATTCTATTGCATGCTTTAGTTTTGTTTGTAAAGAGTTCTGACAAATATATCTATATATATTTTTTCTTTCTGGTTAGAGCTTGTAGCGAATAGTTCATTAATTCCTTTTCTGGTTGGGACTATTAGTTAAAAATTTTGGTCTTCTCTTTGTGTTCTCAATCAAAAAGAATTTAGACTTCTCTATGTTTCTCATTAAAAAAATGTTAGTCTTCTCTTGGATGGTGTGAATCCTTCTTCCCTACTTTTACAGATTAGTTTAAGTGACCTTATAATAAACTGGGCCTTATCTGTAACCCCAATTTGTGGCTTCCCCCCGGGTCTATTTTATTTACAAGAAAAAAGAGGGTCTTGCTCCTAATTCTTTTAAACAACTTCCAACTTATGAATGCCCCTTCGTTCACTCGTTGCTTGTTTTAAGATGGCCTTTTAACATACCATTTATCTCGAGTTTATTGCCTTTTCATGTTGGGCTAAAAAAAGCAGGTAAAATGAGTACTGATAAAACCTTATTATTTTTGCCTCTTGATCTAGTTTGATGAGCAGAAGGACCAAGTTGCTATAGAACAGATATTGCGGGTTGTTTTCCTGGATCCAGAACGTCCTAATGCAGTAAGTTTATTCATCAATAATCAGAATTTCACTATTCCTCCAAATAGAATCAAGAAGTATGAGAAATGATTTTAAATTAATTGATTTGAAATATTGAAAAGCATTCTACTCTTTTTTTTTTTTTTTTTTTTTTCTTGTTTAGAATGAGAGAGATTTTGGAAAGAATATTTTTAATCTGAACTTATAAACCAAAAATTGAATTATGGAAAGAATATTTTTAATCTGAACTTATAAACCAAAAATTGAATTATCATAAGGTTAAAACGTAGTAGTTTAGTTTGAAATCCTGTGAATTAGACGCCTAACGCGCAACCCCCTCCTTTTGTTATTCTCTTTAAGGCCTTAGAAAAATTGAAGCGACAATTAGCCGAAGCCGATGCTGCACTTGAGGCACGCAAGAAACCACCAGAAGAAGCAGGCCCAAAAATCATCGGAGAAGGGCTCGTGATAGATGAATGGGTGAGTTGTGTTCTTTTATTTATCCTTCTCATGCGAATCTTCTAAAACTTTGAGTCTAATGAGTCGCACTCTTCATGTACTTCCATTTTGTGTTTTTTTTTTCCCAGAAAGAACGGCGGGAAAGATATCTGGCAAAGCAGCAAGTTGAAGGGGTAGACTCTGTATAGGTTTGGTTTCAGTTTTCCGGCAATGGTTCTGTAATTTGAAAGGAATTTCGAAATGAACTGTGATTCGAGTATCAATTCTACCCTTAAAAAAGGTTGTGTAATCTTTTCTTCGTATATTGTCGAAAATGTTGTTTAGGTGAACATATTTTTATTTTCATTGAAAGAAAACCCCCTGAGGAGAAGTCTTGTGTAATTTGAGACACCCAATGGGATTACACTTTTATATGTAGATATAGATAAATATCGTTCATTGATTTCTCTCTGGCTGATAAAATGGCCACAGAGGAATGTAATGCAATGTATCAAAGTAATTCATTTCATTTCA AGCGCGTGGATCGATCATTTTCCCCGCTAATCATGTACGCAAGGACAACAACATTCAATAAAATGCTAAAACGGCCCTTCCGGACCTCAACTCTTCTTCTTTACTTCAATTTATTTCTTCTCCAGTTCCGCTCTCTCTCTCTCTCTCTCTCCAGCTCACCTTCCGCTTCCATCGAAAACGAAGCTAAAAATTGACCCCTCCTCCTCTTAACGGCCACCATAAACTGCCGTGCTCCTGCGTGCCGTGAATTTTCCAAGGCCACCGACGAGTTTTTCACCGTCCGATGCTCTGATTTGAGCTCACTGATGGCTATTGATGATCAAAAGTCAACGTCCGATGGAAAGGTCTGGGGTTTTTTGAAGCAAACGTTTAGGCATTCCGCCAGTGGCACTACTACCTCGTCTCGTACCTCTCATCAGCCTCATCCACCCATGGAGGGGACGAATCCTCACACCTCCGCCTCTGTCTCCTCCGTTGCTAGGTCGCTGCTCCCGACGCGGCGCCGGCTCAAGCTCGATCCATCGAATAAACTTTTCTTTCCTTATGAACCTGGCAAGCAGGCCAGGAGTGCTATTGGAATAAAAAACACGAGCAAATCTTTTGTTGCTTTCAAGTTCCAAACGACTGCACCAAAAAGCTGCTTCATGCGTCCTCCTGGTGCCATTCTTGCCCCTGGAGAGAGCATCATAGCCACTGTTTTCAAGTTTGTTGAGGTTCCTGAAAATAACGAGAAGCCAATGGATCAAAAGAACAACAGGGTTAAGTTTAAAATTATGAGCTTGAAGGTGAAAGGACGAATGGATTATGTGCCTGAGCTGTTTGATGAGCAGAAGGACCAAGTTGCTATAGAACAGATATTGCGGGTTGTTTTCCTGGATCCAGAACGTCCTAATGCAACGCCTAACGCGCAACCCCCTCCTTTTGTTATTCTCTTTAAGGCCTTAGAAAAATTGAAGCGACAATTAGCCGAAGCCGATGCTGCACTTGAGGCACGCAAGAAACCACCAGAAGAAGCAGGCCCAAAAATCATCGGAGAAGGGCTCGTGATAGATGAATGGAAAGAACGGCGGGAAAGATATCTGGCAAAGCAGCAAGTTGAAGGGGTAGACTCTGTATAGGTTTGGTTTCAGTTTTCCGGCAATGGTTCTGTAATTTGAAAGGAATTTCGAAATGAACTGTGATTCGAGTATCAATTCTACCCTTAAAAAAGGTTGTGTAATCTTTTCTTCGTATATTGTCGAAAATGTTGTTTAGGTGAACATATTTTTATTTTCATTGAAAGAAAACCCCCTGAGGAGAAGTCTTGTGTAATTTGAGACACCCAATGGGATTACACTTTTATATGTAGATATAGATAAATATCGTTCATTGATTTCTCTCTGGCTGATAAAATGGCCACAGAGGAATGTAATGCAATGTATCAAAGTAATTCATTTCATTTCA ATGGCTATTGATGATCAAAAGTCAACGTCCGATGGAAAGGTCTGGGGTTTTTTGAAGCAAACGTTTAGGCATTCCGCCAGTGGCACTACTACCTCGTCTCGTACCTCTCATCAGCCTCATCCACCCATGGAGGGGACGAATCCTCACACCTCCGCCTCTGTCTCCTCCGTTGCTAGGTCGCTGCTCCCGACGCGGCGCCGGCTCAAGCTCGATCCATCGAATAAACTTTTCTTTCCTTATGAACCTGGCAAGCAGGCCAGGAGTGCTATTGGAATAAAAAACACGAGCAAATCTTTTGTTGCTTTCAAGTTCCAAACGACTGCACCAAAAAGCTGCTTCATGCGTCCTCCTGGTGCCATTCTTGCCCCTGGAGAGAGCATCATAGCCACTGTTTTCAAGTTTGTTGAGGTTCCTGAAAATAACGAGAAGCCAATGGATCAAAAGAACAACAGGGTTAAGTTTAAAATTATGAGCTTGAAGGTGAAAGGACGAATGGATTATGTGCCTGAGCTGTTTGATGAGCAGAAGGACCAAGTTGCTATAGAACAGATATTGCGGGTTGTTTTCCTGGATCCAGAACGTCCTAATGCAACGCCTAACGCGCAACCCCCTCCTTTTGTTATTCTCTTTAAGGCCTTAGAAAAATTGAAGCGACAATTAGCCGAAGCCGATGCTGCACTTGAGGCACGCAAGAAACCACCAGAAGAAGCAGGCCCAAAAATCATCGGAGAAGGGCTCGTGATAGATGAATGGAAAGAACGGCGGGAAAGATATCTGGCAAAGCAGCAAGTTGAAGGGGTAGACTCTGTATAG MAIDDQKSTSDGKVWGFLKQTFRHSASGTTTSSRTSHQPHPPMEGTNPHTSASVSSVARSLLPTRRRLKLDPSNKLFFPYEPGKQARSAIGIKNTSKSFVAFKFQTTAPKSCFMRPPGAILAPGESIIATVFKFVEVPENNEKPMDQKNNRVKFKIMSLKVKGRMDYVPELFDEQKDQVAIEQILRVVFLDPERPNATPNAQPPPFVILFKALEKLKRQLAEADAALEARKKPPEEAGPKIIGEGLVIDEWKERRERYLAKQQVEGVDSV
BLAST of Cp4.1LG19g07660 vs. Swiss-Prot
Match: VAP42_ARATH (Vesicle-associated protein 4-2 OS=Arabidopsis thaliana GN=PVA42 PE=1 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 1.5e-96 Identity = 204/310 (65.81%), Postives = 223/310 (71.94%), Query Frame = 1
BLAST of Cp4.1LG19g07660 vs. Swiss-Prot
Match: VAP43_ARATH (Vesicle-associated protein 4-3 OS=Arabidopsis thaliana GN=PVA43 PE=2 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 9.2e-83 Identity = 189/302 (62.58%), Postives = 212/302 (70.20%), Query Frame = 1
BLAST of Cp4.1LG19g07660 vs. Swiss-Prot
Match: VAP41_ARATH (Vesicle-associated protein 4-1 OS=Arabidopsis thaliana GN=PVA41 PE=2 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 1.6e-82 Identity = 163/253 (64.43%), Postives = 198/253 (78.26%), Query Frame = 1
BLAST of Cp4.1LG19g07660 vs. TrEMBL
Match: A0A0A0KN70_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G516890 PE=4 SV=1) HSP 1 Score: 471.5 bits (1212), Expect = 7.0e-130 Identity = 241/270 (89.26%), Postives = 251/270 (92.96%), Query Frame = 1
BLAST of Cp4.1LG19g07660 vs. TrEMBL
Match: A5BGT0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011094 PE=4 SV=1) HSP 1 Score: 390.2 bits (1001), Expect = 2.1e-105 Identity = 209/279 (74.91%), Postives = 232/279 (83.15%), Query Frame = 1
BLAST of Cp4.1LG19g07660 vs. TrEMBL
Match: M5WIG8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010151mg PE=4 SV=1) HSP 1 Score: 387.1 bits (993), Expect = 1.7e-104 Identity = 212/276 (76.81%), Postives = 229/276 (82.97%), Query Frame = 1
BLAST of Cp4.1LG19g07660 vs. TrEMBL
Match: D7UDP4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0203g00040 PE=4 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 3.0e-104 Identity = 208/279 (74.55%), Postives = 230/279 (82.44%), Query Frame = 1
BLAST of Cp4.1LG19g07660 vs. TrEMBL
Match: A0A0B0MSH4_GOSAR (Vesicle-associated 4-2-like protein OS=Gossypium arboreum GN=F383_30680 PE=4 SV=1) HSP 1 Score: 384.4 bits (986), Expect = 1.1e-103 Identity = 205/271 (75.65%), Postives = 232/271 (85.61%), Query Frame = 1
BLAST of Cp4.1LG19g07660 vs. TAIR10
Match: AT4G21450.3 (AT4G21450.3 PapD-like superfamily protein) HSP 1 Score: 340.5 bits (872), Expect = 9.5e-94 Identity = 203/329 (61.70%), Postives = 223/329 (67.78%), Query Frame = 1
BLAST of Cp4.1LG19g07660 vs. TAIR10
Match: AT4G05060.1 (AT4G05060.1 PapD-like superfamily protein) HSP 1 Score: 308.1 bits (788), Expect = 5.2e-84 Identity = 189/302 (62.58%), Postives = 212/302 (70.20%), Query Frame = 1
BLAST of Cp4.1LG19g07660 vs. TAIR10
Match: AT5G54110.1 (AT5G54110.1 membrane-associated mannitol-induced) HSP 1 Score: 307.4 bits (786), Expect = 8.9e-84 Identity = 163/253 (64.43%), Postives = 198/253 (78.26%), Query Frame = 1
BLAST of Cp4.1LG19g07660 vs. TAIR10
Match: AT4G00170.1 (AT4G00170.1 Plant VAMP (vesicle-associated membrane protein) family protein) HSP 1 Score: 50.1 bits (118), Expect = 2.6e-06 Identity = 36/129 (27.91%), Postives = 67/129 (51.94%), Query Frame = 1
BLAST of Cp4.1LG19g07660 vs. TAIR10
Match: AT2G45140.1 (AT2G45140.1 plant VAP homolog 12) HSP 1 Score: 49.3 bits (116), Expect = 4.4e-06 Identity = 37/130 (28.46%), Postives = 65/130 (50.00%), Query Frame = 1
BLAST of Cp4.1LG19g07660 vs. NCBI nr
Match: gi|659078806|ref|XP_008439916.1| (PREDICTED: vesicle-associated protein 4-2 [Cucumis melo]) HSP 1 Score: 471.9 bits (1213), Expect = 7.7e-130 Identity = 241/270 (89.26%), Postives = 252/270 (93.33%), Query Frame = 1
BLAST of Cp4.1LG19g07660 vs. NCBI nr
Match: gi|778720670|ref|XP_004134732.2| (PREDICTED: vesicle-associated protein 4-2 [Cucumis sativus]) HSP 1 Score: 471.5 bits (1212), Expect = 1.0e-129 Identity = 241/270 (89.26%), Postives = 251/270 (92.96%), Query Frame = 1
BLAST of Cp4.1LG19g07660 vs. NCBI nr
Match: gi|823237693|ref|XP_012451490.1| (PREDICTED: vesicle-associated protein 4-2-like [Gossypium raimondii]) HSP 1 Score: 390.6 bits (1002), Expect = 2.3e-105 Identity = 208/271 (76.75%), Postives = 233/271 (85.98%), Query Frame = 1
BLAST of Cp4.1LG19g07660 vs. NCBI nr
Match: gi|147801604|emb|CAN74544.1| (hypothetical protein VITISV_011094 [Vitis vinifera]) HSP 1 Score: 390.2 bits (1001), Expect = 2.9e-105 Identity = 209/279 (74.91%), Postives = 232/279 (83.15%), Query Frame = 1
BLAST of Cp4.1LG19g07660 vs. NCBI nr
Match: gi|595865000|ref|XP_007211872.1| (hypothetical protein PRUPE_ppa010151mg [Prunus persica]) HSP 1 Score: 387.1 bits (993), Expect = 2.5e-104 Identity = 212/276 (76.81%), Postives = 229/276 (82.97%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|