Cp4.1LG19g06270 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG19g06270
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionWRKY transcription factor, putative
LocationCp4.1LG19 : 7539284 .. 7540476 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGAGGAGTGATCCCAAAACCATACTCAACCCACAGCTTCTTCTTCATCTACGTCGTCGTTTTGATCTTCTTCTTCAGCTTCCTTGTGATTCCATGTCAGATGAAATGTTTAGAGATCTATTTTTCTCGAACCCTTTTCGAGACGGTGGGTTCGGGGACTCGGAAACAGCCAGGAATTTTGGGGTGTCGAATGAAATTTCGGGGACTCCGATGAATTCTTGTGGGTCGTTGTCGTCTTCGGATGCTGGAGCTGAGGAAGATGGTTCTGGGAAAGAGAAGGAGAAGGCGATGAAAGACATGGAAGATGGTGGAGAGAGTTCCAAAGCTGCGTATGTGTTCATGTTTTGATTTTAAATTTATGGGGTTTTTTTTTTTTTTTTTNGGGTTTTTTTTTTTTTTTTTTTTGAAATGGAAATTTTTAATGTTTGATTTATAAATAGAGGTAAAGCGAAGAAGAAAGAGCGAGAGCCCAGATTTGCTTTCATGACGAAGACCGAGATCGATCATCTTGAAGATGGATATCGATGGAGAAAATATGGACAGAAGGCCGTCAAGAACAGTATTTTTCCGAGGTAGACGTCTGTTACCGTTTACCATATGAATCATACTTGATTTTTTATTATAGGCAAATATATTGTATTATTGAGTATAGTTAGCCTTCCGGTGTGATTTACTATATAATATTTGACCAGGGATCATAGATTAATATTGGGTATAATTTATTGAATAATTATGAATGGATAATTTGGTTTTATAACAATATTTTTTTAATTTTTTTATTAAATTTTTATATGATTTTGTGTTTTGGTTTTTTCAGGAGCTATTACAGGTGTACAACTCCCAACTGTGGAGTGAAGAAACGTGTAGAAAGATCATTTCAAGATCCATCCATTGTAATCACGACGTACGAAGGACAACACAACCACCCAATTGCGGCAACGCTGAGAGGAAATCTGTCGGCGGCCGCCGCATTTCCACCGTCCATGTTGGCACCAATGTCAGTGGTCGGTGGCGCTGGGTTTCTTCCGAAACCGTTGAGCGACCCTTCCGGCAACAGTCAGGTTGTCGGCGGTGACGGCTACGTTTATTCACAGAGCAGCTTCGGGTATCCTTACAACGAGCAGCAATCGGAATATGGGGTTTTGCAGGACATTTTTCCATCTCCGTCGTCGTTCTTCAACCGGCAGTCGTGA

mRNA sequence

CAGAGGAGTGATCCCAAAACCATACTCAACCCACAGCTTCTTCTTCATCTACGTCGTCGTTTTGATCTTCTTCTTCAGCTTCCTTGTGATTCCATGTCAGATGAAATGTTTAGAGATCTATTTTTCTCGAACCCTTTTCGAGACGGTGGGTTCGGGGACTCGGAAACAGCCAGGAATTTTGGGGTGTCGAATGAAATTTCGGGGACTCCGATGAATTCTTGTGGGTCGTTGTCGTCTTCGGATGCTGGAGCTGAGGAAGATGGTTCTGGGAAAGAGAAGGAGAAGGCGATGAAAGACATGGAAGATGGTGGAGAGAGTTCCAAAGCTGCGAGCTATTACAGGTGTACAACTCCCAACTGTGGAGTGAAGAAACGTGTAGAAAGATCATTTCAAGATCCATCCATTGTAATCACGACGTACGAAGGACAACACAACCACCCAATTGCGGCAACGCTGAGAGGAAATCTGTCGGCGGCCGCCGCATTTCCACCGTCCATGTTGGCACCAATGTCAGTGGTCGGTGGCGCTGGGTTTCTTCCGAAACCGTTGAGCGACCCTTCCGGCAACAGTCAGGTTGTCGGCGGTGACGGCTACGTTTATTCACAGAGCAGCTTCGGGTATCCTTACAACGAGCAGCAATCGGAATATGGGGTTTTGCAGGACATTTTTCCATCTCCGTCGTCGTTCTTCAACCGGCAGTCGTGA

Coding sequence (CDS)

ATGTCAGATGAAATGTTTAGAGATCTATTTTTCTCGAACCCTTTTCGAGACGGTGGGTTCGGGGACTCGGAAACAGCCAGGAATTTTGGGGTGTCGAATGAAATTTCGGGGACTCCGATGAATTCTTGTGGGTCGTTGTCGTCTTCGGATGCTGGAGCTGAGGAAGATGGTTCTGGGAAAGAGAAGGAGAAGGCGATGAAAGACATGGAAGATGGTGGAGAGAGTTCCAAAGCTGCGAGCTATTACAGGTGTACAACTCCCAACTGTGGAGTGAAGAAACGTGTAGAAAGATCATTTCAAGATCCATCCATTGTAATCACGACGTACGAAGGACAACACAACCACCCAATTGCGGCAACGCTGAGAGGAAATCTGTCGGCGGCCGCCGCATTTCCACCGTCCATGTTGGCACCAATGTCAGTGGTCGGTGGCGCTGGGTTTCTTCCGAAACCGTTGAGCGACCCTTCCGGCAACAGTCAGGTTGTCGGCGGTGACGGCTACGTTTATTCACAGAGCAGCTTCGGGTATCCTTACAACGAGCAGCAATCGGAATATGGGGTTTTGCAGGACATTTTTCCATCTCCGTCGTCGTTCTTCAACCGGCAGTCGTGA

Protein sequence

MSDEMFRDLFFSNPFRDGGFGDSETARNFGVSNEISGTPMNSCGSLSSSDAGAEEDGSGKEKEKAMKDMEDGGESSKAASYYRCTTPNCGVKKRVERSFQDPSIVITTYEGQHNHPIAATLRGNLSAAAAFPPSMLAPMSVVGGAGFLPKPLSDPSGNSQVVGGDGYVYSQSSFGYPYNEQQSEYGVLQDIFPSPSSFFNRQS
Homology
[Close]
BLAST of Cp4.1LG19g06270 vs. Swiss-Prot
Match: WRK28_ARATH (Probable WRKY transcription factor 28 OS=Arabidopsis thaliana GN=WRKY28 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.4e-19
Identity = 68/159 (42.77%), Postives = 89/159 (55.97%), Query Frame = 1 

Query: 46  LSSSDAGAEEDGSGKEK--EKAMKDMEDGGESSKAASYYRCTTPNCGVKKRVERSFQDPS 105
           ++ S+    EDG    K  +KA+K+      S    SYYRCTT  C VKKRVERSFQDP+
Sbjct: 163 MTKSEVDHLEDGYRWRKYGQKAVKN------SPYPRSYYRCTTQKCNVKKRVERSFQDPT 222

Query: 106 IVITTYEGQHNHPIAATLRGNLSAAAAFPPSMLAPMSVVGGAGFLPKPLSDPSGNSQVVG 165
           +VITTYEGQHNHPI   LRG+ +AAA F   ++ P S    A  + +  +  +G S    
Sbjct: 223 VVITTYEGQHNHPIPTNLRGSSAAAAMFSADLMTPRSF---AHDMFRTAAYTNGGSVAAA 282

Query: 166 GDGYVYSQSSFG--------YPYNEQQSEYGVLQDIFPS 195
            D Y Y QS +G        +    Q  EY +L++IFPS
Sbjct: 283 LD-YGYGQSGYGSVNSNPSSHQVYHQGGEYELLREIFPS 311

[Close]
BLAST of Cp4.1LG19g06270 vs. Swiss-Prot
Match: WRK71_ARATH (Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.1e-18
Identity = 70/163 (42.94%), Postives = 86/163 (52.76%), Query Frame = 1 

Query: 46  LSSSDAGAEEDGSGKEK--EKAMKDMEDGGESSKAASYYRCTTPNCGVKKRVERSFQDPS 105
           ++ S+    EDG    K  +KA+K+      S    SYYRCTT  C VKKRVERSFQDPS
Sbjct: 127 MTKSEIDHLEDGYRWRKYGQKAVKN------SPYPRSYYRCTTQKCNVKKRVERSFQDPS 186

Query: 106 IVITTYEGQHNHPIAATLRGNLSAAAAFPPSMLAPMSVVGGAGFL----PKPLSD----- 165
           IVITTYEG+HNHPI +TLRG ++A               GG G L    P+   D     
Sbjct: 187 IVITTYEGKHNHPIPSTLRGTVAAEHLLVHR--------GGGGSLLHSFPRHHQDFLMMK 246

Query: 166 -PSGNSQVVGGDGYVYSQSSFGYPYNEQQS--EYGVLQDIFPS 195
               N Q VG   Y +   +  Y +N  Q   +YG+LQDI PS
Sbjct: 247 HSPANYQSVGSLSYEHGHGTSSYNFNNNQPVVDYGLLQDIVPS 275

[Close]
BLAST of Cp4.1LG19g06270 vs. Swiss-Prot
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.7e-12
Identity = 44/82 (53.66%), Postives = 52/82 (63.41%), Query Frame = 1 

Query: 46  LSSSDAGAEEDGSGKEK--EKAMKDMEDGGESSKAASYYRCTTPNCGVKKRVERSFQDPS 105
           L+ SD    +DG    K  +KA+K+      S    SYYRCTT  CGVKKRVERS  DPS
Sbjct: 212 LTKSDIDNLDDGYRWRKYGQKAVKN------SPYPRSYYRCTTVGCGVKKRVERSSDDPS 271

Query: 106 IVITTYEGQHNHPIAATLRGNL 126
           IV+TTYEGQH HP   T RG++
Sbjct: 272 IVMTTYEGQHTHPFPMTPRGHI 287

[Close]
BLAST of Cp4.1LG19g06270 vs. Swiss-Prot
Match: WRKY8_ARATH (Probable WRKY transcription factor 8 OS=Arabidopsis thaliana GN=WRKY8 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.9e-11
Identity = 62/187 (33.16%), Postives = 92/187 (49.20%), Query Frame = 1 

Query: 16  RDGGFGDSETARNFGVSNEISGTPMNSCGSLSSSDAGAEEDGSGKEK--EKAMKDMEDGG 75
           RDGG  D  + +      +           ++ ++    EDG    K  +KA+K+     
Sbjct: 144 RDGGEDDQRSQKVVKTKKKEEKKKEPRVSFMTKTEVDHLEDGYRWRKYGQKAVKN----- 203

Query: 76  ESSKAASYYRCTTPNCGVKKRVERSFQDPSIVITTYEGQHNHPIAATLRGNL---SAAAA 135
            S    SYYRCTT  C VKKRVERS+QDP++VITTYE QHNHPI    R  +   + A+ 
Sbjct: 204 -SPYPRSYYRCTTQKCNVKKRVERSYQDPTVVITTYESQHNHPIPTNRRTAMFSGTTASD 263

Query: 136 FPPS---MLAPMSVVGGAGFLPKPLSDPSGNSQVVGGDGYVYSQSSFGYPYNEQQSEYGV 195
           + PS   + + + +     F    L      S  V      Y Q   G  +++Q+SE+ +
Sbjct: 264 YNPSSSPIFSDLIINTPRSFSNDDLFRVPYASVNVNPS---YHQQQHG--FHQQESEFEL 319

[Close]
BLAST of Cp4.1LG19g06270 vs. Swiss-Prot
Match: WRKY4_ARATH (Probable WRKY transcription factor 4 OS=Arabidopsis thaliana GN=WRKY4 PE=1 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 3.2e-11
Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 1 

Query: 80  SYYRCTTPNCGVKKRVERSFQDPSIVITTYEGQHNHPIAATLRGNLSAAAA 131
           SYY+CTTP CGV+K VER+  DP  V+TTYEG+HNH + A    + +AAAA
Sbjct: 430 SYYKCTTPGCGVRKHVERAATDPKAVVTTYEGKHNHDLPAAKSSSHAAAAA 480

[Close]
BLAST of Cp4.1LG19g06270 vs. TrEMBL
Match: E7CEY1_CUCSA (WRKY protein OS=Cucumis sativus GN=WRKY46 PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.6e-41
Identity = 106/187 (56.68%), Postives = 125/187 (66.84%), Query Frame = 1 

Query: 21  GDSETARNFGVSNEISGTPMNSCGS--LSSSDAGAEEDGSGKEK--EKAMKDMEDGGESS 80
           G+S  A   G S +         G   ++ S+    EDG    K  +KA+K+      S+
Sbjct: 80  GESSKAAGSGKSKKKGEKKEREAGVAFMTKSEVDHLEDGYRWRKYGQKAVKN------SA 139

Query: 81  KAASYYRCTTPNCGVKKRVERSFQDPSIVITTYEGQHNHPIAATLRGNLSAAAA-FPPSM 140
              SYYRCTT  CGVKKRVERS++DPSIVITTYEGQHNH I ATLRGNLSAA+  F PSM
Sbjct: 140 YPRSYYRCTTQKCGVKKRVERSYEDPSIVITTYEGQHNHLIPATLRGNLSAASGTFSPSM 199

Query: 141 LAPMSVVGGAGFLPKPLSDPSGNSQVVGGDGYVYSQSSFGYPYNEQQSEYGVLQDIFPSP 200
           L PM VVGG GFLP  LS  +GN+Q VGG   VYS ++F Y YN +Q EYG+LQDIFP+P
Sbjct: 200 LTPMPVVGGVGFLPAELSSNAGNNQAVGGGATVYSHNNFDYTYNGRQPEYGLLQDIFPAP 259

Query: 201 SSFFNRQ 203
           SSFFNRQ
Sbjct: 260 SSFFNRQ 260

[Close]
BLAST of Cp4.1LG19g06270 vs. TrEMBL
Match: A0A0A0KNS1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G522650 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.3e-40
Identity = 119/261 (45.59%), Postives = 142/261 (54.41%), Query Frame = 1 

Query: 1   MSDEMFRDLFFSN------------------------------------PFRDGGFGDSE 60
           MSDEMF+DLF+S                                        D G G+ +
Sbjct: 1   MSDEMFKDLFYSGMDEYESIVRAFGITSDYSNINNEISGTTAMNSSCSLSSSDAGGGEED 60

Query: 61  TARNFGVSNEISGTPMNSCGSLSSSDAGA---EEDGSGKEKEKAMKDM--------EDG- 120
            +       +IS   +   G  SS  AG+   ++ G  KE+E  +  M        EDG 
Sbjct: 61  DSVK-EKEKQISKDVVEDNGGESSKAAGSGKSKKKGEKKEREARVAFMTKSEVDHLEDGY 120

Query: 121 ----------GESSKAASYYRCTTPNCGVKKRVERSFQDPSIVITTYEGQHNHPIAATLR 180
                       S+   SYYRCTT  CGVKKRVERS++DPSIVITTYEGQHNH I ATLR
Sbjct: 121 RWRKYGQKAVKNSAYPRSYYRCTTQKCGVKKRVERSYEDPSIVITTYEGQHNHLIPATLR 180

Query: 181 GNLSAAAA-FPPSMLAPMSVVGGAGFLPKPLSDPSGNSQVVGGDGYVYSQSSFGYPYNEQ 203
           GNLSAA+  F PSML PM VVGG GFLP  L   +GN+Q VGG   VYS ++F Y YN +
Sbjct: 181 GNLSAASGTFSPSMLTPMPVVGGVGFLPAELLSNAGNNQAVGGGATVYSHNNFDYTYNGR 240

[Close]
BLAST of Cp4.1LG19g06270 vs. TrEMBL
Match: A0A140H8T5_MANES (WRKY transcription factor 81 OS=Manihot esculenta PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 9.0e-21
Identity = 76/155 (49.03%), Postives = 93/155 (60.00%), Query Frame = 1 

Query: 46  LSSSDAGAEEDGSGKEK--EKAMKDMEDGGESSKAASYYRCTTPNCGVKKRVERSFQDPS 105
           ++ S+    EDG    K  +KA+K+      S    SYYRCTT  C VKKRVERSFQDPS
Sbjct: 170 MTKSEVDHLEDGYRWRKYGQKAVKN------SPYPRSYYRCTTQKCTVKKRVERSFQDPS 229

Query: 106 IVITTYEGQHNHPIAATLRGNLSAAAAFPPSMLAPMSVVGGAGFLPKPL---SDPSGNSQ 165
           IVITTYEGQHNH I ATLRGN  AAA F  SML P  +       P+       P   SQ
Sbjct: 230 IVITTYEGQHNHQIPATLRGN--AAAMFSHSMLTPNPLGSTRATFPQDFLAQMAPHIGSQ 289

Query: 166 VVGGDGYVYSQSSFGYPYNEQQ-SEYGVLQDIFPS 195
           +V G G +Y Q+   +P+++ Q  +YG+LQDI PS
Sbjct: 290 LVAGPGSIYPQNQ--HPHHQYQVPDYGLLQDIVPS 314

[Close]
BLAST of Cp4.1LG19g06270 vs. TrEMBL
Match: A0A061GF56_THECC (WRKY DNA-binding protein 28 OS=Theobroma cacao GN=TCM_029543 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.2e-20
Identity = 71/152 (46.71%), Postives = 91/152 (59.87%), Query Frame = 1 

Query: 46  LSSSDAGAEEDGSGKEK--EKAMKDMEDGGESSKAASYYRCTTPNCGVKKRVERSFQDPS 105
           ++ S+    EDG    K  +KA+K+      S    SYYRCTT  C VKKRVERSFQDPS
Sbjct: 154 MTKSEVDHLEDGYRWRKYGQKAVKN------SPYPRSYYRCTTQKCTVKKRVERSFQDPS 213

Query: 106 IVITTYEGQHNHPIAATLRGNLSAAAAFPPSMLAPMSVVGGAGFLPKPLSDPSGNSQVVG 165
           +VITTYEGQHNHP+  TLRG  SAA  FPPSML P  + G +      +  P   +   G
Sbjct: 214 VVITTYEGQHNHPLPTTLRG--SAAGLFPPSMLTPSPLAGPSFPHELFMQMPHHMNNQAG 273

Query: 166 GDGYVYSQSSFGY-PYNEQQSEYGVLQDIFPS 195
             G ++++S   +  Y+ Q  +YG+LQDI PS
Sbjct: 274 SAGSMFAESFSPFQQYHHQVPDYGLLQDIVPS 297

[Close]
BLAST of Cp4.1LG19g06270 vs. TrEMBL
Match: B9S164_RICCO (WRKY transcription factor, putative OS=Ricinus communis GN=RCOM_0634190 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.6e-20
Identity = 76/163 (46.63%), Postives = 94/163 (57.67%), Query Frame = 1 

Query: 46  LSSSDAGAEEDGSGKEK--EKAMKDMEDGGESSKAASYYRCTTPNCGVKKRVERSFQDPS 105
           ++ S+    EDG    K  +KA+K+      S    SYYRCTT  C VKKRVERSFQDPS
Sbjct: 157 MTKSEVDHLEDGYRWRKYGQKAVKN------SPYPRSYYRCTTQKCTVKKRVERSFQDPS 216

Query: 106 IVITTYEGQHNHPIAATLRGNLSAAAAFPPSMLAPMSVVGGAGFLPKPLSDPSGNSQVVG 165
           IVITTYEGQHNHPI ATLRGN  AAA F  SML P + +      P+ +     +     
Sbjct: 217 IVITTYEGQHNHPIPATLRGN--AAAMFSHSMLTPANPMVTRPTFPQEILVQLPHLSNQA 276

Query: 166 GDGYVYSQS----SFGYPYNEQQSEYGVLQDIFPSPSSFFNRQ 203
           G G +Y QS       + Y+ Q  +YG+LQDI   PS FF ++
Sbjct: 277 GTGSIYQQSVNHQHHLHQYHHQVPDYGLLQDIV--PSMFFKQE 309

[Close]
BLAST of Cp4.1LG19g06270 vs. TAIR10
Match: AT4G18170.1 (AT4G18170.1 WRKY DNA-binding protein 28)

HSP 1 Score: 97.8 bits (242), Expect = 8.0e-21
Identity = 68/159 (42.77%), Postives = 89/159 (55.97%), Query Frame = 1 

Query: 46  LSSSDAGAEEDGSGKEK--EKAMKDMEDGGESSKAASYYRCTTPNCGVKKRVERSFQDPS 105
           ++ S+    EDG    K  +KA+K+      S    SYYRCTT  C VKKRVERSFQDP+
Sbjct: 163 MTKSEVDHLEDGYRWRKYGQKAVKN------SPYPRSYYRCTTQKCNVKKRVERSFQDPT 222

Query: 106 IVITTYEGQHNHPIAATLRGNLSAAAAFPPSMLAPMSVVGGAGFLPKPLSDPSGNSQVVG 165
           +VITTYEGQHNHPI   LRG+ +AAA F   ++ P S    A  + +  +  +G S    
Sbjct: 223 VVITTYEGQHNHPIPTNLRGSSAAAAMFSADLMTPRSF---AHDMFRTAAYTNGGSVAAA 282

Query: 166 GDGYVYSQSSFG--------YPYNEQQSEYGVLQDIFPS 195
            D Y Y QS +G        +    Q  EY +L++IFPS
Sbjct: 283 LD-YGYGQSGYGSVNSNPSSHQVYHQGGEYELLREIFPS 311

[Close]
BLAST of Cp4.1LG19g06270 vs. TAIR10
Match: AT1G29860.1 (AT1G29860.1 WRKY DNA-binding protein 71)

HSP 1 Score: 94.0 bits (232), Expect = 1.2e-19
Identity = 70/163 (42.94%), Postives = 86/163 (52.76%), Query Frame = 1 

Query: 46  LSSSDAGAEEDGSGKEK--EKAMKDMEDGGESSKAASYYRCTTPNCGVKKRVERSFQDPS 105
           ++ S+    EDG    K  +KA+K+      S    SYYRCTT  C VKKRVERSFQDPS
Sbjct: 127 MTKSEIDHLEDGYRWRKYGQKAVKN------SPYPRSYYRCTTQKCNVKKRVERSFQDPS 186

Query: 106 IVITTYEGQHNHPIAATLRGNLSAAAAFPPSMLAPMSVVGGAGFL----PKPLSD----- 165
           IVITTYEG+HNHPI +TLRG ++A               GG G L    P+   D     
Sbjct: 187 IVITTYEGKHNHPIPSTLRGTVAAEHLLVHR--------GGGGSLLHSFPRHHQDFLMMK 246

Query: 166 -PSGNSQVVGGDGYVYSQSSFGYPYNEQQS--EYGVLQDIFPS 195
               N Q VG   Y +   +  Y +N  Q   +YG+LQDI PS
Sbjct: 247 HSPANYQSVGSLSYEHGHGTSSYNFNNNQPVVDYGLLQDIVPS 275

[Close]
BLAST of Cp4.1LG19g06270 vs. TAIR10
Match: AT5G49520.1 (AT5G49520.1 WRKY DNA-binding protein 48)

HSP 1 Score: 74.3 bits (181), Expect = 9.5e-14
Identity = 44/82 (53.66%), Postives = 52/82 (63.41%), Query Frame = 1 

Query: 46  LSSSDAGAEEDGSGKEK--EKAMKDMEDGGESSKAASYYRCTTPNCGVKKRVERSFQDPS 105
           L+ SD    +DG    K  +KA+K+      S    SYYRCTT  CGVKKRVERS  DPS
Sbjct: 212 LTKSDIDNLDDGYRWRKYGQKAVKN------SPYPRSYYRCTTVGCGVKKRVERSSDDPS 271

Query: 106 IVITTYEGQHNHPIAATLRGNL 126
           IV+TTYEGQH HP   T RG++
Sbjct: 272 IVMTTYEGQHTHPFPMTPRGHI 287

[Close]
BLAST of Cp4.1LG19g06270 vs. TAIR10
Match: AT5G46350.1 (AT5G46350.1 WRKY DNA-binding protein 8)

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-12
Identity = 62/187 (33.16%), Postives = 92/187 (49.20%), Query Frame = 1 

Query: 16  RDGGFGDSETARNFGVSNEISGTPMNSCGSLSSSDAGAEEDGSGKEK--EKAMKDMEDGG 75
           RDGG  D  + +      +           ++ ++    EDG    K  +KA+K+     
Sbjct: 144 RDGGEDDQRSQKVVKTKKKEEKKKEPRVSFMTKTEVDHLEDGYRWRKYGQKAVKN----- 203

Query: 76  ESSKAASYYRCTTPNCGVKKRVERSFQDPSIVITTYEGQHNHPIAATLRGNL---SAAAA 135
            S    SYYRCTT  C VKKRVERS+QDP++VITTYE QHNHPI    R  +   + A+ 
Sbjct: 204 -SPYPRSYYRCTTQKCNVKKRVERSYQDPTVVITTYESQHNHPIPTNRRTAMFSGTTASD 263

Query: 136 FPPS---MLAPMSVVGGAGFLPKPLSDPSGNSQVVGGDGYVYSQSSFGYPYNEQQSEYGV 195
           + PS   + + + +     F    L      S  V      Y Q   G  +++Q+SE+ +
Sbjct: 264 YNPSSSPIFSDLIINTPRSFSNDDLFRVPYASVNVNPS---YHQQQHG--FHQQESEFEL 319

[Close]
BLAST of Cp4.1LG19g06270 vs. TAIR10
Match: AT1G13960.1 (AT1G13960.1 WRKY DNA-binding protein 4)

HSP 1 Score: 70.1 bits (170), Expect = 1.8e-12
Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 1 

Query: 80  SYYRCTTPNCGVKKRVERSFQDPSIVITTYEGQHNHPIAATLRGNLSAAAA 131
           SYY+CTTP CGV+K VER+  DP  V+TTYEG+HNH + A    + +AAAA
Sbjct: 430 SYYKCTTPGCGVRKHVERAATDPKAVVTTYEGKHNHDLPAAKSSSHAAAAA 480

[Close]
BLAST of Cp4.1LG19g06270 vs. NCBI nr
Match: gi|659078320|ref|XP_008439664.1| (PREDICTED: probable WRKY transcription factor 71 [Cucumis melo])

HSP 1 Score: 181.8 bits (460), Expect = 1.2e-42
Identity = 103/161 (63.98%), Postives = 120/161 (74.53%), Query Frame = 1 

Query: 46  LSSSDAGAEEDGSGKEK--EKAMKDMEDGGESSKAASYYRCTTPNCGVKKRVERSFQDPS 105
           ++ S+    EDG    K  +KA+K+      S+   SYYRCTT  CGVKKRVERS++DPS
Sbjct: 107 MTKSEVDHLEDGYRWRKYGQKAVKN------SAYPRSYYRCTTQKCGVKKRVERSYEDPS 166

Query: 106 IVITTYEGQHNHPIAATLRGNLSAAA-AFPPSMLAPMSVVGGAGFLP-KPLSDPSGNSQV 165
           IVITTYEGQHNHPI ATLRGNLSAA+  FPPSML PM VVGG GFLP + LS+ S N+Q 
Sbjct: 167 IVITTYEGQHNHPIPATLRGNLSAASGTFPPSMLTPMPVVGGVGFLPAELLSNASSNNQA 226

Query: 166 VGGDGYVYSQSSFGYPYNEQQSEYGVLQDIFPSPSSFFNRQ 203
           VGG   VYS +SF Y YN +Q EYG+LQDIFP+PSSFFNRQ
Sbjct: 227 VGGGATVYSHNSFDYTYNGRQPEYGLLQDIFPAPSSFFNRQ 261

[Close]
BLAST of Cp4.1LG19g06270 vs. NCBI nr
Match: gi|789500073|ref|NP_001292668.1| (probable WRKY transcription factor 71 [Cucumis sativus])

HSP 1 Score: 177.6 bits (449), Expect = 2.3e-41
Identity = 106/187 (56.68%), Postives = 125/187 (66.84%), Query Frame = 1 

Query: 21  GDSETARNFGVSNEISGTPMNSCGS--LSSSDAGAEEDGSGKEK--EKAMKDMEDGGESS 80
           G+S  A   G S +         G   ++ S+    EDG    K  +KA+K+      S+
Sbjct: 80  GESSKAAGSGKSKKKGEKKEREAGVAFMTKSEVDHLEDGYRWRKYGQKAVKN------SA 139

Query: 81  KAASYYRCTTPNCGVKKRVERSFQDPSIVITTYEGQHNHPIAATLRGNLSAAAA-FPPSM 140
              SYYRCTT  CGVKKRVERS++DPSIVITTYEGQHNH I ATLRGNLSAA+  F PSM
Sbjct: 140 YPRSYYRCTTQKCGVKKRVERSYEDPSIVITTYEGQHNHLIPATLRGNLSAASGTFSPSM 199

Query: 141 LAPMSVVGGAGFLPKPLSDPSGNSQVVGGDGYVYSQSSFGYPYNEQQSEYGVLQDIFPSP 200
           L PM VVGG GFLP  LS  +GN+Q VGG   VYS ++F Y YN +Q EYG+LQDIFP+P
Sbjct: 200 LTPMPVVGGVGFLPAELSSNAGNNQAVGGGATVYSHNNFDYTYNGRQPEYGLLQDIFPAP 259

Query: 201 SSFFNRQ 203
           SSFFNRQ
Sbjct: 260 SSFFNRQ 260

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BLAST of Cp4.1LG19g06270 vs. NCBI nr
Match: gi|700194167|gb|KGN49371.1| (hypothetical protein Csa_6G522650 [Cucumis sativus])

HSP 1 Score: 173.7 bits (439), Expect = 3.3e-40
Identity = 119/261 (45.59%), Postives = 142/261 (54.41%), Query Frame = 1 

Query: 1   MSDEMFRDLFFSN------------------------------------PFRDGGFGDSE 60
           MSDEMF+DLF+S                                        D G G+ +
Sbjct: 1   MSDEMFKDLFYSGMDEYESIVRAFGITSDYSNINNEISGTTAMNSSCSLSSSDAGGGEED 60

Query: 61  TARNFGVSNEISGTPMNSCGSLSSSDAGA---EEDGSGKEKEKAMKDM--------EDG- 120
            +       +IS   +   G  SS  AG+   ++ G  KE+E  +  M        EDG 
Sbjct: 61  DSVK-EKEKQISKDVVEDNGGESSKAAGSGKSKKKGEKKEREARVAFMTKSEVDHLEDGY 120

Query: 121 ----------GESSKAASYYRCTTPNCGVKKRVERSFQDPSIVITTYEGQHNHPIAATLR 180
                       S+   SYYRCTT  CGVKKRVERS++DPSIVITTYEGQHNH I ATLR
Sbjct: 121 RWRKYGQKAVKNSAYPRSYYRCTTQKCGVKKRVERSYEDPSIVITTYEGQHNHLIPATLR 180

Query: 181 GNLSAAAA-FPPSMLAPMSVVGGAGFLPKPLSDPSGNSQVVGGDGYVYSQSSFGYPYNEQ 203
           GNLSAA+  F PSML PM VVGG GFLP  L   +GN+Q VGG   VYS ++F Y YN +
Sbjct: 181 GNLSAASGTFSPSMLTPMPVVGGVGFLPAELLSNAGNNQAVGGGATVYSHNNFDYTYNGR 240

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BLAST of Cp4.1LG19g06270 vs. NCBI nr
Match: gi|1003003158|gb|AMO00449.1| (WRKY transcription factor 81 [Manihot esculenta])

HSP 1 Score: 108.6 bits (270), Expect = 1.3e-20
Identity = 76/155 (49.03%), Postives = 93/155 (60.00%), Query Frame = 1 

Query: 46  LSSSDAGAEEDGSGKEK--EKAMKDMEDGGESSKAASYYRCTTPNCGVKKRVERSFQDPS 105
           ++ S+    EDG    K  +KA+K+      S    SYYRCTT  C VKKRVERSFQDPS
Sbjct: 170 MTKSEVDHLEDGYRWRKYGQKAVKN------SPYPRSYYRCTTQKCTVKKRVERSFQDPS 229

Query: 106 IVITTYEGQHNHPIAATLRGNLSAAAAFPPSMLAPMSVVGGAGFLPKPL---SDPSGNSQ 165
           IVITTYEGQHNH I ATLRGN  AAA F  SML P  +       P+       P   SQ
Sbjct: 230 IVITTYEGQHNHQIPATLRGN--AAAMFSHSMLTPNPLGSTRATFPQDFLAQMAPHIGSQ 289

Query: 166 VVGGDGYVYSQSSFGYPYNEQQ-SEYGVLQDIFPS 195
           +V G G +Y Q+   +P+++ Q  +YG+LQDI PS
Sbjct: 290 LVAGPGSIYPQNQ--HPHHQYQVPDYGLLQDIVPS 314

[Close]
BLAST of Cp4.1LG19g06270 vs. NCBI nr
Match: gi|590622865|ref|XP_007025165.1| (WRKY DNA-binding protein 28 [Theobroma cacao])

HSP 1 Score: 108.2 bits (269), Expect = 1.7e-20
Identity = 71/152 (46.71%), Postives = 91/152 (59.87%), Query Frame = 1 

Query: 46  LSSSDAGAEEDGSGKEK--EKAMKDMEDGGESSKAASYYRCTTPNCGVKKRVERSFQDPS 105
           ++ S+    EDG    K  +KA+K+      S    SYYRCTT  C VKKRVERSFQDPS
Sbjct: 154 MTKSEVDHLEDGYRWRKYGQKAVKN------SPYPRSYYRCTTQKCTVKKRVERSFQDPS 213

Query: 106 IVITTYEGQHNHPIAATLRGNLSAAAAFPPSMLAPMSVVGGAGFLPKPLSDPSGNSQVVG 165
           +VITTYEGQHNHP+  TLRG  SAA  FPPSML P  + G +      +  P   +   G
Sbjct: 214 VVITTYEGQHNHPLPTTLRG--SAAGLFPPSMLTPSPLAGPSFPHELFMQMPHHMNNQAG 273

Query: 166 GDGYVYSQSSFGY-PYNEQQSEYGVLQDIFPS 195
             G ++++S   +  Y+ Q  +YG+LQDI PS
Sbjct: 274 SAGSMFAESFSPFQQYHHQVPDYGLLQDIVPS 297

The following BLAST results are available for this feature:
BLAST of Cp4.1LG19g06270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
WRK28_ARATH1.4e-1942.77Probable WRKY transcription factor 28 OS=Arabidopsis thaliana GN=WRKY28 PE=2 SV=... [more]
WRK71_ARATH2.1e-1842.94Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=... [more]
WRK48_ARATH1.7e-1253.66Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=... [more]
WRKY8_ARATH1.9e-1133.16Probable WRKY transcription factor 8 OS=Arabidopsis thaliana GN=WRKY8 PE=1 SV=1[more]
WRKY4_ARATH3.2e-1158.82Probable WRKY transcription factor 4 OS=Arabidopsis thaliana GN=WRKY4 PE=1 SV=2[more]
BLAST of Cp4.1LG19g06270 vs. TrEMBL
Match NameE-valueIdentityDescription
E7CEY1_CUCSA1.6e-4156.68WRKY protein OS=Cucumis sativus GN=WRKY46 PE=2 SV=1[more]
A0A0A0KNS1_CUCSA2.3e-4045.59Uncharacterized protein OS=Cucumis sativus GN=Csa_6G522650 PE=4 SV=1[more]
A0A140H8T5_MANES9.0e-2149.03WRKY transcription factor 81 OS=Manihot esculenta PE=2 SV=1[more]
A0A061GF56_THECC1.2e-2046.71WRKY DNA-binding protein 28 OS=Theobroma cacao GN=TCM_029543 PE=4 SV=1[more]
B9S164_RICCO2.6e-2046.63WRKY transcription factor, putative OS=Ricinus communis GN=RCOM_0634190 PE=4 SV=... [more]
BLAST of Cp4.1LG19g06270 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G18170.18.0e-2142.77 WRKY DNA-binding protein 28[more]
AT1G29860.11.2e-1942.94 WRKY DNA-binding protein 71[more]
AT5G49520.19.5e-1453.66 WRKY DNA-binding protein 48[more]
AT5G46350.11.1e-1233.16 WRKY DNA-binding protein 8[more]
AT1G13960.11.8e-1258.82 WRKY DNA-binding protein 4[more]
BLAST of Cp4.1LG19g06270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659078320|ref|XP_008439664.1|1.2e-4263.98PREDICTED: probable WRKY transcription factor 71 [Cucumis melo][more]
gi|789500073|ref|NP_001292668.1|2.3e-4156.68probable WRKY transcription factor 71 [Cucumis sativus][more]
gi|700194167|gb|KGN49371.1|3.3e-4045.59hypothetical protein Csa_6G522650 [Cucumis sativus][more]
gi|1003003158|gb|AMO00449.1|1.3e-2049.03WRKY transcription factor 81 [Manihot esculenta][more]
gi|590622865|ref|XP_007025165.1|1.7e-2046.71WRKY DNA-binding protein 28 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003657WRKY_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG19g06270.1Cp4.1LG19g06270.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003657WRKY domainGENE3DG3DSA:2.20.25.80coord: 75..116
score: 1.8
IPR003657WRKY domainPFAMPF03106WRKYcoord: 75..116
score: 1.5
IPR003657WRKY domainSMARTSM00774WRKY_clscoord: 69..117
score: 6.3
IPR003657WRKY domainPROFILEPS50811WRKYcoord: 80..118
score: 16
IPR003657WRKY domainunknownSSF118290WRKY DNA-binding domaincoord: 78..117
score: 1.44
NoneNo IPR availablePANTHERPTHR31221FAMILY NOT NAMEDcoord: 80..194
score: 1.3
NoneNo IPR availablePANTHERPTHR31221:SF19WRKY TRANSCRIPTION FACTOR 28-RELATEDcoord: 80..194
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG19g06270Cucsa.047510Cucumber (Gy14) v1cgycpeB0039
Cp4.1LG19g06270CmaCh03G013780Cucurbita maxima (Rimu)cmacpeB667
Cp4.1LG19g06270CmaCh07G001320Cucurbita maxima (Rimu)cmacpeB880
Cp4.1LG19g06270CmoCh03G013740Cucurbita moschata (Rifu)cmocpeB618
Cp4.1LG19g06270Cla009748Watermelon (97103) v1cpewmB482
Cp4.1LG19g06270Csa6G522650Cucumber (Chinese Long) v2cpecuB503
Cp4.1LG19g06270MELO3C007157Melon (DHL92) v3.5.1cpemeB457
Cp4.1LG19g06270ClCG01G024340Watermelon (Charleston Gray)cpewcgB425
Cp4.1LG19g06270CSPI06G36040Wild cucumber (PI 183967)cpecpiB503
Cp4.1LG19g06270Lsi01G001760Bottle gourd (USVL1VR-Ls)cpelsiB396
Cp4.1LG19g06270MELO3C007157.2Melon (DHL92) v3.6.1cpemedB540
Cp4.1LG19g06270CsaV3_6G051490Cucumber (Chinese Long) v3cpecucB0618
Cp4.1LG19g06270Bhi03G000045Wax gourdcpewgoB0597
Cp4.1LG19g06270CsGy6G035450Cucumber (Gy14) v2cgybcpeB810
Cp4.1LG19g06270Carg23076Silver-seed gourdcarcpeB1326
Cp4.1LG19g06270Carg15396Silver-seed gourdcarcpeB0773
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG19g06270Cp4.1LG10g05720Cucurbita pepo (Zucchini)cpecpeB083
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG19g06270Silver-seed gourdcarcpeB0214
Cp4.1LG19g06270Silver-seed gourdcarcpeB1122
Cp4.1LG19g06270Cucumber (Chinese Long) v3cpecucB0587
Cp4.1LG19g06270Wax gourdcpewgoB0619
Cp4.1LG19g06270Cucurbita pepo (Zucchini)cpecpeB043
Cp4.1LG19g06270Cucurbita pepo (Zucchini)cpecpeB412
Cp4.1LG19g06270Cucumber (Gy14) v1cgycpeB0588
Cp4.1LG19g06270Cucurbita maxima (Rimu)cmacpeB232
Cp4.1LG19g06270Cucurbita maxima (Rimu)cmacpeB437
Cp4.1LG19g06270Cucurbita moschata (Rifu)cmocpeB199
Cp4.1LG19g06270Cucurbita moschata (Rifu)cmocpeB402
Cp4.1LG19g06270Cucurbita moschata (Rifu)cmocpeB817
Cp4.1LG19g06270Wild cucumber (PI 183967)cpecpiB476
Cp4.1LG19g06270Cucumber (Chinese Long) v2cpecuB475
Cp4.1LG19g06270Bottle gourd (USVL1VR-Ls)cpelsiB402
Cp4.1LG19g06270Watermelon (Charleston Gray)cpewcgB431
Cp4.1LG19g06270Watermelon (97103) v1cpewmB478
Cp4.1LG19g06270Melon (DHL92) v3.5.1cpemeB438
Cp4.1LG19g06270Cucumber (Gy14) v2cgybcpeB068
Cp4.1LG19g06270Melon (DHL92) v3.6.1cpemedB517