Cp4.1LG19g03360 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG19g03360
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionAldo-keto reductase family 4 member C9
LocationCp4.1LG19 : 2949407 .. 2950623 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAATACTCGGGTGGTTGGTATGAATTGCAAATTGGCATATTAACGTGCAGAGTTAAAAATGTTTGTAAGAACAAAATATATTAAAACATTTAAAAAATAATTAATATAAATGAAGGTTGAAGTTAATAATATGAACTATAATATGAATAAGAAGTTAAGAATGTTGTTCAAATTAACACCCAGTCAAGTTCTATTAAGGTTGAACTAAATTGTAATCAATTTTATACTAAGAAGAATTAAGTCTCATTTATGCAGCAATAACTTGAAGATACTCTAGACCGGACTTCATTTATTTTTAGATGGTTACATGATAAATGATTAAAATCTAGATTTATGGTGTTTGATTAATGTATTTTAAATTCTAAAACTTTTTATTTATTTTTAGGTTACATTTAGAGTGGCTAATTATGCTCATAAAATAGGAAGGTTATGTACTCTTGACTAGTGGAAGGTCAAAGGTTTCATTTTGACACTATATAAAACCATATATTTATCCTTGCAAATGAGACTTGAAAAATGCAGTAAGAATATTTGTGCTTTACTTTAGACAAGACGTTTAGATTACATGTTTGGAATCATGTAAACTTGACAAGATCAATTTTACTTGTGGACTGATTTGAATCTCAAATAAGTGTTTTTGCTTGAAATATTTGATCAACAAGGTAATTCAAGTATTACTTTCTCTTGGAGTGAAATCAAATTGATATGGGAGTTTGAGCATATGCGAATTAAGGGTTCGTGGGTTTGTGTATCCCAGCACTTACTAGGGTTCTTAAATTCAACTGACTAGAAATTTCTTATAATAATATTCTCACGTACTAACATCATTATCAGTATTACTTTAACAAATAATATTCATTCCATTACAACATTATGTCATTTTTTATTTCAATAAAGGTTGGATGAACAACTGAATTTTTAACCCTAAACATTGCAATAATAAATGACTTCCTATTTTTTACGTTTTACAATCGACTTAGAGAATAAAATATTGACGTGACATGTTGATTATAGATTGATTGGCGGTTTAGGATGAAACAAAGGTTGAGAGGGTTCGTCCCGAGGTCGTGGAACTATTTGTGTACGTCGGAAACATGGAATGGAATGGCGGGTTTGTATGCATTTGGACGAGCAAGAGCCATTGGTGTGAGCAATTTCTCAACAAAGAAGCTCTGGTTTTGTTCAAAACTGCAAAAGTTTGCAAGGAGCTGA

mRNA sequence

ATGATTGATTGGCGGTTTAGGATGAAACAAAGGTTGAGAGGGTTCGTCCCGAGGTCGTGGAACTATTTGTGTACGTCGGAAACATGGAATGGAATGGCGGGTTTGTATGCATTTGGACGAGCAAGAGCCATTGGTGTGAGCAATTTCTCAACAAAGAAGCTCTGGTTTTGTTCAAAACTGCAAAAGTTTGCAAGGAGCTGA

Coding sequence (CDS)

ATGATTGATTGGCGGTTTAGGATGAAACAAAGGTTGAGAGGGTTCGTCCCGAGGTCGTGGAACTATTTGTGTACGTCGGAAACATGGAATGGAATGGCGGGTTTGTATGCATTTGGACGAGCAAGAGCCATTGGTGTGAGCAATTTCTCAACAAAGAAGCTCTGGTTTTGTTCAAAACTGCAAAAGTTTGCAAGGAGCTGA

Protein sequence

MIDWRFRMKQRLRGFVPRSWNYLCTSETWNGMAGLYAFGRARAIGVSNFSTKKLWFCSKLQKFARS
Homology
[Close]
BLAST of Cp4.1LG19g03360 vs. Swiss-Prot
Match: AKRC9_ARATH (Aldo-keto reductase family 4 member C9 OS=Arabidopsis thaliana GN=AKR4C9 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 6.5e-06
Identity = 32/87 (36.78%), Postives = 41/87 (47.13%), Query Frame = 1 

Query: 1   MIDWRFRMKQRLRGFVPRSWNYLCTSETWNGMAGLYAFGRARAIGVSNFSTKKL------ 60
           +I W  R+K+   G  P +   +    TW  M  LY  G+ARAIGVSNFSTKKL      
Sbjct: 112 LIHWPARIKKGSVGIKPENLLPVDIPSTWKAMEALYDSGKARAIGVSNFSTKKLADLLEL 171

Query: 61  ---------------WFCSKLQKFARS 67
                          W  +KLQ+F +S
Sbjct: 172 ARVPPAVNQVECHPSWRQTKLQEFCKS 198

[Close]
BLAST of Cp4.1LG19g03360 vs. TrEMBL
Match: A0A0A0KXL5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296850 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 3.6e-11
Identity = 37/62 (59.68%), Postives = 41/62 (66.13%), Query Frame = 1 

Query: 1   MIDWRFRMKQRLRGFVPRSWNYLCTSETWNGMAGLYAFGRARAIGVSNFSTKKLWFCSKL 60
           +I W FR K   RGF P     LC +ETWN M GLYA G+ARAIGVSNFSTKKL    K+
Sbjct: 111 LIHWPFRTKHGSRGFAPEVMEPLCIAETWNAMEGLYASGQARAIGVSNFSTKKLQDLLKI 170

Query: 61  QK 63
            K
Sbjct: 171 AK 172

[Close]
BLAST of Cp4.1LG19g03360 vs. TrEMBL
Match: W9R1R9_9ROSA (Aldo-keto reductase family 4 member C9 OS=Morus notabilis GN=L484_016971 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 6.7e-10
Identity = 34/54 (62.96%), Postives = 37/54 (68.52%), Query Frame = 1 

Query: 1   MIDWRFRMKQRLRGFVPRSWNYLCTSETWNGMAGLYAFGRARAIGVSNFSTKKL 55
           +I W FR K   +GF P     LC  ETWN M GLYA GRA+AIGVSNFSTKKL
Sbjct: 116 LIHWPFRTKPGSQGFAPEVMAPLCLPETWNAMEGLYASGRAQAIGVSNFSTKKL 169

[Close]
BLAST of Cp4.1LG19g03360 vs. TrEMBL
Match: A0A072UAY8_MEDTR (Aldo/keto reductase family oxidoreductase OS=Medicago truncatula GN=MTR_7g063580 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.5e-09
Identity = 34/54 (62.96%), Postives = 38/54 (70.37%), Query Frame = 1 

Query: 1   MIDWRFRMKQRLRGFVPRSWNYLCTSETWNGMAGLYAFGRARAIGVSNFSTKKL 55
           +I W FR K   RG+ P     LC SETWN M GL+A G+ARAIGVSNFSTKKL
Sbjct: 152 LIHWPFRTKSGSRGWDPEVMVPLCLSETWNAMEGLFASGQARAIGVSNFSTKKL 205

[Close]
BLAST of Cp4.1LG19g03360 vs. TrEMBL
Match: A0A061EYR7_THECC (NAD(P)-linked oxidoreductase superfamily protein OS=Theobroma cacao GN=TCM_021861 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.6e-09
Identity = 33/54 (61.11%), Postives = 38/54 (70.37%), Query Frame = 1 

Query: 1   MIDWRFRMKQRLRGFVPRSWNYLCTSETWNGMAGLYAFGRARAIGVSNFSTKKL 55
           +I W FR K  +RG+ P     LC  ETW+ M GLYA G+ARAIGVSNFSTKKL
Sbjct: 116 LIHWPFRTKPGMRGWDPEIMAPLCLPETWSAMEGLYASGQARAIGVSNFSTKKL 169

[Close]
BLAST of Cp4.1LG19g03360 vs. TrEMBL
Match: A0A059A7A0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K03059 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.6e-09
Identity = 36/65 (55.38%), Postives = 40/65 (61.54%), Query Frame = 1 

Query: 1   MIDWRFRMKQRLRGFVPRSWNYLCTSETWNGMAGLYAFGRARAIGVSNFSTKKLWFCSKL 60
           +I W  R K   RGF P     LC  ETW  M GLYA G+ARAIGVSNFSTKKL     L
Sbjct: 122 LIHWPVRTKSGTRGFAPEDMVPLCLPETWTAMEGLYASGQARAIGVSNFSTKKL---QDL 181

Query: 61  QKFAR 66
            K+A+
Sbjct: 182 LKYAK 183

[Close]
BLAST of Cp4.1LG19g03360 vs. TAIR10
Match: AT2G37770.2 (AT2G37770.2 NAD(P)-linked oxidoreductase superfamily protein)

HSP 1 Score: 50.8 bits (120), Expect = 3.7e-07
Identity = 32/87 (36.78%), Postives = 41/87 (47.13%), Query Frame = 1 

Query: 1   MIDWRFRMKQRLRGFVPRSWNYLCTSETWNGMAGLYAFGRARAIGVSNFSTKKL------ 60
           +I W  R+K+   G  P +   +    TW  M  LY  G+ARAIGVSNFSTKKL      
Sbjct: 112 LIHWPARIKKGSVGIKPENLLPVDIPSTWKAMEALYDSGKARAIGVSNFSTKKLADLLEL 171

Query: 61  ---------------WFCSKLQKFARS 67
                          W  +KLQ+F +S
Sbjct: 172 ARVPPAVNQVECHPSWRQTKLQEFCKS 198

[Close]
BLAST of Cp4.1LG19g03360 vs. TAIR10
Match: AT2G37790.1 (AT2G37790.1 NAD(P)-linked oxidoreductase superfamily protein)

HSP 1 Score: 48.1 bits (113), Expect = 2.4e-06
Identity = 24/54 (44.44%), Postives = 31/54 (57.41%), Query Frame = 1 

Query: 1   MIDWRFRMKQRLRGFVPRSWNYLCTSETWNGMAGLYAFGRARAIGVSNFSTKKL 55
           +I W   +K+   GF P +        TW  M  L+  G+ARAIGVSNFS+KKL
Sbjct: 112 LIHWPVSLKKGSTGFKPENILPTDIPSTWKAMESLFDSGKARAIGVSNFSSKKL 165

[Close]
BLAST of Cp4.1LG19g03360 vs. TAIR10
Match: AT3G53880.1 (AT3G53880.1 NAD(P)-linked oxidoreductase superfamily protein)

HSP 1 Score: 47.8 bits (112), Expect = 3.1e-06
Identity = 24/54 (44.44%), Postives = 31/54 (57.41%), Query Frame = 1 

Query: 1   MIDWRFRMKQRLRGFVPRSWNYLCTSETWNGMAGLYAFGRARAIGVSNFSTKKL 55
           ++ W  R+K+    F P +   +    TW  M  L   G+ARAIGVSNFSTKKL
Sbjct: 112 LMHWPVRLKKGTVDFKPENIMPIDIPSTWKAMEALVDSGKARAIGVSNFSTKKL 165

[Close]
BLAST of Cp4.1LG19g03360 vs. NCBI nr
Match: gi|449448598|ref|XP_004142053.1| (PREDICTED: aldo-keto reductase family 4 member C9-like [Cucumis sativus])

HSP 1 Score: 75.1 bits (183), Expect = 5.1e-11
Identity = 37/62 (59.68%), Postives = 41/62 (66.13%), Query Frame = 1 

Query: 1   MIDWRFRMKQRLRGFVPRSWNYLCTSETWNGMAGLYAFGRARAIGVSNFSTKKLWFCSKL 60
           +I W FR K   RGF P     LC +ETWN M GLYA G+ARAIGVSNFSTKKL    K+
Sbjct: 111 LIHWPFRTKHGSRGFAPEVMEPLCIAETWNAMEGLYASGQARAIGVSNFSTKKLQDLLKI 170

Query: 61  QK 63
            K
Sbjct: 171 AK 172

[Close]
BLAST of Cp4.1LG19g03360 vs. NCBI nr
Match: gi|659069127|ref|XP_008448286.1| (PREDICTED: aldo-keto reductase family 4 member C9-like [Cucumis melo])

HSP 1 Score: 75.1 bits (183), Expect = 5.1e-11
Identity = 37/62 (59.68%), Postives = 41/62 (66.13%), Query Frame = 1 

Query: 1   MIDWRFRMKQRLRGFVPRSWNYLCTSETWNGMAGLYAFGRARAIGVSNFSTKKLWFCSKL 60
           +I W FR K   RGF P     LC +ETWN M GLYA G+ARAIGVSNFSTKKL    K+
Sbjct: 111 LIHWPFRTKHGSRGFAPEVMEPLCIAETWNAMEGLYASGQARAIGVSNFSTKKLQDLLKI 170

Query: 61  QK 63
            K
Sbjct: 171 AK 172

[Close]
BLAST of Cp4.1LG19g03360 vs. NCBI nr
Match: gi|703069736|ref|XP_010088579.1| (Aldo-keto reductase family 4 member C9 [Morus notabilis])

HSP 1 Score: 70.9 bits (172), Expect = 9.7e-10
Identity = 34/54 (62.96%), Postives = 37/54 (68.52%), Query Frame = 1 

Query: 1   MIDWRFRMKQRLRGFVPRSWNYLCTSETWNGMAGLYAFGRARAIGVSNFSTKKL 55
           +I W FR K   +GF P     LC  ETWN M GLYA GRA+AIGVSNFSTKKL
Sbjct: 116 LIHWPFRTKPGSQGFAPEVMAPLCLPETWNAMEGLYASGRAQAIGVSNFSTKKL 169

[Close]
BLAST of Cp4.1LG19g03360 vs. NCBI nr
Match: gi|922344108|ref|XP_013448973.1| (aldo/keto reductase family oxidoreductase [Medicago truncatula])

HSP 1 Score: 69.7 bits (169), Expect = 2.2e-09
Identity = 34/54 (62.96%), Postives = 38/54 (70.37%), Query Frame = 1 

Query: 1   MIDWRFRMKQRLRGFVPRSWNYLCTSETWNGMAGLYAFGRARAIGVSNFSTKKL 55
           +I W FR K   RG+ P     LC SETWN M GL+A G+ARAIGVSNFSTKKL
Sbjct: 152 LIHWPFRTKSGSRGWDPEVMVPLCLSETWNAMEGLFASGQARAIGVSNFSTKKL 205

[Close]
BLAST of Cp4.1LG19g03360 vs. NCBI nr
Match: gi|1021504525|ref|XP_016195577.1| (PREDICTED: aldo-keto reductase family 4 member C9-like [Arachis ipaensis])

HSP 1 Score: 69.3 bits (168), Expect = 2.8e-09
Identity = 33/54 (61.11%), Postives = 37/54 (68.52%), Query Frame = 1 

Query: 1   MIDWRFRMKQRLRGFVPRSWNYLCTSETWNGMAGLYAFGRARAIGVSNFSTKKL 55
           ++ W FR K   RG+ P     LC  ETWN M GLYA G+ARAIGVSNFSTKKL
Sbjct: 80  LMHWPFRTKPGSRGWAPEIMAPLCLPETWNAMEGLYASGQARAIGVSNFSTKKL 133

The following BLAST results are available for this feature:
BLAST of Cp4.1LG19g03360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AKRC9_ARATH6.5e-0636.78Aldo-keto reductase family 4 member C9 OS=Arabidopsis thaliana GN=AKR4C9 PE=1 SV... [more]
BLAST of Cp4.1LG19g03360 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXL5_CUCSA3.6e-1159.68Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296850 PE=4 SV=1[more]
W9R1R9_9ROSA6.7e-1062.96Aldo-keto reductase family 4 member C9 OS=Morus notabilis GN=L484_016971 PE=4 SV... [more]
A0A072UAY8_MEDTR1.5e-0962.96Aldo/keto reductase family oxidoreductase OS=Medicago truncatula GN=MTR_7g063580... [more]
A0A061EYR7_THECC2.6e-0961.11NAD(P)-linked oxidoreductase superfamily protein OS=Theobroma cacao GN=TCM_02186... [more]
A0A059A7A0_EUCGR2.6e-0955.38Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K03059 PE=4 SV=1[more]
BLAST of Cp4.1LG19g03360 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G37770.23.7e-0736.78 NAD(P)-linked oxidoreductase superfamily protein[more]
AT2G37790.12.4e-0644.44 NAD(P)-linked oxidoreductase superfamily protein[more]
AT3G53880.13.1e-0644.44 NAD(P)-linked oxidoreductase superfamily protein[more]
BLAST of Cp4.1LG19g03360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449448598|ref|XP_004142053.1|5.1e-1159.68PREDICTED: aldo-keto reductase family 4 member C9-like [Cucumis sativus][more]
gi|659069127|ref|XP_008448286.1|5.1e-1159.68PREDICTED: aldo-keto reductase family 4 member C9-like [Cucumis melo][more]
gi|703069736|ref|XP_010088579.1|9.7e-1062.96Aldo-keto reductase family 4 member C9 [Morus notabilis][more]
gi|922344108|ref|XP_013448973.1|2.2e-0962.96aldo/keto reductase family oxidoreductase [Medicago truncatula][more]
gi|1021504525|ref|XP_016195577.1|2.8e-0961.11PREDICTED: aldo-keto reductase family 4 member C9-like [Arachis ipaensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR023210NADP_OxRdtase_dom
IPR018170Aldo/ket_reductase_CS
IPR001395Aldo/keto reductase/potassium channel subunit beta
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006000 fructose metabolic process
biological_process GO:0006012 galactose metabolic process
biological_process GO:0046486 glycerolipid metabolic process
biological_process GO:0006013 mannose metabolic process
biological_process GO:0006090 pyruvate metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0004032 alditol:NADP+ 1-oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG19g03360.1Cp4.1LG19g03360.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001395Aldo/keto reductase/potassium channel subunit betaPANTHERPTHR11732ALDO/KETO REDUCTASEcoord: 17..54
score: 2.8
IPR018170Aldo/keto reductase, conserved sitePROSITEPS00062ALDOKETO_REDUCTASE_2coord: 32..49
scor
IPR023210NADP-dependent oxidoreductase domainGENE3DG3DSA:3.20.20.100coord: 25..54
score: 3.
IPR023210NADP-dependent oxidoreductase domainunknownSSF51430NAD(P)-linked oxidoreductasecoord: 20..59
score: 5.3
NoneNo IPR availablePANTHERPTHR11732:SF279SUBFAMILY NOT NAMEDcoord: 17..54
score: 2.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG19g03360MELO3C003158.2Melon (DHL92) v3.6.1cpemedB541
Cp4.1LG19g03360CsaV3_4G025340Cucumber (Chinese Long) v3cpecucB0611
Cp4.1LG19g03360Bhi03G001594Wax gourdcpewgoB0608
Cp4.1LG19g03360Carg19950Silver-seed gourdcarcpeB0790
Cp4.1LG19g03360Carg13233Silver-seed gourdcarcpeB0830
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG19g03360Cp4.1LG10g08480Cucurbita pepo (Zucchini)cpecpeB084
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG19g03360Cucumber (Chinese Long) v3cpecucB0594
Cp4.1LG19g03360Cucumber (Chinese Long) v3cpecucB0621
Cp4.1LG19g03360Wax gourdcpewgoB0591
Cp4.1LG19g03360Cucurbita pepo (Zucchini)cpecpeB382
Cp4.1LG19g03360Cucurbita pepo (Zucchini)cpecpeB416
Cp4.1LG19g03360Cucurbita pepo (Zucchini)cpecpeB429
Cp4.1LG19g03360Cucumber (Gy14) v1cgycpeB0099
Cp4.1LG19g03360Cucumber (Gy14) v1cgycpeB0486
Cp4.1LG19g03360Cucurbita maxima (Rimu)cmacpeB278
Cp4.1LG19g03360Cucurbita maxima (Rimu)cmacpeB668
Cp4.1LG19g03360Cucurbita maxima (Rimu)cmacpeB829
Cp4.1LG19g03360Cucurbita maxima (Rimu)cmacpeB880
Cp4.1LG19g03360Cucurbita moschata (Rifu)cmocpeB240
Cp4.1LG19g03360Cucurbita moschata (Rifu)cmocpeB619
Cp4.1LG19g03360Cucurbita moschata (Rifu)cmocpeB782
Cp4.1LG19g03360Cucurbita moschata (Rifu)cmocpeB817
Cp4.1LG19g03360Wild cucumber (PI 183967)cpecpiB481
Cp4.1LG19g03360Wild cucumber (PI 183967)cpecpiB497
Cp4.1LG19g03360Cucumber (Chinese Long) v2cpecuB480
Cp4.1LG19g03360Cucumber (Chinese Long) v2cpecuB496
Cp4.1LG19g03360Bottle gourd (USVL1VR-Ls)cpelsiB396
Cp4.1LG19g03360Bottle gourd (USVL1VR-Ls)cpelsiB404
Cp4.1LG19g03360Watermelon (Charleston Gray)cpewcgB422
Cp4.1LG19g03360Watermelon (Charleston Gray)cpewcgB432
Cp4.1LG19g03360Watermelon (97103) v1cpewmB474
Cp4.1LG19g03360Watermelon (97103) v1cpewmB485
Cp4.1LG19g03360Melon (DHL92) v3.5.1cpemeB442
Cp4.1LG19g03360Melon (DHL92) v3.5.1cpemeB460
Cp4.1LG19g03360Cucumber (Gy14) v2cgybcpeB373
Cp4.1LG19g03360Cucumber (Gy14) v2cgybcpeB532
Cp4.1LG19g03360Cucumber (Gy14) v2cgybcpeB812
Cp4.1LG19g03360Melon (DHL92) v3.6.1cpemedB522
Cp4.1LG19g03360Melon (DHL92) v3.6.1cpemedB525
Cp4.1LG19g03360Silver-seed gourdcarcpeB0227
Cp4.1LG19g03360Silver-seed gourdcarcpeB1390