Cp4.1LG19g03310 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG19g03310
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG19 : 2964447 .. 2964722 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGTCTCATTCCATTTGTTTACAAAGCCATTGTAGAGTTCAGAAATGGCAATAATAACCAACCCATGTGGTGCTGTGACTCTCCTTCTTCAGCTTCATATCAAAGACTCGCAGCCGATGATGATGAGCTACACAATATCAATGGGGCCTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCGAGTGACAGTGTCTTGATTTCTGGCTCTGGGGTTGATCAATCGCCGCTGTGTAATGGAGGAACATAG

mRNA sequence

ATGGAGGGTCTCATTCCATTTGTTTACAAAGCCATTGTAGAGTTCAGAAATGGCAATAATAACCAACCCATGTGGTGCTGTGACTCTCCTTCTTCAGCTTCATATCAAAGACTCGCAGCCGATGATGATGAGCTACACAATATCAATGGGGCCTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCGAGTGACAGTGTCTTGATTTCTGGCTCTGGGGTTGATCAATCGCCGCTGTGTAATGGAGGAACATAG

Coding sequence (CDS)

ATGGAGGGTCTCATTCCATTTGTTTACAAAGCCATTGTAGAGTTCAGAAATGGCAATAATAACCAACCCATGTGGTGCTGTGACTCTCCTTCTTCAGCTTCATATCAAAGACTCGCAGCCGATGATGATGAGCTACACAATATCAATGGGGCCTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCGAGTGACAGTGTCTTGATTTCTGGCTCTGGGGTTGATCAATCGCCGCTGTGTAATGGAGGAACATAG

Protein sequence

MEGLIPFVYKAIVEFRNGNNNQPMWCCDSPSSASYQRLAADDDELHNINGASSSSSSSSSSSSSSSSSSSSDSVLISGSGVDQSPLCNGGT
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG19g03310.1Cp4.1LG19g03310.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34670FAMILY NOT NAMEDcoord: 1..70
score: 1.1
NoneNo IPR availablePANTHERPTHR34670:SF3EXPRESSED PROTEINcoord: 1..70
score: 1.1

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG19g03310CmaCh07G010090Cucurbita maxima (Rimu)cmacpeB880
Cp4.1LG19g03310CmoCh07G010540Cucurbita moschata (Rifu)cmocpeB817
Cp4.1LG19g03310Carg01063Silver-seed gourdcarcpeB0227
Cp4.1LG19g03310Carg19949Silver-seed gourdcarcpeB0790
Cp4.1LG19g03310Carg13228Silver-seed gourdcarcpeB0830
Cp4.1LG19g03310Carg13825Silver-seed gourdcarcpeB1290
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG19g03310Melon (DHL92) v3.6.1cpemedB525
Cp4.1LG19g03310Melon (DHL92) v3.6.1cpemedB541
Cp4.1LG19g03310Silver-seed gourdcarcpeB1390
Cp4.1LG19g03310Cucumber (Chinese Long) v3cpecucB0594
Cp4.1LG19g03310Cucumber (Chinese Long) v3cpecucB0611
Cp4.1LG19g03310Wax gourdcpewgoB0591
Cp4.1LG19g03310Wax gourdcpewgoB0608
Cp4.1LG19g03310Cucurbita pepo (Zucchini)cpecpeB084
Cp4.1LG19g03310Cucurbita pepo (Zucchini)cpecpeB382
Cp4.1LG19g03310Cucurbita pepo (Zucchini)cpecpeB416
Cp4.1LG19g03310Cucurbita pepo (Zucchini)cpecpeB429
Cp4.1LG19g03310Cucumber (Gy14) v1cgycpeB0099
Cp4.1LG19g03310Cucumber (Gy14) v1cgycpeB0486
Cp4.1LG19g03310Cucurbita maxima (Rimu)cmacpeB278
Cp4.1LG19g03310Cucurbita maxima (Rimu)cmacpeB668
Cp4.1LG19g03310Cucurbita maxima (Rimu)cmacpeB829
Cp4.1LG19g03310Cucurbita moschata (Rifu)cmocpeB240
Cp4.1LG19g03310Cucurbita moschata (Rifu)cmocpeB619
Cp4.1LG19g03310Cucurbita moschata (Rifu)cmocpeB782
Cp4.1LG19g03310Wild cucumber (PI 183967)cpecpiB481
Cp4.1LG19g03310Wild cucumber (PI 183967)cpecpiB497
Cp4.1LG19g03310Cucumber (Chinese Long) v2cpecuB480
Cp4.1LG19g03310Cucumber (Chinese Long) v2cpecuB496
Cp4.1LG19g03310Bottle gourd (USVL1VR-Ls)cpelsiB396
Cp4.1LG19g03310Bottle gourd (USVL1VR-Ls)cpelsiB404
Cp4.1LG19g03310Watermelon (Charleston Gray)cpewcgB422
Cp4.1LG19g03310Watermelon (Charleston Gray)cpewcgB432
Cp4.1LG19g03310Watermelon (97103) v1cpewmB474
Cp4.1LG19g03310Watermelon (97103) v1cpewmB485
Cp4.1LG19g03310Melon (DHL92) v3.5.1cpemeB442
Cp4.1LG19g03310Melon (DHL92) v3.5.1cpemeB460
Cp4.1LG19g03310Cucumber (Gy14) v2cgybcpeB373
Cp4.1LG19g03310Cucumber (Gy14) v2cgybcpeB532
Cp4.1LG19g03310Cucumber (Gy14) v2cgybcpeB812